AlfalfaGEDB | MsG0380017361.01

M. sativa cultivar ZhongmuNo.1 / MsG0380017361.01

KEGG: -
GO: GO:0009055
PFAM: PF02298

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017361.01.T01	XP_003603289.1	77.528	178	7	1	1	145	1	178	1.56E-72	225

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017361.01.T01	Q9SK27	40.994	161	63	2	11	139	15	175	2.16E-34	121

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017361.01.T01	G7J9U0	77.528	178	7	1	1	145	1	178	7.45e-73	225

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0380017361.01	0.804099	2.541139e-49	1.298884e-46
MsG0080048258.01	MsG0380017361.01	0.825367	4.871804e-54	4.431486e-51
MsG0080048311.01	MsG0380017361.01	0.859234	4.762696e-63	1.249016e-59
MsG0080048775.01	MsG0380017361.01	0.852360	4.858321e-61	1.012641e-57
MsG0080048781.01	MsG0380017361.01	0.944008	4.280590e-103	5.981630e-98
MsG0080049140.01	MsG0380017361.01	0.850652	1.478407e-60	2.916359e-57
MsG0180000076.01	MsG0380017361.01	0.828865	7.087723e-55	7.132306e-52
MsG0180000111.01	MsG0380017361.01	0.838591	2.626514e-57	3.534466e-54
MsG0180000373.01	MsG0380017361.01	0.816073	6.672207e-52	4.681063e-49
MsG0180001293.01	MsG0380017361.01	0.843155	1.667717e-58	2.585742e-55
MsG0180002211.01	MsG0380017361.01	0.824607	7.364513e-54	6.555997e-51
MsG0180002218.01	MsG0380017361.01	0.830713	2.515025e-55	2.671395e-52
MsG0180002397.01	MsG0380017361.01	0.867397	1.410197e-65	4.917371e-62
MsG0180002421.01	MsG0380017361.01	0.836399	9.575574e-57	1.205291e-53
MsG0180002429.01	MsG0380017361.01	0.822803	1.948429e-53	1.647806e-50
MsG0180002583.01	MsG0380017361.01	0.855546	5.868071e-62	1.359574e-58
MsG0180002984.01	MsG0380017361.01	0.806754	7.055579e-50	3.860626e-47
MsG0180003427.01	MsG0380017361.01	0.845466	3.991050e-59	6.657134e-56
MsG0180003485.01	MsG0380017361.01	0.858582	7.463582e-63	1.913896e-59
MsG0180003658.01	MsG0380017361.01	0.885319	9.008126e-72	6.154931e-68
MsG0180003698.01	MsG0380017361.01	0.842314	2.788586e-58	4.211811e-55
MsG0180003796.01	MsG0380017361.01	0.886993	2.107835e-72	1.539696e-68
MsG0180003857.01	MsG0380017361.01	0.859149	5.050532e-63	1.320599e-59
MsG0180004027.01	MsG0380017361.01	0.812591	3.924886e-51	2.505623e-48
MsG0180004120.01	MsG0380017361.01	0.808814	2.574412e-50	1.486487e-47
MsG0180004126.01	MsG0380017361.01	0.894542	2.236006e-75	2.232418e-71
MsG0180004184.01	MsG0380017361.01	0.820978	5.155461e-53	4.141320e-50
MsG0180004185.01	MsG0380017361.01	0.840608	7.850792e-58	1.124124e-54
MsG0180004299.01	MsG0380017361.01	0.858809	6.384688e-63	1.650061e-59
MsG0180004538.01	MsG0380017361.01	0.857034	2.148879e-62	5.231714e-59
MsG0180004583.01	MsG0380017361.01	0.838535	2.714387e-57	3.646399e-54
MsG0180004661.01	MsG0380017361.01	0.805647	1.206824e-49	6.419102e-47
MsG0180004806.01	MsG0380017361.01	0.825654	4.166455e-54	3.821157e-51
