Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016317.01.T01 | XP_003601999.1 | 88.144 | 194 | 12 | 3 | 1 | 193 | 1 | 184 | 2.39E-120 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016317.01.T01 | Q9SGZ8 | 33.495 | 206 | 93 | 7 | 1 | 206 | 1 | 162 | 8.95E-23 | 92.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016317.01.T01 | G7J4C7 | 88.144 | 194 | 12 | 3 | 1 | 193 | 1 | 184 | 1.14e-120 | 349 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180005420.01 | MsG0380016317.01 | 0.816749 | 4.710205e-52 | 3.366096e-49 |
| MsG0380015486.01 | MsG0380016317.01 | 0.815565 | 8.661471e-52 | 5.992516e-49 |
| MsG0380016317.01 | MsG0480018232.01 | 0.810414 | 1.166517e-50 | 7.026868e-48 |
| MsG0380016317.01 | MsG0580024820.01 | 0.825814 | 3.818617e-54 | 3.518231e-51 |
| MsG0380016317.01 | MsG0880045690.01 | 0.816107 | 6.558243e-52 | 4.605253e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016317.01.T01 | MTR_3g087700 | 88.144 | 194 | 12 | 3 | 1 | 193 | 1 | 184 | 2.89e-124 | 349 |
| MsG0380016317.01.T01 | MTR_3g087700 | 85.714 | 154 | 11 | 3 | 1 | 153 | 1 | 144 | 3.86e-91 | 263 |
| MsG0380016317.01.T01 | MTR_3g073960 | 33.898 | 177 | 74 | 7 | 1 | 177 | 1 | 134 | 2.62e-21 | 86.3 |
| MsG0380016317.01.T01 | MTR_8g008840 | 53.571 | 56 | 25 | 1 | 127 | 181 | 32 | 87 | 2.70e-15 | 69.3 |
| MsG0380016317.01.T01 | MTR_4g099050 | 61.702 | 47 | 18 | 0 | 131 | 177 | 71 | 117 | 7.41e-15 | 69.3 |
| MsG0380016317.01.T01 | MTR_5g013770 | 50.704 | 71 | 29 | 2 | 131 | 196 | 83 | 152 | 1.83e-14 | 68.6 |
| MsG0380016317.01.T01 | MTR_8g022950 | 44.286 | 70 | 36 | 1 | 133 | 202 | 39 | 105 | 8.78e-14 | 65.5 |
| MsG0380016317.01.T01 | MTR_4g124930 | 54.902 | 51 | 22 | 1 | 127 | 177 | 172 | 221 | 1.28e-11 | 62.4 |
| MsG0380016317.01.T01 | MTR_2g436020 | 58.537 | 41 | 17 | 0 | 133 | 173 | 64 | 104 | 1.30e-11 | 60.5 |
| MsG0380016317.01.T01 | MTR_2g436250 | 58.537 | 41 | 17 | 0 | 133 | 173 | 64 | 104 | 1.30e-11 | 60.5 |
| MsG0380016317.01.T01 | MTR_4g124930 | 54.902 | 51 | 22 | 1 | 127 | 177 | 172 | 221 | 1.31e-11 | 62.0 |
| MsG0380016317.01.T01 | MTR_2g042970 | 40.741 | 81 | 45 | 2 | 101 | 179 | 152 | 231 | 2.22e-11 | 61.6 |
| MsG0380016317.01.T01 | MTR_4g120160 | 43.548 | 62 | 34 | 1 | 114 | 175 | 44 | 104 | 5.88e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016317.01.T01 | AT1G78020 | 33.495 | 206 | 93 | 7 | 1 | 206 | 1 | 162 | 9.12e-24 | 92.8 |
| MsG0380016317.01.T01 | AT1G22160 | 35.196 | 179 | 61 | 8 | 1 | 179 | 1 | 124 | 1.19e-19 | 81.6 |
| MsG0380016317.01.T01 | AT4G39795 | 45.833 | 72 | 36 | 1 | 112 | 183 | 55 | 123 | 6.14e-17 | 74.3 |
