AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045721.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045721.01.T01 MTR_8g077540 60.753 186 16 5 1 130 27 211 1.64e-51 162
MsG0880045721.01.T01 MTR_8g077540 60.753 186 16 5 1 130 1 185 1.64e-51 161
MsG0880045721.01.T01 MTR_8g077540 73.529 68 13 3 1 64 1 67 5.05e-12 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045721.01.T01 AT2G18390 57.527 186 22 5 1 130 1 185 5.18e-47 150

Find 68 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGATTGGTATTGGGTTTC+TGG 0.139028 8:+63315446 MsG0880045721.01.T01:five_prime_UTR
TGCAGTGGGTTGGACAATTC+AGG 0.241231 8:+63316838 MsG0880045721.01.T01:intron
CTTACCTTAGCTATTTCTTC+TGG 0.265683 8:-63319327 None:intergenic
CCTTCCAATGATAGCATATT+GGG 0.270391 8:-63320386 None:intergenic
AGCAATAAACAAGATATTAA+AGG 0.286443 8:+63319294 MsG0880045721.01.T01:CDS
TTCATATGACAGAGACTATC+TGG 0.297820 8:+63319253 MsG0880045721.01.T01:intron
TTGAGCTTTGAACCCTTTCA+TGG 0.314698 8:-63320342 None:intergenic
GCCTTCCAATGATAGCATAT+TGG 0.324468 8:-63320387 None:intergenic
TTAAATGATTGAATAGAAAA+AGG 0.334821 8:-63320455 None:intergenic
AAACTACATTGATTGGTATT+GGG 0.337517 8:+63315439 MsG0880045721.01.T01:five_prime_UTR
TATTGGGTTTCTGGTGGGTC+TGG 0.341150 8:+63315455 MsG0880045721.01.T01:five_prime_UTR
CATAAAGTGATGCTTATTAT+AGG 0.346711 8:-63320590 None:intergenic
GGAGAAGGAAATGCGAATTA+TGG 0.359367 8:+63316739 MsG0880045721.01.T01:CDS
TAACCCCAATATGCTATCAT+TGG 0.371800 8:+63320382 MsG0880045721.01.T01:three_prime_UTR
GAAACTACATTGATTGGTAT+TGG 0.376657 8:+63315438 MsG0880045721.01.T01:five_prime_UTR
GTTTATTGCTAGAATTAGTA+AGG 0.416331 8:-63319281 None:intergenic
TTGGTCTTCTGTCTAGGAAT+GGG 0.420437 8:+63316683 MsG0880045721.01.T01:exon
TACTAAGCTTATTTACTGTA+AGG 0.423718 8:+63320494 MsG0880045721.01.T01:three_prime_UTR
ACTGGTGAGGGCTTGCTTGA+GGG 0.425615 8:+63320249 MsG0880045721.01.T01:CDS
TTTGGTCTTCTGTCTAGGAA+TGG 0.430509 8:+63316682 MsG0880045721.01.T01:exon
GGGATTTGATTGGTTGGTCC+AGG 0.450854 8:+63320269 MsG0880045721.01.T01:CDS
TCAGGTTTGGTCTTCTGTCT+AGG 0.452386 8:+63316677 MsG0880045721.01.T01:intron
AACTGCGCAGGTGTTGAACT+TGG 0.453484 8:+63320176 MsG0880045721.01.T01:intron
GCTTGCTTGAGGGATTTGAT+TGG 0.453614 8:+63320259 MsG0880045721.01.T01:CDS
GTTGCTGAAACTACATTGAT+TGG 0.460649 8:+63315432 MsG0880045721.01.T01:five_prime_UTR
TGGAACATCTTAAGAGATGC+AGG 0.468133 8:-63320416 None:intergenic
GCCAAGCAACACTCACCATA+TGG 0.469195 8:-63315496 None:intergenic
GCTTGAGGGATTTGATTGGT+TGG 0.472113 8:+63320263 MsG0880045721.01.T01:CDS
TAGCTATTTCTTCTGGTGCA+AGG 0.473584 8:-63319320 None:intergenic
ATTGGTATTGGGTTTCTGGT+GGG 0.483145 8:+63315450 MsG0880045721.01.T01:five_prime_UTR
GCAGTGGGTTGGACAATTCA+GGG 0.493312 8:+63316839 MsG0880045721.01.T01:intron
TGGGTCTTCTCAGCATCATC+GGG 0.494249 8:+63316702 MsG0880045721.01.T01:CDS
AGCTATTTCTTCTGGTGCAA+GGG 0.494608 8:-63319319 None:intergenic
GATTGGTATTGGGTTTCTGG+TGG 0.501496 8:+63315449 MsG0880045721.01.T01:five_prime_UTR
CACTGGTGAGGGCTTGCTTG+AGG 0.504277 8:+63320248 MsG0880045721.01.T01:CDS
ATGGGTCTTCTCAGCATCAT+CGG 0.508138 8:+63316701 MsG0880045721.01.T01:CDS
TACAGAGGCGGAACACCATA+TGG 0.509187 8:+63315481 MsG0880045721.01.T01:five_prime_UTR
TCTCGACACTGGATGATAGT+TGG 0.513687 8:+63320213 MsG0880045721.01.T01:CDS
TTGAACCCTTTCATGGATGT+CGG 0.522681 8:-63320335 None:intergenic
CATCGGGAAAATTAAGAAGA+AGG 0.523356 8:+63316718 MsG0880045721.01.T01:CDS
GAAAATTAAGAAGAAGGAGA+AGG 0.526706 8:+63316724 MsG0880045721.01.T01:CDS
TTTGAAGATTAACGGGGAGG+AGG 0.533361 8:+63316876 MsG0880045721.01.T01:CDS
TCATGCCGACATCCATGAAA+GGG 0.547915 8:+63320330 MsG0880045721.01.T01:three_prime_UTR
TTTGATGTTGAATCCAAGGT+AGG 0.552732 8:-63316916 None:intergenic
CCCAATATGCTATCATTGGA+AGG 0.553661 8:+63320386 MsG0880045721.01.T01:three_prime_UTR
TTTACTAATATATATACTGA+GGG 0.558476 8:-63320557 None:intergenic
ACCATATGGTGAGTGTTGCT+TGG 0.559548 8:+63315495 MsG0880045721.01.T01:five_prime_UTR
GGTGTTGAACTTGGAAGCGA+TGG 0.561088 8:+63320185 MsG0880045721.01.T01:intron
GCAATTGTTATGCAGTGGGT+TGG 0.563288 8:+63316828 MsG0880045721.01.T01:intron
AGATTCTAGAGGCTATGTCC+TGG 0.564870 8:-63320287 None:intergenic
CTGTAGTGCGTACACTGGTG+AGG 0.567647 8:+63320236 MsG0880045721.01.T01:CDS
CTCATGCCGACATCCATGAA+AGG 0.575343 8:+63320329 MsG0880045721.01.T01:three_prime_UTR
TAGCGTCATCAGTCCTACCT+TGG 0.580064 8:+63316903 MsG0880045721.01.T01:CDS
AAAATGTTGTGAGAAGAAGA+GGG 0.581125 8:-63315623 None:intergenic
TGCACCAGAAGAAATAGCTA+AGG 0.599602 8:+63319323 MsG0880045721.01.T01:CDS
TGTAGTGCGTACACTGGTGA+GGG 0.614788 8:+63320237 MsG0880045721.01.T01:CDS
CGATGGATAAATCTCGACAC+TGG 0.617621 8:+63320202 MsG0880045721.01.T01:CDS
GTCGAGCAAGTAGATTCTAG+AGG 0.639725 8:-63320298 None:intergenic
GTTGGCTGTAGTGCGTACAC+TGG 0.644179 8:+63320231 MsG0880045721.01.T01:CDS
CTAATATATATACTGAGGGG+AGG 0.649697 8:-63320553 None:intergenic
TGGTGGGTCTGGTCTTACAG+AGG 0.652856 8:+63315466 MsG0880045721.01.T01:five_prime_UTR
AAATTGGGGCAATATCTATG+TGG 0.653183 8:-63315518 None:intergenic
