AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046581.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046581.01.T01 MTR_4g112830 92.574 202 15 0 96 297 48 249 1.01e-136 387
MsG0880046581.01.T01 MTR_4g112610 93.069 202 14 0 96 297 42 243 1.78e-136 386
MsG0880046581.01.T01 MTR_4g112590 90.123 81 4 1 16 96 115 191 5.51e-47 157
MsG0880046581.01.T01 MTR_4g110120 90.625 64 6 0 234 297 1 64 3.79e-34 119
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046581.01.T01 AT5G35520 38.308 201 110 5 95 290 40 231 2.83e-35 127

Find 79 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTACGCTGAGTTGTTTC+AGG 0.143353 8:-75086591 MsG0880046581.01.T01:CDS
TCAAAAGGTTCAATCTGTTT+TGG 0.255176 8:-75087408 MsG0880046581.01.T01:CDS
AAATATATGTGGAAGAATAA+TGG 0.256660 8:-75089436 MsG0880046581.01.T01:CDS
AAGGATTGACAACAATAAAA+TGG 0.285180 8:-75085880 MsG0880046581.01.T01:CDS
TGCTCTACGCATGGCTGAAT+CGG 0.306142 8:+75091928 None:intergenic
GGATCAAAAGCTCGCTGTTT+GGG 0.327066 8:-75087387 MsG0880046581.01.T01:CDS
TCCGGTCTCTTCAATCTTGT+TGG 0.331304 8:+75085917 None:intergenic
TTAAAGATTGCTGCTGAAAA+AGG 0.341897 8:-75089604 MsG0880046581.01.T01:five_prime_UTR
TTGTGTTCCTGCAGAGATTA+TGG 0.353919 8:-75085982 MsG0880046581.01.T01:intron
TCCTGGTTCTACTTCCAATC+TGG 0.359101 8:-75086874 MsG0880046581.01.T01:CDS
CCTTGAACTCACAATACATT+TGG 0.359356 8:+75089480 None:intergenic
GAACATACATTGAGAGTGTT+TGG 0.361941 8:+75087314 None:intergenic
GATCATACCATACATGTATA+TGG 0.371260 8:+75089570 None:intergenic
AATATATGTGGAAGAATAAT+GGG 0.376281 8:-75089435 MsG0880046581.01.T01:CDS
GTTTGGCAATTGAAAACCTT+CGG 0.391014 8:+75087331 None:intergenic
TGGATCAAAAGCTCGCTGTT+TGG 0.391728 8:-75087388 MsG0880046581.01.T01:CDS
CCCCACCTGTAGTAGGTTGC+TGG 0.403047 8:+75092000 None:intergenic
GAAGGATTGCTTGAATACTT+TGG 0.403729 8:-75089661 MsG0880046581.01.T01:five_prime_UTR
CCAAATGTATTGTGAGTTCA+AGG 0.409539 8:-75089480 MsG0880046581.01.T01:CDS
GTCCTAATGCGAGTAATTGC+GGG 0.422071 8:+75091893 None:intergenic
TTTGGCAATTGAAAACCTTC+GGG 0.426623 8:+75087332 None:intergenic
TATTGTGAGTTCAAGGAGTA+AGG 0.427819 8:-75089473 MsG0880046581.01.T01:CDS
TCAGAACTTCGACTCAAGAT+AGG 0.430690 8:-75085951 MsG0880046581.01.T01:CDS
TGTTGATTGCATTCGTCAAA+AGG 0.440105 8:-75087423 MsG0880046581.01.T01:CDS
AATATTTAACAAAATATATG+TGG 0.460979 8:-75089447 MsG0880046581.01.T01:CDS
AGTAGCTTCCGCATTGAGCT+TGG 0.467482 8:+75087586 None:intergenic
TCTGCTATATATGCTTCTAA+AGG 0.478873 8:-75085852 MsG0880046581.01.T01:intron
TATCCGAATGGAAACATTGA+TGG 0.481751 8:-75089637 MsG0880046581.01.T01:five_prime_UTR
GCTCTACGCATGGCTGAATC+GGG 0.484121 8:+75091929 None:intergenic
CTGAGCATCTAATTCCAGAT+TGG 0.485974 8:+75086860 None:intergenic
ATGAAACCTGTGTGAGATGT+TGG 0.499069 8:+75087555 None:intergenic
TCTTACGCTGAGTTGTTTCA+GGG 0.501163 8:-75086590 MsG0880046581.01.T01:intron
AGACCATCAATGTTTCCATT+CGG 0.502530 8:+75089634 None:intergenic
GGTCCTAATGCGAGTAATTG+CGG 0.505123 8:+75091892 None:intergenic
AGTGGGAATGTCATTGATCC+TGG 0.506246 8:-75086891 MsG0880046581.01.T01:CDS
ACCTTTCTTTGCTCTACGCA+TGG 0.508065 8:+75091919 None:intergenic
CAGTATTGGTTAACTTATGT+AGG 0.509945 8:-75091965 MsG0880046581.01.T01:five_prime_UTR
AGCTTCCGCATTGAGCTTGG+TGG 0.510752 8:+75087589 None:intergenic
ATGGACGTTGTGGAAAATGA+AGG 0.519979 8:-75091866 MsG0880046581.01.T01:five_prime_UTR
AAGGAAGCCATATACATGTA+TGG 0.520813 8:-75089577 MsG0880046581.01.T01:exon
TGACAATGTGTGAAGATTGT+AGG 0.525566 8:-75089297 MsG0880046581.01.T01:intron
GTCCCGCAATTACTCGCATT+AGG 0.530181 8:-75091895 MsG0880046581.01.T01:five_prime_UTR
CAAAGAGCACGTGCGAGGGA+TGG 0.538648 8:-75089378 MsG0880046581.01.T01:CDS
CATGACCAGCAACCTACTAC+AGG 0.539430 8:-75092005 MsG0880046581.01.T01:five_prime_UTR
GGGTTCACCACCAACAGTAT+TGG 0.541639 8:-75091979 MsG0880046581.01.T01:five_prime_UTR
TGAAACCTGTGTGAGATGTT+GGG 0.549233 8:+75087556 None:intergenic
CTTCAAATTTCGTATTAGAG+AGG 0.553512 8:+75085742 None:intergenic
TATCTTGAGTCGAAGTTCTG+AGG 0.553557 8:+75085953 None:intergenic
TCCAGATTGGAAGTAGAACC+AGG 0.560356 8:+75086873 None:intergenic
GTGCTCTTTGAGTTGCATAG+AGG 0.564942 8:+75089391 None:intergenic
GAATACTTTGGCTATCCGAA+TGG 0.566536 8:-75089649 MsG0880046581.01.T01:five_prime_UTR
ATGCTCAGTTAGAATCATTG+AGG 0.569791 8:-75086845 MsG0880046581.01.T01:CDS
TTCTTTCAGGGTGAAACAAG+TGG 0.571772 8:-75086909 MsG0880046581.01.T01:intron
AAGTTAACCAATACTGTTGG+TGG 0.575733 8:+75091972 None:intergenic
GTTAACTTATGTAGGCTCAA+AGG 0.579527 8:-75091957 MsG0880046581.01.T01:five_prime_UTR
ACCAACAAGATTGAAGAGAC+CGG 0.579940 8:-75085918 MsG0880046581.01.T01:CDS
GTCAGTCTTCTCACAATGCT+CGG 0.580367 8:-75086649 MsG0880046581.01.T01:CDS
TGGACGTTGTGGAAAATGAA+GGG 0.581174 8:-75091865 MsG0880046581.01.T01:five_prime_UTR
GACCAGCAACCTACTACAGG+TGG 0.588792 8:-75092002 MsG0880046581.01.T01:five_prime_UTR
CCAGCAACCTACTACAGGTG+GGG 0.591706 8:-75092000 MsG0880046581.01.T01:five_prime_UTR