| MsG0380016317.01.T01 | AT4G17670 | 62.000 | 50 | 19 | 0 | 128 | 177 | 71 | 120 | 1.35e-16 | 73.9 |
| MsG0380016317.01.T01 | AT5G65040 | 51.389 | 72 | 31 | 1 | 114 | 185 | 42 | 109 | 1.66e-16 | 72.8 |
| MsG0380016317.01.T01 | AT2G44670 | 62.000 | 50 | 18 | 1 | 131 | 179 | 14 | 63 | 6.20e-16 | 70.5 |
| MsG0380016317.01.T01 | AT5G47060 | 63.830 | 47 | 17 | 0 | 131 | 177 | 95 | 141 | 5.75e-15 | 70.1 |
| MsG0380016317.01.T01 | AT5G47060 | 63.830 | 47 | 17 | 0 | 131 | 177 | 95 | 141 | 5.75e-15 | 70.1 |
| MsG0380016317.01.T01 | AT1G53885 | 48.529 | 68 | 33 | 1 | 109 | 176 | 20 | 85 | 1.78e-12 | 62.4 |
| MsG0380016317.01.T01 | AT1G53903 | 48.529 | 68 | 33 | 1 | 109 | 176 | 20 | 85 | 1.78e-12 | 62.4 |
| MsG0380016317.01.T01 | AT1G74940 | 45.902 | 61 | 32 | 1 | 132 | 192 | 149 | 208 | 5.34e-11 | 60.1 |
| MsG0380016317.01.T01 | AT1G19200 | 49.091 | 55 | 27 | 1 | 126 | 180 | 143 | 196 | 5.38e-11 | 60.1 |
| MsG0380016317.01.T01 | AT5G49120 | 39.130 | 69 | 42 | 0 | 105 | 173 | 40 | 108 | 5.89e-11 | 58.9 |
| MsG0380016317.01.T01 | AT1G19200 | 49.091 | 55 | 27 | 1 | 126 | 180 | 156 | 209 | 6.44e-11 | 60.1 |
Find 50 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTGTTCTTCTCATAAT+TGG | 0.156033 | 3:+81919134 | None:intergenic |
| CTTCCTCATGATGGGATTCT+AGG | 0.211376 | 3:+81919060 | None:intergenic |
| AATAATATTGTTAGTGTTTG+TGG | 0.326456 | 3:+81918848 | None:intergenic |
| AGTTACAGAGGCCACAAGTT+TGG | 0.349033 | 3:+81918760 | None:intergenic |
| ATGATGGGATTCTAGGTTGT+TGG | 0.366587 | 3:+81919067 | None:intergenic |
| ACAAGCAGCAGTAGAAGCTT+TGG | 0.372677 | 3:+81918125 | None:intergenic |
| TCTAGGTTGTTGGTTTGATC+AGG | 0.381479 | 3:+81919077 | None:intergenic |
| ATTGTTAGTGTTTGTGGCTG+TGG | 0.394454 | 3:+81918854 | None:intergenic |
| TGTAACTGTCGTTTGGCTCC+TGG | 0.404985 | 3:-81918744 | MsG0380016317.01.T01:CDS |
| TACACGGTGGTCTTCTTTGT+TGG | 0.433148 | 3:+81918170 | None:intergenic |
| TGGCCTCTGTAACTGTCGTT+TGG | 0.455985 | 3:-81918751 | MsG0380016317.01.T01:CDS |
| CTTGTTCTTCTCATAATTGG+TGG | 0.464977 | 3:+81919137 | None:intergenic |
| CACTGATTCTTCCTCATGAT+GGG | 0.470672 | 3:+81919052 | None:intergenic |
| GATTAGAAGAACATGTTGCT+TGG | 0.489313 | 3:-81919173 | None:intergenic |
| GATGGCTGATGAACGTTTAG+TGG | 0.489958 | 3:-81918907 | MsG0380016317.01.T01:CDS |
| TCACTGATTCTTCCTCATGA+TGG | 0.491322 | 3:+81919051 | None:intergenic |
| AAGACAAAAGAAAAGAAAAG+TGG | 0.499141 | 3:-81918206 | MsG0380016317.01.T01:CDS |
| GTTCCCATCACAACCGTATG+TGG | 0.501901 | 3:+81918957 | None:intergenic |
| GAATCCACATACGGTTGTGA+TGG | 0.509624 | 3:-81918961 | MsG0380016317.01.T01:CDS |
