Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046648.01.T01 | XP_003609073.1 | 93.923 | 181 | 11 | 0 | 1 | 181 | 1 | 181 | 1.90E-123 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046648.01.T01 | Q9SK27 | 37.857 | 140 | 76 | 4 | 31 | 167 | 30 | 161 | 3.99E-24 | 96.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046648.01.T01 | G7JR03 | 93.923 | 181 | 11 | 0 | 1 | 181 | 1 | 181 | 9.06e-124 | 355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880046648.01 | MsG0080049140.01 | PPI |
| MsG0880046648.01 | MsG0080048781.01 | PPI |
| MsG0380017361.01 | MsG0880046648.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046648.01.T01 | MTR_4g111640 | 93.923 | 181 | 11 | 0 | 1 | 181 | 1 | 181 | 2.30e-127 | 355 |
| MsG0880046648.01.T01 | MTR_4g077787 | 85.475 | 179 | 24 | 2 | 1 | 178 | 1 | 178 | 5.57e-113 | 319 |
| MsG0880046648.01.T01 | MTR_4g112310 | 98.473 | 131 | 2 | 0 | 51 | 181 | 1 | 131 | 9.57e-95 | 271 |
| MsG0880046648.01.T01 | MTR_6g022170 | 55.833 | 120 | 50 | 2 | 23 | 140 | 25 | 143 | 3.27e-43 | 142 |
| MsG0880046648.01.T01 | MTR_2g101300 | 38.356 | 146 | 85 | 3 | 12 | 155 | 5 | 147 | 9.65e-33 | 115 |
| MsG0880046648.01.T01 | MTR_3g105930 | 41.722 | 151 | 78 | 5 | 31 | 173 | 26 | 174 | 1.30e-31 | 112 |
| MsG0880046648.01.T01 | MTR_4g078410 | 36.095 | 169 | 84 | 5 | 31 | 180 | 24 | 187 | 3.65e-30 | 109 |
| MsG0880046648.01.T01 | MTR_2g090580 | 37.838 | 148 | 79 | 4 | 13 | 151 | 8 | 151 | 9.09e-30 | 108 |
| MsG0880046648.01.T01 | MTR_2g079030 | 37.821 | 156 | 82 | 3 | 14 | 158 | 7 | 158 | 8.00e-28 | 108 |
| MsG0880046648.01.T01 | MTR_8g463180 | 41.304 | 138 | 72 | 3 | 11 | 146 | 6 | 136 | 2.22e-27 | 105 |
| MsG0880046648.01.T01 | MTR_8g095013 | 37.190 | 121 | 71 | 2 | 13 | 131 | 6 | 123 | 1.46e-25 | 100 |
| MsG0880046648.01.T01 | MTR_8g086360 | 35.811 | 148 | 85 | 4 | 8 | 153 | 3 | 142 | 1.87e-25 | 97.4 |
| MsG0880046648.01.T01 | MTR_1g014120 | 36.424 | 151 | 76 | 6 | 7 | 146 | 4 | 145 | 4.40e-25 | 96.3 |
| MsG0880046648.01.T01 | MTR_8g094990 | 36.364 | 121 | 72 | 2 | 13 | 131 | 6 | 123 | 8.84e-24 | 95.1 |
| MsG0880046648.01.T01 | MTR_2g090575 | 37.398 | 123 | 68 | 3 | 12 | 132 | 8 | 123 | 2.35e-23 | 95.1 |
| MsG0880046648.01.T01 | MTR_7g090170 | 37.226 | 137 | 64 | 6 | 29 | 160 | 24 | 143 | 7.68e-21 | 84.3 |
| MsG0880046648.01.T01 | MTR_4g124280 | 36.735 | 147 | 68 | 5 | 32 | 157 | 25 | 167 | 1.00e-20 | 85.9 |
