AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020997.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020997.01.T01 MTR_4g063830 97.987 447 9 0 1 447 1 447 0.0 910
MsG0480020997.01.T01 MTR_2g096760 74.944 447 106 5 1 445 1 443 0.0 693
MsG0480020997.01.T01 MTR_4g021880 59.911 449 166 6 1 440 80 523 2.10e-179 512
MsG0480020997.01.T01 MTR_4g021880 61.290 341 124 3 1 335 80 418 7.61e-134 392
MsG0480020997.01.T01 MTR_0020s0130 33.251 403 207 13 1 372 1 372 4.86e-45 164
MsG0480020997.01.T01 MTR_1g100797 31.204 407 218 13 1 376 1 376 2.06e-40 151
MsG0480020997.01.T01 MTR_4g129470 30.303 396 221 9 6 376 11 376 8.87e-38 144
MsG0480020997.01.T01 MTR_4g129470 29.968 317 168 8 85 376 1 288 1.80e-24 105
MsG0480020997.01.T01 MTR_1g100797 29.412 306 164 11 81 376 9 272 2.14e-22 99.0
MsG0480020997.01.T01 MTR_1g115575 31.731 208 121 8 13 216 132 322 3.57e-16 81.3
MsG0480020997.01.T01 MTR_7g100390 30.000 210 126 6 11 216 48 240 1.74e-15 79.0
MsG0480020997.01.T01 MTR_7g117620 30.603 232 139 6 13 239 82 296 1.20e-14 76.3
MsG0480020997.01.T01 MTR_1g112830 26.383 235 153 5 1 232 124 341 3.13e-14 75.5
MsG0480020997.01.T01 MTR_2g096190 28.019 207 130 5 13 216 67 257 6.50e-14 74.3
MsG0480020997.01.T01 MTR_5g043640 31.818 220 130 4 13 229 20 222 9.14e-14 71.2
MsG0480020997.01.T01 MTR_4g062100 26.829 205 135 4 13 216 71 261 4.31e-12 68.6
MsG0480020997.01.T01 MTR_6g027840 29.000 200 126 4 51 250 181 364 1.50e-11 66.6
MsG0480020997.01.T01 MTR_7g115280 27.076 277 165 8 51 296 59 329 5.60e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020997.01.T01 AT2G28840 67.834 457 133 5 1 446 1 454 0.0 627
MsG0480020997.01.T01 AT2G28840 69.948 386 103 4 72 446 57 440 0.0 551
MsG0480020997.01.T01 AT5G07270 31.463 410 230 10 1 388 1 381 2.16e-42 157
MsG0480020997.01.T01 AT5G57740 29.442 394 222 10 6 372 11 375 6.21e-31 125
MsG0480020997.01.T01 AT5G02620 27.300 337 201 12 11 329 55 365 1.91e-19 91.3
MsG0480020997.01.T01 AT5G02620 27.300 337 201 12 11 329 55 365 1.91e-19 91.3
MsG0480020997.01.T01 AT5G02620 27.300 337 201 12 11 329 55 365 1.91e-19 91.3
MsG0480020997.01.T01 AT5G02620 30.583 206 122 5 11 212 55 243 8.46e-18 86.3
MsG0480020997.01.T01 AT5G02620 30.583 206 122 5 11 212 55 243 8.46e-18 86.3
MsG0480020997.01.T01 AT5G60070 26.488 336 208 12 13 330 74 388 1.54e-17 85.5
MsG0480020997.01.T01 AT5G60070 29.187 209 127 4 16 216 36 231 7.93e-13 70.9
MsG0480020997.01.T01 AT3G12360 31.674 221 127 10 13 226 130 333 1.68e-15 79.3
MsG0480020997.01.T01 AT3G12360 31.674 221 127 10 13 226 118 321 1.88e-15 79.0
MsG0480020997.01.T01 AT1G07710 30.144 209 129 5 11 217 65 258 7.10e-15 77.0
MsG0480020997.01.T01 AT1G07710 30.144 209 129 5 11 217 65 258 7.10e-15 77.0
MsG0480020997.01.T01 AT5G20350 26.613 248 159 6 7 248 22 252 2.18e-14 75.9
MsG0480020997.01.T01 AT3G04710 32.093 215 103 6 51 236 59 259 2.56e-14 75.1
MsG0480020997.01.T01 AT3G04710 28.625 269 138 8 51 290 283 526 3.83e-14 75.1
MsG0480020997.01.T01 AT3G04710 28.625 269 137 7 51 290 59 301 1.84e-13 72.4
MsG0480020997.01.T01 AT5G13530 25.592 211 133 5 16 216 472 668 1.88e-12 70.1
MsG0480020997.01.T01 AT5G13530 25.592 211 133 5 16 216 472 668 1.88e-12 70.1
MsG0480020997.01.T01 AT2G31820 26.749 243 162 6 13 253 190 418 2.68e-12 69.3
MsG0480020997.01.T01 AT3G24530 32.895 152 88 4 23 169 26 168 5.45e-12 68.2

Find 121 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTAGAGCAGGCATTAT+TGG 0.246425 4:+51799077 MsG0480020997.01.T01:CDS
GGAAAGGCATGGCCTATTAT+TGG 0.282536 4:+51800613 MsG0480020997.01.T01:three_prime_UTR
CTAGTCCCGTGGCTGCTTCT+TGG 0.292776 4:+51797901 MsG0480020997.01.T01:CDS
AAAATGAGCGGCCGTAGTTC+CGG 0.300237 4:+51800238 MsG0480020997.01.T01:CDS
TGTGCTTCAACTAGCAGATA+TGG 0.305279 4:+51798153 MsG0480020997.01.T01:CDS
CGTCTCCAACGTGATGCATC+TGG 0.332475 4:+51798364 MsG0480020997.01.T01:CDS
TGGTCATTCTTCTTGCCTTA+AGG 0.368140 4:+51797857 MsG0480020997.01.T01:CDS
AGGCATTATTGGACGCGAAC+AGG 0.370869 4:+51799088 MsG0480020997.01.T01:CDS
GATAACCATCAGTTTAGATA+TGG 0.374202 4:-51800074 None:intergenic
TGTGGAGATGGAAGAGAGTA+AGG 0.374735 4:-51799141 None:intergenic
AAATGAGCGGCCGTAGTTCC+GGG 0.375798 4:+51800239 MsG0480020997.01.T01:CDS
ATCACATGACAACCAATAAT+AGG 0.376232 4:-51800625 None:intergenic
CGAAATTTCCTTGATTTGCT+TGG 0.378282 4:-51800154 None:intergenic
TTGCATTATGCTGCTTACTA+TGG 0.392266 4:+51797837 MsG0480020997.01.T01:CDS
TACTTCAAAGCAACCACATA+TGG 0.395193 4:-51798949 None:intergenic
AACAGAATGTGCACACATTC+AGG 0.420204 4:-51798111 None:intergenic
CATCTGCACAGCCTCTTGTA+TGG 0.420700 4:+51799007 MsG0480020997.01.T01:CDS