| TGATCATCATGGTGTGGATG+TGG | 0.510086 | 3:+81919005 | None:intergenic |
| GTGGCTGTGGCTGTGTGTGA+AGG | 0.511685 | 3:+81918867 | None:intergenic |
| GTCGAGACATCTACATGTAT+AGG | 0.522956 | 3:-81918722 | MsG0380016317.01.T01:intron |
| ATCAGGTGGTTGCATGTCCA+CGG | 0.524115 | 3:+81919094 | None:intergenic |
| AAGAAAAGAAAAGTGGAAGA+TGG | 0.529987 | 3:-81918199 | MsG0380016317.01.T01:CDS |
| CTTCTCATAATTGGTGGTCG+AGG | 0.540724 | 3:+81919143 | None:intergenic |
| AGGTTGTTGGTTTGATCAGG+TGG | 0.542107 | 3:+81919080 | None:intergenic |
| TGGCTGTGGCTGTGTGTGAA+GGG | 0.543537 | 3:+81918868 | None:intergenic |
| TGCCATGTTCTTGATCATCA+TGG | 0.545211 | 3:+81918994 | None:intergenic |
| AGCAGTAGAAGCTTTGGCAG+TGG | 0.548192 | 3:+81918131 | None:intergenic |
| GCTTTGGCAGTGGCCGTGCA+CGG | 0.562038 | 3:+81918141 | None:intergenic |
| TCATGTGCACTCACACTCAA+AGG | 0.576185 | 3:+81918810 | None:intergenic |
| CCGTGTATCACCACCGTGCA+CGG | 0.577796 | 3:-81918154 | MsG0380016317.01.T01:CDS |
| AATCCACATACGGTTGTGAT+GGG | 0.578470 | 3:-81918960 | MsG0380016317.01.T01:CDS |
| CCTCACTTTCTCCAAACTTG+TGG | 0.579241 | 3:-81918771 | MsG0380016317.01.T01:CDS |
| CCGTGCACGGTGGTGATACA+CGG | 0.602872 | 3:+81918154 | None:intergenic |
| CACCATGATGATCAAGAACA+TGG | 0.605152 | 3:-81918996 | MsG0380016317.01.T01:CDS |
| TGGTGTGGATGTGGCTGCAG+AGG | 0.618105 | 3:+81919014 | None:intergenic |
| ATGGCTGATGAACGTTTAGT+GGG | 0.621978 | 3:-81918906 | MsG0380016317.01.T01:CDS |
| CCACAAGTTTGGAGAAAGTG+AGG | 0.629285 | 3:+81918771 | None:intergenic |
| TGTTCTTGATCATCATGGTG+TGG | 0.629577 | 3:+81918999 | None:intergenic |
| CAACATCAAGAATCCACATA+CGG | 0.631823 | 3:-81918970 | MsG0380016317.01.T01:CDS |
| CATGAGTGGTGGTTTGTCCG+TGG | 0.637137 | 3:-81919111 | MsG0380016317.01.T01:CDS |
| AGAAGAACAAGAAGCATGAG+TGG | 0.643370 | 3:-81919125 | MsG0380016317.01.T01:CDS |
| TACATGTAGATGTCTCGACC+AGG | 0.645212 | 3:+81918726 | None:intergenic |
| CGTTAAAAGTGAATTAACGA+TGG | 0.660105 | 3:-81918925 | MsG0380016317.01.T01:CDS |
| CAACCTAGAATCCCATCATG+AGG | 0.662994 | 3:-81919063 | MsG0380016317.01.T01:CDS |
| TTGGCAGTGGCCGTGCACGG+TGG | 0.682224 | 3:+81918144 | None:intergenic |
| GAGCCAAACGACAGTTACAG+AGG | 0.685876 | 3:+81918748 | None:intergenic |
| AGAACAAGAAGCATGAGTGG+TGG | 0.691730 | 3:-81919122 | MsG0380016317.01.T01:CDS |
| TGCACGGTGGTGATACACGG+TGG | 0.754526 | 3:+81918157 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGAATAATAGAAAAAAA+TGG | + | Chr3:81918591-81918610 | None:intergenic | 10.0% |
| !!! | TTAATTAATTTTTTGTTTAG+AGG | - | Chr3:81918928-81918947 | MsG0380016317.01.T01:CDS | 10.0% |