ACCAGCAACCTACTACAGGT+GGG 0.595867 8:-75092001 MsG0880046581.01.T01:five_prime_UTR
TTGAGCATATGCGTTTCTTG+AGG 0.597513 8:-75089507 MsG0880046581.01.T01:CDS
AACTCAAAGAGCACGTGCGA+GGG 0.600891 8:-75089382 MsG0880046581.01.T01:CDS
GAGGGATGGAGAGTGAAGAA+AGG 0.602451 8:-75089364 MsG0880046581.01.T01:CDS
TCTTTCAGGGTGAAACAAGT+GGG 0.606547 8:-75086908 MsG0880046581.01.T01:intron
CAGCAACCTACTACAGGTGG+GGG 0.615351 8:-75091999 MsG0880046581.01.T01:five_prime_UTR
GCCATGCGTAGAGCAAAGAA+AGG 0.616743 8:-75091920 MsG0880046581.01.T01:five_prime_UTR
AACTTATGTAGGCTCAAAGG+TGG 0.618744 8:-75091954 MsG0880046581.01.T01:five_prime_UTR
TAGGACCGAGATGGACGTTG+TGG 0.619822 8:-75091876 MsG0880046581.01.T01:five_prime_UTR
TACTCGCATTAGGACCGAGA+TGG 0.620285 8:-75091885 MsG0880046581.01.T01:five_prime_UTR
GGAGAGTGAAGAAAGGTCCA+TGG 0.622133 8:-75089357 MsG0880046581.01.T01:CDS
CAACTCAAAGAGCACGTGCG+AGG 0.626864 8:-75089383 MsG0880046581.01.T01:CDS
CATAAGTTAACCAATACTGT+TGG 0.628924 8:+75091969 None:intergenic
CTTGAGTCGAAGTTCTGAGG+CGG 0.647508 8:+75085956 None:intergenic
AATCACGAGTCAAGAAAACA+AGG 0.659641 8:-75089532 MsG0880046581.01.T01:CDS
GAAAATGAAGGGAGAAAATG+CGG 0.666179 8:-75091854 MsG0880046581.01.T01:five_prime_UTR
AAGATCCCAACATCTCACAC+AGG 0.719465 8:-75087561 MsG0880046581.01.T01:intron
AGCATCCACCAAGCTCAATG+CGG 0.721723 8:-75087594 MsG0880046581.01.T01:CDS
CAATGCTCGGTATATCAACG+AGG 0.745621 8:-75086636 MsG0880046581.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACATTTATAAAATGTA+GGG - Chr8:75086542-75086561 MsG0880046581.01.T01:intron 10.0%
!! AATATTTAACAAAATATATG+TGG - Chr8:75088261-75088280 MsG0880046581.01.T01:intron 10.0%
!! CAATTTAATTAACTTTAATT+AGG - Chr8:75090211-75090230 MsG0880046581.01.T01:intron 10.0%
!! CTATGTAAAAATATAAATAT+TGG + Chr8:75089137-75089156 None:intergenic 10.0%
!! TAAAAACATTTATAAAATGT+AGG - Chr8:75086541-75086560 MsG0880046581.01.T01:intron 10.0%
!! TATATATGTATATATAATCA+TGG + Chr8:75088921-75088940 None:intergenic 10.0%
!! TTTATTTAACAAATTCAAAA+AGG - Chr8:75086639-75086658 MsG0880046581.01.T01:CDS 10.0%
!!! AATGAATTATTTTTTTATTG+AGG + Chr8:75088722-75088741 None:intergenic 10.0%
!!! ATAAGTAAATTTTTTTTTGT+AGG + Chr8:75086913-75086932 None:intergenic 10.0%
!!! ATTAAAAAAAAAAACTGTTT+TGG - Chr8:75086757-75086776 MsG0880046581.01.T01:intron 10.0%
!!! GTTTTTTATTTTATTTGTTT+TGG - Chr8:75088580-75088599 MsG0880046581.01.T01:intron 10.0%
!!! TAAATAAATAAGTTTTTATG+AGG + Chr8:75086627-75086646 None:intergenic 10.0%
!!! TAAGTAAATTTTTTTTTGTA+GGG + Chr8:75086912-75086931 None:intergenic 10.0%
!!! TTTTGACAATATAAAATTTA+GGG - Chr8:75086811-75086830 MsG0880046581.01.T01:intron 10.0%
!!! TTTTTGACAATATAAAATTT+AGG - Chr8:75086810-75086829 MsG0880046581.01.T01:intron 10.0%
!! AAAAAAAATAAACATAGGAT+AGG - Chr8:75089785-75089804 MsG0880046581.01.T01:intron 15.0%
!! AAATTATCCTTATTAACTAT+TGG + Chr8:75089429-75089448 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG - Chr8:75087220-75087239 MsG0880046581.01.T01:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG - Chr8:75089428-75089447 MsG0880046581.01.T01:CDS 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - Chr8:75087292-75087311 MsG0880046581.01.T01:intron 15.0%
!! AGATATAAGTAACAAAAATA+TGG - Chr8:75087103-75087122 MsG0880046581.01.T01:intron 15.0%
!! ATTTCTTGAAATTTATGTTA+TGG - Chr8:75088782-75088801 MsG0880046581.01.T01:intron 15.0%
!! CCAAAAAAAAAAATAAACAT+AGG - Chr8:75089780-75089799 MsG0880046581.01.T01:intron 15.0%
!! CTCATAAAAAAATTGATATT+TGG - Chr8:75086683-75086702 MsG0880046581.01.T01:CDS 15.0%
!! CTTAAGAAAAAATTATACAA+CGG + Chr8:75090769-75090788 None:intergenic 15.0%
!! TTAAAAATGTATATATGATG+TGG - Chr8:75090655-75090674 MsG0880046581.01.T01:intron 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG + Chr8:75086945-75086964 None:intergenic 15.0%
!!! ATATTGTTTTTTTAATTGGT+TGG + Chr8:75089178-75089197 None:intergenic 15.0%
!!! ATTACTAAATTGATAATAAG+TGG + Chr8:75089653-75089672 None:intergenic 15.0%
!!! ATTGAATTTTTTTAATTGGT+TGG + Chr8:75089234-75089253 None:intergenic 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + Chr8:75089302-75089321 None:intergenic 15.0%
!!! CCTATGTTTATTTTTTTTTT+TGG + Chr8:75089783-75089802 None:intergenic 15.0%
!!! GAAATTATTTTAGAGTTTTT+AGG + Chr8:75089586-75089605 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG + Chr8:75086946-75086965 None:intergenic 15.0%
!!! TAGAACAATAAATGATATTT+TGG + Chr8:75091885-75091904 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + Chr8:75089405-75089424 None:intergenic 15.0%
!!! TATATTTTACTAGCAAATAA+TGG - Chr8:75091385-75091404 MsG0880046581.01.T01:intron 15.0%
!!! TCATATTAATGCAATTTTTT+CGG + Chr8:75085904-75085923 None:intergenic 15.0%
!!! TTTTTATGAGGTTTTTTTTT+GGG + Chr8:75086615-75086634 None:intergenic 15.0%
!! AAAATAAATATGTCTCAAGT+TGG - Chr8:75086143-75086162 MsG0880046581.01.T01:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - Chr8:75089419-75089438 MsG0880046581.01.T01:CDS 20.0%