TTGTCCAATGTAAATTCATT+CGG 0.426931 4:+51800214 MsG0480020997.01.T01:CDS
CCTCTTCATTTAGCAGCTAA+AGG 0.427567 4:+51798295 MsG0480020997.01.T01:CDS
CTGATTATCTTCAATGATGA+TGG 0.429013 4:-51799030 None:intergenic
GGGTAGCAGCAGCAGTTTCA+AGG 0.445286 4:+51800189 MsG0480020997.01.T01:CDS
AGAGAGAGAAGAAGGGAGGG+AGG 0.447791 4:-51796906 None:intergenic
AGGTGCTACACCATTGCATC+TGG 0.451079 4:+51798071 MsG0480020997.01.T01:CDS
TGATTGCTTCCGAAAATGAA+TGG 0.451396 4:+51800263 MsG0480020997.01.T01:CDS
ACATCTGGTGGCCACAGTCT+TGG 0.456216 4:-51799958 None:intergenic
TCTAATAAAACTTTAGCCTC+TGG 0.458151 4:-51799063 None:intergenic
TGCTATATTTGCAGATGTCC+TGG 0.458321 4:+51798265 MsG0480020997.01.T01:intron
ATCTAAACTGATGGTTATCA+AGG 0.465152 4:+51800078 MsG0480020997.01.T01:CDS
GTGTGCATTGTGCACACATC+TGG 0.471356 4:-51799973 None:intergenic
GATATGGCGCTTCGACAGAA+TGG 0.471448 4:-51800058 None:intergenic
AATGAGCAATAAAATAAGAA+AGG 0.473754 4:+51800591 MsG0480020997.01.T01:three_prime_UTR
GTTTCAAGCCAAGCAAATCA+AGG 0.478084 4:+51800146 MsG0480020997.01.T01:CDS
GTGCTTCAACTAGCAGATAT+GGG 0.478560 4:+51798154 MsG0480020997.01.T01:CDS
GAGAGAGAAGAAGGGAGGGA+GGG 0.484354 4:-51796905 None:intergenic
CTTCATATTGCTGCTGCCAA+TGG 0.485862 4:+51797181 MsG0480020997.01.T01:CDS
TATTGGACGCGAACAGGGAA+AGG 0.487813 4:+51799094 MsG0480020997.01.T01:CDS
TGCTGCCAATGGTCAGATCC+AGG 0.493489 4:+51797192 MsG0480020997.01.T01:CDS
TGCATTGCTGCCAACATAAG+TGG 0.493653 4:-51797634 None:intergenic
CAGCAGAAAGTATTGCCTTA+AGG 0.496959 4:-51797872 None:intergenic
GGTAGCAGCAGCAGTTTCAA+GGG 0.499150 4:+51800190 MsG0480020997.01.T01:CDS
GCTATATTTGCAGATGTCCT+GGG 0.514636 4:+51798266 MsG0480020997.01.T01:intron
CATCCGCGAATTATTAGCAT+GGG 0.514704 4:+51798333 MsG0480020997.01.T01:CDS
CTCTTTCGTGCTGTTCAACA+TGG 0.515412 4:+51797076 MsG0480020997.01.T01:CDS
TTGATTTGAAAACGTGGAGA+AGG 0.515471 4:+51797008 MsG0480020997.01.T01:five_prime_UTR
TGTGTTGAATCGACAAAAGC+AGG 0.516759 4:+51797472 MsG0480020997.01.T01:CDS
ATCTCCACACTCTGATCGAA+TGG 0.518796 4:+51799155 MsG0480020997.01.T01:CDS
ATGCAGGCGGATACCATATG+TGG 0.519878 4:+51798936 MsG0480020997.01.T01:intron
ATGAGCAATAAAATAAGAAA+GGG 0.522122 4:+51800592 MsG0480020997.01.T01:three_prime_UTR
GTCTCCAACGTGATGCATCT+GGG 0.525701 4:+51798365 MsG0480020997.01.T01:CDS
AATGGACAGATGGGTGGGGT+GGG 0.525799 4:-51800040 None:intergenic
AGCAGTTATTCAGACTAACT+TGG 0.526064 4:-51796841 None:intergenic
ATGCTGCATCTGCTTTGAGC+AGG 0.528277 4:+51799919 MsG0480020997.01.T01:CDS
GACAGAATGGACAGATGGGT+GGG 0.529180 4:-51800045 None:intergenic
TTTGAAAACGTGGAGAAGGA+TGG 0.530704 4:+51797012 MsG0480020997.01.T01:exon
AGGGAGGGACAGTGTCACAT+AGG 0.531010 4:-51796890 None:intergenic
CACCCCATGCTAATAATTCG+CGG 0.532650 4:-51798336 None:intergenic
ATTCGATCAGAGTGTGGAGA+TGG 0.534607 4:-51799153 None:intergenic
GAATGGACAGATGGGTGGGG+TGG 0.536558 4:-51800041 None:intergenic
GTAGTACGATTGAGAAGAGA+AGG 0.541763 4:-51797136 None:intergenic
GGCATTATTGGACGCGAACA+GGG 0.542709 4:+51799089 MsG0480020997.01.T01:CDS
AATTCAGACCCCACTTATGT+TGG 0.543384 4:+51797624 MsG0480020997.01.T01:intron
CTTATGTTGGCAGCAATGCA+TGG 0.544992 4:+51797637 MsG0480020997.01.T01:CDS
CAAAGTGGTCTTAGTTGTAG+AGG 0.545298 4:+51797037 MsG0480020997.01.T01:CDS
CCTTTAGCTGCTAAATGAAG+AGG 0.547668 4:-51798295 None:intergenic
GACTAACCAAGAAGCAGCCA+CGG 0.550497 4:-51797907 None:intergenic
GATTGCTTCCGAAAATGAAT+GGG 0.551989 4:+51800264 MsG0480020997.01.T01:CDS
GCATTGCTGCCAACATAAGT+GGG 0.556318 4:-51797633 None:intergenic
AAGCAATCATCCCGGAACTA+CGG 0.559960 4:-51800249 None:intergenic
CAATCAAATGATAATAAATG+TGG 0.568505 4:+51796980 MsG0480020997.01.T01:five_prime_UTR
TATTCAGACTAACTTGGCTG+TGG 0.570278 4:-51796835 None:intergenic
GTGAATATTAGAGACGGTAG+AGG 0.570533 4:+51798051 MsG0480020997.01.T01:CDS
GTGGAAAAGTTGCTTGAAGC+TGG 0.573507 4:+51797673 MsG0480020997.01.T01:CDS
TTGAAAACGTGGAGAAGGAT+GGG 0.574196 4:+51797013 MsG0480020997.01.T01:exon
CAATAAAATAAGAAAGGGAA+AGG 0.577041 4:+51800597 MsG0480020997.01.T01:three_prime_UTR
ATTGGACGCGAACAGGGAAA+GGG 0.577168 4:+51799095 MsG0480020997.01.T01:CDS
TTAATGTTTGATGTGTGTCA+TGG 0.578777 4:+51797804 MsG0480020997.01.T01:CDS
GCTTCGACAGAATGGACAGA+TGG 0.579479 4:-51800050 None:intergenic
ACAGAATGGACAGATGGGTG+GGG 0.584465 4:-51800044 None:intergenic
TTGAACCTGGATCTGACCAT+TGG 0.585236 4:-51797197 None:intergenic
GGTAGAAACTCACGAAGACA+TGG 0.587372 4:+51800099 MsG0480020997.01.T01:CDS
TGGCAGCAGCAATATGAAGA+GGG 0.588977 4:-51797177 None:intergenic
CGACAGAATGGACAGATGGG+TGG 0.592181 4:-51800046 None:intergenic