CTTCCAATGATAGCATATTG+GGG 0.655001 8:-63320385 None:intergenic
TGGGTCTGGTCTTACAGAGG+CGG 0.659094 8:+63315469 MsG0880045721.01.T01:five_prime_UTR
AAATGTTGTGAGAAGAAGAG+GGG 0.673554 8:-63315622 None:intergenic
GGAACATCTTAAGAGATGCA+GGG 0.677683 8:-63320415 None:intergenic
TTACTAATATATATACTGAG+GGG 0.714830 8:-63320556 None:intergenic
ACATCTTAAGAGATGCAGGG+AGG 0.747657 8:-63320412 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAATCTAACAT+TGG + Chr8:63317942-63317961 MsG0880045721.01.T01:intron 10.0%
!! TATTGTATGAAAAAAAAATT+GGG - Chr8:63315536-63315555 None:intergenic 10.0%
!!! TAAATATATTACTTTTGTTT+TGG + Chr8:63318476-63318495 MsG0880045721.01.T01:intron 10.0%
!! AATTAAATTATAACCCTTAA+AGG + Chr8:63315984-63316003 MsG0880045721.01.T01:intron 15.0%
!! ATTACCAATATAGAAAAAAA+GGG - Chr8:63316637-63316656 None:intergenic 15.0%
!! ATTGTATGAAAAAAAAATTG+GGG - Chr8:63315535-63315554 None:intergenic 15.0%
!! CAAATAAATAAATTGAAAGT+TGG - Chr8:63319960-63319979 None:intergenic 15.0%
!! CTTACTTTATCAAAATTAAA+GGG + Chr8:63316179-63316198 MsG0880045721.01.T01:intron 15.0%
!! GTATTGTATGAAAAAAAAAT+TGG - Chr8:63315537-63315556 None:intergenic 15.0%
!! TTAAATGATTGAATAGAAAA+AGG - Chr8:63320458-63320477 None:intergenic 15.0%
!! TTTACTAATATATATACTGA+GGG - Chr8:63320560-63320579 None:intergenic 15.0%
!!! TAATATACTTTTGTTTTATG+AGG + Chr8:63317147-63317166 MsG0880045721.01.T01:intron 15.0%
!!! TTCATTTTTATGACAATATA+TGG + Chr8:63319852-63319871 MsG0880045721.01.T01:intron 15.0%
!!! TTTTAATTCTTTTTACGAAA+TGG - Chr8:63317922-63317941 None:intergenic 15.0%
!!! TTTTACTAATATATATACTG+AGG - Chr8:63320561-63320580 None:intergenic 15.0%
!!! TTTTTTTTCTTTAAATGCTT+TGG + Chr8:63317223-63317242 MsG0880045721.01.T01:intron 15.0%
!! AAAAAAGCAAATTGATTATC+AGG + Chr8:63316659-63316678 MsG0880045721.01.T01:intron 20.0%
!! AAAATAACTAAAGATTGCTT+TGG - Chr8:63319093-63319112 None:intergenic 20.0%
!! AATCAACAGATCAAATAAAA+GGG - Chr8:63318883-63318902 None:intergenic 20.0%
!! ACTTCTCATTGTTAATAATT+TGG + Chr8:63319165-63319184 MsG0880045721.01.T01:intron 20.0%
!! AGAAAAATAAAAATGGACAT+CGG - Chr8:63317016-63317035 None:intergenic 20.0%
!! AGCAATAAACAAGATATTAA+AGG + Chr8:63319294-63319313 MsG0880045721.01.T01:CDS 20.0%
!! ATAACTATGACAAGAAAAAT+AGG + Chr8:63316255-63316274 MsG0880045721.01.T01:intron 20.0%
!! ATAGTTATATACTGAAATTG+GGG - Chr8:63316243-63316262 None:intergenic 20.0%
!! CATAGTTATATACTGAAATT+GGG - Chr8:63316244-63316263 None:intergenic 20.0%
!! CCTTACTTTATCAAAATTAA+AGG + Chr8:63316178-63316197 MsG0880045721.01.T01:intron 20.0%
!! CTTCTCATTGTTAATAATTT+GGG + Chr8:63319166-63319185 MsG0880045721.01.T01:intron 20.0%
!! GATTACCAATATAGAAAAAA+AGG - Chr8:63316638-63316657 None:intergenic 20.0%
!! TAATCAACAGATCAAATAAA+AGG - Chr8:63318884-63318903 None:intergenic 20.0%
!! TCATAGTTATATACTGAAAT+TGG - Chr8:63316245-63316264 None:intergenic 20.0%
!! TTACCAATATAGAAAAAAAG+GGG - Chr8:63316636-63316655 None:intergenic 20.0%
!! TTACTAATATATATACTGAG+GGG - Chr8:63320559-63320578 None:intergenic 20.0%
!!! AAATAAATTAGTGATTTGTG+AGG - Chr8:63316980-63316999 None:intergenic 20.0%
!!! AGTGTTTTTCATCATAATTT+TGG - Chr8:63316599-63316618 None:intergenic 20.0%
!!! CCTTTAATTTTGATAAAGTA+AGG - Chr8:63316181-63316200 None:intergenic 20.0%
!!! GTGTTTTTCATCATAATTTT+GGG - Chr8:63316598-63316617 None:intergenic 20.0%
!!! TATGTTAAGTCATCATTTTT+AGG + Chr8:63317046-63317065 MsG0880045721.01.T01:intron 20.0%
!!! TTAATTGAGCAGTTTTATTT+TGG - Chr8:63315970-63315989 None:intergenic 20.0%
!!! TTCTGTTTTTCTGATTTTTT+GGG + Chr8:63317821-63317840 MsG0880045721.01.T01:intron 20.0%
! AAATGGTCAAGATTACAATT+GGG - Chr8:63317905-63317924 None:intergenic 25.0%
! AATGATTGAATAGAAAAAGG+AGG - Chr8:63320455-63320474 None:intergenic 25.0%
! AATTCAATAATGTGACCAAA+GGG + Chr8:63317509-63317528 MsG0880045721.01.T01:intron 25.0%
! AGGATATTCAGTAATTCTTA+AGG + Chr8:63318842-63318861 MsG0880045721.01.T01:intron 25.0%
! ATAATGGTAGAATTGTGTTA+TGG + Chr8:63316391-63316410 MsG0880045721.01.T01:intron 25.0%
! ATTGTGAGATATATGCAAAT+AGG - Chr8:63316362-63316381 None:intergenic 25.0%
! CAATGACATAAAAAACTTTG+AGG + Chr8:63316132-63316151 MsG0880045721.01.T01:intron 25.0%
! CATAAAGTGATGCTTATTAT+AGG - Chr8:63320593-63320612 None:intergenic 25.0%
! CATGTACATAAAAAATACGT+AGG + Chr8:63319701-63319720 MsG0880045721.01.T01:intron 25.0%
! CTAAGCGTAAAAATTAACTA+AGG + Chr8:63320045-63320064 MsG0880045721.01.T01:intron 25.0%
! CTATTAAACAAACCTATTTG+TGG + Chr8:63319565-63319584 MsG0880045721.01.T01:intron 25.0%
! GATTCAAAAAAGTAACTTCT+TGG + Chr8:63316205-63316224 MsG0880045721.01.T01:intron 25.0%
! GCAAACGAGAAAAATAAAAA+TGG - Chr8:63317023-63317042 None:intergenic 25.0%
! GTTTATTGCTAGAATTAGTA+AGG - Chr8:63319284-63319303 None:intergenic 25.0%
! TACATCTAAATACTTAACTG+AGG + Chr8:63318822-63318841 MsG0880045721.01.T01:intron 25.0%
! TACCAATATAGAAAAAAAGG+GGG - Chr8:63316635-63316654 None:intergenic 25.0%
! TACTAAGCTTATTTACTGTA+AGG + Chr8:63320494-63320513 MsG0880045721.01.T01:three_prime_UTR 25.0%