| MsG0880046648.01.T01 | MTR_8g095020 | 35.246 | 122 | 72 | 3 | 13 | 132 | 6 | 122 | 1.24e-20 | 87.0 |
| MsG0880046648.01.T01 | MTR_1g077790 | 37.143 | 105 | 63 | 2 | 29 | 131 | 26 | 129 | 1.60e-20 | 84.3 |
| MsG0880046648.01.T01 | MTR_4g081100 | 34.426 | 122 | 72 | 3 | 13 | 132 | 17 | 132 | 2.74e-20 | 84.7 |
| MsG0880046648.01.T01 | MTR_2g083250 | 38.095 | 105 | 61 | 3 | 31 | 132 | 25 | 128 | 2.12e-19 | 82.8 |
| MsG0880046648.01.T01 | MTR_4g114870 | 37.255 | 102 | 60 | 2 | 32 | 131 | 191 | 290 | 2.89e-18 | 81.3 |
| MsG0880046648.01.T01 | MTR_4g114870 | 31.667 | 120 | 77 | 3 | 30 | 146 | 27 | 144 | 5.09e-15 | 72.0 |
| MsG0880046648.01.T01 | MTR_5g006040 | 30.909 | 165 | 100 | 6 | 26 | 181 | 20 | 179 | 4.16e-18 | 77.8 |
| MsG0880046648.01.T01 | MTR_0334s0010 | 35.294 | 102 | 62 | 2 | 31 | 131 | 27 | 125 | 6.87e-17 | 75.1 |
| MsG0880046648.01.T01 | MTR_1g090420 | 31.250 | 144 | 93 | 3 | 11 | 151 | 7 | 147 | 1.14e-16 | 75.1 |
| MsG0880046648.01.T01 | MTR_4g067200 | 30.709 | 127 | 82 | 3 | 14 | 136 | 10 | 134 | 1.53e-16 | 73.6 |
| MsG0880046648.01.T01 | MTR_4g066110 | 30.709 | 127 | 82 | 3 | 14 | 136 | 10 | 134 | 1.53e-16 | 73.6 |
| MsG0880046648.01.T01 | MTR_6g083240 | 32.000 | 150 | 89 | 5 | 32 | 173 | 27 | 171 | 7.95e-16 | 71.6 |
| MsG0880046648.01.T01 | MTR_1g104800 | 34.906 | 106 | 63 | 2 | 32 | 135 | 25 | 126 | 1.40e-15 | 71.2 |
| MsG0880046648.01.T01 | MTR_3g092170 | 28.834 | 163 | 88 | 3 | 13 | 151 | 6 | 164 | 1.01e-14 | 70.5 |
| MsG0880046648.01.T01 | MTR_2g088990 | 32.174 | 115 | 70 | 3 | 29 | 141 | 22 | 130 | 1.62e-14 | 69.3 |
| MsG0880046648.01.T01 | MTR_3g099570 | 31.690 | 142 | 84 | 6 | 14 | 151 | 7 | 139 | 4.10e-14 | 67.4 |
| MsG0880046648.01.T01 | MTR_6g023760 | 36.538 | 104 | 58 | 3 | 30 | 131 | 24 | 121 | 1.37e-13 | 65.9 |
| MsG0880046648.01.T01 | MTR_3g099580 | 34.127 | 126 | 71 | 4 | 9 | 131 | 4 | 120 | 1.60e-13 | 65.9 |
| MsG0880046648.01.T01 | MTR_6g013420 | 28.859 | 149 | 93 | 5 | 4 | 146 | 8 | 149 | 2.56e-13 | 65.1 |
| MsG0880046648.01.T01 | MTR_4g130780 | 33.588 | 131 | 76 | 6 | 7 | 131 | 4 | 129 | 6.97e-12 | 61.2 |
| MsG0880046648.01.T01 | MTR_2g025580 | 27.811 | 169 | 110 | 5 | 14 | 176 | 7 | 169 | 8.85e-12 | 60.8 |
| MsG0880046648.01.T01 | MTR_3g099540 | 32.039 | 103 | 63 | 3 | 30 | 131 | 25 | 121 | 9.41e-12 | 60.1 |