ATCTGGCAGCTCGTCAAAGA+CGG 0.594811 4:+51798088 MsG0480020997.01.T01:CDS
AGACTAACTTGGCTGTGGCA+TGG 0.597086 4:-51796830 None:intergenic
AAGCGCCATATCTAAACTGA+TGG 0.601000 4:+51800069 MsG0480020997.01.T01:CDS
TGACGAGCTGCCAGATGCAA+TGG 0.602034 4:-51798081 None:intergenic
GTGCACATTCTGTTGTGTAG+TGG 0.607255 4:+51798120 MsG0480020997.01.T01:CDS
AATGATGATGGCCATACAAG+AGG 0.608678 4:-51799018 None:intergenic
TGCTGCTCAATCTAGTCCCG+TGG 0.608978 4:+51797890 MsG0480020997.01.T01:CDS
GCAACTATGCTTGATAAGCA+AGG 0.609839 4:+51800357 MsG0480020997.01.T01:three_prime_UTR
GCATGGAAAGATTGAATGTG+TGG 0.610223 4:+51797654 MsG0480020997.01.T01:CDS
GCATCCGCGAATTATTAGCA+TGG 0.610332 4:+51798332 MsG0480020997.01.T01:CDS
CGAATTATTAGCATGGGGTG+CGG 0.613204 4:+51798339 MsG0480020997.01.T01:CDS
GGGATGCGAAGTTGAAGTGT+TGG 0.613230 4:-51800020 None:intergenic
CTTCATTTAGCAGCTAAAGG+AGG 0.613756 4:+51798298 MsG0480020997.01.T01:CDS
AAATGAAGAGGAGTACTCCC+AGG 0.616255 4:-51798283 None:intergenic
CTTCGACAGAATGGACAGAT+GGG 0.616676 4:-51800049 None:intergenic
TTGGCAGCAGCAATATGAAG+AGG 0.619663 4:-51797178 None:intergenic
ACTAACCAAGAAGCAGCCAC+GGG 0.627620 4:-51797906 None:intergenic
AACACTCTGCTGTCACAACA+AGG 0.631175 4:+51799997 MsG0480020997.01.T01:CDS
AAATAAGAAAGGGAAAGGCA+TGG 0.635946 4:+51800602 MsG0480020997.01.T01:three_prime_UTR
TGTAGAGGTAGTCATGAACA+TGG 0.643863 4:+51797052 MsG0480020997.01.T01:CDS
CGGTTTGTGAATATTAGAGA+CGG 0.645981 4:+51798045 MsG0480020997.01.T01:CDS
TCATCCATTCGATCAGAGTG+TGG 0.646169 4:-51799159 None:intergenic
TGCATTGTGCACACATCTGG+TGG 0.649232 4:-51799970 None:intergenic
AACAGGTGTCGACATCATTG+TGG 0.652268 4:-51800298 None:intergenic
TAGTACGATTGAGAAGAGAA+GGG 0.656985 4:-51797135 None:intergenic
TGGAGAAGGATGGGTCAAAG+TGG 0.658025 4:+51797022 MsG0480020997.01.T01:exon
AATCAGTGAACTTAATCCAG+AGG 0.659408 4:+51799047 MsG0480020997.01.T01:CDS
GGCAGCAGCAATATGAAGAG+GGG 0.664522 4:-51797176 None:intergenic
CACGAAGACATGGATCTAGA+CGG 0.665249 4:+51800109 MsG0480020997.01.T01:CDS
TTTGCTTGGCTTGAAACAAG+TGG 0.668168 4:-51800140 None:intergenic
TGTACCCAGATGCATCACGT+TGG 0.686205 4:-51798369 None:intergenic
ATCCGCGAATTATTAGCATG+GGG 0.692205 4:+51798334 MsG0480020997.01.T01:CDS
GTTGCTTTGAAGTACAAACA+TGG 0.699828 4:+51798958 MsG0480020997.01.T01:CDS
AAATTTCGTAACATGAACGA+GGG 0.699839 4:+51800169 MsG0480020997.01.T01:CDS
GAAATTTCGTAACATGAACG+AGG 0.700659 4:+51800168 MsG0480020997.01.T01:CDS
GAAACTTTGATTTGAAAACG+TGG 0.708844 4:+51797002 MsG0480020997.01.T01:five_prime_UTR
CATTGCTGCCAACATAAGTG+GGG 0.709787 4:-51797632 None:intergenic
AATGGATGACAACATCTCTG+AGG 0.710530 4:+51799173 MsG0480020997.01.T01:CDS
ATAATTGAAGTCCAAGACTG+TGG 0.721086 4:+51799947 MsG0480020997.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTATGAAAAATTATC+AGG + Chr4:51797779-51797798 MsG0480020997.01.T01:intron 10.0%
!! TATAAATTTAATAAGTTTGT+AGG - Chr4:51799288-51799307 None:intergenic 10.0%
!!! GATTATATTTTTCAAATTAT+AGG - Chr4:51798730-51798749 None:intergenic 10.0%
!!! TATCTTTAATTGTATTTTTT+TGG + Chr4:51797598-51797617 MsG0480020997.01.T01:intron 10.0%
!! AAAAATATAATCACTTGTTT+CGG + Chr4:51798738-51798757 MsG0480020997.01.T01:intron 15.0%
!! AAACTTATTAAATTTATAGC+AGG + Chr4:51799290-51799309 MsG0480020997.01.T01:intron 15.0%
!! AAATATGTAAACCTATTATT+TGG + Chr4:51798661-51798680 MsG0480020997.01.T01:intron 15.0%
!! TCATAAAATTGAAATAAACA+TGG - Chr4:51797723-51797742 None:intergenic 15.0%
!!! AAGAATTTTCTCAAATTTAA+TGG - Chr4:51800493-51800512 None:intergenic 15.0%
!!! CTAATTATTTGGATATTTTT+CGG + Chr4:51799317-51799336 MsG0480020997.01.T01:intron 15.0%
!!! GATTTTAAAACATTTAACAA+TGG + Chr4:51797990-51798009 MsG0480020997.01.T01:intron 15.0%
!! AAAAAATTTCAAAACCCAAT+TGG - Chr4:51797366-51797385 None:intergenic 20.0%
!! AAAAATTTCAAAACCCAATT+GGG - Chr4:51797365-51797384 None:intergenic 20.0%
!! AAAATTGAAATAAACATGGA+GGG - Chr4:51797719-51797738 None:intergenic 20.0%
!! AAGAATACAATTATATTGCA+GGG + Chr4:51798014-51798033 MsG0480020997.01.T01:intron 20.0%
!! AATGAGCAATAAAATAAGAA+AGG + Chr4:51800591-51800610 MsG0480020997.01.T01:three_prime_UTR 20.0%
!! AGGTAAAATGAAAGTAAAAA+AGG + Chr4:51800377-51800396 MsG0480020997.01.T01:three_prime_UTR 20.0%
!! ATGAGCAATAAAATAAGAAA+GGG + Chr4:51800592-51800611 MsG0480020997.01.T01:three_prime_UTR 20.0%
!! CAATCAAATGATAATAAATG+TGG + Chr4:51796980-51796999 MsG0480020997.01.T01:five_prime_UTR 20.0%
!! TAAAATTGAAATAAACATGG+AGG - Chr4:51797720-51797739 None:intergenic 20.0%
!! TCATTAATTTCTTTCCTAAT+TGG + Chr4:51797943-51797962 MsG0480020997.01.T01:intron 20.0%