MsG0180004995.01	MsG0380017361.01	0.830855	2.320928e-55	2.475565e-52
MsG0180005002.01	MsG0380017361.01	0.820590	6.328201e-53	5.027938e-50
MsG0180005048.01	MsG0380017361.01	0.829361	5.374519e-55	5.488899e-52
MsG0180005435.01	MsG0380017361.01	0.845753	3.336766e-59	5.618112e-56
MsG0180005655.01	MsG0380017361.01	0.806761	7.030651e-50	3.847674e-47
MsG0180005835.01	MsG0380017361.01	0.857477	1.589514e-62	3.928265e-59
MsG0180006133.01	MsG0380017361.01	0.864674	1.026091e-64	3.248719e-61
MsG0280006310.01	MsG0380017361.01	0.807263	5.506668e-50	3.053221e-47
MsG0280006311.01	MsG0380017361.01	0.805789	1.126636e-49	6.014658e-47
MsG0280010579.01	MsG0380017361.01	0.871344	7.341610e-67	2.951525e-63
MsG0280010779.01	MsG0380017361.01	0.803358	3.621173e-49	1.815909e-46
MsG0280010795.01	MsG0380017361.01	0.839549	1.482889e-57	2.054605e-54
MsG0280010977.01	MsG0380017361.01	0.807238	5.574132e-50	3.088599e-47
MsG0280011083.01	MsG0380017361.01	0.803106	4.083584e-49	2.034581e-46
MsG0280011154.01	MsG0380017361.01	0.879966	8.092030e-70	4.478188e-66
MsG0280011331.01	MsG0380017361.01	0.808894	2.474607e-50	1.431872e-47
MsG0380012325.01	MsG0380017361.01	0.802437	5.613610e-49	2.749809e-46
MsG0380012788.01	MsG0380017361.01	0.853817	1.859162e-61	4.068308e-58
MsG0380012808.01	MsG0380017361.01	0.863439	2.487509e-64	7.540564e-61
MsG0380013041.01	MsG0380017361.01	0.813106	3.026822e-51	1.958723e-48
MsG0380013584.01	MsG0380017361.01	0.827845	1.249264e-54	1.220418e-51
MsG0380014387.01	MsG0380017361.01	0.820559	6.433026e-53	5.107196e-50
MsG0380014666.01	MsG0380017361.01	0.821122	4.775998e-53	3.851602e-50
MsG0380014751.01	MsG0380017361.01	0.801512	8.694116e-49	4.159786e-46
MsG0380014754.01	MsG0380017361.01	0.803512	3.364278e-49	1.693932e-46
MsG0380015058.01	MsG0380017361.01	0.827338	1.653021e-54	1.591378e-51
MsG0380015161.01	MsG0380017361.01	0.819765	9.778068e-53	7.593904e-50
MsG0380015219.01	MsG0380017361.01	0.839953	1.163884e-57	1.633266e-54
MsG0380015234.01	MsG0380017361.01	0.804126	2.509358e-49	1.283493e-46
MsG0380015394.01	MsG0380017361.01	0.878135	3.586450e-69	1.851136e-65
MsG0380015548.01	MsG0380017361.01	0.834447	2.981384e-56	3.539217e-53
MsG0380015816.01	MsG0380017361.01	0.824361	8.417194e-54	7.438900e-51
MsG0380015954.01	MsG0380017361.01	0.825868	3.706384e-54	3.420199e-51
MsG0380016027.01	MsG0380017361.01	0.845438	4.062048e-59	6.769192e-56
MsG0380016091.01	MsG0380017361.01	0.876042	1.912534e-68	9.135318e-65
MsG0380016092.01	MsG0380017361.01	0.822350	2.482307e-53	2.072609e-50
MsG0380016217.01	MsG0380017361.01	0.857800	1.274836e-62	3.184466e-59
MsG0380016225.01	MsG0380017361.01	0.853267	2.675788e-61	5.748706e-58
MsG0380016703.01	MsG0380017361.01	0.810902	9.149194e-51	5.584076e-48
MsG0380017024.01	MsG0380017361.01	0.803361	3.616447e-49	1.813638e-46
MsG0380017164.01	MsG0380017361.01	0.868399	6.722930e-66	2.428291e-62