| MsG0880046648.01.T01 | MTR_4g114830 | 30.952 | 126 | 80 | 5 | 26 | 146 | 22 | 145 | 1.49e-11 | 60.1 |
| MsG0880046648.01.T01 | MTR_3g099980 | 32.258 | 124 | 74 | 4 | 14 | 133 | 7 | 124 | 9.96e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046648.01.T01 | AT1G48940 | 48.851 | 174 | 71 | 4 | 11 | 173 | 10 | 176 | 3.28e-52 | 165 |
| MsG0880046648.01.T01 | AT3G18590 | 64.151 | 106 | 38 | 0 | 27 | 132 | 22 | 127 | 7.96e-50 | 159 |
| MsG0880046648.01.T01 | AT5G14345 | 43.704 | 135 | 70 | 2 | 12 | 146 | 1 | 129 | 9.87e-36 | 122 |
| MsG0880046648.01.T01 | AT1G79800 | 41.129 | 124 | 72 | 1 | 12 | 135 | 14 | 136 | 5.22e-31 | 111 |
| MsG0880046648.01.T01 | AT4G28365 | 38.194 | 144 | 78 | 3 | 12 | 148 | 9 | 148 | 1.61e-30 | 110 |
| MsG0880046648.01.T01 | AT4G31840 | 40.559 | 143 | 77 | 4 | 12 | 151 | 10 | 147 | 8.91e-30 | 108 |
| MsG0880046648.01.T01 | AT5G53870 | 35.632 | 174 | 92 | 5 | 1 | 164 | 1 | 164 | 4.06e-28 | 108 |
| MsG0880046648.01.T01 | AT5G53870 | 35.632 | 174 | 92 | 5 | 1 | 164 | 1 | 164 | 5.46e-28 | 107 |
| MsG0880046648.01.T01 | AT4G32490 | 36.429 | 140 | 83 | 2 | 28 | 165 | 27 | 162 | 2.22e-26 | 100 |
| MsG0880046648.01.T01 | AT2G25060 | 37.857 | 140 | 76 | 4 | 31 | 167 | 30 | 161 | 4.07e-25 | 96.3 |
| MsG0880046648.01.T01 | AT5G57920 | 43.363 | 113 | 57 | 4 | 25 | 132 | 13 | 123 | 3.62e-23 | 91.3 |
| MsG0880046648.01.T01 | AT4G30590 | 38.710 | 124 | 71 | 3 | 12 | 132 | 8 | 129 | 8.37e-23 | 90.5 |
| MsG0880046648.01.T01 | AT5G57920 | 43.810 | 105 | 54 | 3 | 31 | 132 | 22 | 124 | 9.47e-23 | 90.1 |
| MsG0880046648.01.T01 | AT5G57920 | 41.176 | 119 | 62 | 4 | 31 | 143 | 54 | 170 | 1.99e-22 | 90.1 |
| MsG0880046648.01.T01 | AT5G25090 | 41.667 | 120 | 64 | 4 | 17 | 133 | 12 | 128 | 7.45e-22 | 87.8 |
| MsG0880046648.01.T01 | AT4G27520 | 31.944 | 144 | 92 | 2 | 5 | 146 | 4 | 143 | 4.99e-21 | 88.6 |
| MsG0880046648.01.T01 | AT1G64640 | 30.216 | 139 | 92 | 2 | 12 | 148 | 13 | 148 | 3.34e-20 | 83.6 |
| MsG0880046648.01.T01 | AT3G20570 | 36.538 | 104 | 61 | 2 | 31 | 132 | 29 | 129 | 3.59e-20 | 84.0 |
| MsG0880046648.01.T01 | AT2G31050 | 33.571 | 140 | 84 | 3 | 3 | 140 | 2 | 134 | 4.38e-19 | 80.9 |
| MsG0880046648.01.T01 | AT2G26720 | 36.885 | 122 | 70 | 3 | 13 | 132 | 10 | 126 | 7.28e-19 | 80.5 |
| MsG0880046648.01.T01 | AT2G23990 | 34.483 | 145 | 81 | 7 | 12 | 151 | 11 | 146 | 1.72e-18 | 79.7 |
| MsG0880046648.01.T01 | AT2G32300 | 33.071 | 127 | 75 | 4 | 29 | 151 | 23 | 143 | 1.04e-17 | 78.6 |