| !! | GTTAGTTAGTATAATTAATT+TGG | - | Chr3:81918959-81918978 | MsG0380016317.01.T01:CDS | 15.0% |
| !!! | AAAGAAAATTATTGATTTCA+GGG | - | Chr3:81919003-81919022 | MsG0380016317.01.T01:CDS | 15.0% |
| !! | AATAATATTGTTAGTGTTTG+TGG | + | Chr3:81918435-81918454 | None:intergenic | 20.0% |
| !! | GTAAATATTAATTCTTCCTT+TGG | + | Chr3:81918818-81918837 | None:intergenic | 20.0% |
| !!! | AAGAAAATTATTGATTTCAG+GGG | - | Chr3:81919004-81919023 | MsG0380016317.01.T01:CDS | 20.0% |
| !!! | GAAAGAAAATTATTGATTTC+AGG | - | Chr3:81919002-81919021 | MsG0380016317.01.T01:CDS | 20.0% |
| ! | AAGACAAAAGAAAAGAAAAG+TGG | - | Chr3:81919074-81919093 | MsG0380016317.01.T01:CDS | 25.0% |
| ! | CTGAAAATAAAGAGACAATT+AGG | + | Chr3:81918788-81918807 | None:intergenic | 25.0% |
| ! | TAAACAAGAATATCAAAGTC+AGG | - | Chr3:81918698-81918717 | MsG0380016317.01.T01:intron | 25.0% |
| !! | TGACTTTGATATTCTTGTTT+AGG | + | Chr3:81918699-81918718 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTAGAGGAAATTG+TGG | - | Chr3:81918937-81918956 | MsG0380016317.01.T01:CDS | 25.0% |
| AAGAAAAGAAAAGTGGAAGA+TGG | - | Chr3:81919081-81919100 | MsG0380016317.01.T01:CDS | 30.0% | |
| ACTAACCATAAGAGTTAGTT+AGG | - | Chr3:81918725-81918744 | MsG0380016317.01.T01:CDS | 30.0% | |
| CGTTAAAAGTGAATTAACGA+TGG | - | Chr3:81918355-81918374 | MsG0380016317.01.T01:intron | 30.0% | |
| CTTCTTGTTCTTCTCATAAT+TGG | + | Chr3:81918149-81918168 | None:intergenic | 30.0% | |
| TTCATTCTAGTAGTTTGACT+AGG | - | Chr3:81918847-81918866 | MsG0380016317.01.T01:CDS | 30.0% | |
| TTGAACCTAACTAACTCTTA+TGG | + | Chr3:81918733-81918752 | None:intergenic | 30.0% | |
| !! | TATTTTCAGTATCGAACCAA+AGG | - | Chr3:81918799-81918818 | MsG0380016317.01.T01:CDS | 30.0% |
| AGACATCTACATGTATAGGT+AGG | - | Chr3:81918562-81918581 | MsG0380016317.01.T01:intron | 35.0% | |
| CAACATCAAGAATCCACATA+CGG | - | Chr3:81918310-81918329 | MsG0380016317.01.T01:intron | 35.0% | |
| CTTGTTCTTCTCATAATTGG+TGG | + | Chr3:81918146-81918165 | None:intergenic | 35.0% | |
| ! | AGATACAGCATTTTGCAGTT+TGG | - | Chr3:81919027-81919046 | MsG0380016317.01.T01:CDS | 35.0% |
| ! | TTTTACCTTTGACTGAACTC+CGG | + | Chr3:81918672-81918691 | None:intergenic | 35.0% |
| AATCCACATACGGTTGTGAT+GGG | - | Chr3:81918320-81918339 | MsG0380016317.01.T01:intron | 40.0% | |
| ATGGCTGATGAACGTTTAGT+GGG | - | Chr3:81918374-81918393 | MsG0380016317.01.T01:intron | 40.0% | |
| ATTGTTAGTGTTTGTGGCTG+TGG | + | Chr3:81918429-81918448 | None:intergenic | 40.0% | |
| CACCATGATGATCAAGAACA+TGG | - | Chr3:81918284-81918303 | MsG0380016317.01.T01:intron | 40.0% | |