!! TTTAACTGATCAAAATTAGA+AGG - Chr4:51799384-51799403 None:intergenic 20.0%
!!! GATTTGAATTTGGATTTTAA+TGG + Chr4:51797521-51797540 MsG0480020997.01.T01:intron 20.0%
!!! TACACAATACATTTTCTTTA+TGG - Chr4:51800543-51800562 None:intergenic 20.0%
!!! TGTTTGCTATTTTTCAATTT+AGG + Chr4:51798783-51798802 MsG0480020997.01.T01:intron 20.0%
!!! TTCTTTTTTCTCATTAGTTA+AGG + Chr4:51800508-51800527 MsG0480020997.01.T01:three_prime_UTR 20.0%
!!! TTTGGATTTTGATTTGAATT+TGG + Chr4:51797511-51797530 MsG0480020997.01.T01:intron 20.0%
! AAAATTTCAAAACCCAATTG+GGG - Chr4:51797364-51797383 None:intergenic 25.0%
! AACACGAAAAAAGAATGTAA+AGG - Chr4:51797230-51797249 None:intergenic 25.0%
! AAGTAGTAAATTCAAATGGT+TGG - Chr4:51799224-51799243 None:intergenic 25.0%
! AATTAATGACAAAACCGAAA+AGG - Chr4:51797932-51797951 None:intergenic 25.0%
! ACACGAAAAAAGAATGTAAA+GGG - Chr4:51797229-51797248 None:intergenic 25.0%
! ACTTGAAAGTTGAATAAAAC+AGG - Chr4:51798876-51798895 None:intergenic 25.0%
! AGAATACAATTATATTGCAG+GGG + Chr4:51798015-51798034 MsG0480020997.01.T01:intron 25.0%
! AGCAAAGTAGTAAATTCAAA+TGG - Chr4:51799228-51799247 None:intergenic 25.0%
! AGTTGTAGTAGTAAAATGTA+AGG + Chr4:51798688-51798707 MsG0480020997.01.T01:intron 25.0%
! CAAGAATACAATTATATTGC+AGG + Chr4:51798013-51798032 MsG0480020997.01.T01:intron 25.0%
! CAATAAAATAAGAAAGGGAA+AGG + Chr4:51800597-51800616 MsG0480020997.01.T01:three_prime_UTR 25.0%
! GAATCATAACAATGTTTCTT+GGG - Chr4:51798820-51798839 None:intergenic 25.0%
! GAATTTACTACTTTGCTTAT+AGG + Chr4:51799231-51799250 MsG0480020997.01.T01:intron 25.0%
! TACAACTAATGCCAAATAAT+AGG - Chr4:51798675-51798694 None:intergenic 25.0%
! TGAATCATAACAATGTTTCT+TGG - Chr4:51798821-51798840 None:intergenic 25.0%
! TTGTATGATCTATCAATTGT+GGG - Chr4:51798643-51798662 None:intergenic 25.0%
! TTGTCCAATGTAAATTCATT+CGG + Chr4:51800214-51800233 MsG0480020997.01.T01:CDS 25.0%
! TTTGTATGATCTATCAATTG+TGG - Chr4:51798644-51798663 None:intergenic 25.0%
!! AAAGAGATGATAGTTTTCTA+AGG - Chr4:51799537-51799556 None:intergenic 25.0%
!! AGACGTTTCGTAATAATTTT+TGG - Chr4:51797308-51797327 None:intergenic 25.0%
!! GTTTTATCTAAGCTTTTAGA+TGG + Chr4:51797434-51797453 MsG0480020997.01.T01:CDS 25.0%
!! TTTTCCGAATGAATTTACAT+TGG - Chr4:51800221-51800240 None:intergenic 25.0%
!!! GGTGATTTGTTAATGTTATT+TGG + Chr4:51797493-51797512 MsG0480020997.01.T01:intron 25.0%
!!! TCCATTATACATTCACTTTT+GGG + Chr4:51799730-51799749 MsG0480020997.01.T01:intron 25.0%
!!! TGTTGAATCATTTTGTTTTG+TGG + Chr4:51798232-51798251 MsG0480020997.01.T01:intron 25.0%
!!! TTTTTTTTTTGGGAATTTGC+AGG + Chr4:51797412-51797431 MsG0480020997.01.T01:intron 25.0%
AAAATGTAAGGAAGTCTCTA+AGG + Chr4:51798700-51798719 MsG0480020997.01.T01:intron 30.0%
AAATTTCGTAACATGAACGA+GGG + Chr4:51800169-51800188 MsG0480020997.01.T01:CDS 30.0%
AATTCATTCGGAAAAATGAG+CGG + Chr4:51800226-51800245 MsG0480020997.01.T01:CDS 30.0%
ACTGTATCATCTCAAGTTAA+CGG - Chr4:51798512-51798531 None:intergenic 30.0%
AGGGAGAAAAACATATTGAA+AGG + Chr4:51799114-51799133 MsG0480020997.01.T01:CDS 30.0%
ATAAAACACACACAGTTTGA+AGG - Chr4:51798918-51798937 None:intergenic 30.0%
ATATAATCACTTGTTTCGGT+AGG + Chr4:51798742-51798761 MsG0480020997.01.T01:intron 30.0%
ATCTAAACTGATGGTTATCA+AGG + Chr4:51800078-51800097 MsG0480020997.01.T01:CDS 30.0%
CTGATTATCTTCAATGATGA+TGG - Chr4:51799033-51799052 None:intergenic 30.0%
GAATACAATTATATTGCAGG+GGG + Chr4:51798016-51798035 MsG0480020997.01.T01:intron 30.0%
GATAACCATCAGTTTAGATA+TGG - Chr4:51800077-51800096 None:intergenic 30.0%
TAACAATGTTTCTTGGGATA+AGG - Chr4:51798814-51798833 None:intergenic 30.0%
TACAGCAATGCAAATGTAAA+GGG - Chr4:51799798-51799817 None:intergenic 30.0%
TAGCAGGAAGTCTAATTATT+TGG + Chr4:51799306-51799325 MsG0480020997.01.T01:intron 30.0%
TCTAATAAAACTTTAGCCTC+TGG - Chr4:51799066-51799085 None:intergenic 30.0%
TTAATGTTTGATGTGTGTCA+TGG + Chr4:51797804-51797823 MsG0480020997.01.T01:CDS 30.0%
TTACAGCAATGCAAATGTAA+AGG - Chr4:51799799-51799818 None:intergenic 30.0%
TTATTACGAAACGTCTTAGA+TGG + Chr4:51797312-51797331 MsG0480020997.01.T01:intron 30.0%
TTTATTAGAGCAGGCATTAT+TGG + Chr4:51799077-51799096 MsG0480020997.01.T01:CDS 30.0%
! AAAGAGTAGAAACAGTTTTC+AGG - Chr4:51797105-51797124 None:intergenic 30.0%
! ATCATCAACCCATTCATTTT+CGG - Chr4:51800275-51800294 None:intergenic 30.0%
! CGAGATCTAATGTAATTTTC+AGG + Chr4:51799880-51799899 MsG0480020997.01.T01:intron 30.0%
! CTTTCCTAATTGGTTCATAT+CGG + Chr4:51797953-51797972 MsG0480020997.01.T01:intron 30.0%
! GTCCATTATACATTCACTTT+TGG + Chr4:51799729-51799748 MsG0480020997.01.T01:intron 30.0%