MsG0380017181.01	MsG0380017361.01	0.829346	5.417958e-55	5.530994e-52
MsG0380017282.01	MsG0380017361.01	0.815488	9.011901e-52	6.222141e-49
MsG0380017332.01	MsG0380017361.01	0.812773	3.581338e-51	2.297150e-48
MsG0380017361.01	MsG0380017605.01	0.853199	2.797892e-61	5.997219e-58
MsG0380017361.01	MsG0380017632.01	0.853469	2.341705e-61	5.065083e-58
MsG0380017361.01	MsG0480018397.01	0.810294	1.238341e-50	7.435915e-48
MsG0380017361.01	MsG0480018526.01	0.905928	2.554973e-80	4.229220e-76
MsG0380017361.01	MsG0480018785.01	0.854364	1.293238e-61	2.880966e-58
MsG0380017361.01	MsG0480018885.01	0.829046	6.408107e-55	6.482856e-52
MsG0380017361.01	MsG0480018918.01	0.813855	2.071599e-51	1.368214e-48
MsG0380017361.01	MsG0480019588.01	0.802303	5.981676e-49	2.920211e-46
MsG0380017361.01	MsG0480019635.01	0.835365	1.751285e-56	2.137030e-53
MsG0380017361.01	MsG0480020856.01	0.847144	1.392742e-59	2.452582e-56
MsG0380017361.01	MsG0480020965.01	0.814388	1.580175e-51	1.058930e-48
MsG0380017361.01	MsG0480021013.01	0.833355	5.593843e-56	6.426282e-53
MsG0380017361.01	MsG0480021016.01	0.807610	4.646667e-50	2.599627e-47
MsG0380017361.01	MsG0480021901.01	0.828804	7.331764e-55	7.365269e-52
MsG0380017361.01	MsG0480021902.01	0.824341	8.505289e-54	7.512304e-51
MsG0380017361.01	MsG0480022331.01	0.828305	9.678281e-55	9.582189e-52
MsG0380017361.01	MsG0480022559.01	0.854529	1.158691e-61	2.595565e-58
MsG0380017361.01	MsG0480022784.01	0.857086	2.073890e-62	5.058327e-59
MsG0380017361.01	MsG0480022931.01	0.838410	2.923429e-57	3.912282e-54
MsG0380017361.01	MsG0480022982.01	0.817206	3.719274e-52	2.691333e-49
MsG0380017361.01	MsG0480022991.01	0.849664	2.797352e-60	5.342172e-57
MsG0380017361.01	MsG0480023003.01	0.849197	3.773531e-60	7.099370e-57
MsG0380017361.01	MsG0480023194.01	0.858738	6.702806e-63	1.728150e-59
MsG0380017361.01	MsG0480023262.01	0.847764	9.407859e-60	1.689545e-56
MsG0380017361.01	MsG0480023296.01	0.884865	1.331149e-71	8.929067e-68
MsG0380017361.01	MsG0480023450.01	0.832854	7.454355e-56	8.435834e-53
MsG0380017361.01	MsG0480023458.01	0.818139	2.291039e-52	1.700830e-49
MsG0380017361.01	MsG0480023484.01	0.824133	9.521974e-54	8.361039e-51
MsG0380017361.01	MsG0480023653.01	0.844096	9.338284e-59	1.491589e-55
MsG0380017361.01	MsG0480023672.01	0.908550	1.512987e-81	2.820551e-77
MsG0380017361.01	MsG0480023706.01	0.841028	6.091264e-58	8.836113e-55
MsG0380017361.01	MsG0480024002.01	0.804441	2.157533e-49	1.112476e-46
MsG0380017361.01	MsG0580024060.01	0.802042	6.766989e-49	3.281524e-46
MsG0380017361.01	MsG0580024109.01	0.804119	2.516663e-49	1.287042e-46
MsG0380017361.01	MsG0580024489.01	0.846227	2.479319e-59	4.238078e-56
MsG0380017361.01	MsG0580024657.01	0.853723	1.979580e-61	4.317859e-58
MsG0380017361.01	MsG0580024742.01	0.839625	1.417139e-57	1.968248e-54
MsG0380017361.01	MsG0580024748.01	0.821226	4.518992e-53	3.654966e-50
