Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045715.01.T01 | AET03900.1 | 69.153 | 590 | 61 | 4 | 1 | 520 | 1 | 539 | 0 | 664 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045715.01.T01 | G7LDY5 | 69.153 | 590 | 61 | 4 | 1 | 520 | 1 | 539 | 0.0 | 664 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480020997.01 | MsG0880045715.01 | PPI |
| MsG0280011022.01 | MsG0880045715.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045715.01.T01 | MTR_8g077340 | 69.153 | 590 | 61 | 4 | 1 | 520 | 1 | 539 | 0.0 | 664 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045715.01.T01 | AT2G18340 | 30.189 | 477 | 258 | 12 | 42 | 500 | 33 | 452 | 3.66e-11 | 65.9 |
Find 130 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTATCTTTAGCATTAT+TGG | 0.097673 | 8:-63170289 | None:intergenic |
| TTCTTTATCTTTAGCATTAT+TGG | 0.097673 | 8:-63170376 | None:intergenic |
| GCCTCAAAGGCCACAGATTC+AGG | 0.177634 | 8:+63169379 | MsG0880045715.01.T01:CDS |
| GGCCTTTGGATTTCGTTTCT+TGG | 0.193418 | 8:-63169983 | None:intergenic |
| ATGTTTCGGCCGTTATAATT+AGG | 0.246029 | 8:+63170947 | MsG0880045715.01.T01:three_prime_UTR |
| TCCAACTGCACCCGAGGCCT+TGG | 0.263118 | 8:-63170607 | None:intergenic |
| TCCAGCTGCATCCGAGGCCT+TGG | 0.270678 | 8:-63170172 | None:intergenic |
| TCCACCTACTTCCGGGGCCT+TGG | 0.273004 | 8:-63169728 | None:intergenic |
| TCCAGCTGCATCTGAGGCCT+TGG | 0.276584 | 8:-63170259 | None:intergenic |
| CTTTATTACCACCTGCTTCC+GGG | 0.276984 | 8:-63170005 | None:intergenic |
| TCTTTATTACCACCTGCTTC+CGG | 0.285383 | 8:-63170006 | None:intergenic |
| GCTTTATTTCCACCTACTTC+CGG | 0.290103 | 8:-63169736 | None:intergenic |
| GCTTTATTTCCACCTACTTC+CGG | 0.290103 | 8:-63170528 | None:intergenic |
| CCCTGAATCTGTGGCCTTTG+AGG | 0.291421 | 8:-63169380 | None:intergenic |
| AAATGCAAAATTTGTCTTGT+TGG | 0.293483 | 8:+63169001 | MsG0880045715.01.T01:CDS |
| CTTTATTTCCACCTACTTCC+GGG | 0.306933 | 8:-63169735 | None:intergenic |
| CTTTATTTCCACCTACTTCC+GGG | 0.306933 | 8:-63170527 | None:intergenic |
| CCACCTGCTTCCGGGGCCTT+TGG | 0.311200 | 8:-63169997 | None:intergenic |
| TCCAACTGCATCCGAGGTCT+TGG | 0.318861 | 8:-63170433 | None:intergenic |
| AATTGTTCTCATAGACATTT+CGG | 0.320051 | 8:+63169301 | MsG0880045715.01.T01:intron |
| GATAAAGAAAATAGTGCATC+TGG | 0.322305 | 8:+63170303 | MsG0880045715.01.T01:CDS |
| CCATATAGCCGCTGCTGATC+AGG | 0.338715 | 8:+63169495 | MsG0880045715.01.T01:intron |
| CCACCTACTTCCGGGGCCTT+AGG | 0.357844 | 8:-63170519 | None:intergenic |
| CGATAGGTATCAGTGAAATA+TGG | 0.366522 | 8:+63170912 | MsG0880045715.01.T01:three_prime_UTR |
| TACAATAATACCATAGGCTT+AGG | 0.370695 | 8:+63170849 | MsG0880045715.01.T01:three_prime_UTR |
| TGCTCCAACAATATGAATCT+TGG | 0.371518 | 8:-63170800 | None:intergenic |
| GGAGAGTTTCTGTAATGTTT+CGG | 0.377546 | 8:+63170933 | MsG0880045715.01.T01:three_prime_UTR |
| CCACCTACTTCCGGGGCCTT+GGG | 0.381111 | 8:-63169727 | None:intergenic |
| GCTAAAGCAGGCGGTGCATA+TGG | 0.388330 | 8:+63169955 | MsG0880045715.01.T01:CDS |
| GATAAAGAAAATAGCGCATC+TGG | 0.392610 | 8:+63169859 | MsG0880045715.01.T01:CDS |
| GATAAAGAAAATAGTGCATC+TGG | 0.393061 | 8:+63169772 | MsG0880045715.01.T01:CDS |