! TGATGTAATAACACATACAT+AGG + Chr8:63319789-63319808 MsG0880045721.01.T01:intron 25.0%
! TTACTGTCAACATAATAGAT+TGG + Chr8:63318798-63318817 MsG0880045721.01.T01:intron 25.0%
! TTATCTTAATAACTACTCGT+CGG + Chr8:63319522-63319541 MsG0880045721.01.T01:intron 25.0%
! TTTCAAATAAACCATCTCAT+CGG - Chr8:63319218-63319237 None:intergenic 25.0%
! TTTGTTTACCTAGTTTCTTA+CGG + Chr8:63317312-63317331 MsG0880045721.01.T01:intron 25.0%
!! AAACTACATTGATTGGTATT+GGG + Chr8:63315439-63315458 MsG0880045721.01.T01:five_prime_UTR 25.0%
!! AAGGTAAGCTTAATTTTATC+TGG + Chr8:63319342-63319361 MsG0880045721.01.T01:intron 25.0%
!! AGGTAAGCTTAATTTTATCT+GGG + Chr8:63319343-63319362 MsG0880045721.01.T01:intron 25.0%
!! TATTCCTAAGCATTCATTTT+AGG - Chr8:63318955-63318974 None:intergenic 25.0%
!! TCACAATAGAATGTTGATAA+TGG + Chr8:63316375-63316394 MsG0880045721.01.T01:intron 25.0%
!! TGTAGTAAAATCTAGAATGA+TGG - Chr8:63316788-63316807 None:intergenic 25.0%
!! TTTTATGTGAATATGAAGCT+GGG + Chr8:63320518-63320537 MsG0880045721.01.T01:three_prime_UTR 25.0%
!! TTTTTATGTGAATATGAAGC+TGG + Chr8:63320517-63320536 MsG0880045721.01.T01:three_prime_UTR 25.0%
!!! AAGTATTTATATGCTGGTTT+TGG - Chr8:63319149-63319168 None:intergenic 25.0%
!!! AATGAGAAGTATTTATATGC+TGG - Chr8:63319155-63319174 None:intergenic 25.0%
!!! ACAATCGTTTTGAAGATTAA+CGG + Chr8:63316868-63316887 MsG0880045721.01.T01:CDS 25.0%
!!! AGTCATCATTTTTAGGAATT+AGG + Chr8:63317053-63317072 MsG0880045721.01.T01:intron 25.0%
!!! CTCAAAGTTTTTTATGTCAT+TGG - Chr8:63316134-63316153 None:intergenic 25.0%
!!! GGCTTTATAATAAAGTTTTG+CGG + Chr8:63318237-63318256 MsG0880045721.01.T01:intron 25.0%
!!! GTTCTGTTTTTCTGATTTTT+TGG + Chr8:63317820-63317839 MsG0880045721.01.T01:intron 25.0%
AAAAAACCATTCGATCTTAC+TGG + Chr8:63318648-63318667 MsG0880045721.01.T01:intron 30.0%
AAAAAGTAACTTCTTGGCTT+TGG + Chr8:63316211-63316230 MsG0880045721.01.T01:intron 30.0%
AAAAATGTTGTGAGAAGAAG+AGG - Chr8:63315627-63315646 None:intergenic 30.0%
AAAACTGAATTCATCGAAGA+CGG - Chr8:63316088-63316107 None:intergenic 30.0%
AAAATGTTGTGAGAAGAAGA+GGG - Chr8:63315626-63315645 None:intergenic 30.0%
AAATTATACCTGAACCACAA+TGG + Chr8:63320086-63320105 MsG0880045721.01.T01:intron 30.0%
AACCTATACAAACAGTTCAA+GGG - Chr8:63315839-63315858 None:intergenic 30.0%
AAGAAAAATAGGTAAGCACA+AGG + Chr8:63316266-63316285 MsG0880045721.01.T01:intron 30.0%
AAGATTGGATGATTGCAAAA+TGG + Chr8:63318729-63318748 MsG0880045721.01.T01:intron 30.0%
AATATTTACCAATGCTTCAG+TGG + Chr8:63318971-63318990 MsG0880045721.01.T01:intron 30.0%
AATCATTCAAACTGTTAGGT+AGG + Chr8:63315779-63315798 MsG0880045721.01.T01:intron 30.0%
AATTATACCTGAACCACAAT+GGG + Chr8:63320087-63320106 MsG0880045721.01.T01:intron 30.0%
AGCAAATTGATTATCAGGTT+TGG + Chr8:63316664-63316683 MsG0880045721.01.T01:intron 30.0%
AGGGTTTCAGAATTAAGATT+GGG + Chr8:63315707-63315726 MsG0880045721.01.T01:intron 30.0%
CATATAAAATGATGCAGGTT+AGG + Chr8:63319637-63319656 MsG0880045721.01.T01:intron 30.0%
CATGTGATATGCTTCTTAAT+TGG + Chr8:63317175-63317194 MsG0880045721.01.T01:intron 30.0%
CATGTGCATATATTTACAGT+TGG - Chr8:63315902-63315921 None:intergenic 30.0%
CCTAACAGTTTGAATGATTA+AGG - Chr8:63315778-63315797 None:intergenic 30.0%
CCTTAATCATTCAAACTGTT+AGG + Chr8:63315775-63315794 MsG0880045721.01.T01:intron 30.0%
CTCAATATTTGTAGGGATAA+GGG - Chr8:63318088-63318107 None:intergenic 30.0%
CTTGATACTCTTTAACTAGA+CGG + Chr8:63319448-63319467 MsG0880045721.01.T01:intron 30.0%
GAAAATTAAGAAGAAGGAGA+AGG + Chr8:63316724-63316743 MsG0880045721.01.T01:CDS 30.0%
GAAATGGTCAAGATTACAAT+TGG - Chr8:63317906-63317925 None:intergenic 30.0%
GAATTCAATAATGTGACCAA+AGG + Chr8:63317508-63317527 MsG0880045721.01.T01:intron 30.0%
GACTACATATAAAATGATGC+AGG + Chr8:63319632-63319651 MsG0880045721.01.T01:intron 30.0%
GATATGCTTCTTAATTGGTA+CGG + Chr8:63317180-63317199 MsG0880045721.01.T01:intron 30.0%
GTAAGAAACTAGGTAAACAA+AGG - Chr8:63317313-63317332 None:intergenic 30.0%
GTATGTTAAGGTAGATACTT+GGG + Chr8:63317637-63317656 MsG0880045721.01.T01:intron 30.0%
TAACAAAGAGTCGTATCTAA+AGG - Chr8:63319665-63319684 None:intergenic 30.0%
TACAATGTTGAGAGTAATGT+AGG + Chr8:63315940-63315959 MsG0880045721.01.T01:intron 30.0%
TAGAAAGCAACATTTCCTAT+AGG - Chr8:63319548-63319567 None:intergenic 30.0%
TAGGGTTTCAGAATTAAGAT+TGG + Chr8:63315706-63315725 MsG0880045721.01.T01:intron 30.0%
TATGTTAAGGTAGATACTTG+GGG + Chr8:63317638-63317657 MsG0880045721.01.T01:intron 30.0%
TGATCTTGCATATTGTGTAA+TGG - Chr8:63317275-63317294 None:intergenic 30.0%
TGCATATTGTGTAATGGTAA+AGG - Chr8:63317269-63317288 None:intergenic 30.0%
TGTATGTTAAGGTAGATACT+TGG + Chr8:63317636-63317655 MsG0880045721.01.T01:intron 30.0%
TTAAAAACTATTTCCCCAAC+AGG - Chr8:63319062-63319081 None:intergenic 30.0%
TTAAACAAACCTATTTGTGG+CGG + Chr8:63319568-63319587 MsG0880045721.01.T01:intron 30.0%
TTATAACCCTTAAAGGTTTG+AGG + Chr8:63315991-63316010 MsG0880045721.01.T01:intron 30.0%
TTATCTAAATTGACAATGGC+AGG + Chr8:63318594-63318613 MsG0880045721.01.T01:intron 30.0%
TTATGTTTAAGCTTGTGACT+AGG + Chr8:63318371-63318390 MsG0880045721.01.T01:intron 30.0%