!! AAATATATGTGGAAGAATAA+TGG - Chr8:75088272-75088291 MsG0880046581.01.T01:intron 20.0%
!! AACATTGAATTATTTGGATA+TGG - Chr8:75091307-75091326 MsG0880046581.01.T01:intron 20.0%
!! AATATATGTGGAAGAATAAT+GGG - Chr8:75088273-75088292 MsG0880046581.01.T01:intron 20.0%
!! AATGATTATAAGAAAGAGAA+TGG + Chr8:75089462-75089481 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + Chr8:75089342-75089361 None:intergenic 20.0%
!! ATAGAATTAGAAATAGTCTT+TGG + Chr8:75089828-75089847 None:intergenic 20.0%
!! ATTAGTATGACACATTTAAA+AGG + Chr8:75086011-75086030 None:intergenic 20.0%
!! CAAAAGAACATTGAATTATT+TGG - Chr8:75091301-75091320 MsG0880046581.01.T01:intron 20.0%
!! CAAATATTGTGAGAATAAAA+CGG + Chr8:75088967-75088986 None:intergenic 20.0%
!! CCTTTAATCTCTTTAAATAA+AGG + Chr8:75090534-75090553 None:intergenic 20.0%
!! TAAGCAATTTCTTTGAATAA+TGG + Chr8:75090188-75090207 None:intergenic 20.0%
!! TAATCTCTTTAAATAAAGGT+AGG + Chr8:75090530-75090549 None:intergenic 20.0%
!! TATAAAACACAATCAAAAGA+CGG + Chr8:75091425-75091444 None:intergenic 20.0%
!! TTTCTAATTCTATCATTGTA+CGG - Chr8:75089835-75089854 MsG0880046581.01.T01:intron 20.0%
!!! AAACTCTAAAATAATTTCCT+TGG - Chr8:75089588-75089607 MsG0880046581.01.T01:five_prime_UTR 20.0%
!!! AAATTAAATCTTGTTGTTTC+AGG - Chr8:75090089-75090108 MsG0880046581.01.T01:intron 20.0%
!!! AATTAAATCTTGTTGTTTCA+GGG - Chr8:75090090-75090109 MsG0880046581.01.T01:intron 20.0%
!!! ATTTAGGGTTAAATATGTTT+TGG - Chr8:75086826-75086845 MsG0880046581.01.T01:intron 20.0%
!!! CAAATTTTGCGATATTTTTT+CGG - Chr8:75087136-75087155 MsG0880046581.01.T01:intron 20.0%
!!! CATATTAATGCAATTTTTTC+GGG + Chr8:75085903-75085922 None:intergenic 20.0%
!!! CCTTTATTTAAAGAGATTAA+AGG - Chr8:75090531-75090550 MsG0880046581.01.T01:intron 20.0%
!!! CTTTTCATAAAATAAGAAGA+CGG + Chr8:75089738-75089757 None:intergenic 20.0%
!!! GACATTGATTTGATTATATA+GGG + Chr8:75087599-75087618 None:intergenic 20.0%
!!! GTTTTTATGAGGTTTTTTTT+TGG + Chr8:75086616-75086635 None:intergenic 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG + Chr8:75087190-75087209 None:intergenic 20.0%
!!! TATTTTATTTGTTTTGGGAA+GGG - Chr8:75088586-75088605 MsG0880046581.01.T01:intron 20.0%
!!! TCAGTACATTTTTACATTTA+TGG - Chr8:75091703-75091722 MsG0880046581.01.T01:intron 20.0%
!!! TGATTTTTAGTTTGAGTTTA+GGG - Chr8:75086366-75086385 MsG0880046581.01.T01:intron 20.0%
!!! TTATTTTATTTGTTTTGGGA+AGG - Chr8:75088585-75088604 MsG0880046581.01.T01:intron 20.0%
!!! TTGATTTTTAGTTTGAGTTT+AGG - Chr8:75086365-75086384 MsG0880046581.01.T01:intron 20.0%
!!! TTTAGGGTTAATTATGTTTT+TGG + Chr8:75087350-75087369 None:intergenic 20.0%
!!! TTTTGGGTTAAATATGTTTT+TGG + Chr8:75086599-75086618 None:intergenic 20.0%
! AAAAATTATACAACGGAACA+AGG + Chr8:75090762-75090781 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG - Chr8:75087231-75087250 MsG0880046581.01.T01:intron 25.0%
! AAATAATGTCAACAATTTCC+CGG - Chr8:75091584-75091603 MsG0880046581.01.T01:intron 25.0%
! AAATGTTCAATTCAGAACTA+TGG + Chr8:75091935-75091954 None:intergenic 25.0%
! AAGGATTGACAACAATAAAA+TGG - Chr8:75091828-75091847 MsG0880046581.01.T01:intron 25.0%
! AAGTAAAGACTAAACTTAGA+AGG + Chr8:75086869-75086888 None:intergenic 25.0%
! AATTGTATTGTTTGATGTCT+TGG + Chr8:75090609-75090628 None:intergenic 25.0%
! ACATTTATTGCATGATGAAA+AGG - Chr8:75087532-75087551 MsG0880046581.01.T01:intron 25.0%
! ACGGAAATAATATTTAGAGA+AGG - Chr8:75088029-75088048 MsG0880046581.01.T01:intron 25.0%
! CTTAATACATACAAACAAAC+AGG + Chr8:75091238-75091257 None:intergenic 25.0%
! GAAGAGAAAAACAATGATAA+AGG + Chr8:75090357-75090376 None:intergenic 25.0%
! GTGTTAAGAACGTTATAAAA+AGG + Chr8:75087166-75087185 None:intergenic 25.0%
! GTTCAAGAAAATTGAGATAT+TGG + Chr8:75087688-75087707 None:intergenic 25.0%
! TAATGTCTTTCGTTTCTATA+TGG - Chr8:75091449-75091468 MsG0880046581.01.T01:intron 25.0%
! TCAAAAAGTCAATCAAATCT+TGG + Chr8:75087507-75087526 None:intergenic 25.0%
! TGTAATATATTTAATGGTGC+AGG - Chr8:75087379-75087398 MsG0880046581.01.T01:CDS 25.0%
! TTATTTAATGTTCACTAGAG+TGG - Chr8:75088464-75088483 MsG0880046581.01.T01:intron 25.0%
! TTGCTTAGAAAGTGAAAATA+CGG - Chr8:75088010-75088029 MsG0880046581.01.T01:intron 25.0%
! TTGTAACACATATCTTTCTT+GGG + Chr8:75087920-75087939 None:intergenic 25.0%
!! AAGGACAATACATTTTTGAA+CGG + Chr8:75085992-75086011 None:intergenic 25.0%
!! CAAGATAAGATTTGTTTGAT+AGG - Chr8:75091478-75091497 MsG0880046581.01.T01:intron 25.0%
!! CAATTTCTTTGAATAATGGA+AGG + Chr8:75090184-75090203 None:intergenic 25.0%
!! CTACATGAATTAATTTTCAC+AGG - Chr8:75091902-75091921 MsG0880046581.01.T01:five_prime_UTR 25.0%
!! CTCTTCAATTTTCTTTTTGA+TGG + Chr8:75087718-75087737 None:intergenic 25.0%
!! GCACATTATATGATTGTTTT+TGG - Chr8:75088990-75089009 MsG0880046581.01.T01:intron 25.0%
!! GTTTCATTTCTCTTTTACTA+AGG + Chr8:75091564-75091583 None:intergenic 25.0%