| ATTTCCAAGATTCATATTGT+TGG | 0.397181 | 8:+63170796 | MsG0880045715.01.T01:three_prime_UTR |
| AACAAAAGGAGCAGCTGATC+AGG | 0.398629 | 8:+63169549 | MsG0880045715.01.T01:CDS |
| AACAAAAGGAGCAGCTGATC+AGG | 0.398629 | 8:+63169603 | MsG0880045715.01.T01:CDS |
| CCAGCTGCATCCGAGGCCTT+GGG | 0.399647 | 8:-63170171 | None:intergenic |
| GAAAGAAAAGCCCAAGGCCT+CGG | 0.402206 | 8:+63170596 | MsG0880045715.01.T01:CDS |
| CCAACTGCACCCGAGGCCTT+GGG | 0.402344 | 8:-63170606 | None:intergenic |
| CCAGCTGCATCTGAGGCCTT+GGG | 0.414281 | 8:-63170258 | None:intergenic |
| TCCAACTGCATCGGAGGCAT+TGG | 0.415313 | 8:-63170694 | None:intergenic |
| TTCTTTATCTTTAGCAACAT+TGG | 0.416336 | 8:-63170115 | None:intergenic |
| TTCTTTATCTTTAGCAACAT+TGG | 0.416336 | 8:-63170202 | None:intergenic |
| TTCTTTATCTTTAGCAACAT+TGG | 0.416336 | 8:-63170463 | None:intergenic |
| GATAAAGAAAATAATGCATC+TGG | 0.428421 | 8:+63170390 | MsG0880045715.01.T01:CDS |
| GATAAAGAAAATAATGCATC+TGG | 0.428421 | 8:+63170564 | MsG0880045715.01.T01:CDS |
| AATCCAAAGGCCCCGGAAGC+AGG | 0.430052 | 8:+63169994 | MsG0880045715.01.T01:CDS |
| CCCAAGGCCTCGGATGCAGC+TGG | 0.431675 | 8:+63170171 | MsG0880045715.01.T01:CDS |
| GGCCTTAGGATTTCTGTGCT+TGG | 0.432119 | 8:-63170505 | None:intergenic |
| TGTATCTCCTACTGAGTCTT+GGG | 0.438610 | 8:-63170771 | None:intergenic |
| CCGAAGGCCTCGGATGCAGC+TGG | 0.439921 | 8:+63170084 | MsG0880045715.01.T01:CDS |
| TTCTTTATCTTTAGCAACAT+TGG | 0.444772 | 8:-63170637 | None:intergenic |
| CCCAAGGCCTCGGGTGCAGT+TGG | 0.446487 | 8:+63170606 | MsG0880045715.01.T01:CDS |
| GATAAAGAAAATAGTGCATC+CGG | 0.454204 | 8:+63170042 | MsG0880045715.01.T01:CDS |
| GATAAAGAAAATAGTGCATC+CGG | 0.454204 | 8:+63170129 | MsG0880045715.01.T01:CDS |
| GATAAAGAAAATAGTGCATC+CGG | 0.454204 | 8:+63170216 | MsG0880045715.01.T01:CDS |
| GAAACAAAAGCCCAAGGCCT+CGG | 0.455604 | 8:+63170161 | MsG0880045715.01.T01:CDS |
| GAAACAAAAGCCGAAGGCCT+CGG | 0.457036 | 8:+63170074 | MsG0880045715.01.T01:CDS |
| CCAACTGCATCCGAGGTCTT+GGG | 0.457194 | 8:-63170432 | None:intergenic |
| CCAGCTGCATCCGAGGCCTT+CGG | 0.460223 | 8:-63170084 | None:intergenic |
| GATAAAGAAAATAGTGCAGC+TGG | 0.473192 | 8:+63170477 | MsG0880045715.01.T01:CDS |
| GAAACAAAAGCCTAAGGCCT+CGG | 0.476376 | 8:+63169804 | MsG0880045715.01.T01:CDS |
| CCAACTGCATCGGAGGCATT+GGG | 0.481852 | 8:-63170693 | None:intergenic |
| ATGTATCTCCTACTGAGTCT+TGG | 0.482455 | 8:-63170772 | None:intergenic |
| TTGATCTCCAGCTGCATCTG+AGG | 0.484086 | 8:-63170265 | None:intergenic |
| ACAAAAGGAGCAGCTGAAGA+TGG | 0.487902 | 8:+63169658 | MsG0880045715.01.T01:CDS |
| AAAGAAAAGCCCAAGGCCTC+GGG | 0.488466 | 8:+63170597 | MsG0880045715.01.T01:CDS |
| ACAATAATACCATAGGCTTA+GGG | 0.491816 | 8:+63170850 | MsG0880045715.01.T01:three_prime_UTR |
| GATGCTAAAGAGAAAACAAA+AGG | 0.507878 | 8:+63169535 | MsG0880045715.01.T01:CDS |
| GATGCTAAAGAGAAAACAAA+AGG | 0.507878 | 8:+63169589 | MsG0880045715.01.T01:CDS |
| CAATGTTAACCTAATTATAA+CGG | 0.509659 | 8:-63170956 | None:intergenic |
| TCTTTAACATCAGAGGCCTT+AGG | 0.511034 | 8:-63169901 | None:intergenic |
| AGCTGAAGCTGCTGCCTCAA+AGG | 0.511276 | 8:+63169366 | MsG0880045715.01.T01:CDS |
| TGTTAATACAATAATACCAT+AGG | 0.514961 | 8:+63170843 | MsG0880045715.01.T01:three_prime_UTR |