!! AATGGTTGGTAAGAAATCAA+AGG - Chr4:51799210-51799229 None:intergenic 30.0%
!! ATGGTTGGTAAGAAATCAAA+GGG - Chr4:51799209-51799228 None:intergenic 30.0%
!! CCATTATACATTCACTTTTG+GGG + Chr4:51799731-51799750 MsG0480020997.01.T01:intron 30.0%
!! GAAACTTTGATTTGAAAACG+TGG + Chr4:51797002-51797021 MsG0480020997.01.T01:five_prime_UTR 30.0%
!! TGAAGATTTTTATTTCTCGC+TGG - Chr4:51799826-51799845 None:intergenic 30.0%
AAATAAGAAAGGGAAAGGCA+TGG + Chr4:51800602-51800621 MsG0480020997.01.T01:three_prime_UTR 35.0%
AACTCTGAGCTATTTGTCTT+TGG + Chr4:51799422-51799441 MsG0480020997.01.T01:intron 35.0%
AACTTGAGATTGAACTGTTG+AGG + Chr4:51798578-51798597 MsG0480020997.01.T01:intron 35.0%
AATCAGTGAACTTAATCCAG+AGG + Chr4:51799047-51799066 MsG0480020997.01.T01:CDS 35.0%
ACATAGATTACAAGTCAGAG+AGG - Chr4:51799772-51799791 None:intergenic 35.0%
AGCAGTTATTCAGACTAACT+TGG - Chr4:51796844-51796863 None:intergenic 35.0%
ATAATTGAAGTCCAAGACTG+TGG + Chr4:51799947-51799966 MsG0480020997.01.T01:CDS 35.0%
ATCACCGATATGAACCAATT+AGG - Chr4:51797960-51797979 None:intergenic 35.0%
ATCATCTCTTTACCATCTGT+AGG + Chr4:51799546-51799565 MsG0480020997.01.T01:intron 35.0%
ATCTCACCAATGATGATCAA+TGG + Chr4:51798430-51798449 MsG0480020997.01.T01:intron 35.0%
ATTGGTGAGATCTTATCAAG+TGG - Chr4:51798421-51798440 None:intergenic 35.0%
CCAAATCCATTGATCATCAT+TGG - Chr4:51798439-51798458 None:intergenic 35.0%
CCCCAAAAGTGAATGTATAA+TGG - Chr4:51799734-51799753 None:intergenic 35.0%
CGGTTTGTGAATATTAGAGA+CGG + Chr4:51798045-51798064 MsG0480020997.01.T01:CDS 35.0%
CTCGCAATAAGTATATAGTG+TGG - Chr4:51799864-51799883 None:intergenic 35.0%
GAAATTTCGTAACATGAACG+AGG + Chr4:51800168-51800187 MsG0480020997.01.T01:CDS 35.0%
GAGTTTATGCATAATTCGAC+AGG - Chr4:51799407-51799426 None:intergenic 35.0%
GATCTATCAATTGTGGGATT+TGG - Chr4:51798637-51798656 None:intergenic 35.0%
GATTGCTTCCGAAAATGAAT+GGG + Chr4:51800264-51800283 MsG0480020997.01.T01:CDS 35.0%
GGTGCAGTTGAATTGAATTA+TGG + Chr4:51799252-51799271 MsG0480020997.01.T01:intron 35.0%
TAAAGGGAAAAGATTGAACC+TGG - Chr4:51797213-51797232 None:intergenic 35.0%
TACTTCAAAGCAACCACATA+TGG - Chr4:51798952-51798971 None:intergenic 35.0%
TAGTACGATTGAGAAGAGAA+GGG - Chr4:51797138-51797157 None:intergenic 35.0%
TCTAAGCCTAAAAGGTAAGT+GGG - Chr4:51799483-51799502 None:intergenic 35.0%
TGATTGCTTCCGAAAATGAA+TGG + Chr4:51800263-51800282 MsG0480020997.01.T01:CDS 35.0%
TGGAAAGAATTGAATGTGTG+TGG + Chr4:51797541-51797560 MsG0480020997.01.T01:intron 35.0%
TGGATTTGGATTTCCTATGA+AGG + Chr4:51798450-51798469 MsG0480020997.01.T01:intron 35.0%
! AAACAAGAGCACAATAGGAA+AGG - Chr4:51798768-51798787 None:intergenic 35.0%
! AAACTGTGTGTGTTTTATGC+AGG + Chr4:51798920-51798939 MsG0480020997.01.T01:intron 35.0%
! ATAGCAAACAAGAGCACAAT+AGG - Chr4:51798773-51798792 None:intergenic 35.0%
! CCAATGATGATCAATGGATT+TGG + Chr4:51798436-51798455 MsG0480020997.01.T01:intron 35.0%
! TTGATTTGAAAACGTGGAGA+AGG + Chr4:51797008-51797027 MsG0480020997.01.T01:five_prime_UTR 35.0%
! TTGCATTATGCTGCTTACTA+TGG + Chr4:51797837-51797856 MsG0480020997.01.T01:CDS 35.0%
!! CGAAATTTCCTTGATTTGCT+TGG - Chr4:51800157-51800176 None:intergenic 35.0%
!! GTTGCTTTGAAGTACAAACA+TGG + Chr4:51798958-51798977 MsG0480020997.01.T01:CDS 35.0%
!!! GGCTAAAGTTTTATTAGAGC+AGG + Chr4:51799068-51799087 MsG0480020997.01.T01:CDS 35.0%
!!! TAATTTTCAGGTTAGCGAGA+CGG + Chr4:51799892-51799911 MsG0480020997.01.T01:intron 35.0%
!!! TTTTGTCGATTCAACACATC+TGG - Chr4:51797470-51797489 None:intergenic 35.0%
AAAACCCAATTGGGGAACTT+GGG - Chr4:51797356-51797375 None:intergenic 40.0%
AACAGAATGTGCACACATTC+AGG - Chr4:51798114-51798133 None:intergenic 40.0%
AACGATGAGTCTGATAAGCT+TGG + Chr4:51798197-51798216 MsG0480020997.01.T01:intron 40.0%
AAGCGCCATATCTAAACTGA+TGG + Chr4:51800069-51800088 MsG0480020997.01.T01:CDS 40.0%
AATGGATGACAACATCTCTG+AGG + Chr4:51799173-51799192 MsG0480020997.01.T01:CDS 40.0%
AATTCAGACCCCACTTATGT+TGG + Chr4:51797624-51797643 MsG0480020997.01.T01:intron 40.0%
ACTCCGAATTATCAGATGGA+CGG - Chr4:51797259-51797278 None:intergenic 40.0%
ATCCGCGAATTATTAGCATG+GGG + Chr4:51798334-51798353 MsG0480020997.01.T01:CDS 40.0%
CATCCGCGAATTATTAGCAT+GGG + Chr4:51798333-51798352 MsG0480020997.01.T01:CDS 40.0%
CCTCTTCATTTAGCAGCTAA+AGG + Chr4:51798295-51798314 MsG0480020997.01.T01:CDS 40.0%
CCTTTAGCTGCTAAATGAAG+AGG - Chr4:51798298-51798317 None:intergenic 40.0%
CGATCATCATCATGTCAAAC+AGG + Chr4:51799604-51799623 MsG0480020997.01.T01:intron 40.0%
CTCATCAGCAAAAACACAAC+AGG - Chr4:51800318-51800337 None:intergenic 40.0%
CTCTAAGCCTAAAAGGTAAG+TGG - Chr4:51799484-51799503 None:intergenic 40.0%