!! TAAAGTCTTCATTTTGTAGA+TGG - Chr8:75090928-75090947 MsG0880046581.01.T01:intron 25.0%
!! TATAAACAAGAGATTTTGAG+AGG + Chr8:75087659-75087678 None:intergenic 25.0%
!! TATATTACTGACTGTGTAAT+TGG + Chr8:75091349-75091368 None:intergenic 25.0%
!! TTCTAAAAGTATGGTAGATT+TGG - Chr8:75086317-75086336 MsG0880046581.01.T01:intron 25.0%
!! TTGTTGTTATTCGCTAATTA+TGG - Chr8:75090426-75090445 MsG0880046581.01.T01:intron 25.0%
!! TTTGAAGTATTTGAGTATGT+TGG - Chr8:75088637-75088656 MsG0880046581.01.T01:intron 25.0%
!!! AAAATAATGAGTATTGAACC+AGG - Chr8:75088834-75088853 MsG0880046581.01.T01:intron 25.0%
!!! AGGCATTTTTTTATTGCATT+TGG - Chr8:75085940-75085959 MsG0880046581.01.T01:CDS 25.0%
!!! AGGTTTTAGAAAAGAGATTA+AGG + Chr8:75090742-75090761 None:intergenic 25.0%
!!! ATATTTTTTCTTCTGTGTGA+GGG + Chr8:75087571-75087590 None:intergenic 25.0%
!!! ATTTTGAGAGGTTTTTCTTT+TGG + Chr8:75087647-75087666 None:intergenic 25.0%
!!! GAGTGCAAAATTTTTTTGTA+GGG - Chr8:75087263-75087282 MsG0880046581.01.T01:intron 25.0%
!!! GATTATTTGTTTCTGTGAAA+GGG - Chr8:75090262-75090281 MsG0880046581.01.T01:intron 25.0%
!!! GGACATTGATTTGATTATAT+AGG + Chr8:75087600-75087619 None:intergenic 25.0%
!!! GTTTCTCATTTGATTTTTCT+TGG - Chr8:75090970-75090989 MsG0880046581.01.T01:intron 25.0%
!!! TATATTTTTTCTTCTGTGTG+AGG + Chr8:75087572-75087591 None:intergenic 25.0%
!!! TGAGTGCAAAATTTTTTTGT+AGG - Chr8:75087262-75087281 MsG0880046581.01.T01:intron 25.0%
!!! TGATTATTTGTTTCTGTGAA+AGG - Chr8:75090261-75090280 MsG0880046581.01.T01:intron 25.0%
!!! TTGGAATTTTCTTTTCAAGT+AGG - Chr8:75086336-75086355 MsG0880046581.01.T01:intron 25.0%
!!! TTTTGAGAGGTTTTTCTTTT+GGG + Chr8:75087646-75087665 None:intergenic 25.0%
AAAGTCACTAAGAGATTTAG+CGG + Chr8:75087857-75087876 None:intergenic 30.0%
AACAATGCATCAACACAATA+AGG + Chr8:75088563-75088582 None:intergenic 30.0%
AAGAGATTAAAGGAAATGCA+CGG - Chr8:75090541-75090560 MsG0880046581.01.T01:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG - Chr8:75087307-75087326 MsG0880046581.01.T01:intron 30.0%
AGATCGATTAGCAAATCTTT+GGG + Chr8:75087820-75087839 None:intergenic 30.0%
ATCAAAATCGTGCAAAATGT+AGG - Chr8:75086571-75086590 MsG0880046581.01.T01:intron 30.0%
ATGAACATCAGTAGCAATTT+AGG - Chr8:75085920-75085939 MsG0880046581.01.T01:CDS 30.0%
ATTAGCGAATAACAACAAGT+TGG + Chr8:75090424-75090443 None:intergenic 30.0%
ATTGAGGAAAAAACTAGTTG+AGG - Chr8:75090879-75090898 MsG0880046581.01.T01:intron 30.0%
CAAACAAACAGGTATCAAAA+TGG + Chr8:75091227-75091246 None:intergenic 30.0%
CATAAGTTAACCAATACTGT+TGG + Chr8:75085742-75085761 None:intergenic 30.0%
CATCAAAATCTATGCTATTG+CGG - Chr8:75090489-75090508 MsG0880046581.01.T01:intron 30.0%
CTTCAAATTTCGTATTAGAG+AGG + Chr8:75091969-75091988 None:intergenic 30.0%
CTTGGTTTCCTAAAAAATAG+CGG + Chr8:75087489-75087508 None:intergenic 30.0%
GATCATACCATACATGTATA+TGG + Chr8:75088141-75088160 None:intergenic 30.0%
GTTGTAACACATATCTTTCT+TGG + Chr8:75087921-75087940 None:intergenic 30.0%
TAATTCTATCATTGTACGGT+TGG - Chr8:75089839-75089858 MsG0880046581.01.T01:intron 30.0%
TCAAAATCGTGCAAAATGTA+GGG - Chr8:75086572-75086591 MsG0880046581.01.T01:intron 30.0%
TCATAAAATAAGAAGACGGT+AGG + Chr8:75089734-75089753 None:intergenic 30.0%
TCTGCTATATATGCTTCTAA+AGG - Chr8:75091856-75091875 MsG0880046581.01.T01:five_prime_UTR 30.0%
TGATAGGAGGACTATATTTA+GGG - Chr8:75091494-75091513 MsG0880046581.01.T01:intron 30.0%
TGCCACATAAGACAAAAAAT+GGG - Chr8:75086434-75086453 MsG0880046581.01.T01:intron 30.0%
TTAAAGATTGCTGCTGAAAA+AGG - Chr8:75088104-75088123 MsG0880046581.01.T01:intron 30.0%
TTGATAGGAGGACTATATTT+AGG - Chr8:75091493-75091512 MsG0880046581.01.T01:intron 30.0%
! AAACTTTGAGAGAATGTGTA+TGG - Chr8:75086200-75086219 MsG0880046581.01.T01:intron 30.0%
! AAGAAAGTGTACTTTCTTTC+AGG - Chr8:75090786-75090805 MsG0880046581.01.T01:intron 30.0%
! AGAAAGTGTACTTTCTTTCA+GGG - Chr8:75090787-75090806 MsG0880046581.01.T01:intron 30.0%
! ATCTCAATTTTCTTGAACCA+TGG - Chr8:75087690-75087709 MsG0880046581.01.T01:intron 30.0%
! CAAGTTTAGAACACTATGAA+AGG - Chr8:75087008-75087027 MsG0880046581.01.T01:intron 30.0%
! GATAAGATTTGTTTGATAGG+AGG - Chr8:75091481-75091500 MsG0880046581.01.T01:intron 30.0%
! TCAAAAGGTTCAATCTGTTT+TGG - Chr8:75090300-75090319 MsG0880046581.01.T01:intron 30.0%
! TGGTCAACTTTCTAAAAGTA+TGG - Chr8:75086308-75086327 MsG0880046581.01.T01:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG + Chr8:75089530-75089511 None:intergenic 30.0%
!! AGTTCTGAATTGAACATTTC+TGG - Chr8:75091936-75091955 MsG0880046581.01.T01:five_prime_UTR 30.0%
!! AGTTTTTAGGAGCTTAGAAA+AGG + Chr8:75089573-75089592 None:intergenic 30.0%
!! CAGTATTGGTTAACTTATGT+AGG - Chr8:75085743-75085762 MsG0880046581.01.T01:CDS 30.0%
!! CCTTTTTGCTTTCATTTTTC+CGG + Chr8:75091812-75091831 None:intergenic 30.0%
!! CTAGCAAATAATGGACATTT+AGG - Chr8:75091394-75091413 MsG0880046581.01.T01:intron 30.0%
!! GATAGACAGAGTTTTAATGA+AGG - Chr8:75089035-75089054 MsG0880046581.01.T01:intron 30.0%