| MsG0880046648.01.T01 | AT2G32300 | 33.333 | 126 | 74 | 4 | 30 | 151 | 54 | 173 | 1.69e-17 | 78.6 |
| MsG0880046648.01.T01 | AT3G60270 | 33.333 | 102 | 61 | 3 | 32 | 132 | 26 | 121 | 1.69e-14 | 68.6 |
| MsG0880046648.01.T01 | AT5G26330 | 29.851 | 134 | 80 | 4 | 1 | 132 | 1 | 122 | 2.06e-14 | 68.2 |
| MsG0880046648.01.T01 | AT2G23990 | 30.488 | 164 | 81 | 8 | 12 | 151 | 11 | 165 | 4.32e-14 | 68.2 |
| MsG0880046648.01.T01 | AT5G07475 | 30.657 | 137 | 87 | 3 | 12 | 146 | 10 | 140 | 9.98e-14 | 66.6 |
| MsG0880046648.01.T01 | AT2G27035 | 30.631 | 111 | 66 | 5 | 35 | 142 | 32 | 134 | 1.78e-11 | 60.1 |
Find 40 sgRNAs with CRISPR-Local
Find 52 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAGTTGGTGGTAAAAT+TGG | 0.248593 | 8:-76124425 | MsG0880046648.01.T01:CDS |
| TTTCTTTGCCTCCCAATCTT+TGG | 0.264284 | 8:-76124465 | MsG0880046648.01.T01:CDS |
| TCATCACCATCCTTTGAGTT+AGG | 0.279895 | 8:+76124392 | None:intergenic |
| GGTGAGGGTGCTGTTGGTTC+AGG | 0.348949 | 8:+76123903 | None:intergenic |
| CTATTTGCTTTGTCATTCCT+TGG | 0.356691 | 8:-76123801 | MsG0880046648.01.T01:CDS |
| TACTTCATTAGTGGTGTTAG+TGG | 0.359912 | 8:-76123975 | MsG0880046648.01.T01:CDS |
| GTGAATGCTGTGATAGTAAT+AGG | 0.400127 | 8:+76123825 | None:intergenic |
| TACAATTGATGACCAAAGAT+TGG | 0.408666 | 8:+76124453 | None:intergenic |
| CATCACCATCCTTTGAGTTA+GGG | 0.425498 | 8:+76124393 | None:intergenic |
| GGATTGTTCTACTTCATTAG+TGG | 0.430222 | 8:-76123984 | MsG0880046648.01.T01:CDS |
| GTGATGAAATGTACAACAAA+TGG | 0.453312 | 8:-76124376 | MsG0880046648.01.T01:CDS |
| GCAGCTTTAGAATGTGCTAT+TGG | 0.459227 | 8:+76123858 | None:intergenic |
| TCGACTCGTCCACTCTTCTT+CGG | 0.480946 | 8:-76124044 | MsG0880046648.01.T01:CDS |
| GCAAAGGAAAAGTGGGTATG+AGG | 0.483957 | 8:+76124496 | None:intergenic |
| AGTTGGTGGTAAAATTGGTT+GGG | 0.488516 | 8:-76124420 | MsG0880046648.01.T01:CDS |
| GCATTCTCATTTGCAGATTG+TGG | 0.492826 | 8:+76123882 | None:intergenic |
| ACAATTGATGACCAAAGATT+GGG | 0.505414 | 8:+76124454 | None:intergenic |
| GATTGTGGTGAGGGTGCTGT+TGG | 0.512152 | 8:+76123897 | None:intergenic |
| AATTGTACTGAATTTGAAGT+TGG | 0.513642 | 8:-76124437 | MsG0880046648.01.T01:CDS |
| TCATTTGCAGATTGTGGTGA+GGG | 0.517209 | 8:+76123888 | None:intergenic |
| CCATTGTTTCCGAAGAAGAG+TGG | 0.518696 | 8:+76124035 | None:intergenic |