| TACTTTCTCTTTAACATCAG+AGG | 0.515846 | 8:-63169908 | None:intergenic |
| CCTCAAAGGCCACAGATTCA+GGG | 0.518776 | 8:+63169380 | MsG0880045715.01.T01:CDS |
| CTAAGGCCTCAGATGCAGTT+GGG | 0.519393 | 8:+63170346 | MsG0880045715.01.T01:CDS |
| GAAACGAAATCCAAAGGCCC+CGG | 0.519490 | 8:+63169987 | MsG0880045715.01.T01:CDS |
| CCCAAGGCCTCAGATGCAGC+TGG | 0.519853 | 8:+63170258 | MsG0880045715.01.T01:CDS |
| TAGACATTTCGGCTCAAAAG+AGG | 0.520960 | 8:+63169312 | MsG0880045715.01.T01:intron |
| AATCCCAAGGCCCCGGAAGT+AGG | 0.522917 | 8:+63169724 | MsG0880045715.01.T01:CDS |
| AATCCTAAGGCCCCGGAAGT+AGG | 0.522917 | 8:+63170516 | MsG0880045715.01.T01:CDS |
| GATGCTAAAGAGAAAACAAA+AGG | 0.527933 | 8:+63169643 | MsG0880045715.01.T01:CDS |
| CAAAACATAACATTTAGAAA+AGG | 0.531625 | 8:+63168937 | None:intergenic |
| AAAGCAAGTAGTGCATATAG+TGG | 0.531958 | 8:+63169688 | MsG0880045715.01.T01:CDS |
| CCAACTGCATCTGAGGCCTT+AGG | 0.538730 | 8:-63170345 | None:intergenic |
| AGCTTTATCTCCAACTGCAT+CGG | 0.544510 | 8:-63170703 | None:intergenic |
| GCAACGAAATCCCAAGGCCC+CGG | 0.545665 | 8:+63169717 | MsG0880045715.01.T01:CDS |
| GTTGCTAAAGATAAAGAAAG+TGG | 0.546622 | 8:+63170642 | MsG0880045715.01.T01:CDS |
| GCACAGAAATCCTAAGGCCC+CGG | 0.547115 | 8:+63170509 | MsG0880045715.01.T01:CDS |
| CCCAATGCCTCCGATGCAGT+TGG | 0.548764 | 8:+63170693 | MsG0880045715.01.T01:CDS |
| CCAACTGCATCCGAGGCCTT+AGG | 0.550068 | 8:-63169814 | None:intergenic |
| ATAAAGAAAATAGTGCATCT+GGG | 0.554138 | 8:+63170304 | MsG0880045715.01.T01:CDS |
| TCTTTAACAATGTTATCGAT+AGG | 0.556028 | 8:+63170896 | MsG0880045715.01.T01:three_prime_UTR |
| TTTATGCCCAACTGCATCTG+AGG | 0.557349 | 8:-63170352 | None:intergenic |
| CCCAAGACCTCGGATGCAGT+TGG | 0.557431 | 8:+63170432 | MsG0880045715.01.T01:CDS |
| CCTAAGGCCTCAGATGCAGT+TGG | 0.558130 | 8:+63170345 | MsG0880045715.01.T01:CDS |
| CCCAAGGCCCCGGAAGTAGG+TGG | 0.560916 | 8:+63169727 | MsG0880045715.01.T01:CDS |
| ATTGTTAAAGATAGCACAGA+AGG | 0.561656 | 8:-63170884 | None:intergenic |
| CCTAAGGCCTCGGATGCAGT+TGG | 0.566355 | 8:+63169814 | MsG0880045715.01.T01:CDS |
| CCTAAGGCCCCGGAAGTAGG+TGG | 0.569842 | 8:+63170519 | MsG0880045715.01.T01:CDS |
| TTTATTACCACCTGCTTCCG+GGG | 0.571551 | 8:-63170004 | None:intergenic |
| AGCCAAGAAACAAAAGCCTA+AGG | 0.575617 | 8:+63170329 | MsG0880045715.01.T01:CDS |
| GAAACAAAAGCCCAAGACCT+CGG | 0.579490 | 8:+63170422 | MsG0880045715.01.T01:CDS |
| CTTATCTCCAACTGCACCCG+AGG | 0.585136 | 8:-63170613 | None:intergenic |
| AACCAAGCACAGAAATCCTA+AGG | 0.585415 | 8:+63170503 | MsG0880045715.01.T01:CDS |
| TTTATCTCCAGCTGCATCCG+AGG | 0.588573 | 8:-63170091 | None:intergenic |
| TTTATCTCCAGCTGCATCCG+AGG | 0.588573 | 8:-63170178 | None:intergenic |
| TGAAAAGCCCAAGACTCAGT+AGG | 0.590771 | 8:+63170764 | MsG0880045715.01.T01:CDS |
| AGCCAAGAAACAAAAGCCTA+AGG | 0.592040 | 8:+63169798 | MsG0880045715.01.T01:CDS |
| AGCCAAGAAACAAAAGCCTA+AGG | 0.592040 | 8:+63169885 | MsG0880045715.01.T01:CDS |
| AGCCAAGAAACGAAATCCAA+AGG | 0.597720 | 8:+63169981 | MsG0880045715.01.T01:CDS |
| GAACACGGAAAAGCTAAAGC+AGG | 0.601184 | 8:+63169943 | MsG0880045715.01.T01:CDS |
| TCTACACAACTCTACACATA+CGG | 0.601407 | 8:-63169036 | None:intergenic |