!! TTTTCTTGACTCGTGATTTT+CGG + Chr8:75088174-75088193 None:intergenic 30.0%
!!! ATGTTTTGGTCCCTATAAAA+TGG - Chr8:75086840-75086859 MsG0880046581.01.T01:CDS 30.0%
!!! ATTTTGCGATATTTTTTCGG+AGG - Chr8:75087139-75087158 MsG0880046581.01.T01:intron 30.0%
!!! GTTGGTTTTAGTGTATCTTT+TGG - Chr8:75088655-75088674 MsG0880046581.01.T01:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + Chr8:75089296-75089277 None:intergenic 30.0%
AAAGAAGAAGAAGAAGCGAA+AGG + Chr8:75090040-75090059 None:intergenic 35.0%
AAAGACGATACGTTCTCATT+CGG + Chr8:75087981-75088000 None:intergenic 35.0%
AACGTTGATGTAACAATGAG+TGG + Chr8:75086462-75086481 None:intergenic 35.0%
AAGAAGAAGAAGAAGCGAAA+GGG + Chr8:75090039-75090058 None:intergenic 35.0%
AAGGAAGCCATATACATGTA+TGG - Chr8:75088131-75088150 MsG0880046581.01.T01:intron 35.0%
AAGTAGGACTTGAGACATAT+GGG - Chr8:75086226-75086245 MsG0880046581.01.T01:intron 35.0%
AAGTTAACCAATACTGTTGG+TGG + Chr8:75085739-75085758 None:intergenic 35.0%
AATCACGAGTCAAGAAAACA+AGG - Chr8:75088176-75088195 MsG0880046581.01.T01:intron 35.0%
AATGTGTGAAGATTGTAGGT+GGG - Chr8:75088415-75088434 MsG0880046581.01.T01:intron 35.0%
ACGTTGATGTAACAATGAGT+GGG + Chr8:75086461-75086480 None:intergenic 35.0%
AGACCATCAATGTTTCCATT+CGG + Chr8:75088077-75088096 None:intergenic 35.0%
ATAGGAGGACTATATTTAGG+GGG - Chr8:75091496-75091515 MsG0880046581.01.T01:intron 35.0%
ATAGGATAGGAGATTTGCAA+AGG - Chr8:75089798-75089817 MsG0880046581.01.T01:intron 35.0%
ATGATCTAAACAATGCTTCC+TGG + Chr8:75088855-75088874 None:intergenic 35.0%
ATGCATCAACACAATAAGGT+AGG + Chr8:75088559-75088578 None:intergenic 35.0%
ATGCTCAGTTAGAATCATTG+AGG - Chr8:75090863-75090882 MsG0880046581.01.T01:intron 35.0%
CAAGTAGGCAAGAATGTATT+TGG - Chr8:75091622-75091641 MsG0880046581.01.T01:intron 35.0%
CAATATAGGTATCATAGGTC+AGG - Chr8:75091522-75091541 MsG0880046581.01.T01:intron 35.0%
CAGATCGATTAGCAAATCTT+TGG + Chr8:75087821-75087840 None:intergenic 35.0%
CCAAATGTATTGTGAGTTCA+AGG - Chr8:75088228-75088247 MsG0880046581.01.T01:intron 35.0%
CCGGAAAAATGAAAGCAAAA+AGG - Chr8:75091809-75091828 MsG0880046581.01.T01:intron 35.0%
CCTTGAACTCACAATACATT+TGG + Chr8:75088231-75088250 None:intergenic 35.0%
CTGACCTATGATACCTATAT+TGG + Chr8:75091524-75091543 None:intergenic 35.0%
CTGCCACATAAGACAAAAAA+TGG - Chr8:75086433-75086452 MsG0880046581.01.T01:intron 35.0%
GAAAATGAAGGGAGAAAATG+CGG - Chr8:75085854-75085873 MsG0880046581.01.T01:CDS 35.0%
GAAATTTCGGGAATCGAATT+TGG - Chr8:75089865-75089884 MsG0880046581.01.T01:intron 35.0%
GAAGGATTGCTTGAATACTT+TGG - Chr8:75088047-75088066 MsG0880046581.01.T01:intron 35.0%
GACAATTTCCATTGATCCAA+TGG - Chr8:75087952-75087971 MsG0880046581.01.T01:intron 35.0%
GATAGGAGGACTATATTTAG+GGG - Chr8:75091495-75091514 MsG0880046581.01.T01:intron 35.0%
GTTAACTTATGTAGGCTCAA+AGG - Chr8:75085751-75085770 MsG0880046581.01.T01:intron 35.0%
GTTTGGCAATTGAAAACCTT+CGG + Chr8:75090380-75090399 None:intergenic 35.0%
TAGTTGAGGTAATAAGAGTG+TGG - Chr8:75090893-75090912 MsG0880046581.01.T01:intron 35.0%
TATCCGAATGGAAACATTGA+TGG - Chr8:75088071-75088090 MsG0880046581.01.T01:intron 35.0%
TATTGTGAGTTCAAGGAGTA+AGG - Chr8:75088235-75088254 MsG0880046581.01.T01:intron 35.0%
TCATCTTCCAGTAAAAACCA+TGG + Chr8:75088371-75088390 None:intergenic 35.0%
TGACAATGTGTGAAGATTGT+AGG - Chr8:75088411-75088430 MsG0880046581.01.T01:intron 35.0%
TGTTAATGAAATAGACGACG+AGG - Chr8:75086483-75086502 MsG0880046581.01.T01:intron 35.0%
TTAATGTTCACTAGAGTGGT+TGG - Chr8:75088468-75088487 MsG0880046581.01.T01:intron 35.0%
TTCGCTAATTATGGTCAATG+TGG - Chr8:75090435-75090454 MsG0880046581.01.T01:intron 35.0%
TTTAGGAGCTTAGAAAAGGA+CGG + Chr8:75089569-75089588 None:intergenic 35.0%
TTTGGCAATTGAAAACCTTC+GGG + Chr8:75090379-75090398 None:intergenic 35.0%
! CAAGTTGGAATTGAGACATA+GGG - Chr8:75086257-75086276 MsG0880046581.01.T01:intron 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + Chr8:75089380-75089399 None:intergenic 35.0%
! TACAAGGTCGCAATTTTGTA+GGG - Chr8:75087323-75087342 MsG0880046581.01.T01:CDS 35.0%
! TGTGCAGAGTATTAATTGGA+TGG + Chr8:75089376-75089395 None:intergenic 35.0%
! TGTTGATTGCATTCGTCAAA+AGG - Chr8:75090285-75090304 MsG0880046581.01.T01:intron 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - Chr8:75087322-75087341 MsG0880046581.01.T01:CDS 35.0%
!! AATTGAACATTTCTGGTTGC+AGG - Chr8:75091943-75091962 MsG0880046581.01.T01:five_prime_UTR 35.0%
!! AGTAGAAATCGAAAGTATCG+AGG + Chr8:75090003-75090022 None:intergenic 35.0%
!! GAACATACATTGAGAGTGTT+TGG + Chr8:75090397-75090416 None:intergenic 35.0%
!! GGTTTTAGTGTATCTTTTGG+TGG - Chr8:75088658-75088677 MsG0880046581.01.T01:intron 35.0%
!! TAGAAGGTCGCCATTTTATA+GGG + Chr8:75086853-75086872 None:intergenic 35.0%
!! TCAAGTTGGAATTGAGACAT+AGG - Chr8:75086256-75086275 MsG0880046581.01.T01:intron 35.0%
!! TTAACCACTTGCTATCAACT+CGG - Chr8:75089614-75089633 MsG0880046581.01.T01:five_prime_UTR 35.0%