| CTCATTTGCAGATTGTGGTG+AGG | 0.521847 | 8:+76123887 | None:intergenic |
| ATAATCAAGCAAAGGAAAAG+TGG | 0.531969 | 8:+76124488 | None:intergenic |
| TGTACTGAATTTGAAGTTGG+TGG | 0.533474 | 8:-76124434 | MsG0880046648.01.T01:CDS |
| CTAATGAAGTAGAACAATCC+TGG | 0.545709 | 8:+76123987 | None:intergenic |
| AAGTTGGTGGTAAAATTGGT+TGG | 0.549766 | 8:-76124421 | MsG0880046648.01.T01:CDS |
| TGATGAAATGTACAACAAAT+GGG | 0.552171 | 8:-76124375 | MsG0880046648.01.T01:CDS |
| TAATCAAGCAAAGGAAAAGT+GGG | 0.571116 | 8:+76124489 | None:intergenic |
| CCACTCTTCTTCGGAAACAA+TGG | 0.572032 | 8:-76124035 | MsG0880046648.01.T01:CDS |
| CGAGAAAGATTCAGTGATGG+TGG | 0.591369 | 8:-76124096 | MsG0880046648.01.T01:CDS |
| CTTCGGAAACAATGGCAACA+CGG | 0.597439 | 8:-76124027 | MsG0880046648.01.T01:CDS |
| TGGTGGTAAAATTGGTTGGG+TGG | 0.599284 | 8:-76124417 | MsG0880046648.01.T01:CDS |
| GTTAGTGGTCATTGTACAAG+AGG | 0.601760 | 8:-76123960 | MsG0880046648.01.T01:CDS |
| CAAAGAAAATAATCAAGCAA+AGG | 0.602288 | 8:+76124480 | None:intergenic |
| TTGGGTGGTCCCTAACTCAA+AGG | 0.612930 | 8:-76124402 | MsG0880046648.01.T01:CDS |
| GTATGAGGAAGCTTTGAAGA+TGG | 0.616797 | 8:+76124511 | None:intergenic |
| TTCAAGCATAAATCATGCCA+AGG | 0.629433 | 8:+76123784 | None:intergenic |
| GTGGTCCCTAACTCAAAGGA+TGG | 0.629713 | 8:-76124398 | MsG0880046648.01.T01:CDS |
| ATTGATGACCAAAGATTGGG+AGG | 0.657515 | 8:+76124457 | None:intergenic |
| GTACGAGAAAGATTCAGTGA+TGG | 0.658831 | 8:-76124099 | MsG0880046648.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGTATCTTAAAATTAAAT+CGG | + | Chr8:76124007-76124026 | None:intergenic | 10.0% |
| !! | CAAAAGTTATATAACATAAA+TGG | + | Chr8:76124159-76124178 | None:intergenic | 15.0% |
| !!! | TTTCTAAAAAGAAATGAATA+AGG | - | Chr8:76124061-76124080 | MsG0880046648.01.T01:CDS | 15.0% |
| !!! | ATCAATTTTGAATCTGTTTT+GGG | + | Chr8:76123957-76123976 | None:intergenic | 20.0% |
| !!! | TAACTTTTGTTTTGAACTTT+TGG | - | Chr8:76124170-76124189 | MsG0880046648.01.T01:intron | 20.0% |
| ! | AAAATTAAATCGGTAAGAAG+TGG | + | Chr8:76123997-76124016 | None:intergenic | 25.0% |
| ! | CAAAGAAAATAATCAAGCAA+AGG | + | Chr8:76123826-76123845 | None:intergenic | 25.0% |
| ! | TGATGAAATGTACAACAAAT+GGG | - | Chr8:76123928-76123947 | MsG0880046648.01.T01:CDS | 25.0% |
| !! | AAAAATGATCATCAAGGTTT+TGG | - | Chr8:76124369-76124388 | MsG0880046648.01.T01:CDS | 25.0% |
| !! | AATTGTACTGAATTTGAAGT+TGG | - | Chr8:76123866-76123885 | MsG0880046648.01.T01:CDS | 25.0% |