MsG0380017361.01	MsG0580024787.01	0.900183	9.449416e-78	1.207854e-73
MsG0380017361.01	MsG0580024813.01	0.874143	8.503577e-68	3.785584e-64
MsG0380017361.01	MsG0580024954.01	0.870291	1.629893e-66	6.307256e-63
MsG0380017361.01	MsG0580025093.01	0.882932	6.876750e-71	4.270931e-67
MsG0380017361.01	MsG0580025177.01	0.841619	4.256914e-58	6.290685e-55
MsG0380017361.01	MsG0580025186.01	0.841574	4.376007e-58	6.457231e-55
MsG0380017361.01	MsG0580025385.01	0.806159	9.418297e-50	5.075889e-47
MsG0380017361.01	MsG0580025506.01	0.825792	3.864969e-54	3.558695e-51
MsG0380017361.01	MsG0580025515.01	0.830291	3.189154e-55	3.345758e-52
MsG0380017361.01	MsG0580025526.01	0.801437	9.007618e-49	4.301623e-46
MsG0380017361.01	MsG0580025614.01	0.800875	1.173564e-48	5.525649e-46
MsG0380017361.01	MsG0580025766.01	0.801335	9.449931e-49	4.501275e-46
MsG0380017361.01	MsG0580025775.01	0.878054	3.829614e-69	1.970092e-65
MsG0380017361.01	MsG0580026142.01	0.829382	5.311178e-55	5.427430e-52
MsG0380017361.01	MsG0580026186.01	0.804856	1.767209e-49	9.211147e-47
MsG0380017361.01	MsG0580028756.01	0.895888	6.245790e-76	6.597871e-72
MsG0380017361.01	MsG0580028923.01	0.844385	7.814274e-59	1.259333e-55
MsG0380017361.01	MsG0580028927.01	0.807902	4.027525e-50	2.270420e-47
MsG0380017361.01	MsG0580029102.01	0.812915	3.333888e-51	2.146477e-48
MsG0380017361.01	MsG0580029123.01	0.849455	3.197898e-60	6.065545e-57
MsG0380017361.01	MsG0580029197.01	0.808143	3.580504e-50	2.031453e-47
MsG0380017361.01	MsG0580029261.01	0.871775	5.283458e-67	2.157533e-63
MsG0380017361.01	MsG0580029268.01	0.815790	7.716499e-52	5.372106e-49
MsG0380017361.01	MsG0580029298.01	0.828729	7.647427e-55	7.665052e-52
MsG0380017361.01	MsG0580029591.01	0.899782	1.409483e-77	1.768658e-73
MsG0380017361.01	MsG0680030383.01	0.801740	7.806765e-49	3.756677e-46
MsG0380017361.01	MsG0680031616.01	0.867459	1.347829e-65	4.709533e-62
MsG0380017361.01	MsG0680031701.01	0.834049	3.751261e-56	4.400040e-53
MsG0380017361.01	MsG0680032772.01	0.829134	6.101379e-55	6.189127e-52
MsG0380017361.01	MsG0680032773.01	0.843717	1.179802e-58	1.862150e-55
MsG0380017361.01	MsG0680033405.01	0.820273	7.484146e-53	5.894769e-50
MsG0380017361.01	MsG0680033696.01	0.862437	5.069574e-64	1.484797e-60
MsG0380017361.01	MsG0680034764.01	0.817874	2.628920e-52	1.937572e-49
MsG0380017361.01	MsG0680035350.01	0.851134	1.081253e-60	2.167082e-57
MsG0380017361.01	MsG0680035776.01	0.832824	7.580565e-56	8.570828e-53
MsG0380017361.01	MsG0680035878.01	0.824025	1.009420e-53	8.836008e-51
MsG0380017361.01	MsG0780036534.01	0.802306	5.971335e-49	2.915439e-46
MsG0380017361.01	MsG0780037158.01	0.832952	7.044883e-56	7.996008e-53
MsG0380017361.01	MsG0780037741.01	0.856166	3.865731e-62	9.142341e-59
MsG0380017361.01	MsG0780038393.01	0.801439	8.997845e-49	4.297206e-46