| GTCGAGACATCTACATGTAT+AGG | - | Chr3:81918558-81918577 | MsG0380016317.01.T01:intron | 40.0% | |
| TGCCATGTTCTTGATCATCA+TGG | + | Chr3:81918289-81918308 | None:intergenic | 40.0% | |
| TGTTCTTGATCATCATGGTG+TGG | + | Chr3:81918284-81918303 | None:intergenic | 40.0% | |
| ! | AGAAGAACAAGAAGCATGAG+TGG | - | Chr3:81918155-81918174 | MsG0380016317.01.T01:CDS | 40.0% |
| ! | ATGATGGGATTCTAGGTTGT+TGG | + | Chr3:81918216-81918235 | None:intergenic | 40.0% |
| !! | ATTTTGCAGTTTGGAGTGCA+GGG | - | Chr3:81919036-81919055 | MsG0380016317.01.T01:CDS | 40.0% |
| !! | CACTGATTCTTCCTCATGAT+GGG | + | Chr3:81918231-81918250 | None:intergenic | 40.0% |
| !! | TCACTGATTCTTCCTCATGA+TGG | + | Chr3:81918232-81918251 | None:intergenic | 40.0% |
| !! | TCTAGGTTGTTGGTTTGATC+AGG | + | Chr3:81918206-81918225 | None:intergenic | 40.0% |
| ACAAGCAGCAGTAGAAGCTT+TGG | + | Chr3:81919158-81919177 | None:intergenic | 45.0% | |
| AGTTACAGAGGCCACAAGTT+TGG | + | Chr3:81918523-81918542 | None:intergenic | 45.0% | |
| CAACCTAGAATCCCATCATG+AGG | - | Chr3:81918217-81918236 | MsG0380016317.01.T01:CDS | 45.0% | |
| CCACAAGTTTGGAGAAAGTG+AGG | + | Chr3:81918512-81918531 | None:intergenic | 45.0% | |
| CCTCACTTTCTCCAAACTTG+TGG | - | Chr3:81918509-81918528 | MsG0380016317.01.T01:intron | 45.0% | |
| GAAATCCGGAGTTCAGTCAA+AGG | - | Chr3:81918664-81918683 | MsG0380016317.01.T01:intron | 45.0% | |
| GAATCCACATACGGTTGTGA+TGG | - | Chr3:81918319-81918338 | MsG0380016317.01.T01:intron | 45.0% | |
| GATGGCTGATGAACGTTTAG+TGG | - | Chr3:81918373-81918392 | MsG0380016317.01.T01:intron | 45.0% | |
| TACACGGTGGTCTTCTTTGT+TGG | + | Chr3:81919113-81919132 | None:intergenic | 45.0% | |
| TACATGTAGATGTCTCGACC+AGG | + | Chr3:81918557-81918576 | None:intergenic | 45.0% | |
| TCATGTGCACTCACACTCAA+AGG | + | Chr3:81918473-81918492 | None:intergenic | 45.0% | |
| TGATCATCATGGTGTGGATG+TGG | + | Chr3:81918278-81918297 | None:intergenic | 45.0% | |
| TGTAAACCCTACTCTGCCTA+GGG | - | Chr3:81918626-81918645 | MsG0380016317.01.T01:intron | 45.0% | |
| ! | AGAACAAGAAGCATGAGTGG+TGG | - | Chr3:81918158-81918177 | MsG0380016317.01.T01:CDS | 45.0% |
| ! | CTTCCTCATGATGGGATTCT+AGG | + | Chr3:81918223-81918242 | None:intergenic | 45.0% |
| ! | CTTCTCATAATTGGTGGTCG+AGG | + | Chr3:81918140-81918159 | None:intergenic | 45.0% |
| !! | AGGTTGTTGGTTTGATCAGG+TGG | + | Chr3:81918203-81918222 | None:intergenic | 45.0% |
| !! | CATTTTGCAGTTTGGAGTGC+AGG | - | Chr3:81919035-81919054 | MsG0380016317.01.T01:CDS | 45.0% |
| AAGGCAGAGCCTTCGAAATC+CGG | - | Chr3:81918650-81918669 | MsG0380016317.01.T01:intron | 50.0% | |
| ATCAGGTGGTTGCATGTCCA+CGG | + | Chr3:81918189-81918208 | None:intergenic | 50.0% | |