!! TTAGAAGGTCGCCATTTTAT+AGG + Chr8:75086854-75086873 None:intergenic 35.0%
!! TTTTGGGAAGGGAACTATTT+TGG - Chr8:75088597-75088616 MsG0880046581.01.T01:intron 35.0%
!!! GACACTCATTTTGAAACAGA+GGG - Chr8:75089515-75089534 MsG0880046581.01.T01:CDS 35.0%
!!! GACCCATTTTTTGTCTTATG+TGG + Chr8:75086439-75086458 None:intergenic 35.0%
!!! TTCACTCTCCGCTATTTTTT+AGG - Chr8:75087478-75087497 MsG0880046581.01.T01:intron 35.0%
!!! TTTTCTTTTTGATGGTGCCA+TGG + Chr8:75087710-75087729 None:intergenic 35.0%
AACTTATGTAGGCTCAAAGG+TGG - Chr8:75085754-75085773 MsG0880046581.01.T01:intron 40.0%
AAGTTGGACTTGAGACATAG+TGG - Chr8:75086288-75086307 MsG0880046581.01.T01:intron 40.0%
ACATAGGGTATGTCTCAAGT+TGG - Chr8:75086272-75086291 MsG0880046581.01.T01:intron 40.0%
ACATGCACCATCTTCTTTAG+AGG - Chr8:75087780-75087799 MsG0880046581.01.T01:intron 40.0%
ACCAACAAGATTGAAGAGAC+CGG - Chr8:75091790-75091809 MsG0880046581.01.T01:intron 40.0%
ACTTCGTTGAAGAAGAGTTG+TGG + Chr8:75089956-75089975 None:intergenic 40.0%
AGAAGAAGAAGAAGCGAAAG+GGG + Chr8:75090038-75090057 None:intergenic 40.0%
AGCTCTGCATTATTGCAAGT+AGG - Chr8:75091607-75091626 MsG0880046581.01.T01:intron 40.0%
AGTAGGACTTGAGACATATG+GGG - Chr8:75086227-75086246 MsG0880046581.01.T01:intron 40.0%
ATATGGGGTATGTCTCAAGT+TGG - Chr8:75086242-75086261 MsG0880046581.01.T01:intron 40.0%
ATGAAACCTGTGTGAGATGT+TGG + Chr8:75090156-75090175 None:intergenic 40.0%
ATGGACGTTGTGGAAAATGA+AGG - Chr8:75085842-75085861 MsG0880046581.01.T01:intron 40.0%
ATGTCTTGGCAAGTTGTGAT+TGG + Chr8:75090595-75090614 None:intergenic 40.0%
ATTTCGGGAATCGAATTTGG+CGG - Chr8:75089868-75089887 MsG0880046581.01.T01:intron 40.0%
CAAGTAGGACTTGAGACATA+TGG - Chr8:75086225-75086244 MsG0880046581.01.T01:intron 40.0%
CAATGTGTGAAGATTGTAGG+TGG - Chr8:75088414-75088433 MsG0880046581.01.T01:intron 40.0%
CTGAGCATCTAATTCCAGAT+TGG + Chr8:75090851-75090870 None:intergenic 40.0%
CTTGGTATAAATGTGCTGTC+AGG - Chr8:75090988-75091007 MsG0880046581.01.T01:intron 40.0%
GAAGACGGTAGGTAACAAAA+TGG + Chr8:75089723-75089742 None:intergenic 40.0%
GAATACTTTGGCTATCCGAA+TGG - Chr8:75088059-75088078 MsG0880046581.01.T01:intron 40.0%
GGCACCAATATAGGTATCAT+AGG - Chr8:75091517-75091536 MsG0880046581.01.T01:intron 40.0%
GTACGGTTGGACTGAAATTT+CGG - Chr8:75089852-75089871 MsG0880046581.01.T01:intron 40.0%
GTATAAATGTGCTGTCAGGT+GGG - Chr8:75090992-75091011 MsG0880046581.01.T01:intron 40.0%
TACGGTTGGACTGAAATTTC+GGG - Chr8:75089853-75089872 MsG0880046581.01.T01:intron 40.0%
TAGCAAGTGGTTAAGTTCCA+AGG + Chr8:75089608-75089627 None:intergenic 40.0%
TATAAATGTGCTGTCAGGTG+GGG - Chr8:75090993-75091012 MsG0880046581.01.T01:intron 40.0%
TATCTTGAGTCGAAGTTCTG+AGG + Chr8:75091758-75091777 None:intergenic 40.0%
TCAGAACTTCGACTCAAGAT+AGG - Chr8:75091757-75091776 MsG0880046581.01.T01:intron 40.0%
TCTTTCAGGGTGAAACAAGT+GGG - Chr8:75090800-75090819 MsG0880046581.01.T01:intron 40.0%
TGAAACCTGTGTGAGATGTT+GGG + Chr8:75090155-75090174 None:intergenic 40.0%
TGGACGTTGTGGAAAATGAA+GGG - Chr8:75085843-75085862 MsG0880046581.01.T01:intron 40.0%
TTCGGAAACCATTGGATCAA+TGG + Chr8:75087963-75087982 None:intergenic 40.0%
TTCTTTCAGGGTGAAACAAG+TGG - Chr8:75090799-75090818 MsG0880046581.01.T01:intron 40.0%
TTGAGCATATGCGTTTCTTG+AGG - Chr8:75088201-75088220 MsG0880046581.01.T01:intron 40.0%
TTGTAGGTGGGATCATGAAT+TGG - Chr8:75088427-75088446 MsG0880046581.01.T01:intron 40.0%
TTGTGTTCCTGCAGAGATTA+TGG - Chr8:75091726-75091745 MsG0880046581.01.T01:intron 40.0%
! AGCAAATCTTTGGGAAGTGA+TGG + Chr8:75087811-75087830 None:intergenic 40.0%
! ATCTTTGGGAAGTGATGGTA+CGG + Chr8:75087806-75087825 None:intergenic 40.0%
! ATTTTCCACAACGTCCATCT+CGG + Chr8:75085840-75085859 None:intergenic 40.0%
! GAAAGGTCCATGGTTTTTAC+TGG - Chr8:75088361-75088380 MsG0880046581.01.T01:intron 40.0%
! TCTTACGCTGAGTTGTTTCA+GGG - Chr8:75091118-75091137 MsG0880046581.01.T01:intron 40.0%
! TGAGAGGTTTTTCTTTTGGG+TGG + Chr8:75087643-75087662 None:intergenic 40.0%
! TTTGGTGGTAGTCTACTACA+GGG - Chr8:75088673-75088692 MsG0880046581.01.T01:intron 40.0%
! TTTTCCTCCGTTACCGAAAT+TGG + Chr8:75086510-75086529 None:intergenic 40.0%
!! AATACCAGTTCTGAGTAGCA+CGG + Chr8:75091199-75091218 None:intergenic 40.0%
!! CATTGTTTTTCTCTTCCCGA+AGG - Chr8:75090361-75090380 MsG0880046581.01.T01:intron 40.0%
!! CGGTAACGGAGGAAAATATA+GGG - Chr8:75086514-75086533 MsG0880046581.01.T01:intron 40.0%
!! TATTTAGGGGGCACCAATAT+AGG - Chr8:75091508-75091527 MsG0880046581.01.T01:intron 40.0%
!! TCGGTAACGGAGGAAAATAT+AGG - Chr8:75086513-75086532 MsG0880046581.01.T01:intron 40.0%
!! TTTTGGTGGTAGTCTACTAC+AGG - Chr8:75088672-75088691 MsG0880046581.01.T01:intron 40.0%
!!! CGACACTCATTTTGAAACAG+AGG - Chr8:75089514-75089533 MsG0880046581.01.T01:CDS 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr8:75089272-75089291 None:intergenic 40.0%
!!! GCAATTTTTTCGGGAATGAC+CGG + Chr8:75085894-75085913 None:intergenic 40.0%
!!! GGGAACTATTTTGGTGTGTT+TGG - Chr8:75088606-75088625 MsG0880046581.01.T01:intron 40.0%