MsG0380017361.01	MsG0780038402.01	0.860957	1.437782e-63	4.000785e-60
MsG0380017361.01	MsG0780038445.01	0.819474	1.139757e-52	8.779857e-50
MsG0380017361.01	MsG0780038736.01	0.838384	2.968534e-57	3.969596e-54
MsG0380017361.01	MsG0780039533.01	0.802013	6.862286e-49	3.325232e-46
MsG0380017361.01	MsG0780039861.01	0.907647	4.041068e-81	7.234501e-77
MsG0380017361.01	MsG0780040139.01	0.821181	4.627289e-53	3.737981e-50
MsG0380017361.01	MsG0780040364.01	0.877399	6.483379e-69	3.255685e-65
MsG0380017361.01	MsG0780040533.01	0.833322	5.701714e-56	6.543814e-53
MsG0380017361.01	MsG0780040543.01	0.815847	7.496927e-52	5.226673e-49
MsG0380017361.01	MsG0780040620.01	0.873710	1.190291e-67	5.216322e-64
MsG0380017361.01	MsG0780040641.01	0.853413	2.429972e-61	5.246005e-58
MsG0380017361.01	MsG0780040828.01	0.831277	1.828687e-55	1.974915e-52
MsG0380017361.01	MsG0780041063.01	0.824396	8.255884e-54	7.303498e-51
MsG0380017361.01	MsG0780041132.01	0.867399	1.408360e-65	4.911166e-62
MsG0380017361.01	MsG0780041141.01	0.870035	1.977059e-66	7.580322e-63
MsG0380017361.01	MsG0780041142.01	0.835380	1.735697e-56	2.118914e-53
MsG0380017361.01	MsG0780041143.01	0.919733	3.112585e-87	1.015073e-82
MsG0380017361.01	MsG0780041340.01	0.879217	1.492647e-69	8.026564e-66
MsG0380017361.01	MsG0780041359.01	0.833484	5.194009e-56	5.989660e-53
MsG0380017361.01	MsG0780041756.01	0.843804	1.118725e-58	1.770490e-55
MsG0380017361.01	MsG0880041930.01	0.817120	3.889079e-52	2.807564e-49
MsG0380017361.01	MsG0880042366.01	0.819467	1.144089e-52	8.811510e-50
MsG0380017361.01	MsG0880042629.01	0.812894	3.369683e-51	2.168342e-48
MsG0380017361.01	MsG0880042927.01	0.828031	1.127140e-54	1.107166e-51
MsG0380017361.01	MsG0880043431.01	0.801412	9.116654e-49	4.350860e-46
MsG0380017361.01	MsG0880043516.01	0.841442	4.739873e-58	6.966103e-55
MsG0380017361.01	MsG0880043714.01	0.812543	4.021822e-51	2.564359e-48
MsG0380017361.01	MsG0880043752.01	0.821629	3.646629e-53	2.982630e-50
MsG0380017361.01	MsG0880044340.01	0.821261	4.435874e-53	3.590890e-50
MsG0380017361.01	MsG0880044437.01	0.807224	5.610717e-50	3.107794e-47
MsG0380017361.01	MsG0880044835.01	0.841974	3.431506e-58	5.127329e-55
MsG0380017361.01	MsG0880044989.01	0.829717	4.402092e-55	4.542715e-52
MsG0380017361.01	MsG0880045439.01	0.824009	1.017987e-53	8.907039e-51
MsG0380017361.01	MsG0880045552.01	0.831565	1.552837e-55	1.691591e-52
MsG0380017361.01	MsG0880045584.01	0.850916	1.246068e-60	2.479385e-57
MsG0380017361.01	MsG0880045612.01	0.895075	1.352060e-75	1.381292e-71
MsG0380017361.01	MsG0880045647.01	0.827067	1.919553e-54	1.833159e-51
MsG0380017361.01	MsG0880046208.01	0.851873	6.682740e-61	1.371337e-57
MsG0380017361.01	MsG0880046431.01	0.856691	2.710707e-62	6.523093e-59
MsG0380017361.01	MsG0880046646.01	0.837394	5.335964e-57	6.921257e-54
MsG0380017361.01	MsG0880046885.01	0.861231	1.186023e-63	3.332290e-60