| GACTGAACTCCGGATTTCGA+AGG | + | Chr3:81918662-81918681 | None:intergenic | 50.0% | |
| GAGCCAAACGACAGTTACAG+AGG | + | Chr3:81918535-81918554 | None:intergenic | 50.0% | |
| GTGTAAACCCTACTCTGCCT+AGG | - | Chr3:81918625-81918644 | MsG0380016317.01.T01:intron | 50.0% | |
| GTTCCCATCACAACCGTATG+TGG | + | Chr3:81918326-81918345 | None:intergenic | 50.0% | |
| TGGCCTCTGTAACTGTCGTT+TGG | - | Chr3:81918529-81918548 | MsG0380016317.01.T01:intron | 50.0% | |
| ! | AGCAGTAGAAGCTTTGGCAG+TGG | + | Chr3:81919152-81919171 | None:intergenic | 50.0% |
| ! | TGTAACTGTCGTTTGGCTCC+TGG | - | Chr3:81918536-81918555 | MsG0380016317.01.T01:intron | 50.0% |
| TGGCTGTGGCTGTGTGTGAA+GGG | + | Chr3:81918415-81918434 | None:intergenic | 55.0% | |
| ! | CATGAGTGGTGGTTTGTCCG+TGG | - | Chr3:81918169-81918188 | MsG0380016317.01.T01:CDS | 55.0% |
| ACCCTACTCTGCCTAGGGCA+AGG | - | Chr3:81918631-81918650 | MsG0380016317.01.T01:intron | 60.0% | |
| CCGTGCACGGTGGTGATACA+CGG | + | Chr3:81919129-81919148 | None:intergenic | 60.0% | |
| CCGTGTATCACCACCGTGCA+CGG | - | Chr3:81919126-81919145 | MsG0380016317.01.T01:CDS | 60.0% | |
| GCCTTGCCCTAGGCAGAGTA+GGG | + | Chr3:81918635-81918654 | None:intergenic | 60.0% | |
| GTGGCTGTGGCTGTGTGTGA+AGG | + | Chr3:81918416-81918435 | None:intergenic | 60.0% | |
| TGCACGGTGGTGATACACGG+TGG | + | Chr3:81919126-81919145 | None:intergenic | 60.0% | |
| TGCCTTGCCCTAGGCAGAGT+AGG | + | Chr3:81918636-81918655 | None:intergenic | 60.0% | |
| TGGTGTGGATGTGGCTGCAG+AGG | + | Chr3:81918269-81918288 | None:intergenic | 60.0% | |
| CGAAGGCTCTGCCTTGCCCT+AGG | + | Chr3:81918645-81918664 | None:intergenic | 65.0% | |
| GCTTTGGCAGTGGCCGTGCA+CGG | + | Chr3:81919142-81919161 | None:intergenic | 65.0% | |
| TTGGCAGTGGCCGTGCACGG+TGG | + | Chr3:81919139-81919158 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 81918119 | 81919183 | 81918119 | ID=MsG0380016317.01;Name=MsG0380016317.01 |
| Chr3 | mRNA | 81918119 | 81919183 | 81918119 | ID=MsG0380016317.01.T01;Parent=MsG0380016317.01;Name=MsG0380016317.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|206 |
| Chr3 | exon | 81918723 | 81919183 | 81918723 | ID=MsG0380016317.01.T01:exon:11667;Parent=MsG0380016317.01.T01 |
| Chr3 | exon | 81918119 | 81918278 | 81918119 | ID=MsG0380016317.01.T01:exon:11666;Parent=MsG0380016317.01.T01 |
| Chr3 | CDS | 81918723 | 81919183 | 81918723 | ID=MsG0380016317.01.T01:cds;Parent=MsG0380016317.01.T01 |
| Chr3 | CDS | 81918119 | 81918278 | 81918119 | ID=MsG0380016317.01.T01:cds;Parent=MsG0380016317.01.T01 |
| Gene Sequence |
| Protein sequence |