| TTTATCTCCAACTGCATCCG+AGG | 0.602067 | 8:-63170439 | None:intergenic |
| AGCCCATCGAGCAAAAGTCT+CGG | 0.609947 | 8:-63169126 | None:intergenic |
| AAAGAAAATAGTGCAGCTGG+TGG | 0.613688 | 8:+63170480 | MsG0880045715.01.T01:CDS |
| TTTATCTCCAACTGCATCCG+AGG | 0.614203 | 8:-63169821 | None:intergenic |
| CCAAAGGCCCCGGAAGCAGG+TGG | 0.615708 | 8:+63169997 | MsG0880045715.01.T01:CDS |
| GTAAAAGAAGCAGTTGAACA+CGG | 0.616205 | 8:+63169928 | MsG0880045715.01.T01:CDS |
| TTTATCTCCAACTGCATCGG+AGG | 0.616222 | 8:-63170700 | None:intergenic |
| TAAAGAAAATAGTGCATCTG+GGG | 0.619982 | 8:+63170305 | MsG0880045715.01.T01:CDS |
| AAACAAGCAACGAAATCCCA+AGG | 0.624410 | 8:+63169711 | MsG0880045715.01.T01:CDS |
| GTTAAAGATAGCACAGAAGG+AGG | 0.633096 | 8:-63170881 | None:intergenic |
| TTTATTTCCACCTACTTCCG+GGG | 0.641914 | 8:-63169734 | None:intergenic |
| TTTATTTCCACCTACTTCCG+GGG | 0.641914 | 8:-63170526 | None:intergenic |
| AGCCAAGAAACAAAAGCCGA+AGG | 0.644467 | 8:+63170068 | MsG0880045715.01.T01:CDS |
| AGCCAAGAAACAAAAGCCCA+AGG | 0.644467 | 8:+63170155 | MsG0880045715.01.T01:CDS |
| AGCCAAGAAACAAAAGCCCA+AGG | 0.644467 | 8:+63170242 | MsG0880045715.01.T01:CDS |
| CACGGAAAAGCTAAAGCAGG+CGG | 0.657070 | 8:+63169946 | MsG0880045715.01.T01:CDS |
| AGCCAAGAAAGAAAAGCCCA+AGG | 0.677269 | 8:+63170590 | MsG0880045715.01.T01:CDS |
| GTTGTGTAGACCAGACGACG+TGG | 0.725809 | 8:+63169049 | MsG0880045715.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGATAACTTTTTAAGTT+TGG | - | Chr8:63169263-63169282 | None:intergenic | 15.0% |
| !! | CAATGTTAACCTAATTATAA+CGG | - | Chr8:63170959-63170978 | None:intergenic | 20.0% |
| !! | GAATTAATATATACCAGTAA+GGG | - | Chr8:63169447-63169466 | None:intergenic | 20.0% |
| !! | TGAATTAATATATACCAGTA+AGG | - | Chr8:63169448-63169467 | None:intergenic | 20.0% |
| !! | TGTTAATACAATAATACCAT+AGG | + | Chr8:63170843-63170862 | MsG0880045715.01.T01:three_prime_UTR | 20.0% |
| !! | TTCTTTATCTTTAGCATTAT+TGG | - | Chr8:63170292-63170311 | None:intergenic | 20.0% |
| !!! | GTTTTCTTGTTCATAAAATT+AGG | + | Chr8:63169237-63169256 | MsG0880045715.01.T01:intron | 20.0% |
| ! | AAATGCAAAATTTGTCTTGT+TGG | + | Chr8:63169001-63169020 | MsG0880045715.01.T01:CDS | 25.0% |
| ! | AATTGTTCTCATAGACATTT+CGG | + | Chr8:63169301-63169320 | MsG0880045715.01.T01:intron | 25.0% |
| ! | ACAATATTACCTAGATTTCA+TGG | + | Chr8:63169215-63169234 | MsG0880045715.01.T01:intron | 25.0% |
| ! | ATAAAGAAAATAGTGCATCT+GGG | + | Chr8:63169773-63169792 | MsG0880045715.01.T01:CDS | 25.0% |
| ! | ATTTCCAAGATTCATATTGT+TGG | + | Chr8:63170796-63170815 | MsG0880045715.01.T01:three_prime_UTR | 25.0% |
| ! | GATAAAGAAAATAATGCATC+TGG | + | Chr8:63170390-63170409 | MsG0880045715.01.T01:CDS | 25.0% |
| ! | TCTTTAACAATGTTATCGAT+AGG | + | Chr8:63170896-63170915 | MsG0880045715.01.T01:three_prime_UTR | 25.0% |
| ! | TTCTTTATCTTTAGCAACAT+TGG | - | Chr8:63169761-63169780 | None:intergenic | 25.0% |
| !!! | AGTCTTATTTTGTTTTCCTT+TGG | + | Chr8:63170987-63171006 | MsG0880045715.01.T01:three_prime_UTR | 25.0% |
| !!! | TTTTGTTTTCTCTTTAGCAT+CGG | - | Chr8:63169536-63169555 | None:intergenic | 25.0% |
| ACAAGAAAACCATGAAATCT+AGG | - | Chr8:63169227-63169246 | None:intergenic | 30.0% | |