MsG0380017361.01	MsG0880046904.01	0.842805	2.066238e-58	3.168744e-55
MsG0380017361.01	MsG0880046905.01	0.806609	7.569814e-50	4.126558e-47
MsG0380017361.01	MsG0880046906.01	0.816677	4.888113e-52	3.486266e-49
MsG0380017361.01	MsG0880046991.01	0.809680	1.678971e-50	9.921574e-48
MsG0380017361.01	MsG0880047223.01	0.848288	6.742416e-60	1.231404e-56
MsG0380017361.01	MsG0880047226.01	0.849238	3.675084e-60	6.923544e-57
MsG0380017361.01	MsG0880047431.01	0.801565	8.480247e-49	4.062788e-46
MsG0380017361.01	MsG0880047447.01	0.826589	2.497449e-54	2.352086e-51
MsG0380017361.01	MsG0880047466.01	0.864956	8.370917e-65	2.676905e-61
MsG0380017361.01	MsG0880047640.01	0.829428	5.176447e-55	5.296534e-52
MsG0380017361.01	MsG0880047649.01	0.893584	5.487738e-75	5.259418e-71
MsG0280006477.01	MsG0380017361.01	0.831687	1.449782e-55	1.585002e-52
MsG0280006540.01	MsG0380017361.01	0.906870	9.338048e-81	1.613158e-76
MsG0280006563.01	MsG0380017361.01	0.904292	1.429955e-79	2.197285e-75
MsG0280007003.01	MsG0380017361.01	0.804722	1.884457e-49	9.788547e-47
MsG0280007359.01	MsG0380017361.01	0.867463	1.343855e-65	4.696393e-62
MsG0280007419.01	MsG0380017361.01	0.822512	2.276658e-53	1.909682e-50
MsG0280007431.01	MsG0380017361.01	0.833184	6.169012e-56	7.050727e-53
MsG0280007761.01	MsG0380017361.01	0.832360	9.884342e-56	1.102221e-52
MsG0280007983.01	MsG0380017361.01	0.827953	1.176937e-54	1.153422e-51
MsG0280007990.01	MsG0380017361.01	0.803915	2.774939e-49	1.411784e-46
MsG0280008407.01	MsG0380017361.01	0.819264	1.272704e-52	9.746279e-50
MsG0280008679.01	MsG0380017361.01	0.809105	2.230523e-50	1.298035e-47
MsG0280009752.01	MsG0380017361.01	0.870708	1.189794e-66	4.673164e-63
MsG0280009866.01	MsG0380017361.01	0.824380	8.331255e-54	7.366972e-51

PPI

Gene1	Gene2	Type
MsG0380017361.01	MsG0080048266.01	PPI
MsG0380017361.01	MsG0880046591.01	PPI
MsG0380017361.01	MsG0880046648.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017361.01.T01	MTR_3g105930	77.528	178	7	1	1	145	1	178	1.89e-76	225
MsG0380017361.01.T01	MTR_7g090170	73.649	148	23	3	1	132	1	148	2.85e-52	163
MsG0380017361.01.T01	MTR_1g014120	69.474	95	28	1	7	100	4	98	5.12e-43	141
MsG0380017361.01.T01	MTR_4g081100	52.874	87	40	1	11	97	16	101	1.45e-24	94.7
MsG0380017361.01.T01	MTR_8g463180	45.055	91	43	3	12	98	5	92	1.47e-19	83.2
MsG0380017361.01.T01	MTR_2g083250	48.235	85	41	3	24	106	23	106	1.73e-17	77.0
MsG0380017361.01.T01	MTR_4g078410	53.333	75	32	2	24	98	22	93	2.92e-17	75.1
MsG0380017361.01.T01	MTR_4g077787	42.308	104	50	4	1	97	1	101	5.26e-17	74.3
MsG0380017361.01.T01	MTR_2g079030	48.276	87	42	2	12	98	10	93	4.33e-16	74.7
MsG0380017361.01.T01	MTR_2g090575	43.820	89	44	3	12	97	7	92	9.70e-16	73.2
MsG0380017361.01.T01	MTR_2g090580	43.750	96	43	3	10	97	2	94	1.03e-15	71.2
MsG0380017361.01.T01	MTR_2g101300	42.105	76	40	3	23	97	23	95	5.21e-15	69.3