| !! | CATCAATTTTGAATCTGTTT+TGG | + | Chr8:76123958-76123977 | None:intergenic | 25.0% |
| AGGACAAAAAATGATCATCA+AGG | - | Chr8:76124363-76124382 | MsG0880046648.01.T01:CDS | 30.0% | |
| ATAATCAAGCAAAGGAAAAG+TGG | + | Chr8:76123818-76123837 | None:intergenic | 30.0% | |
| GTGATGAAATGTACAACAAA+TGG | - | Chr8:76123927-76123946 | MsG0880046648.01.T01:CDS | 30.0% | |
| TAATCAAGCAAAGGAAAAGT+GGG | + | Chr8:76123817-76123836 | None:intergenic | 30.0% | |
| ! | ACAATTGATGACCAAAGATT+GGG | + | Chr8:76123852-76123871 | None:intergenic | 30.0% |
| ! | TACAATTGATGACCAAAGAT+TGG | + | Chr8:76123853-76123872 | None:intergenic | 30.0% |
| !! | TTTGAAGTTGGTGGTAAAAT+TGG | - | Chr8:76123878-76123897 | MsG0880046648.01.T01:CDS | 30.0% |
| CTAATGAAGTAGAACAATCC+TGG | + | Chr8:76124319-76124338 | None:intergenic | 35.0% | |
| CTATTTGCTTTGTCATTCCT+TGG | - | Chr8:76124502-76124521 | MsG0880046648.01.T01:CDS | 35.0% | |
| GGATTGTTCTACTTCATTAG+TGG | - | Chr8:76124319-76124338 | MsG0880046648.01.T01:intron | 35.0% | |
| GTGAATGCTGTGATAGTAAT+AGG | + | Chr8:76124481-76124500 | None:intergenic | 35.0% | |
| TAAGGTCACTACAAAAGTGA+AGG | - | Chr8:76124079-76124098 | MsG0880046648.01.T01:CDS | 35.0% | |
| ! | GTTTTCAAATTTGAACGACC+AGG | - | Chr8:76124298-76124317 | MsG0880046648.01.T01:intron | 35.0% |
| ! | TACTTCATTAGTGGTGTTAG+TGG | - | Chr8:76124328-76124347 | MsG0880046648.01.T01:intron | 35.0% |
| ! | TGTACTGAATTTGAAGTTGG+TGG | - | Chr8:76123869-76123888 | MsG0880046648.01.T01:CDS | 35.0% |
| !! | AAGTTGGTGGTAAAATTGGT+TGG | - | Chr8:76123882-76123901 | MsG0880046648.01.T01:CDS | 35.0% |
| !! | AGTTGGTGGTAAAATTGGTT+GGG | - | Chr8:76123883-76123902 | MsG0880046648.01.T01:CDS | 35.0% |
| GCATTCTCATTTGCAGATTG+TGG | + | Chr8:76124424-76124443 | None:intergenic | 40.0% | |
| GTACGAGAAAGATTCAGTGA+TGG | - | Chr8:76124204-76124223 | MsG0880046648.01.T01:intron | 40.0% | |
| GTTAGTGGTCATTGTACAAG+AGG | - | Chr8:76124343-76124362 | MsG0880046648.01.T01:CDS | 40.0% | |
| TCATTTGCAGATTGTGGTGA+GGG | + | Chr8:76124418-76124437 | None:intergenic | 40.0% | |
| TTTCTTTGCCTCCCAATCTT+TGG | - | Chr8:76123838-76123857 | MsG0880046648.01.T01:CDS | 40.0% | |
| ! | ATTGATGACCAAAGATTGGG+AGG | + | Chr8:76123849-76123868 | None:intergenic | 40.0% |
| ! | CATCACCATCCTTTGAGTTA+GGG | + | Chr8:76123913-76123932 | None:intergenic | 40.0% |