| ACAATAATACCATAGGCTTA+GGG | + | Chr8:63170850-63170869 | MsG0880045715.01.T01:three_prime_UTR | 30.0% | |
| ATTGTTAAAGATAGCACAGA+AGG | - | Chr8:63170887-63170906 | None:intergenic | 30.0% | |
| GATAAAGAAAATAGTGCATC+CGG | + | Chr8:63169772-63169791 | MsG0880045715.01.T01:CDS | 30.0% | |
| GATAAAGAAAATAGTGCATC+TGG | + | Chr8:63169772-63169791 | MsG0880045715.01.T01:CDS | 30.0% | |
| GATGCTAAAGAGAAAACAAA+AGG | + | Chr8:63169535-63169554 | MsG0880045715.01.T01:CDS | 30.0% | |
| GTTGCTAAAGATAAAGAAAG+TGG | + | Chr8:63170642-63170661 | MsG0880045715.01.T01:CDS | 30.0% | |
| TAAAGAAAATAGTGCATCTG+GGG | + | Chr8:63169774-63169793 | MsG0880045715.01.T01:CDS | 30.0% | |
| TACAATAATACCATAGGCTT+AGG | + | Chr8:63170849-63170868 | MsG0880045715.01.T01:three_prime_UTR | 30.0% | |
| TACTTTCTCTTTAACATCAG+AGG | - | Chr8:63169911-63169930 | None:intergenic | 30.0% | |
| !!! | ATATTTTTTCCCTGAATCTG+TGG | - | Chr8:63169392-63169411 | None:intergenic | 30.0% |
| AAAGCAAGTAGTGCATATAG+TGG | + | Chr8:63169688-63169707 | MsG0880045715.01.T01:CDS | 35.0% | |
| ATGTTTCGGCCGTTATAATT+AGG | + | Chr8:63170947-63170966 | MsG0880045715.01.T01:three_prime_UTR | 35.0% | |
| CGATAGGTATCAGTGAAATA+TGG | + | Chr8:63170912-63170931 | MsG0880045715.01.T01:three_prime_UTR | 35.0% | |
| GAAAATGCCAAAGAAAAAGC+TGG | + | Chr8:63169074-63169093 | MsG0880045715.01.T01:CDS | 35.0% | |
| GATAAAGAAAATAGCGCATC+TGG | + | Chr8:63169859-63169878 | MsG0880045715.01.T01:CDS | 35.0% | |
| GATAAAGAAAATAGTGCAGC+TGG | + | Chr8:63170477-63170496 | MsG0880045715.01.T01:CDS | 35.0% | |
| GGAGAGTTTCTGTAATGTTT+CGG | + | Chr8:63170933-63170952 | MsG0880045715.01.T01:three_prime_UTR | 35.0% | |
| GTAAAAGAAGCAGTTGAACA+CGG | + | Chr8:63169928-63169947 | MsG0880045715.01.T01:CDS | 35.0% | |
| TCATTGACATTAACCCTTAC+TGG | + | Chr8:63169431-63169450 | MsG0880045715.01.T01:intron | 35.0% | |
| TCTACACAACTCTACACATA+CGG | - | Chr8:63169039-63169058 | None:intergenic | 35.0% | |
| TGCTCCAACAATATGAATCT+TGG | - | Chr8:63170803-63170822 | None:intergenic | 35.0% | |
| !! | AAAAGTCTCGGATTTTTCAG+TGG | - | Chr8:63169117-63169136 | None:intergenic | 35.0% |
| !!! | GTTTTTTTTCCCTAAGCCTA+TGG | - | Chr8:63170862-63170881 | None:intergenic | 35.0% |
| AAACAAGCAACGAAATCCCA+AGG | + | Chr8:63169711-63169730 | MsG0880045715.01.T01:CDS | 40.0% | |
| AAAGAAAATAGTGCAGCTGG+TGG | + | Chr8:63170480-63170499 | MsG0880045715.01.T01:CDS | 40.0% | |
| AACCAAGCACAGAAATCCTA+AGG | + | Chr8:63170503-63170522 | MsG0880045715.01.T01:CDS | 40.0% | |
| AGCCAAGAAACAAAAGCCTA+AGG | + | Chr8:63169798-63169817 | MsG0880045715.01.T01:CDS | 40.0% | |
| AGCCAAGAAACGAAATCCAA+AGG | + | Chr8:63169981-63170000 | MsG0880045715.01.T01:CDS | 40.0% | |
| AGCTGATCAGGCTTCAAAAA+CGG | + | Chr8:63169561-63169580 | MsG0880045715.01.T01:CDS | 40.0% | |
| ATGTATCTCCTACTGAGTCT+TGG | - | Chr8:63170775-63170794 | None:intergenic | 40.0% | |
| GTTAAAGATAGCACAGAAGG+AGG | - | Chr8:63170884-63170903 | None:intergenic | 40.0% | |
| TAGACATTTCGGCTCAAAAG+AGG | + | Chr8:63169312-63169331 | MsG0880045715.01.T01:intron | 40.0% | |
| TCAGGGAAAAAATATGCAGC+AGG | + | Chr8:63169397-63169416 | MsG0880045715.01.T01:CDS | 40.0% | |