AAAGGTAGGCGACCACAATA+TGG + Chr8:75090516-75090535 None:intergenic 45.0%
AAGATCCCAACATCTCACAC+AGG - Chr8:75090147-75090166 MsG0880046581.01.T01:intron 45.0%
AAGGTAGGCGACCACAATAT+GGG + Chr8:75090515-75090534 None:intergenic 45.0%
ACCTTTCTTTGCTCTACGCA+TGG + Chr8:75085792-75085811 None:intergenic 45.0%
ACGAGGACCAATTTCGGTAA+CGG - Chr8:75086500-75086519 MsG0880046581.01.T01:intron 45.0%
AGAATGTGTATGGCGCAAGT+AGG - Chr8:75086210-75086229 MsG0880046581.01.T01:intron 45.0%
AGTGGGAATGTCATTGATCC+TGG - Chr8:75090817-75090836 MsG0880046581.01.T01:intron 45.0%
CAATGCTCGGTATATCAACG+AGG - Chr8:75091072-75091091 MsG0880046581.01.T01:intron 45.0%
CGTTCTCATTCGGAAACCAT+TGG + Chr8:75087971-75087990 None:intergenic 45.0%
CTTGCAATAATGCAGAGCTC+CGG + Chr8:75091606-75091625 None:intergenic 45.0%
GGATCAAAAGCTCGCTGTTT+GGG - Chr8:75090321-75090340 MsG0880046581.01.T01:intron 45.0%
GGTATAAATGTGCTGTCAGG+TGG - Chr8:75090991-75091010 MsG0880046581.01.T01:intron 45.0%
GGTCCTAATGCGAGTAATTG+CGG + Chr8:75085819-75085838 None:intergenic 45.0%
GTCAGTCTTCTCACAATGCT+CGG - Chr8:75091059-75091078 MsG0880046581.01.T01:intron 45.0%
GTCCTAATGCGAGTAATTGC+GGG + Chr8:75085818-75085837 None:intergenic 45.0%
TAGACGACGAGGACCAATTT+CGG - Chr8:75086494-75086513 MsG0880046581.01.T01:intron 45.0%
TCCAGATTGGAAGTAGAACC+AGG + Chr8:75090838-75090857 None:intergenic 45.0%
TCCGGTCTCTTCAATCTTGT+TGG + Chr8:75091794-75091813 None:intergenic 45.0%
TGATGTCTCTGTGACTGCAA+TGG + Chr8:75090474-75090493 None:intergenic 45.0%
TGCGGCATTTGTAAGATGAC+CGG - Chr8:75085872-75085891 MsG0880046581.01.T01:CDS 45.0%
TGCTGCTGAAAAAGGTCACA+AGG - Chr8:75088112-75088131 MsG0880046581.01.T01:intron 45.0%
TGGATCAAAAGCTCGCTGTT+TGG - Chr8:75090320-75090339 MsG0880046581.01.T01:intron 45.0%
TTGCAATAATGCAGAGCTCC+GGG + Chr8:75091605-75091624 None:intergenic 45.0%
TTTCGGGAATCGAATTTGGC+GGG - Chr8:75089869-75089888 MsG0880046581.01.T01:intron 45.0%
! CTCTTACGCTGAGTTGTTTC+AGG - Chr8:75091117-75091136 MsG0880046581.01.T01:intron 45.0%
! CTGTCTCGTTGTTGCTTATG+TGG - Chr8:75088510-75088529 MsG0880046581.01.T01:intron 45.0%
! GGTAGTCTACTACAGGGTTT+TGG - Chr8:75088679-75088698 MsG0880046581.01.T01:intron 45.0%
!! AAGCGAAAGGGGTTAGTTAC+TGG + Chr8:75090027-75090046 None:intergenic 45.0%
!! ACTGCAATGGACTGTGATTG+AGG + Chr8:75090461-75090480 None:intergenic 45.0%
!! ATACCAGTTCTGAGTAGCAC+GGG + Chr8:75091198-75091217 None:intergenic 45.0%
!! GGTTTTTCTTTTGGGTGGTG+TGG + Chr8:75087638-75087657 None:intergenic 45.0%
!! GTGCTCTTTGAGTTGCATAG+AGG + Chr8:75088320-75088339 None:intergenic 45.0%
!! TCCTGGTTCTACTTCCAATC+TGG - Chr8:75090834-75090853 MsG0880046581.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr8:75089273-75089292 None:intergenic 45.0%
!! AATTTAATTAACTTTAATTA+GGG - Chr8:75090212-75090231 MsG0880046581.01.T01:intron 5.0%
!! TATATATGTAATATATTTAA+TGG - Chr8:75087373-75087392 MsG0880046581.01.T01:CDS 5.0%
!!! AGTTTTTTTTTTTAATAATA+TGG + Chr8:75086753-75086772 None:intergenic 5.0%
!!! ATAAATATTGTTTTTTTAAT+TGG + Chr8:75089182-75089201 None:intergenic 5.0%
!!! ATATTACATATATAAATTTT+AGG + Chr8:75087367-75087386 None:intergenic 5.0%
!!! ATTCTTTAAAAAAAATAAAA+AGG - Chr8:75087429-75087448 MsG0880046581.01.T01:intron 5.0%
!!! ATTTATGATTAATTTTTTTA+GGG + Chr8:75086050-75086069 None:intergenic 5.0%
!!! TATTACATATATAAATTTTA+GGG + Chr8:75087366-75087385 None:intergenic 5.0%
!!! TATTTATGATTAATTTTTTT+AGG + Chr8:75086051-75086070 None:intergenic 5.0%
!!! TTTAATTGAATTTTTTTAAT+TGG + Chr8:75089238-75089257 None:intergenic 5.0%
!!! TTTTTTATTTTATTTGTTTT+GGG - Chr8:75088581-75088600 MsG0880046581.01.T01:intron 5.0%
ACCAGCAACCTACTACAGGT+GGG - Chr8:75085707-75085726 MsG0880046581.01.T01:CDS 50.0%
AGCATCCACCAAGCTCAATG+CGG - Chr8:75090114-75090133 MsG0880046581.01.T01:intron 50.0%
AGTAGCTTCCGCATTGAGCT+TGG + Chr8:75090125-75090144 None:intergenic 50.0%
GAGGGATGGAGAGTGAAGAA+AGG - Chr8:75088344-75088363 MsG0880046581.01.T01:intron 50.0%
GCCATGCGTAGAGCAAAGAA+AGG - Chr8:75085788-75085807 MsG0880046581.01.T01:intron 50.0%
GGAATCGAATTTGGCGGGAA+TGG - Chr8:75089874-75089893 MsG0880046581.01.T01:intron 50.0%
GGAGAGTGAAGAAAGGTCCA+TGG - Chr8:75088351-75088370 MsG0880046581.01.T01:intron 50.0%
GGGTTCACCACCAACAGTAT+TGG - Chr8:75085729-75085748 MsG0880046581.01.T01:CDS 50.0%
GTCCCGCAATTACTCGCATT+AGG - Chr8:75085813-75085832 MsG0880046581.01.T01:intron 50.0%
TACTCGCATTAGGACCGAGA+TGG - Chr8:75085823-75085842 MsG0880046581.01.T01:intron 50.0%
TCGAATTTGGCGGGAATGGA+AGG - Chr8:75089878-75089897 MsG0880046581.01.T01:intron 50.0%
TGCTATTGCGGCCCATATTG+TGG - Chr8:75090501-75090520 MsG0880046581.01.T01:intron 50.0%
TGCTCTACGCATGGCTGAAT+CGG + Chr8:75085783-75085802 None:intergenic 50.0%
TGGTGTGGTGTACTTGGAGA+GGG + Chr8:75087623-75087642 None:intergenic 50.0%
TTTGGGTGGTGTGGTGTACT+TGG + Chr8:75087629-75087648 None:intergenic 50.0%