TTGATACTCTTTAACTAGAC+GGG + Chr8:63319449-63319468 MsG0880045721.01.T01:intron 30.0%
TTGGTATGATTCTTCAATCT+GGG + Chr8:63318495-63318514 MsG0880045721.01.T01:intron 30.0%
TTTGGTATGATTCTTCAATC+TGG + Chr8:63318494-63318513 MsG0880045721.01.T01:intron 30.0%
! AATGAGAGAAGTTTTACTTC+TGG - Chr8:63316953-63316972 None:intergenic 30.0%
! GAAACTACATTGATTGGTAT+TGG + Chr8:63315438-63315457 MsG0880045721.01.T01:five_prime_UTR 30.0%
! GGCTTTATCTAAATTGACAA+TGG + Chr8:63318590-63318609 MsG0880045721.01.T01:intron 30.0%
! TAATACTCTGCTGTATTTTG+TGG + Chr8:63315860-63315879 MsG0880045721.01.T01:intron 30.0%
! TGAGTAACAAAAAAGTGTGT+CGG + Chr8:63317426-63317445 MsG0880045721.01.T01:intron 30.0%
!! TCTAGTTAAAGAGTATCAAG+TGG - Chr8:63319448-63319467 None:intergenic 30.0%
!!! AATCGTTTTGAAGATTAACG+GGG + Chr8:63316870-63316889 MsG0880045721.01.T01:CDS 30.0%
!!! ACAACATTTTTTCTAAGCCA+AGG + Chr8:63315636-63315655 MsG0880045721.01.T01:five_prime_UTR 30.0%
!!! AGTAAGATCGAATGGTTTTT+TGG - Chr8:63318649-63318668 None:intergenic 30.0%
!!! CAATCGTTTTGAAGATTAAC+GGG + Chr8:63316869-63316888 MsG0880045721.01.T01:CDS 30.0%
!!! CACTAAATGTCATTTTTCGT+AGG - Chr8:63318007-63318026 None:intergenic 30.0%
!!! TGTTTTTCTGATTTTTTGGG+TGG + Chr8:63317824-63317843 MsG0880045721.01.T01:intron 30.0%
!!! TTCCCCCTTTTTTTCTATAT+TGG + Chr8:63316630-63316649 MsG0880045721.01.T01:intron 30.0%
AAAAAAGGGGGAAAAAACAG+TGG - Chr8:63316623-63316642 None:intergenic 35.0%
AAAAACAGAACAGATGCACA+AGG - Chr8:63317811-63317830 None:intergenic 35.0%
AAATGTTGTGAGAAGAAGAG+GGG - Chr8:63315625-63315644 None:intergenic 35.0%
AAATTGGGGCAATATCTATG+TGG - Chr8:63315521-63315540 None:intergenic 35.0%
AACAATGACCGTAAGAAACT+AGG - Chr8:63317323-63317342 None:intergenic 35.0%
AACTACTTTGAGCAAACAGA+TGG + Chr8:63318674-63318693 MsG0880045721.01.T01:intron 35.0%
AACTTGTGCATTTACCTGTT+GGG + Chr8:63319045-63319064 MsG0880045721.01.T01:intron 35.0%
AAGAGGTCTGTTCATACAAA+TGG + Chr8:63318773-63318792 MsG0880045721.01.T01:intron 35.0%
AAGGAGGTAAAAATTCGATG+TGG - Chr8:63320439-63320458 None:intergenic 35.0%
AATAGGTAAGCACAAGGTTA+AGG + Chr8:63316272-63316291 MsG0880045721.01.T01:intron 35.0%
ACTCTAAACATATGGGATGT+TGG + Chr8:63318620-63318639 MsG0880045721.01.T01:intron 35.0%
ACTTCTCTTGAAGTTATCCA+GGG - Chr8:63319881-63319900 None:intergenic 35.0%
AGTTGCAATTGTTATGCAGT+GGG + Chr8:63316824-63316843 MsG0880045721.01.T01:intron 35.0%
ATAATGTGACCAAAGGGTTA+AGG + Chr8:63317515-63317534 MsG0880045721.01.T01:intron 35.0%
ATCCTAGGGATTGTATGTTA+AGG + Chr8:63317625-63317644 MsG0880045721.01.T01:intron 35.0%
ATCTTGATTCTGACAACTTG+AGG + Chr8:63318569-63318588 MsG0880045721.01.T01:intron 35.0%
ATGACAATATATGGAAACCC+TGG + Chr8:63319861-63319880 MsG0880045721.01.T01:intron 35.0%
ATGTTAAGGTAGATACTTGG+GGG + Chr8:63317639-63317658 MsG0880045721.01.T01:intron 35.0%
ATTCACAATCCAGATCGTTA+GGG - Chr8:63317400-63317419 None:intergenic 35.0%
CAGATCTAGACATTCAACAT+TGG - Chr8:63316561-63316580 None:intergenic 35.0%
CAGGTACACTCTAAACATAT+GGG + Chr8:63318613-63318632 MsG0880045721.01.T01:intron 35.0%
CATCGGGAAAATTAAGAAGA+AGG + Chr8:63316718-63316737 MsG0880045721.01.T01:CDS 35.0%
CATTTGTAGAAAGACACATC+GGG - Chr8:63317597-63317616 None:intergenic 35.0%
CCATTTGTAGAAAGACACAT+CGG - Chr8:63317598-63317617 None:intergenic 35.0%
CCTTCCAATGATAGCATATT+GGG - Chr8:63320389-63320408 None:intergenic 35.0%
CTAATATATATACTGAGGGG+AGG - Chr8:63320556-63320575 None:intergenic 35.0%
CTCAATGATACTCTCTTCTT+TGG + Chr8:63319192-63319211 MsG0880045721.01.T01:intron 35.0%
CTTCCAATGATAGCATATTG+GGG - Chr8:63320388-63320407 None:intergenic 35.0%
GAACCTATACAAACAGTTCA+AGG - Chr8:63315840-63315859 None:intergenic 35.0%
GCTCAATATTTGTAGGGATA+AGG - Chr8:63318089-63318108 None:intergenic 35.0%
GTAAGTGTCTATTTGTCTGT+AGG - Chr8:63317985-63318004 None:intergenic 35.0%
GTCATAATTATCTTCCTGCA+AGG + Chr8:63319493-63319512 MsG0880045721.01.T01:intron 35.0%
GTTGCCTAAAATGAATGCTT+AGG + Chr8:63318948-63318967 MsG0880045721.01.T01:intron 35.0%
GTTGCTGAAACTACATTGAT+TGG + Chr8:63315432-63315451 MsG0880045721.01.T01:five_prime_UTR 35.0%
TAACCCCAATATGCTATCAT+TGG + Chr8:63320382-63320401 MsG0880045721.01.T01:three_prime_UTR 35.0%
TACCTTAACATACAATCCCT+AGG - Chr8:63317630-63317649 None:intergenic 35.0%
TAGTTGCAATTGTTATGCAG+TGG + Chr8:63316823-63316842 MsG0880045721.01.T01:intron 35.0%
TATCTATCAGCCAATTCTCA+AGG - Chr8:63319418-63319437 None:intergenic 35.0%
TATGTGAATAGAACGTGCTT+TGG + Chr8:63317077-63317096 MsG0880045721.01.T01:intron 35.0%
TATGTGTGATGTTCAACAGT+TGG - Chr8:63316037-63316056 None:intergenic 35.0%
TATTCACAATCCAGATCGTT+AGG - Chr8:63317401-63317420 None:intergenic 35.0%
TATTTGGCATGCTACCATTT+GGG + Chr8:63317459-63317478 MsG0880045721.01.T01:intron 35.0%
TCATACATACCACAAGAACA+TGG - Chr8:63319614-63319633 None:intergenic 35.0%
TCTGTTGAAACATTACTGCA+AGG - Chr8:63319916-63319935 None:intergenic 35.0%
TGAAACCCTAAACAAGTGAT+TGG - Chr8:63315696-63315715 None:intergenic 35.0%
TGCACAAGTTCTCATAAGAA+AGG - Chr8:63319035-63319054 None:intergenic 35.0%