CTGAACTCCGAATTATCAGA+TGG - Chr4:51797263-51797282 None:intergenic 40.0%
CTTCATTTAGCAGCTAAAGG+AGG + Chr4:51798298-51798317 MsG0480020997.01.T01:CDS 40.0%
GCAACTATGCTTGATAAGCA+AGG + Chr4:51800357-51800376 MsG0480020997.01.T01:three_prime_UTR 40.0%
GCATGGAAAGATTGAATGTG+TGG + Chr4:51797654-51797673 MsG0480020997.01.T01:CDS 40.0%
GCTATATTTGCAGATGTCCT+GGG + Chr4:51798266-51798285 MsG0480020997.01.T01:intron 40.0%
GGTAACTTCTAACCTACAGA+TGG - Chr4:51799561-51799580 None:intergenic 40.0%
GTAGTACGATTGAGAAGAGA+AGG - Chr4:51797139-51797158 None:intergenic 40.0%
GTGAATATTAGAGACGGTAG+AGG + Chr4:51798051-51798070 MsG0480020997.01.T01:CDS 40.0%
GTGCTTCAACTAGCAGATAT+GGG + Chr4:51798154-51798173 MsG0480020997.01.T01:CDS 40.0%
GTTTCAAGCCAAGCAAATCA+AGG + Chr4:51800146-51800165 MsG0480020997.01.T01:CDS 40.0%
TAGATTACAAGTCAGAGAGG+CGG - Chr4:51799769-51799788 None:intergenic 40.0%
TATTCAGACTAACTTGGCTG+TGG - Chr4:51796838-51796857 None:intergenic 40.0%
TGCTATATTTGCAGATGTCC+TGG + Chr4:51798265-51798284 MsG0480020997.01.T01:intron 40.0%
TGGTCATTCTTCTTGCCTTA+AGG + Chr4:51797857-51797876 MsG0480020997.01.T01:CDS 40.0%
TGTAGAGGTAGTCATGAACA+TGG + Chr4:51797052-51797071 MsG0480020997.01.T01:CDS 40.0%
TGTGCTTCAACTAGCAGATA+TGG + Chr4:51798153-51798172 MsG0480020997.01.T01:CDS 40.0%
TGTGTTGAATCGACAAAAGC+AGG + Chr4:51797472-51797491 MsG0480020997.01.T01:CDS 40.0%
TTGAAAACGTGGAGAAGGAT+GGG + Chr4:51797013-51797032 MsG0480020997.01.T01:exon 40.0%
TTTGAAAACGTGGAGAAGGA+TGG + Chr4:51797012-51797031 MsG0480020997.01.T01:exon 40.0%
! ACATGATGATGATCGCTTGA+TGG - Chr4:51799599-51799618 None:intergenic 40.0%
! ATTTTCGGAAGCAATCATCC+CGG - Chr4:51800260-51800279 None:intergenic 40.0%
! CAAAGTGGTCTTAGTTGTAG+AGG + Chr4:51797037-51797056 MsG0480020997.01.T01:CDS 40.0%
! CATGATGATGATCGCTTGAT+GGG - Chr4:51799598-51799617 None:intergenic 40.0%
! TACCTTTTAGGCTTAGAGCT+CGG + Chr4:51799486-51799505 MsG0480020997.01.T01:intron 40.0%
! TTTGCTTGGCTTGAAACAAG+TGG - Chr4:51800143-51800162 None:intergenic 40.0%
!! AATGATGATGGCCATACAAG+AGG - Chr4:51799021-51799040 None:intergenic 40.0%
!! CAGCAGAAAGTATTGCCTTA+AGG - Chr4:51797875-51797894 None:intergenic 40.0%
!! GACAACATCTCTGAGGTAAT+TGG + Chr4:51799180-51799199 MsG0480020997.01.T01:intron 40.0%
!! GCTTCTTGGTTAGTCCTTTT+CGG + Chr4:51797915-51797934 MsG0480020997.01.T01:intron 40.0%
AACACTCTGCTGTCACAACA+AGG + Chr4:51799997-51800016 MsG0480020997.01.T01:CDS 45.0%
AAGCAATCATCCCGGAACTA+CGG - Chr4:51800252-51800271 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAAGA+AGG - Chr4:51796917-51796936 None:intergenic 45.0%
ATCTCCACACTCTGATCGAA+TGG + Chr4:51799155-51799174 MsG0480020997.01.T01:CDS 45.0%
ATTCGATCAGAGTGTGGAGA+TGG - Chr4:51799156-51799175 None:intergenic 45.0%
CAAAACCCAATTGGGGAACT+TGG - Chr4:51797357-51797376 None:intergenic 45.0%
CACCCCATGCTAATAATTCG+CGG - Chr4:51798339-51798358 None:intergenic 45.0%
CACGAAGACATGGATCTAGA+CGG + Chr4:51800109-51800128 MsG0480020997.01.T01:CDS 45.0%
CATTGCTGCCAACATAAGTG+GGG - Chr4:51797635-51797654 None:intergenic 45.0%
CCTCCGTCCATCTGATAATT+CGG + Chr4:51797253-51797272 MsG0480020997.01.T01:intron 45.0%
CGAATTATTAGCATGGGGTG+CGG + Chr4:51798339-51798358 MsG0480020997.01.T01:CDS 45.0%
CTTATGTTGGCAGCAATGCA+TGG + Chr4:51797637-51797656 MsG0480020997.01.T01:CDS 45.0%
CTTCATATTGCTGCTGCCAA+TGG + Chr4:51797181-51797200 MsG0480020997.01.T01:CDS 45.0%
CTTCGACAGAATGGACAGAT+GGG - Chr4:51800052-51800071 None:intergenic 45.0%
GAAGTTACCAATGCGTGTAG+CGG + Chr4:51799572-51799591 MsG0480020997.01.T01:intron 45.0%
GAGAGAGAGAGAGAGAAGAA+GGG - Chr4:51796916-51796935 None:intergenic 45.0%
GCATCCGCGAATTATTAGCA+TGG + Chr4:51798332-51798351 MsG0480020997.01.T01:CDS 45.0%
GCATTGCTGCCAACATAAGT+GGG - Chr4:51797636-51797655 None:intergenic 45.0%
GGTAGAAACTCACGAAGACA+TGG + Chr4:51800099-51800118 MsG0480020997.01.T01:CDS 45.0%
GTGCACATTCTGTTGTGTAG+TGG + Chr4:51798120-51798139 MsG0480020997.01.T01:CDS 45.0%
GTGGAAAAGTTGCTTGAAGC+TGG + Chr4:51797673-51797692 MsG0480020997.01.T01:CDS 45.0%
TATATTGCAGGGGGTTTGCA+CGG + Chr4:51798025-51798044 MsG0480020997.01.T01:intron 45.0%
TCATCCATTCGATCAGAGTG+TGG - Chr4:51799162-51799181 None:intergenic 45.0%
TGCATTGCTGCCAACATAAG+TGG - Chr4:51797637-51797656 None:intergenic 45.0%
TGGCAGCAGCAATATGAAGA+GGG - Chr4:51797180-51797199 None:intergenic 45.0%
TGTGGAGATGGAAGAGAGTA+AGG - Chr4:51799144-51799163 None:intergenic 45.0%
TTGAACCTGGATCTGACCAT+TGG - Chr4:51797200-51797219 None:intergenic 45.0%
TTGGCAGCAGCAATATGAAG+AGG - Chr4:51797181-51797200 None:intergenic 45.0%