| TCTTTAACATCAGAGGCCTT+AGG | - | Chr8:63169904-63169923 | None:intergenic | 40.0% | |
| TCTTTATTACCACCTGCTTC+CGG | - | Chr8:63170009-63170028 | None:intergenic | 40.0% | |
| TGCTGATCAGGCTTCAAAAA+CGG | + | Chr8:63169507-63169526 | MsG0880045715.01.T01:CDS | 40.0% | |
| TGTATCTCCTACTGAGTCTT+GGG | - | Chr8:63170774-63170793 | None:intergenic | 40.0% | |
| TTTATTTCCACCTACTTCCG+GGG | - | Chr8:63169737-63169756 | None:intergenic | 40.0% | |
| ! | AGCTTTATCTCCAACTGCAT+CGG | - | Chr8:63169827-63169846 | None:intergenic | 40.0% |
| ! | CTTTATTTCCACCTACTTCC+GGG | - | Chr8:63169738-63169757 | None:intergenic | 40.0% |
| !! | CTTTTGTTTCTTGGCTTCAC+CGG | - | Chr8:63169794-63169813 | None:intergenic | 40.0% |
| !! | GCTTTATTTCCACCTACTTC+CGG | - | Chr8:63169739-63169758 | None:intergenic | 40.0% |
| !! | TACCTCTCCAGCTTTTTCTT+TGG | - | Chr8:63169084-63169103 | None:intergenic | 40.0% |
| !! | TGTTTTCTCTTTAGCATCGG+AGG | - | Chr8:63169533-63169552 | None:intergenic | 40.0% |
| AACAAAAGGAGCAGCTGATC+AGG | + | Chr8:63169549-63169568 | MsG0880045715.01.T01:CDS | 45.0% | |
| ACAAAAGGAGCAGCTGAAGA+TGG | + | Chr8:63169658-63169677 | MsG0880045715.01.T01:CDS | 45.0% | |
| AGCCAAGAAACAAAAGCCCA+AGG | + | Chr8:63170155-63170174 | MsG0880045715.01.T01:CDS | 45.0% | |
| AGCCAAGAAACAAAAGCCGA+AGG | + | Chr8:63170068-63170087 | MsG0880045715.01.T01:CDS | 45.0% | |
| AGCCAAGAAAGAAAAGCCCA+AGG | + | Chr8:63170590-63170609 | MsG0880045715.01.T01:CDS | 45.0% | |
| CTTTATTACCACCTGCTTCC+GGG | - | Chr8:63170008-63170027 | None:intergenic | 45.0% | |
| GAAACAAAAGCCCAAGACCT+CGG | + | Chr8:63170422-63170441 | MsG0880045715.01.T01:CDS | 45.0% | |
| GAAACAAAAGCCTAAGGCCT+CGG | + | Chr8:63169804-63169823 | MsG0880045715.01.T01:CDS | 45.0% | |
| GAACACGGAAAAGCTAAAGC+AGG | + | Chr8:63169943-63169962 | MsG0880045715.01.T01:CDS | 45.0% | |
| GGCCTTTGGATTTCGTTTCT+TGG | - | Chr8:63169986-63170005 | None:intergenic | 45.0% | |
| TGAAAAGCCCAAGACTCAGT+AGG | + | Chr8:63170764-63170783 | MsG0880045715.01.T01:CDS | 45.0% | |
| TGCCAAAGAAAAAGCTGGAG+AGG | + | Chr8:63169079-63169098 | MsG0880045715.01.T01:CDS | 45.0% | |
| TTTATCTCCAACTGCATCCG+AGG | - | Chr8:63169824-63169843 | None:intergenic | 45.0% | |
| TTTATCTCCAACTGCATCGG+AGG | - | Chr8:63170703-63170722 | None:intergenic | 45.0% | |
| TTTATGCCCAACTGCATCTG+AGG | - | Chr8:63170355-63170374 | None:intergenic | 45.0% | |
| TTTATTACCACCTGCTTCCG+GGG | - | Chr8:63170007-63170026 | None:intergenic | 45.0% | |
| ! | AATCCGAGACTTTTGCTCGA+TGG | + | Chr8:63169123-63169142 | MsG0880045715.01.T01:CDS | 45.0% |
| ! | ATCCGAGACTTTTGCTCGAT+GGG | + | Chr8:63169124-63169143 | MsG0880045715.01.T01:CDS | 45.0% |
| ! | TACTGAGTCTTGGGCTTTTC+AGG | - | Chr8:63170765-63170784 | None:intergenic | 45.0% |
| !! | GGCATTGGGCTTTTCTTTCT+TGG | - | Chr8:63170682-63170701 | None:intergenic | 45.0% |
| !! | GGCCTTAGGCTTTTGTTTCT+TGG | - | Chr8:63169803-63169822 | None:intergenic | 45.0% |
| !! | GGTCTTGGGCTTTTGTTTCT+TGG | - | Chr8:63170421-63170440 | None:intergenic | 45.0% |
| !!! | TTTTGAAGCCTGATCAGCAG+CGG | - | Chr8:63169506-63169525 | None:intergenic | 45.0% |
| AAAGAAAAGCCCAAGGCCTC+GGG | + | Chr8:63170597-63170616 | MsG0880045715.01.T01:CDS | 50.0% | |