TGTCTTTCTACAAATGGTGT+TGG + Chr8:63317601-63317620 MsG0880045721.01.T01:intron 35.0%
TTATTTGGCATGCTACCATT+TGG + Chr8:63317458-63317477 MsG0880045721.01.T01:intron 35.0%
TTCACTCCTCAAACCTTTAA+GGG - Chr8:63316000-63316019 None:intergenic 35.0%
TTCATATGACAGAGACTATC+TGG + Chr8:63319253-63319272 MsG0880045721.01.T01:intron 35.0%
TTTGATGTTGAATCCAAGGT+AGG - Chr8:63316919-63316938 None:intergenic 35.0%
TTTGTGGCGGTAAAAAGATA+TGG + Chr8:63319581-63319600 MsG0880045721.01.T01:intron 35.0%
! AGAGAAGTTTTACTTCTGGT+AGG - Chr8:63316949-63316968 None:intergenic 35.0%
! AGATAACCTTCTAAAGGAAG+AGG + Chr8:63318756-63318775 MsG0880045721.01.T01:intron 35.0%
! AGGGATAAGGGTATAATTGT+TGG - Chr8:63318076-63318095 None:intergenic 35.0%
! AGTAACAAAAAAGTGTGTCG+GGG + Chr8:63317428-63317447 MsG0880045721.01.T01:intron 35.0%
! ATCTTTTTACCGCCACAAAT+AGG - Chr8:63319580-63319599 None:intergenic 35.0%
! ATTGATTGGTATTGGGTTTC+TGG + Chr8:63315446-63315465 MsG0880045721.01.T01:five_prime_UTR 35.0%
! GAGAATTGATTGACTTACCT+TGG - Chr8:63315656-63315675 None:intergenic 35.0%
! GAGTAACAAAAAAGTGTGTC+GGG + Chr8:63317427-63317446 MsG0880045721.01.T01:intron 35.0%
! GGATAAGGGTATAATTGTTG+GGG - Chr8:63318074-63318093 None:intergenic 35.0%
! GGGATAAGGGTATAATTGTT+GGG - Chr8:63318075-63318094 None:intergenic 35.0%
! TCACGTTTTCATATTTCGCA+GGG - Chr8:63318295-63318314 None:intergenic 35.0%
! TGTTTTCGGATCCTTTTGTT+TGG + Chr8:63317680-63317699 MsG0880045721.01.T01:intron 35.0%
! TTCACGTTTTCATATTTCGC+AGG - Chr8:63318296-63318315 None:intergenic 35.0%
! TTTTAGGCAACTACTATGCT+TGG - Chr8:63318939-63318958 None:intergenic 35.0%
!! CTTACCTTAGCTATTTCTTC+TGG - Chr8:63319330-63319349 None:intergenic 35.0%
!! TAGCTGTTTTCGTGAAACAA+GGG + Chr8:63320019-63320038 MsG0880045721.01.T01:intron 35.0%
!! TTAGCTGTTTTCGTGAAACA+AGG + Chr8:63320018-63320037 MsG0880045721.01.T01:intron 35.0%
!!! TGGTTTTGATGTTGAATCCA+AGG - Chr8:63316923-63316942 None:intergenic 35.0%
!!! TGTATTTTGTGGTGCTGTAT+AGG + Chr8:63315871-63315890 MsG0880045721.01.T01:intron 35.0%
!!! TTCTGATTTTTTGGGTGGTT+TGG + Chr8:63317829-63317848 MsG0880045721.01.T01:intron 35.0%
AAACATAAACGACTCAAGCC+AGG - Chr8:63318359-63318378 None:intergenic 40.0%
AACAGACCTCTTCCTTTAGA+AGG - Chr8:63318765-63318784 None:intergenic 40.0%
ACAATTGGGCCTCTAATTGT+AGG - Chr8:63317891-63317910 None:intergenic 40.0%
ACTTGTGCATTTACCTGTTG+GGG + Chr8:63319046-63319065 MsG0880045721.01.T01:intron 40.0%
ACTTTGAGCAAACAGATGGT+TGG + Chr8:63318678-63318697 MsG0880045721.01.T01:intron 40.0%
AGATCTTGCATCAGATCGAA+TGG - Chr8:63318553-63318572 None:intergenic 40.0%
ATCTTGCATCAGATCGAATG+GGG - Chr8:63318551-63318570 None:intergenic 40.0%
CACTTCTCTTGAAGTTATCC+AGG - Chr8:63319882-63319901 None:intergenic 40.0%
CCCAATATGCTATCATTGGA+AGG + Chr8:63320386-63320405 MsG0880045721.01.T01:three_prime_UTR 40.0%
CCGATGTGTCTTTCTACAAA+TGG + Chr8:63317595-63317614 MsG0880045721.01.T01:intron 40.0%
CCTAAACAAGTGATTGGAGA+CGG - Chr8:63315690-63315709 None:intergenic 40.0%
CGTCTCCAATCACTTGTTTA+GGG + Chr8:63315688-63315707 MsG0880045721.01.T01:intron 40.0%
CTAAACATATGGGATGTTGG+AGG + Chr8:63318623-63318642 MsG0880045721.01.T01:intron 40.0%
CTAGACATTCAACATTGGTG+CGG - Chr8:63316556-63316575 None:intergenic 40.0%
CTTCTTAATTGGTACGGTTG+TGG + Chr8:63317186-63317205 MsG0880045721.01.T01:intron 40.0%
GAAAGGAAAGTAGCTGCTAA+CGG - Chr8:63319018-63319037 None:intergenic 40.0%
GAACTTGTGCATTTACCTGT+TGG + Chr8:63319044-63319063 MsG0880045721.01.T01:intron 40.0%
GAGTGAAATCGCTAAATCGA+GGG - Chr8:63317375-63317394 None:intergenic 40.0%
GATCTTGCATCAGATCGAAT+GGG - Chr8:63318552-63318571 None:intergenic 40.0%
GCAGGTACACTCTAAACATA+TGG + Chr8:63318612-63318631 MsG0880045721.01.T01:intron 40.0%
GCCTTCCAATGATAGCATAT+TGG - Chr8:63320390-63320409 None:intergenic 40.0%
GCTTGGATACATTAGCAAAG+AGG - Chr8:63318922-63318941 None:intergenic 40.0%
GGAACATCTTAAGAGATGCA+GGG - Chr8:63320418-63320437 None:intergenic 40.0%
GGAGAAGGAAATGCGAATTA+TGG + Chr8:63316739-63316758 MsG0880045721.01.T01:CDS 40.0%
GGAGCTAGATAACCTTCTAA+AGG + Chr8:63318750-63318769 MsG0880045721.01.T01:intron 40.0%
GGGTCAAACTAGTATCTCTT+GGG + Chr8:63320107-63320126 MsG0880045721.01.T01:intron 40.0%
GTAGACAATCTCATCTAGCA+AGG - Chr8:63319758-63319777 None:intergenic 40.0%
GTTCACTCCTCAAACCTTTA+AGG - Chr8:63316001-63316020 None:intergenic 40.0%
GTTTCTCCAGTAAGATCGAA+TGG - Chr8:63318657-63318676 None:intergenic 40.0%
GTTTGAGGAGTGAACTATGT+AGG + Chr8:63316006-63316025 MsG0880045721.01.T01:intron 40.0%
TAGCTGCTAACGGAATAAAC+AGG - Chr8:63319008-63319027 None:intergenic 40.0%
TGAGTGAAATCGCTAAATCG+AGG - Chr8:63317376-63317395 None:intergenic 40.0%
TGCACCAGAAGAAATAGCTA+AGG + Chr8:63319323-63319342 MsG0880045721.01.T01:CDS 40.0%
TGCCCTTGAACTGTTTGTAT+AGG + Chr8:63315834-63315853 MsG0880045721.01.T01:intron 40.0%
TGGAACATCTTAAGAGATGC+AGG - Chr8:63320419-63320438 None:intergenic 40.0%
TGGGTCAAACTAGTATCTCT+TGG + Chr8:63320106-63320125 MsG0880045721.01.T01:intron 40.0%
TTCACAATCCAGATCGTTAG+GGG - Chr8:63317399-63317418 None:intergenic 40.0%