! ACCTTTTAGGCTTAGAGCTC+GGG + Chr4:51799487-51799506 MsG0480020997.01.T01:intron 45.0%
! CTCTTTCGTGCTGTTCAACA+TGG + Chr4:51797076-51797095 MsG0480020997.01.T01:CDS 45.0%
! CTGTGTGTGTTTTATGCAGG+CGG + Chr4:51798923-51798942 MsG0480020997.01.T01:intron 45.0%
! GCATGGCCTATTATTGGTTG+AGG + Chr4:51800619-51800638 MsG0480020997.01.T01:three_prime_UTR 45.0%
! GGAAAGGCATGGCCTATTAT+TGG + Chr4:51800613-51800632 MsG0480020997.01.T01:three_prime_UTR 45.0%
! GTCAAGCCCACTTACCTTTT+AGG + Chr4:51799474-51799493 MsG0480020997.01.T01:intron 45.0%
! TCTAAGGTAGCTCGTTGAGA+TGG - Chr4:51799521-51799540 None:intergenic 45.0%
!! AAATGAAGAGGAGTACTCCC+AGG - Chr4:51798286-51798305 None:intergenic 45.0%
!! AACAGGTGTCGACATCATTG+TGG - Chr4:51800301-51800320 None:intergenic 45.0%
!!! CAGCGTGCTTTTTCCTTCAT+AGG - Chr4:51798466-51798485 None:intergenic 45.0%
!!! AAAATTTGATTTTTTTTTTT+TGG + Chr4:51797401-51797420 MsG0480020997.01.T01:intron 5.0%
!!! AAATTTGATTTTTTTTTTTT+GGG + Chr4:51797402-51797421 MsG0480020997.01.T01:intron 5.0%
AAAATGAGCGGCCGTAGTTC+CGG + Chr4:51800238-51800257 MsG0480020997.01.T01:CDS 50.0%
ACAGAATGGACAGATGGGTG+GGG - Chr4:51800047-51800066 None:intergenic 50.0%
ACTAACCAAGAAGCAGCCAC+GGG - Chr4:51797909-51797928 None:intergenic 50.0%
AGACTAACTTGGCTGTGGCA+TGG - Chr4:51796833-51796852 None:intergenic 50.0%
AGAGAGAGAGAGAAGAAGGG+AGG - Chr4:51796913-51796932 None:intergenic 50.0%
AGGCATTATTGGACGCGAAC+AGG + Chr4:51799088-51799107 MsG0480020997.01.T01:CDS 50.0%
ATCTGGCAGCTCGTCAAAGA+CGG + Chr4:51798088-51798107 MsG0480020997.01.T01:CDS 50.0%
ATGCAGGCGGATACCATATG+TGG + Chr4:51798936-51798955 MsG0480020997.01.T01:intron 50.0%
ATTGGACGCGAACAGGGAAA+GGG + Chr4:51799095-51799114 MsG0480020997.01.T01:CDS 50.0%
CATCTGCACAGCCTCTTGTA+TGG + Chr4:51799007-51799026 MsG0480020997.01.T01:CDS 50.0%
CCGAATTATCAGATGGACGG+AGG - Chr4:51797256-51797275 None:intergenic 50.0%
GACAGAATGGACAGATGGGT+GGG - Chr4:51800048-51800067 None:intergenic 50.0%
GACTAACCAAGAAGCAGCCA+CGG - Chr4:51797910-51797929 None:intergenic 50.0%
GAGAGAGAGAGAAGAAGGGA+GGG - Chr4:51796912-51796931 None:intergenic 50.0%
GATATGGCGCTTCGACAGAA+TGG - Chr4:51800061-51800080 None:intergenic 50.0%
GCTTCGACAGAATGGACAGA+TGG - Chr4:51800053-51800072 None:intergenic 50.0%
GGCAGCAGCAATATGAAGAG+GGG - Chr4:51797179-51797198 None:intergenic 50.0%
GGCATTATTGGACGCGAACA+GGG + Chr4:51799089-51799108 MsG0480020997.01.T01:CDS 50.0%
GGCTTGACTAAGTCGTTACC+CGG - Chr4:51799462-51799481 None:intergenic 50.0%
GGGATGCGAAGTTGAAGTGT+TGG - Chr4:51800023-51800042 None:intergenic 50.0%
GGTAGCAGCAGCAGTTTCAA+GGG + Chr4:51800190-51800209 MsG0480020997.01.T01:CDS 50.0%
GTCTCCAACGTGATGCATCT+GGG + Chr4:51798365-51798384 MsG0480020997.01.T01:CDS 50.0%
GTGTGCATTGTGCACACATC+TGG - Chr4:51799976-51799995 None:intergenic 50.0%
TATTGGACGCGAACAGGGAA+AGG + Chr4:51799094-51799113 MsG0480020997.01.T01:CDS 50.0%
TGAGCCCAAGTTCCCCAATT+GGG + Chr4:51797349-51797368 MsG0480020997.01.T01:intron 50.0%
TGCATTGTGCACACATCTGG+TGG - Chr4:51799973-51799992 None:intergenic 50.0%
TGGAGAAGGATGGGTCAAAG+TGG + Chr4:51797022-51797041 MsG0480020997.01.T01:exon 50.0%
TGTACCCAGATGCATCACGT+TGG - Chr4:51798372-51798391 None:intergenic 50.0%
TTGAGCCCAAGTTCCCCAAT+TGG + Chr4:51797348-51797367 MsG0480020997.01.T01:intron 50.0%
TTGGGGAACTTGGGCTCAAA+TGG - Chr4:51797347-51797366 None:intergenic 50.0%
! AGGTGCTACACCATTGCATC+TGG + Chr4:51798071-51798090 MsG0480020997.01.T01:CDS 50.0%
! ATGCTGCATCTGCTTTGAGC+AGG + Chr4:51799919-51799938 MsG0480020997.01.T01:CDS 50.0%
! CCTTTTAGGCTTAGAGCTCG+GGG + Chr4:51799488-51799507 MsG0480020997.01.T01:intron 50.0%
AAATGAGCGGCCGTAGTTCC+GGG + Chr4:51800239-51800258 MsG0480020997.01.T01:CDS 55.0%
AATGGACAGATGGGTGGGGT+GGG - Chr4:51800043-51800062 None:intergenic 55.0%
ACATCTGGTGGCCACAGTCT+TGG - Chr4:51799961-51799980 None:intergenic 55.0%
AGAGAGAGAAGAAGGGAGGG+AGG - Chr4:51796909-51796928 None:intergenic 55.0%
AGGGAGGGACAGTGTCACAT+AGG - Chr4:51796893-51796912 None:intergenic 55.0%
CGACAGAATGGACAGATGGG+TGG - Chr4:51800049-51800068 None:intergenic 55.0%
CGTCTCCAACGTGATGCATC+TGG + Chr4:51798364-51798383 MsG0480020997.01.T01:CDS 55.0%
GACTAAGTCGTTACCCGGCT+GGG - Chr4:51799457-51799476 None:intergenic 55.0%
GAGAGAGAAGAAGGGAGGGA+GGG - Chr4:51796908-51796927 None:intergenic 55.0%
GGGTAGCAGCAGCAGTTTCA+AGG + Chr4:51800189-51800208 MsG0480020997.01.T01:CDS 55.0%
TGACGAGCTGCCAGATGCAA+TGG - Chr4:51798084-51798103 None:intergenic 55.0%
TGACTAAGTCGTTACCCGGC+TGG - Chr4:51799458-51799477 None:intergenic 55.0%
TGCTGCCAATGGTCAGATCC+AGG + Chr4:51797192-51797211 MsG0480020997.01.T01:CDS 55.0%