| ! | TCATCACCATCCTTTGAGTT+AGG | + | Chr8:76123914-76123933 | None:intergenic | 40.0% |
| !! | GCAGCTTTAGAATGTGCTAT+TGG | + | Chr8:76124448-76124467 | None:intergenic | 40.0% |
| !! | GTATGAGGAAGCTTTGAAGA+TGG | + | Chr8:76123795-76123814 | None:intergenic | 40.0% |
| CCACTCTTCTTCGGAAACAA+TGG | - | Chr8:76124268-76124287 | MsG0880046648.01.T01:intron | 45.0% | |
| CCATTGTTTCCGAAGAAGAG+TGG | + | Chr8:76124271-76124290 | None:intergenic | 45.0% | |
| CGAGAAAGATTCAGTGATGG+TGG | - | Chr8:76124207-76124226 | MsG0880046648.01.T01:intron | 45.0% | |
| CTCATTTGCAGATTGTGGTG+AGG | + | Chr8:76124419-76124438 | None:intergenic | 45.0% | |
| CTTCGGAAACAATGGCAACA+CGG | - | Chr8:76124276-76124295 | MsG0880046648.01.T01:intron | 45.0% | |
| GCAAAGGAAAAGTGGGTATG+AGG | + | Chr8:76123810-76123829 | None:intergenic | 45.0% | |
| TGGTGGTAAAATTGGTTGGG+TGG | - | Chr8:76123886-76123905 | MsG0880046648.01.T01:CDS | 45.0% | |
| !!! | ATGATATATTTTATTTTTAA+AGG | - | Chr8:76124111-76124130 | MsG0880046648.01.T01:intron | 5.0% |
| !!! | TGATATATTTTATTTTTAAA+GGG | - | Chr8:76124112-76124131 | MsG0880046648.01.T01:intron | 5.0% |
| GTGGTCCCTAACTCAAAGGA+TGG | - | Chr8:76123905-76123924 | MsG0880046648.01.T01:CDS | 50.0% | |
| TTGGGTGGTCCCTAACTCAA+AGG | - | Chr8:76123901-76123920 | MsG0880046648.01.T01:CDS | 50.0% | |
| ! | TCGACTCGTCCACTCTTCTT+CGG | - | Chr8:76124259-76124278 | MsG0880046648.01.T01:intron | 50.0% |
| !! | GATTGTGGTGAGGGTGCTGT+TGG | + | Chr8:76124409-76124428 | None:intergenic | 55.0% |
| !! | GGTGAGGGTGCTGTTGGTTC+AGG | + | Chr8:76124403-76124422 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 76123785 | 76124540 | 76123785 | ID=MsG0880046648.01;Name=MsG0880046648.01 |
| Chr8 | mRNA | 76123785 | 76124540 | 76123785 | ID=MsG0880046648.01.T01;Parent=MsG0880046648.01;Name=MsG0880046648.01.T01;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|181 |
| Chr8 | exon | 76124339 | 76124540 | 76124339 | ID=MsG0880046648.01.T01:exon:8348;Parent=MsG0880046648.01.T01 |
| Chr8 | exon | 76123785 | 76124128 | 76123785 | ID=MsG0880046648.01.T01:exon:8347;Parent=MsG0880046648.01.T01 |
| Chr8 | CDS | 76124339 | 76124540 | 76124339 | ID=MsG0880046648.01.T01:cds;Parent=MsG0880046648.01.T01 |
| Chr8 | CDS | 76123785 | 76124128 | 76123785 | ID=MsG0880046648.01.T01:cds;Parent=MsG0880046648.01.T01 |
| Gene Sequence |
| Protein sequence |