TTGAACCCTTTCATGGATGT+CGG - Chr8:63320338-63320357 None:intergenic 40.0%
! ACAAATGGTGTTGGAATCCT+AGG + Chr8:63317610-63317629 MsG0880045721.01.T01:intron 40.0%
! AGCTTTTCACAACACCCAAA+TGG - Chr8:63317476-63317495 None:intergenic 40.0%
! ATTTTATCTGGGCCTGATCT+TGG + Chr8:63319354-63319373 MsG0880045721.01.T01:intron 40.0%
! CAAATGGTGTTGGAATCCTA+GGG + Chr8:63317611-63317630 MsG0880045721.01.T01:intron 40.0%
! GATACTAGTTTGACCCATTG+TGG - Chr8:63320103-63320122 None:intergenic 40.0%
! GTTTTACTTCTGGTAGGTGA+TGG - Chr8:63316943-63316962 None:intergenic 40.0%
! TCTAGAATGATGGAGAGAAC+AGG - Chr8:63316778-63316797 None:intergenic 40.0%
! TTGGTCTTCTGTCTAGGAAT+GGG + Chr8:63316683-63316702 MsG0880045721.01.T01:exon 40.0%
! TTTGGTCTTCTGTCTAGGAA+TGG + Chr8:63316682-63316701 MsG0880045721.01.T01:exon 40.0%
!! AAAAAAGTGTGTCGGGGTTT+TGG + Chr8:63317434-63317453 MsG0880045721.01.T01:intron 40.0%
!! AAACAGTTCAAGGGCATTCA+CGG - Chr8:63315830-63315849 None:intergenic 40.0%
!! AGATACTTGGGGGTATGTTT+TGG + Chr8:63317649-63317668 MsG0880045721.01.T01:intron 40.0%
!! AGCAAACAGATGGTTGGTTT+GGG + Chr8:63318684-63318703 MsG0880045721.01.T01:intron 40.0%
!! AGCTATTTCTTCTGGTGCAA+GGG - Chr8:63319322-63319341 None:intergenic 40.0%
!! ATACTTGGGGGTATGTTTTG+GGG + Chr8:63317651-63317670 MsG0880045721.01.T01:intron 40.0%
!! ATTGGTATTGGGTTTCTGGT+GGG + Chr8:63315450-63315469 MsG0880045721.01.T01:five_prime_UTR 40.0%
!! GATACTTGGGGGTATGTTTT+GGG + Chr8:63317650-63317669 MsG0880045721.01.T01:intron 40.0%
!! TAGCTATTTCTTCTGGTGCA+AGG - Chr8:63319323-63319342 None:intergenic 40.0%
!! TTGAGCTTTGAACCCTTTCA+TGG - Chr8:63320345-63320364 None:intergenic 40.0%
!!! TTTTGGGGAGTTGCTGTTTT+CGG + Chr8:63317666-63317685 MsG0880045721.01.T01:intron 40.0%
!!! TTTTTGGGTGGTTTGGCTTA+GGG + Chr8:63317836-63317855 MsG0880045721.01.T01:intron 40.0%
!!! TTTTTTGGGTGGTTTGGCTT+AGG + Chr8:63317835-63317854 MsG0880045721.01.T01:intron 40.0%
AAAGGGTTAAGGAATGGTGG+AGG + Chr8:63317526-63317545 MsG0880045721.01.T01:intron 45.0%
AACAAGAAGTGAAAAGCCGC+TGG - Chr8:63318213-63318232 None:intergenic 45.0%
AACAAGTGATTGGAGACGGA+AGG - Chr8:63315686-63315705 None:intergenic 45.0%
ACAAGAAGTGAAAAGCCGCT+GGG - Chr8:63318212-63318231 None:intergenic 45.0%
ACAGCATGGCACCAAACAAA+AGG - Chr8:63317694-63317713 None:intergenic 45.0%
ACATCTTAAGAGATGCAGGG+AGG - Chr8:63320415-63320434 None:intergenic 45.0%
ACCAAAGGGTTAAGGAATGG+TGG + Chr8:63317523-63317542 MsG0880045721.01.T01:intron 45.0%
AGGACATTAAGGTGATGTCG+TGG + Chr8:63317546-63317565 MsG0880045721.01.T01:intron 45.0%
AGTTTGACCCATTGTGGTTC+AGG - Chr8:63320097-63320116 None:intergenic 45.0%
ATAACTACTCGTCGGCCTAT+AGG + Chr8:63319530-63319549 MsG0880045721.01.T01:intron 45.0%
ATATTGAGCCCCCCCATAAT+TGG + Chr8:63318100-63318119 MsG0880045721.01.T01:intron 45.0%
ATGGGTCTTCTCAGCATCAT+CGG + Chr8:63316701-63316720 MsG0880045721.01.T01:CDS 45.0%
CAACAACACAGGAGAAAAGC+CGG - Chr8:63318182-63318201 None:intergenic 45.0%
CAGTTCGGATCTGAGAAGAT+TGG + Chr8:63318714-63318733 MsG0880045721.01.T01:intron 45.0%
CCAGGATCGTTAGAATCGTA+TGG - Chr8:63318341-63318360 None:intergenic 45.0%
CCATACGATTCTAACGATCC+TGG + Chr8:63318338-63318357 MsG0880045721.01.T01:intron 45.0%
CCGTCTCCAATCACTTGTTT+AGG + Chr8:63315687-63315706 MsG0880045721.01.T01:intron 45.0%
CGATGGATAAATCTCGACAC+TGG + Chr8:63320202-63320221 MsG0880045721.01.T01:CDS 45.0%
GCAATTGTTATGCAGTGGGT+TGG + Chr8:63316828-63316847 MsG0880045721.01.T01:intron 45.0%
GCTTGAGGGATTTGATTGGT+TGG + Chr8:63320263-63320282 MsG0880045721.01.T01:CDS 45.0%
GCTTGCTTGAGGGATTTGAT+TGG + Chr8:63320259-63320278 MsG0880045721.01.T01:CDS 45.0%
GGACATTAAGGTGATGTCGT+GGG + Chr8:63317547-63317566 MsG0880045721.01.T01:intron 45.0%
GGCTGTTAACCATGTTCTTG+TGG + Chr8:63319602-63319621 MsG0880045721.01.T01:intron 45.0%
GGGCCTCTAATTGTAGGAAA+CGG - Chr8:63317885-63317904 None:intergenic 45.0%
GGGTATAATTGTTGGGGTGT+AGG - Chr8:63318068-63318087 None:intergenic 45.0%
GGTTTGGGTAGTTGACAGTT+CGG + Chr8:63318699-63318718 MsG0880045721.01.T01:intron 45.0%
GTCGAGCAAGTAGATTCTAG+AGG - Chr8:63320301-63320320 None:intergenic 45.0%
GTGACCAAAGGGTTAAGGAA+TGG + Chr8:63317520-63317539 MsG0880045721.01.T01:intron 45.0%
TAAGATAAGTGCAGCCTTGC+AGG - Chr8:63319510-63319529 None:intergenic 45.0%
TAGGCAAATACGACTGCACT+TGG - Chr8:63316343-63316362 None:intergenic 45.0%
TCATGCCGACATCCATGAAA+GGG + Chr8:63320330-63320349 MsG0880045721.01.T01:three_prime_UTR 45.0%
TCCACCATTCCTTAACCCTT+TGG - Chr8:63317527-63317546 None:intergenic 45.0%
TCGCAGGGATTTACTCAACT+CGG - Chr8:63318280-63318299 None:intergenic 45.0%
TCTCGACACTGGATGATAGT+TGG + Chr8:63320213-63320232 MsG0880045721.01.T01:CDS 45.0%
TGCTGTATCCACTGAAGCAT+TGG - Chr8:63318982-63319001 None:intergenic 45.0%
TGGGCACAAAACAACAACAC+AGG - Chr8:63318193-63318212 None:intergenic 45.0%
TTAAGGTGATGTCGTGGGAA+TGG + Chr8:63317552-63317571 MsG0880045721.01.T01:intron 45.0%
TTTGAAGATTAACGGGGAGG+AGG + Chr8:63316876-63316895 MsG0880045721.01.T01:CDS 45.0%
! ACCATATGGTGAGTGTTGCT+TGG + Chr8:63315495-63315514 MsG0880045721.01.T01:five_prime_UTR 45.0%