MsG0380017361.01.T01	MTR_8g095013	44.048	84	45	2	14	97	12	93	9.58e-15	70.1
MsG0380017361.01.T01	MTR_2g088990	38.095	84	47	2	14	97	12	90	9.91e-15	68.9
MsG0380017361.01.T01	MTR_4g111640	43.434	99	43	6	8	97	7	101	1.03e-14	68.2
MsG0380017361.01.T01	MTR_8g094990	42.391	92	51	2	14	105	12	101	1.33e-14	69.3
MsG0380017361.01.T01	MTR_4g130780	34.524	84	55	0	15	98	17	100	8.15e-14	65.9
MsG0380017361.01.T01	MTR_4g124280	46.377	69	36	1	29	97	27	94	1.15e-13	66.2
MsG0380017361.01.T01	MTR_6g022170	42.857	77	40	3	23	98	30	103	4.04e-13	63.5
MsG0380017361.01.T01	MTR_4g130800	35.556	90	53	3	12	97	11	99	1.37e-12	63.9
MsG0380017361.01.T01	MTR_8g007035	38.202	89	49	3	10	98	7	89	5.09e-11	58.5
MsG0380017361.01.T01	MTR_8g007020	35.955	89	51	3	10	98	7	89	6.86e-11	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017361.01.T01	AT4G31840	42.373	177	64	4	8	147	2	177	3.21e-37	126
MsG0380017361.01.T01	AT2G25060	40.994	161	63	2	11	139	15	175	2.21e-35	121
MsG0380017361.01.T01	AT5G25090	55.208	96	42	1	6	100	4	99	2.71e-33	116
MsG0380017361.01.T01	AT4G30590	57.609	92	34	1	12	98	8	99	1.48e-32	114
MsG0380017361.01.T01	AT2G23990	46.000	100	54	0	1	100	1	100	4.26e-26	98.6
MsG0380017361.01.T01	AT5G57920	52.632	76	36	0	22	97	18	93	2.52e-25	95.9
MsG0380017361.01.T01	AT5G57920	52.632	76	36	0	22	97	50	125	2.89e-25	96.7
MsG0380017361.01.T01	AT5G57920	52.703	74	35	0	24	97	19	92	9.74e-25	94.4
MsG0380017361.01.T01	AT2G23990	38.655	119	54	1	1	100	1	119	1.05e-21	87.4
MsG0380017361.01.T01	AT3G20570	40.698	86	49	2	12	97	15	98	6.58e-17	74.3
MsG0380017361.01.T01	AT4G28365	39.326	89	48	4	12	97	11	96	6.58e-15	68.9
MsG0380017361.01.T01	AT4G27520	42.529	87	47	2	12	98	16	99	7.78e-15	70.9
MsG0380017361.01.T01	AT3G18590	42.045	88	46	3	12	97	12	96	1.19e-14	68.2
MsG0380017361.01.T01	AT4G32490	36.000	100	56	4	3	97	2	98	2.84e-14	67.8
MsG0380017361.01.T01	AT1G48940	38.202	89	50	3	11	97	10	95	5.03e-14	66.2
MsG0380017361.01.T01	AT5G53870	40.426	94	46	4	11	97	7	97	2.75e-13	66.2
MsG0380017361.01.T01	AT5G53870	41.304	92	44	4	11	95	7	95	2.89e-13	66.2
MsG0380017361.01.T01	AT1G64640	32.990	97	61	2	4	97	6	101	4.37e-13	63.9
MsG0380017361.01.T01	AT5G14345	48.333	60	29	1	39	98	28	85	4.44e-13	63.2

Find 41 sgRNAs with CRISPR-Local

Find 53 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGAATCACCGCACCTAATT+AGG	0.210319	3:-95329434	MsG0380017361.01.T01:CDS
AACTGGACTTGTGACTGTTC+TGG	0.274010	3:-95329487	MsG0380017361.01.T01:CDS
TTGTTCTTGTTCCTTCTCTT+TGG	0.278533	3:-95330029	MsG0380017361.01.T01:CDS
AACTTCACTATATCCTAATT+AGG	0.307719	3:+95329421	None:intergenic
CCCATCATTGTAATGTTCAA+TGG	0.374125	3:+95329709	None:intergenic
CCATCATTGTAATGTTCAAT+GGG	0.379061	3:+95329710	None:intergenic
ACTGGACTTGTGACTGTTCT+GGG	0.401738	3:-95329486	MsG0380017361.01.T01:CDS
CTCTGCAGCTAAGGAACTAT+TGG	0.408413	3:-95330003	MsG0380017361.01.T01:CDS
CCCATTGAACATTACAATGA+TGG	0.412359	3:-95329710	MsG0380017361.01.T01:CDS