TGCTGCTCAATCTAGTCCCG+TGG + Chr4:51797890-51797909 MsG0480020997.01.T01:CDS 55.0%
!! CCCCGAGCTCTAAGCCTAAA+AGG - Chr4:51799491-51799510 None:intergenic 55.0%
CTAGTCCCGTGGCTGCTTCT+TGG + Chr4:51797901-51797920 MsG0480020997.01.T01:CDS 60.0%
GAATGGACAGATGGGTGGGG+TGG - Chr4:51800044-51800063 None:intergenic 60.0%
! TGATGGGCCGCTACACGCAT+TGG - Chr4:51799582-51799601 None:intergenic 60.0%
!! TTTGGCTCTGCTGTCCCAGC+CGG + Chr4:51799440-51799459 MsG0480020997.01.T01:intron 60.0%
!! TTGGCTCTGCTGTCCCAGCC+GGG + Chr4:51799441-51799460 MsG0480020997.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 51796799 51800638 51796799 ID=MsG0480020997.01;Name=MsG0480020997.01
Chr4 mRNA 51796799 51800638 51796799 ID=MsG0480020997.01.T01;Parent=MsG0480020997.01;Name=MsG0480020997.01.T01;_AED=0.26;_eAED=0.26;_QI=232|1|1|1|1|1|8|332|447
Chr4 exon 51796799 51797213 51796799 ID=MsG0480020997.01.T01:exon:2817;Parent=MsG0480020997.01.T01
Chr4 exon 51797434 51797493 51797434 ID=MsG0480020997.01.T01:exon:2818;Parent=MsG0480020997.01.T01
Chr4 exon 51797631 51797702 51797631 ID=MsG0480020997.01.T01:exon:2819;Parent=MsG0480020997.01.T01
Chr4 exon 51797801 51797922 51797801 ID=MsG0480020997.01.T01:exon:2820;Parent=MsG0480020997.01.T01
Chr4 exon 51798035 51798175 51798035 ID=MsG0480020997.01.T01:exon:2821;Parent=MsG0480020997.01.T01
Chr4 exon 51798279 51798386 51798279 ID=MsG0480020997.01.T01:exon:2822;Parent=MsG0480020997.01.T01
Chr4 exon 51798942 51799194 51798942 ID=MsG0480020997.01.T01:exon:2823;Parent=MsG0480020997.01.T01
Chr4 exon 51799902 51800638 51799902 ID=MsG0480020997.01.T01:exon:2824;Parent=MsG0480020997.01.T01
Chr4 five_prime_UTR 51796799 51797030 51796799 ID=MsG0480020997.01.T01:five_prime_utr;Parent=MsG0480020997.01.T01
Chr4 CDS 51797031 51797213 51797031 ID=MsG0480020997.01.T01:cds;Parent=MsG0480020997.01.T01
Chr4 CDS 51797434 51797493 51797434 ID=MsG0480020997.01.T01:cds;Parent=MsG0480020997.01.T01
Chr4 CDS 51797631 51797702 51797631 ID=MsG0480020997.01.T01:cds;Parent=MsG0480020997.01.T01
Chr4 CDS 51797801 51797922 51797801 ID=MsG0480020997.01.T01:cds;Parent=MsG0480020997.01.T01
Chr4 CDS 51798035 51798175 51798035 ID=MsG0480020997.01.T01:cds;Parent=MsG0480020997.01.T01
Chr4 CDS 51798279 51798386 51798279 ID=MsG0480020997.01.T01:cds;Parent=MsG0480020997.01.T01
Chr4 CDS 51798942 51799194 51798942 ID=MsG0480020997.01.T01:cds;Parent=MsG0480020997.01.T01
Chr4 CDS 51799902 51800306 51799902 ID=MsG0480020997.01.T01:cds;Parent=MsG0480020997.01.T01
Chr4 three_prime_UTR 51800307 51800638 51800307 ID=MsG0480020997.01.T01:three_prime_utr;Parent=MsG0480020997.01.T01
Gene Sequence

>MsG0480020997.01.T01

ATGGGTCAAAGTGGTCTTAGTTGTAGAGGTAGTCATGAACATGGACTCTTTCGTGCTGTTCAACATGGTGACCTGAAAACTGTTTCTACTCTTTTACAGACTCACCCTTCTCTTCTCAATCGTACTACTGTTTATGATCATCATTCCCCTCTTCATATTGCTGCTGCCAATGGTCAGATCCAGGTTTTATCTAAGCTTTTAGATGGATCTGCGAATCCAGATGTGTTGAATCGACAAAAGCAGACCCCACTTATGTTGGCAGCAATGCATGGAAAGATTGAATGTGTGGAAAAGTTGCTTGAAGCTGGTGCTAATGTTTTAATGTTTGATGTGTGTCATGGAAGAACTTGCTTGCATTATGCTGCTTACTATGGTCATTCTTCTTGCCTTAAGGCAATACTTTCTGCTGCTCAATCTAGTCCCGTGGCTGCTTCTTGGGGGTTTGCACGGTTTGTGAATATTAGAGACGGTAGAGGTGCTACACCATTGCATCTGGCAGCTCGTCAAAGACGGCCTGAATGTGTGCACATTCTGTTGTGTAGTGGAGCTCTTGTTTGTGCTTCAACTAGCAGATATGGATGTCCTGGGAGTACTCCTCTTCATTTAGCAGCTAAAGGAGGATCTCTCGATTGCATCCGCGAATTATTAGCATGGGGTGCGGATCGTCTCCAACGTGATGCATCTGGGCGGATACCATATGTGGTTGCTTTGAAGTACAAACATGGAGCATGTGCAGCATTGCTAAATCTTTCATCTGCACAGCCTCTTGTATGGCCATCATCATTGAAGATAATCAGTGAACTTAATCCAGAGGCTAAAGTTTTATTAGAGCAGGCATTATTGGACGCGAACAGGGAAAGGGAGAAAAACATATTGAAAGGCAGTCCTTACTCTCTTCCATCTCCACACTCTGATCGAATGGATGACAACATCTCTGAGGTTAGCGAGACGGAATTATGCTGCATCTGCTTTGAGCAGGTGTGTATAATTGAAGTCCAAGACTGTGGCCACCAGATGTGTGCACAATGCACACTAACACTCTGCTGTCACAACAAGGCCAACACTTCAACTTCGCATCCCACCCCACCCATCTGTCCATTCTGTCGAAGCGCCATATCTAAACTGATGGTTATCAAGGTAGAAACTCACGAAGACATGGATCTAGACGGCGCTGATACCACTTGTTTCAAGCCAAGCAAATCAAGGAAATTTCGTAACATGAACGAGGGTAGCAGCAGCAGTTTCAAGGGATTGTCCAATGTAAATTCATTCGGAAAAATGAGCGGCCGTAGTTCCGGGATGATTGCTTCCGAAAATGAATGGGTTGATGATAAGCCACAATGA
Protein sequence

>MsG0480020997.01.T01

MGQSGLSCRGSHEHGLFRAVQHGDLKTVSTLLQTHPSLLNRTTVYDHHSPLHIAAANGQIQVLSKLLDGSANPDVLNRQKQTPLMLAAMHGKIECVEKLLEAGANVLMFDVCHGRTCLHYAAYYGHSSCLKAILSAAQSSPVAASWGFARFVNIRDGRGATPLHLAARQRRPECVHILLCSGALVCASTSRYGCPGSTPLHLAAKGGSLDCIRELLAWGADRLQRDASGRIPYVVALKYKHGACAALLNLSSAQPLVWPSSLKIISELNPEAKVLLEQALLDANREREKNILKGSPYSLPSPHSDRMDDNISEVSETELCCICFEQVCIIEVQDCGHQMCAQCTLTLCCHNKANTSTSHPTPPICPFCRSAISKLMVIKVETHEDMDLDGADTTCFKPSKSRKFRNMNEGSSSSFKGLSNVNSFGKMSGRSSGMIASENEWVDDKPQ*