! AACTCAAAGAGCACGTGCGA+GGG - Chr8:75088326-75088345 MsG0880046581.01.T01:intron 50.0%
! AGGACCAATTTCGGTAACGG+AGG - Chr8:75086503-75086522 MsG0880046581.01.T01:intron 50.0%
! GGTACGGCCTCTAAAGAAGA+TGG + Chr8:75087790-75087809 None:intergenic 50.0%
!! ACGACCGAGTTGATAGCAAG+TGG + Chr8:75089621-75089640 None:intergenic 50.0%
!! CTTGAGTCGAAGTTCTGAGG+CGG + Chr8:75091755-75091774 None:intergenic 50.0%
!! GAGCGACGCTGTTTTCGAAT+CGG - Chr8:75089916-75089935 MsG0880046581.01.T01:intron 50.0%
AGCTTCCGCATTGAGCTTGG+TGG + Chr8:75090122-75090141 None:intergenic 55.0%
CAGCAACCTACTACAGGTGG+GGG - Chr8:75085709-75085728 MsG0880046581.01.T01:CDS 55.0%
CCAGCAACCTACTACAGGTG+GGG - Chr8:75085708-75085727 MsG0880046581.01.T01:CDS 55.0%
GACCAGCAACCTACTACAGG+TGG - Chr8:75085706-75085725 MsG0880046581.01.T01:CDS 55.0%
GCGGTTGCCATAATCTCTGC+AGG + Chr8:75091736-75091755 None:intergenic 55.0%
GCTCTACGCATGGCTGAATC+GGG + Chr8:75085782-75085801 None:intergenic 55.0%
GGTGTGGTGTACTTGGAGAG+GGG + Chr8:75087622-75087641 None:intergenic 55.0%
GTGGTGTGGTGTACTTGGAG+AGG + Chr8:75087624-75087643 None:intergenic 55.0%
GTGTGGTGTACTTGGAGAGG+GGG + Chr8:75087621-75087640 None:intergenic 55.0%
TAGGACCGAGATGGACGTTG+TGG - Chr8:75085832-75085851 MsG0880046581.01.T01:intron 55.0%
! CAACTCAAAGAGCACGTGCG+AGG - Chr8:75088325-75088344 MsG0880046581.01.T01:intron 55.0%
! GATCCCGTGCTACTCAGAAC+TGG - Chr8:75091192-75091211 MsG0880046581.01.T01:intron 55.0%
CCCCACCTGTAGTAGGTTGC+TGG + Chr8:75085711-75085730 None:intergenic 60.0%
GGTGAACCCCCACCTGTAGT+AGG + Chr8:75085718-75085737 None:intergenic 60.0%
! CAAAGAGCACGTGCGAGGGA+TGG - Chr8:75088330-75088349 MsG0880046581.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 75085704 75092026 75085704 ID=MsG0880046581.01;Name=MsG0880046581.01
Chr8 mRNA 75085704 75092026 75085704 ID=MsG0880046581.01.T01;Parent=MsG0880046581.01;Name=MsG0880046581.01.T01;_AED=0.49;_eAED=0.54;_QI=276|0|0|0.87|1|1|8|0|297
Chr8 exon 75091849 75092026 75091849 ID=MsG0880046581.01.T01:exon:31516;Parent=MsG0880046581.01.T01
Chr8 exon 75089298 75089682 75089298 ID=MsG0880046581.01.T01:exon:31515;Parent=MsG0880046581.01.T01
Chr8 exon 75087562 75087619 75087562 ID=MsG0880046581.01.T01:exon:31514;Parent=MsG0880046581.01.T01
Chr8 exon 75087322 75087447 75087322 ID=MsG0880046581.01.T01:exon:31513;Parent=MsG0880046581.01.T01
Chr8 exon 75086830 75086922 75086830 ID=MsG0880046581.01.T01:exon:31512;Parent=MsG0880046581.01.T01
Chr8 exon 75086591 75086720 75086591 ID=MsG0880046581.01.T01:exon:31511;Parent=MsG0880046581.01.T01
Chr8 exon 75085853 75085990 75085853 ID=MsG0880046581.01.T01:exon:31510;Parent=MsG0880046581.01.T01
Chr8 exon 75085704 75085765 75085704 ID=MsG0880046581.01.T01:exon:31509;Parent=MsG0880046581.01.T01
Chr8 five_prime_UTR 75091849 75092026 75091849 ID=MsG0880046581.01.T01:five_prime_utr;Parent=MsG0880046581.01.T01
Chr8 five_prime_UTR 75089585 75089682 75089585 ID=MsG0880046581.01.T01:five_prime_utr;Parent=MsG0880046581.01.T01
Chr8 CDS 75089298 75089584 75089298 ID=MsG0880046581.01.T01:cds;Parent=MsG0880046581.01.T01
Chr8 CDS 75087562 75087619 75087562 ID=MsG0880046581.01.T01:cds;Parent=MsG0880046581.01.T01
Chr8 CDS 75087322 75087447 75087322 ID=MsG0880046581.01.T01:cds;Parent=MsG0880046581.01.T01
Chr8 CDS 75086830 75086922 75086830 ID=MsG0880046581.01.T01:cds;Parent=MsG0880046581.01.T01
Chr8 CDS 75086591 75086720 75086591 ID=MsG0880046581.01.T01:cds;Parent=MsG0880046581.01.T01
Chr8 CDS 75085853 75085990 75085853 ID=MsG0880046581.01.T01:cds;Parent=MsG0880046581.01.T01
Chr8 CDS 75085704 75085765 75085704 ID=MsG0880046581.01.T01:cds;Parent=MsG0880046581.01.T01
Gene Sequence

>MsG0880046581.01.T01

ATGTATGGTATGATCTTGTTGTGTTCCGAAAATCACGAGTCAAGAAAACAAGGACTTGAGCATATGCGTTTCTTGAGGAAGTCCAAATGTATTGTGAGTTCAAGGAGTAAGGTTAAATATTTAACAAAATATATGTGGAAGAATAATGGGATGTTAATGCGCAATCAAATTCCTCTATGCAACTCAAAGAGCACGTGCGAGGGATGGAGAGTGAAGAAAGGTCCATGGTTTTTACTGGAAGATGAAGATGATGAAGATGATGACATGACAATGTGTGAAGATTGTAGGGAAGCATCCACCAAGCTCAATGCGGAAGCTACTCAAAGATCCCAACATCTCACACAGGGTGTTGATTGCATTCGTCAAAAGGTTCAATCTGTTTTGGATCAAAAGCTCGCTGTTTGGGAAAAATACTGCCTTTATCATTGTTTTTCTCTTCCCGAAGGTTTTCAATTGCCAAACACTCTCAATGGTGAAACAAGTGGGAATGTCATTGATCCTGGTTCTACTTCCAATCTGGAATTAGATGCTCAGTTAGAATCATTGAGGAAAAAACTAGTTGAGGTGGGGAAAGAGTCTGAAATGCTGAATCAAGAAATTCATGCATTAGAGAGTCAGTCTTCTCACAATGCTCGGTATATCAACGAGGCAGTACAATTATTTGAGCAAAACTCTTACGCTGAGTTGTTTCAGGAGATTATGGCAACCGCCTCAGAACTTCGACTCAAGATAGGAAAGCTAAACACCAACAAGATTGAAGAGACCGGAAAAATGAAAGCAAAAAGGATTGACAACAATAAAATGGACATTTCTGCTATATATGCTTCTAAAGGCCTCTCTAATACGAAATTTGAAGATCTTCAAGAATTTGTAACTCTTATGAAGAGTACTTGA
Protein sequence

>MsG0880046581.01.T01

MYGMILLCSENHESRKQGLEHMRFLRKSKCIVSSRSKVKYLTKYMWKNNGMLMRNQIPLCNSKSTCEGWRVKKGPWFLLEDEDDEDDDMTMCEDCREASTKLNAEATQRSQHLTQGVDCIRQKVQSVLDQKLAVWEKYCLYHCFSLPEGFQLPNTLNGETSGNVIDPGSTSNLELDAQLESLRKKLVEVGKESEMLNQEIHALESQSSHNARYINEAVQLFEQNSYAELFQEIMATASELRLKIGKLNTNKIEETGKMKAKRIDNNKMDISAIYASKGLSNTKFEDLQEFVTLMKST*