! AGATTCTAGAGGCTATGTCC+TGG - Chr8:63320290-63320309 None:intergenic 45.0%
! AGCGGCTTTTCACTTCTTGT+TGG + Chr8:63318212-63318231 MsG0880045721.01.T01:intron 45.0%
! AGGAATGGTGGAGGACATTA+AGG + Chr8:63317535-63317554 MsG0880045721.01.T01:intron 45.0%
! CGGCTTTTCACTTCTTGTTG+GGG + Chr8:63318214-63318233 MsG0880045721.01.T01:intron 45.0%
! GAGCAAACAGATGGTTGGTT+TGG + Chr8:63318683-63318702 MsG0880045721.01.T01:intron 45.0%
! GATTGGTATTGGGTTTCTGG+TGG + Chr8:63315449-63315468 MsG0880045721.01.T01:five_prime_UTR 45.0%
! GCGGCTTTTCACTTCTTGTT+GGG + Chr8:63318213-63318232 MsG0880045721.01.T01:intron 45.0%
! GCTTTTCACTTCTTGTTGGG+GGG + Chr8:63318216-63318235 MsG0880045721.01.T01:intron 45.0%
! GGCTTTTCACTTCTTGTTGG+GGG + Chr8:63318215-63318234 MsG0880045721.01.T01:intron 45.0%
! GGGTGTTGTGAAAAGCTAGA+AGG + Chr8:63317479-63317498 MsG0880045721.01.T01:intron 45.0%
! TCAGGTTTGGTCTTCTGTCT+AGG + Chr8:63316677-63316696 MsG0880045721.01.T01:intron 45.0%
!! AGTAACTTCTTGGCTTTGGC+AGG + Chr8:63316215-63316234 MsG0880045721.01.T01:intron 45.0%
!!! CGTTTTGAAGATTAACGGGG+AGG + Chr8:63316873-63316892 MsG0880045721.01.T01:CDS 45.0%
!!! TGTCGGGGTTTTGGCTTATT+TGG + Chr8:63317443-63317462 MsG0880045721.01.T01:intron 45.0%
!!! TGTTGTTGTTTTGTGCCCAG+CGG + Chr8:63318194-63318213 MsG0880045721.01.T01:intron 45.0%
!!! TGTTTGGTGCCATGCTGTTT+TGG + Chr8:63317696-63317715 MsG0880045721.01.T01:intron 45.0%
AGCTAGGCCTCCAATTATGG+GGG - Chr8:63318113-63318132 None:intergenic 50.0%
CAGAATCCCGATCAGAATCG+CGG + Chr8:63317345-63317364 MsG0880045721.01.T01:intron 50.0%
CCTGCGAAGTTACCAAGATC+AGG - Chr8:63319369-63319388 None:intergenic 50.0%
CGCAGGGATTTACTCAACTC+GGG - Chr8:63318279-63318298 None:intergenic 50.0%
CTAATTGTAGGAAACGGCCC+TGG - Chr8:63317879-63317898 None:intergenic 50.0%
CTAGAATTACCCATGCCCCA+GGG + Chr8:63316296-63316315 MsG0880045721.01.T01:intron 50.0%
CTCATGCCGACATCCATGAA+AGG + Chr8:63320329-63320348 MsG0880045721.01.T01:three_prime_UTR 50.0%
CTCTTCTTTGGCCGATGAGA+TGG + Chr8:63319204-63319223 MsG0880045721.01.T01:intron 50.0%
CTGATATGCTCTAACTGCGC+AGG + Chr8:63320164-63320183 MsG0880045721.01.T01:intron 50.0%
GAGCTAGGCCTCCAATTATG+GGG - Chr8:63318114-63318133 None:intergenic 50.0%
GCCAAGCAACACTCACCATA+TGG - Chr8:63315499-63315518 None:intergenic 50.0%
GGAGCTAGGCCTCCAATTAT+GGG - Chr8:63318115-63318134 None:intergenic 50.0%
GGGCCGTTTCCTACAATTAG+AGG + Chr8:63317879-63317898 MsG0880045721.01.T01:intron 50.0%
GGGGGGGCTCAATATTTGTA+GGG - Chr8:63318095-63318114 None:intergenic 50.0%
TACAGAGGCGGAACACCATA+TGG + Chr8:63315481-63315500 MsG0880045721.01.T01:five_prime_UTR 50.0%
TAGCGTCATCAGTCCTACCT+TGG + Chr8:63316903-63316922 MsG0880045721.01.T01:CDS 50.0%
TGGAGCTAGGCCTCCAATTA+TGG - Chr8:63318116-63318135 None:intergenic 50.0%
TGGGGGGGCTCAATATTTGT+AGG - Chr8:63318096-63318115 None:intergenic 50.0%
TGGGTCTTCTCAGCATCATC+GGG + Chr8:63316702-63316721 MsG0880045721.01.T01:CDS 50.0%
TGTAGTGCGTACACTGGTGA+GGG + Chr8:63320237-63320256 MsG0880045721.01.T01:CDS 50.0%
TTCACTCACCCCTAACGATC+TGG + Chr8:63317388-63317407 MsG0880045721.01.T01:intron 50.0%
TTTCTATGCTCCCATGCCCT+GGG - Chr8:63316315-63316334 None:intergenic 50.0%
! AATTTTGGGCCATGACGCGA+GGG - Chr8:63316584-63316603 None:intergenic 50.0%
! CCTGATCTTGGTAACTTCGC+AGG + Chr8:63319366-63319385 MsG0880045721.01.T01:intron 50.0%
! GGGATTTGATTGGTTGGTCC+AGG + Chr8:63320269-63320288 MsG0880045721.01.T01:CDS 50.0%
! GGGTTTTCCGCGATTCTGAT+CGG - Chr8:63317355-63317374 None:intergenic 50.0%
! GGTGTTGAACTTGGAAGCGA+TGG + Chr8:63320185-63320204 MsG0880045721.01.T01:intron 50.0%
! GGTTTTCCGCGATTCTGATC+GGG - Chr8:63317354-63317373 None:intergenic 50.0%
! TAATTTTGGGCCATGACGCG+AGG - Chr8:63316585-63316604 None:intergenic 50.0%
!! AACTGCGCAGGTGTTGAACT+TGG + Chr8:63320176-63320195 MsG0880045721.01.T01:intron 50.0%
!! GCAGTGGGTTGGACAATTCA+GGG + Chr8:63316839-63316858 MsG0880045721.01.T01:intron 50.0%
!! TATTGGGTTTCTGGTGGGTC+TGG + Chr8:63315455-63315474 MsG0880045721.01.T01:five_prime_UTR 50.0%
!! TGCAGTGGGTTGGACAATTC+AGG + Chr8:63316838-63316857 MsG0880045721.01.T01:intron 50.0%
AGTTCAGGGCTGTGGCTTCT+CGG + Chr8:63317741-63317760 MsG0880045721.01.T01:intron 55.0%
CCTAGAATTACCCATGCCCC+AGG + Chr8:63316295-63316314 MsG0880045721.01.T01:intron 55.0%
CCTGGGGCATGGGTAATTCT+AGG - Chr8:63316298-63316317 None:intergenic 55.0%
CTAGGCCTCCAATTATGGGG+GGG - Chr8:63318111-63318130 None:intergenic 55.0%
CTGTAGTGCGTACACTGGTG+AGG + Chr8:63320236-63320255 MsG0880045721.01.T01:CDS 55.0%
CTTTCTATGCTCCCATGCCC+TGG - Chr8:63316316-63316335 None:intergenic 55.0%
GCAAGGAGCTCTATGGAGCT+AGG - Chr8:63318129-63318148 None:intergenic 55.0%
GCTAGGCCTCCAATTATGGG+GGG - Chr8:63318112-63318131 None:intergenic 55.0%
GGCAAGAGCAAGGAGCTCTA+TGG - Chr8:63318136-63318155 None:intergenic 55.0%
GTTGGCTGTAGTGCGTACAC+TGG + Chr8:63320231-63320250 MsG0880045721.01.T01:CDS 55.0%
TTCTATGCTCCCATGCCCTG+GGG - Chr8:63316314-63316333 None:intergenic 55.0%
TTGAGCCCCCCCATAATTGG+AGG + Chr8:63318103-63318122 MsG0880045721.01.T01:intron 55.0%