| AGCCCATCGAGCAAAAGTCT+CGG | - | Chr8:63169129-63169148 | None:intergenic | 50.0% | |
| CACGGAAAAGCTAAAGCAGG+CGG | + | Chr8:63169946-63169965 | MsG0880045715.01.T01:CDS | 50.0% | |
| CCTCAAAGGCCACAGATTCA+GGG | + | Chr8:63169380-63169399 | MsG0880045715.01.T01:CDS | 50.0% | |
| CTAAGGCCTCAGATGCAGTT+GGG | + | Chr8:63170346-63170365 | MsG0880045715.01.T01:CDS | 50.0% | |
| GAAACAAAAGCCCAAGGCCT+CGG | + | Chr8:63170161-63170180 | MsG0880045715.01.T01:CDS | 50.0% | |
| GAAACAAAAGCCGAAGGCCT+CGG | + | Chr8:63170074-63170093 | MsG0880045715.01.T01:CDS | 50.0% | |
| GAAACGAAATCCAAAGGCCC+CGG | + | Chr8:63169987-63170006 | MsG0880045715.01.T01:CDS | 50.0% | |
| GAAAGAAAAGCCCAAGGCCT+CGG | + | Chr8:63170596-63170615 | MsG0880045715.01.T01:CDS | 50.0% | |
| GGCCTTAGGATTTCTGTGCT+TGG | - | Chr8:63170508-63170527 | None:intergenic | 50.0% | |
| TTGATCTCCAGCTGCATCTG+AGG | - | Chr8:63170268-63170287 | None:intergenic | 50.0% | |
| TTTATCTCCAGCTGCATCCG+AGG | - | Chr8:63170094-63170113 | None:intergenic | 50.0% | |
| ! | GCATTTTCAACCACGTCGTC+TGG | - | Chr8:63169062-63169081 | None:intergenic | 50.0% |
| ! | GGCCTTGGGCTTTTCTTTCT+TGG | - | Chr8:63170595-63170614 | None:intergenic | 50.0% |
| !! | GGCCTTCGGCTTTTGTTTCT+TGG | - | Chr8:63170073-63170092 | None:intergenic | 50.0% |
| !! | GGCCTTGGGCTTTTGTTTCT+TGG | - | Chr8:63170160-63170179 | None:intergenic | 50.0% |
| AATCCTAAGGCCCCGGAAGT+AGG | + | Chr8:63170516-63170535 | MsG0880045715.01.T01:CDS | 55.0% | |
| AGCTGAAGCTGCTGCCTCAA+AGG | + | Chr8:63169366-63169385 | MsG0880045715.01.T01:CDS | 55.0% | |
| CCAACTGCATCCGAGGTCTT+GGG | - | Chr8:63170435-63170454 | None:intergenic | 55.0% | |
| CCATATAGCCGCTGCTGATC+AGG | + | Chr8:63169495-63169514 | MsG0880045715.01.T01:intron | 55.0% | |
| CCCTGAATCTGTGGCCTTTG+AGG | - | Chr8:63169383-63169402 | None:intergenic | 55.0% | |
| CCTAAGGCCTCAGATGCAGT+TGG | + | Chr8:63170345-63170364 | MsG0880045715.01.T01:CDS | 55.0% | |
| CCTGATCAGCAGCGGCTATA+TGG | - | Chr8:63169498-63169517 | None:intergenic | 55.0% | |
| CTTATCTCCAACTGCACCCG+AGG | - | Chr8:63170616-63170635 | None:intergenic | 55.0% | |
| GCACAGAAATCCTAAGGCCC+CGG | + | Chr8:63170509-63170528 | MsG0880045715.01.T01:CDS | 55.0% | |
| GCCTCAAAGGCCACAGATTC+AGG | + | Chr8:63169379-63169398 | MsG0880045715.01.T01:CDS | 55.0% | |
| GCTAAAGCAGGCGGTGCATA+TGG | + | Chr8:63169955-63169974 | MsG0880045715.01.T01:CDS | 55.0% | |
| GTTGTGTAGACCAGACGACG+TGG | + | Chr8:63169049-63169068 | MsG0880045715.01.T01:CDS | 55.0% | |
| TCCAACTGCATCCGAGGTCT+TGG | - | Chr8:63170436-63170455 | None:intergenic | 55.0% | |
| ! | CCAACTGCATCTGAGGCCTT+AGG | - | Chr8:63170348-63170367 | None:intergenic | 55.0% |
| ! | TCCAACTGCATCGGAGGCAT+TGG | - | Chr8:63170697-63170716 | None:intergenic | 55.0% |
| !! | CCAACTGCATCGGAGGCATT+GGG | - | Chr8:63170696-63170715 | None:intergenic | 55.0% |
| AATCCAAAGGCCCCGGAAGC+AGG | + | Chr8:63169994-63170013 | MsG0880045715.01.T01:CDS | 60.0% | |
| AATCCCAAGGCCCCGGAAGT+AGG | + | Chr8:63169724-63169743 | MsG0880045715.01.T01:CDS | 60.0% | |
| CCAACTGCATCCGAGGCCTT+AGG | - | Chr8:63169817-63169836 | None:intergenic | 60.0% | |
| CCCAAGACCTCGGATGCAGT+TGG | + | Chr8:63170432-63170451 | MsG0880045715.01.T01:CDS | 60.0% | |
| CCCAATGCCTCCGATGCAGT+TGG | + | Chr8:63170693-63170712 | MsG0880045715.01.T01:CDS | 60.0% | |
| CCTAAGGCCTCGGATGCAGT+TGG | + | Chr8:63169814-63169833 | MsG0880045715.01.T01:CDS | 60.0% | |
| GCAACGAAATCCCAAGGCCC+CGG | + | Chr8:63169717-63169736 | MsG0880045715.01.T01:CDS | 60.0% | |
| ! | CCAGCTGCATCTGAGGCCTT+GGG | - | Chr8:63170261-63170280 | None:intergenic | 60.0% |
| ! | TCCAGCTGCATCTGAGGCCT+TGG | - | Chr8:63170262-63170281 | None:intergenic | 60.0% |
| CCAACTGCACCCGAGGCCTT+GGG | - | Chr8:63170609-63170628 | None:intergenic | 65.0% | |
| CCACCTACTTCCGGGGCCTT+AGG | - | Chr8:63169730-63169749 | None:intergenic | 65.0% | |
| CCACCTACTTCCGGGGCCTT+GGG | - | Chr8:63169730-63169749 | None:intergenic | 65.0% | |
| CCAGCTGCATCCGAGGCCTT+CGG | - | Chr8:63170087-63170106 | None:intergenic | 65.0% | |
| CCAGCTGCATCCGAGGCCTT+GGG | - | Chr8:63170087-63170106 | None:intergenic | 65.0% | |
| CCCAAGGCCTCAGATGCAGC+TGG | + | Chr8:63170258-63170277 | MsG0880045715.01.T01:CDS | 65.0% | |
| CCTAAGGCCCCGGAAGTAGG+TGG | + | Chr8:63170519-63170538 | MsG0880045715.01.T01:CDS | 65.0% | |
| TCCAACTGCACCCGAGGCCT+TGG | - | Chr8:63170610-63170629 | None:intergenic | 65.0% | |
| TCCACCTACTTCCGGGGCCT+TGG | - | Chr8:63169731-63169750 | None:intergenic | 65.0% | |
| TCCAGCTGCATCCGAGGCCT+TGG | - | Chr8:63170088-63170107 | None:intergenic | 65.0% | |
| CCAAAGGCCCCGGAAGCAGG+TGG | + | Chr8:63169997-63170016 | MsG0880045715.01.T01:CDS | 70.0% | |
| CCACCTGCTTCCGGGGCCTT+TGG | - | Chr8:63170000-63170019 | None:intergenic | 70.0% | |
| CCCAAGGCCCCGGAAGTAGG+TGG | + | Chr8:63169727-63169746 | MsG0880045715.01.T01:CDS | 70.0% | |
| CCCAAGGCCTCGGATGCAGC+TGG | + | Chr8:63170171-63170190 | MsG0880045715.01.T01:CDS | 70.0% | |
| CCCAAGGCCTCGGGTGCAGT+TGG | + | Chr8:63170606-63170625 | MsG0880045715.01.T01:CDS | 70.0% | |
| CCGAAGGCCTCGGATGCAGC+TGG | + | Chr8:63170084-63170103 | MsG0880045715.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 63168943 | 63171013 | 63168943 | ID=MsG0880045715.01;Name=MsG0880045715.01 |
| Chr8 | mRNA | 63168943 | 63171013 | 63168943 | ID=MsG0880045715.01.T01;Parent=MsG0880045715.01;Name=MsG0880045715.01.T01;_AED=0.49;_eAED=0.49;_QI=47|1|1|1|1|1|3|228|520 |
| Chr8 | exon | 63168943 | 63169165 | 63168943 | ID=MsG0880045715.01.T01:exon:24120;Parent=MsG0880045715.01.T01 |
| Chr8 | exon | 63169315 | 63169418 | 63169315 | ID=MsG0880045715.01.T01:exon:24121;Parent=MsG0880045715.01.T01 |
| Chr8 | exon | 63169503 | 63171013 | 63169503 | ID=MsG0880045715.01.T01:exon:24122;Parent=MsG0880045715.01.T01 |
| Chr8 | five_prime_UTR | 63168943 | 63168989 | 63168943 | ID=MsG0880045715.01.T01:five_prime_utr;Parent=MsG0880045715.01.T01 |
| Chr8 | CDS | 63168990 | 63169165 | 63168990 | ID=MsG0880045715.01.T01:cds;Parent=MsG0880045715.01.T01 |
| Chr8 | CDS | 63169315 | 63169418 | 63169315 | ID=MsG0880045715.01.T01:cds;Parent=MsG0880045715.01.T01 |
| Chr8 | CDS | 63169503 | 63170785 | 63169503 | ID=MsG0880045715.01.T01:cds;Parent=MsG0880045715.01.T01 |
| Chr8 | three_prime_UTR | 63170786 | 63171013 | 63170786 | ID=MsG0880045715.01.T01:three_prime_utr;Parent=MsG0880045715.01.T01 |
| Gene Sequence |
| Protein sequence |