! ACTGGTGAGGGCTTGCTTGA+GGG + Chr8:63320249-63320268 MsG0880045721.01.T01:CDS 55.0%
! TGGGTGGTTTGGCTTAGGGT+TGG + Chr8:63317840-63317859 MsG0880045721.01.T01:intron 55.0%
!! TGGGTCTGGTCTTACAGAGG+CGG + Chr8:63315469-63315488 MsG0880045721.01.T01:five_prime_UTR 55.0%
!! TGGTGGGTCTGGTCTTACAG+AGG + Chr8:63315466-63315485 MsG0880045721.01.T01:five_prime_UTR 55.0%
!!! TGCCATGCTGTTTTGGCGCT+GGG + Chr8:63317703-63317722 MsG0880045721.01.T01:intron 55.0%
AGGAAACGGCCCTGGCTACA+CGG - Chr8:63317871-63317890 None:intergenic 60.0%
ATTACCCATGCCCCAGGGCA+TGG + Chr8:63316301-63316320 MsG0880045721.01.T01:intron 60.0%
CACCCAGCGCCAAAACAGCA+TGG - Chr8:63317708-63317727 None:intergenic 60.0%
CTAGATCTGCCCTCGCGTCA+TGG + Chr8:63316572-63316591 MsG0880045721.01.T01:intron 60.0%
GAGAAGCCACAGCCCTGAAC+TGG - Chr8:63317742-63317761 None:intergenic 60.0%
GGCTGCGGTCTTCCAGTTCA+GGG + Chr8:63317727-63317746 MsG0880045721.01.T01:intron 60.0%
GGTCTTCCAGTTCAGGGCTG+TGG + Chr8:63317733-63317752 MsG0880045721.01.T01:intron 60.0%
TCCTTGCTCTTGCCCAGCGA+CGG + Chr8:63318142-63318161 MsG0880045721.01.T01:intron 60.0%
TGGCTGCGGTCTTCCAGTTC+AGG + Chr8:63317726-63317745 MsG0880045721.01.T01:intron 60.0%
TTACCCATGCCCCAGGGCAT+GGG + Chr8:63316302-63316321 MsG0880045721.01.T01:intron 60.0%
! CACTGGTGAGGGCTTGCTTG+AGG + Chr8:63320248-63320267 MsG0880045721.01.T01:CDS 60.0%
!! TTGGCCTTGCCGTGTAGCCA+GGG + Chr8:63317859-63317878 MsG0880045721.01.T01:intron 60.0%
!!! CATGCTGTTTTGGCGCTGGG+TGG + Chr8:63317706-63317725 MsG0880045721.01.T01:intron 60.0%
!!! GTGCCATGCTGTTTTGGCGC+TGG + Chr8:63317702-63317721 MsG0880045721.01.T01:intron 60.0%
AGGGCTGTGGCTTCTCGGCA+GGG + Chr8:63317746-63317765 MsG0880045721.01.T01:intron 65.0%
CCTTGCTCTTGCCCAGCGAC+GGG + Chr8:63318143-63318162 MsG0880045721.01.T01:intron 65.0%
!! GAAAAGCCGGTGCTGCACGC+AGG - Chr8:63318169-63318188 None:intergenic 65.0%
!! GTTGGCCTTGCCGTGTAGCC+AGG + Chr8:63317858-63317877 MsG0880045721.01.T01:intron 65.0%
!! GTTTTGGCGCTGGGTGGCTG+CGG + Chr8:63317712-63317731 MsG0880045721.01.T01:intron 65.0%
ACGGCCCTGGCTACACGGCA+AGG - Chr8:63317866-63317885 None:intergenic 70.0%
CAGGGCTGTGGCTTCTCGGC+AGG + Chr8:63317745-63317764 MsG0880045721.01.T01:intron 70.0%
CCCGTCGCTGGGCAAGAGCA+AGG - Chr8:63318146-63318165 None:intergenic 70.0%
CTCGGCAGGGGGTCTGTCTG+TGG + Chr8:63317759-63317778 MsG0880045721.01.T01:intron 70.0%
GCTCCCATGCCCTGGGGCAT+GGG - Chr8:63316308-63316327 None:intergenic 70.0%
GGCTGTGGCTTCTCGGCAGG+GGG + Chr8:63317748-63317767 MsG0880045721.01.T01:intron 70.0%
GGGCTGTGGCTTCTCGGCAG+GGG + Chr8:63317747-63317766 MsG0880045721.01.T01:intron 70.0%
TGCTCCCATGCCCTGGGGCA+TGG - Chr8:63316309-63316328 None:intergenic 70.0%
CTGCACGCAGGCCCGTCGCT+GGG - Chr8:63318157-63318176 None:intergenic 75.0%
GACGGGCCTGCGTGCAGCAC+CGG + Chr8:63318160-63318179 MsG0880045721.01.T01:intron 75.0%
! GCTGCACGCAGGCCCGTCGC+TGG - Chr8:63318158-63318177 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 63315419 63320653 63315419 ID=MsG0880045721.01;Name=MsG0880045721.01
Chr8 mRNA 63315419 63320653 63315419 ID=MsG0880045721.01.T01;Parent=MsG0880045721.01;Name=MsG0880045721.01.T01;_AED=0.38;_eAED=0.38;_QI=259|0.75|1|1|0.75|0.8|5|330|130
Chr8 exon 63315419 63315657 63315419 ID=MsG0880045721.01.T01:exon:13195;Parent=MsG0880045721.01.T01
Chr8 exon 63316681 63316762 63316681 ID=MsG0880045721.01.T01:exon:13196;Parent=MsG0880045721.01.T01
Chr8 exon 63316843 63316955 63316843 ID=MsG0880045721.01.T01:exon:13197;Parent=MsG0880045721.01.T01
Chr8 exon 63319265 63319344 63319265 ID=MsG0880045721.01.T01:exon:13198;Parent=MsG0880045721.01.T01
Chr8 exon 63320186 63320653 63320186 ID=MsG0880045721.01.T01:exon:13199;Parent=MsG0880045721.01.T01
Chr8 five_prime_UTR 63315419 63315657 63315419 ID=MsG0880045721.01.T01:five_prime_utr;Parent=MsG0880045721.01.T01
Chr8 five_prime_UTR 63316681 63316700 63316681 ID=MsG0880045721.01.T01:five_prime_utr;Parent=MsG0880045721.01.T01
Chr8 CDS 63316701 63316762 63316701 ID=MsG0880045721.01.T01:cds;Parent=MsG0880045721.01.T01
Chr8 CDS 63316843 63316955 63316843 ID=MsG0880045721.01.T01:cds;Parent=MsG0880045721.01.T01
Chr8 CDS 63319265 63319344 63319265 ID=MsG0880045721.01.T01:cds;Parent=MsG0880045721.01.T01
Chr8 CDS 63320186 63320323 63320186 ID=MsG0880045721.01.T01:cds;Parent=MsG0880045721.01.T01
Chr8 three_prime_UTR 63320324 63320653 63320324 ID=MsG0880045721.01.T01:three_prime_utr;Parent=MsG0880045721.01.T01
Gene Sequence

>MsG0880045721.01.T01

ATGGGTCTTCTCAGCATCATCGGGAAAATTAAGAAGAAGGAGAAGGAAATGCGAATTATGGTTGGGTTGGACAATTCAGGGAAAACTACAATCGTTTTGAAGATTAACGGGGAGGAGGACACTAGCGTCATCAGTCCTACCTTGGATTCAACATCAAAACCATCACCTACCAGAAAGACTATCTGGAGCATCCTTACTAATTCTAGCAATAAACAAGATATTAAAGGCGCCCTTGCACCAGAAGAAATAGCTAAGGTGTTGAACTTGGAAGCGATGGATAAATCTCGACACTGGATGATAGTTGGCTGTAGTGCGTACACTGGTGAGGGCTTGCTTGAGGGATTTGATTGGTTGGTCCAGGACATAGCCTCTAGAATCTACTTGCTCGACTAA
Protein sequence

>MsG0880045721.01.T01

MGLLSIIGKIKKKEKEMRIMVGLDNSGKTTIVLKINGEEDTSVISPTLDSTSKPSPTRKTIWSILTNSSNKQDIKGALAPEEIAKVLNLEAMDKSRHWMIVGCSAYTGEGLLEGFDWLVQDIASRIYLLD*