TGTGACTGTTCTGGGACTGT+TGG	0.436449	3:-95329478	MsG0380017361.01.T01:CDS
TTCAAAGTCGGCGATCATCT+TGG	0.440071	3:-95329903	MsG0380017361.01.T01:intron
GGACCTTCTTCCAACTCTGC+TGG	0.465938	3:+95329546	None:intergenic
AGTGCGCCGGTGTTGCGAAC+TGG	0.466338	3:-95329504	MsG0380017361.01.T01:CDS
CTTTGGTTTCTCTGCAGCTA+AGG	0.473136	3:-95330012	MsG0380017361.01.T01:CDS
CTGCTAGTTGGTGCAACAGC+TGG	0.474292	3:+95329525	None:intergenic
AGTGAGTCTGCTTCAGATGA+TGG	0.493397	3:+95329951	None:intergenic
TGCACCATCTCCAGCAGAGT+TGG	0.499713	3:-95329556	MsG0380017361.01.T01:CDS
TCTTCCAACTCTGCTGGAGA+TGG	0.500018	3:+95329552	None:intergenic
AACTCTGCTGGAGATGGTGC+AGG	0.510903	3:+95329558	None:intergenic
TTTGCAGTTTGGAAATATGA+TGG	0.513645	3:-95329794	MsG0380017361.01.T01:intron
AGCAGACTCACTCAACCAAT+GGG	0.514967	3:-95329940	MsG0380017361.01.T01:CDS
AACACCGGCGCACTGCTAGT+TGG	0.529681	3:+95329513	None:intergenic
TCTCCAAAGAAAAGATCCAT+TGG	0.532263	3:-95329588	MsG0380017361.01.T01:intron
CCATTGAACATTACAATGAT+GGG	0.540182	3:-95329709	MsG0380017361.01.T01:CDS
AAGCAGACTCACTCAACCAA+TGG	0.548958	3:-95329941	MsG0380017361.01.T01:CDS
CAGTTTGGAAATATGATGGT+GGG	0.580211	3:-95329790	MsG0380017361.01.T01:CDS
TGCACCAACTAGCAGTGCGC+CGG	0.584450	3:-95329517	MsG0380017361.01.T01:CDS
GAAAAGTCTCGTTTCAAAGT+CGG	0.587560	3:-95329915	MsG0380017361.01.T01:CDS
TCTCCAGCAGAGTTGGAAGA+AGG	0.588093	3:-95329549	MsG0380017361.01.T01:CDS
ACAAGTCCAGTTCGCAACAC+CGG	0.589779	3:+95329498	None:intergenic
TGGTGCAGGTGAAACTCCAA+TGG	0.600203	3:+95329572	None:intergenic
GCAGTTTGGAAATATGATGG+TGG	0.604799	3:-95329791	MsG0380017361.01.T01:intron
CACTATATCCTAATTAGGTG+CGG	0.608986	3:+95329426	None:intergenic
AGGCAAGATAGATGCATGGA+AGG	0.615286	3:-95329976	MsG0380017361.01.T01:CDS
CTGCAGAGAAACCAAAGAGA+AGG	0.616684	3:+95330018	None:intergenic
CATCATTGTAATGTTCAATG+GGG	0.626069	3:+95329711	None:intergenic
GCAGCTAAGGAACTATTGGT+CGG	0.634929	3:-95329999	MsG0380017361.01.T01:CDS
AGTTCTTGAGAACACAGCCA+TGG	0.674329	3:+95330067	None:intergenic
TCGGAGGCAAGATAGATGCA+TGG	0.675253	3:-95329980	MsG0380017361.01.T01:CDS
GCTAAGGAACTATTGGTCGG+AGG	0.690687	3:-95329996	MsG0380017361.01.T01:CDS
TTACAATGATGGGAACACGA+AGG	0.756088	3:-95329699	MsG0380017361.01.T01:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATTTCCAAACTGCAAAACAA+AGG	+	Chr3:95329695-95329714	None:intergenic	30.0%
	CATCATTGTAATGTTCAATG+GGG	+	Chr3:95329785-95329804	None:intergenic	30.0%
	CCATCATTGTAATGTTCAAT+GGG	+	Chr3:95329786-95329805	None:intergenic	30.0%
	CCATTGAACATTACAATGAT+GGG	-	Chr3:95329784-95329803	MsG0380017361.01.T01:CDS	30.0%
	TTTGCAGTTTGGAAATATGA+TGG	-	Chr3:95329699-95329718	MsG0380017361.01.T01:intron	30.0%
!!!	TTTACCTTTGTTTTGCAGTT+TGG	-	Chr3:95329688-95329707	MsG0380017361.01.T01:intron	30.0%
	AGAAAAAGATGTGTCAGTGA+TGG	+	Chr3:95329669-95329688	None:intergenic	35.0%
	CAGTTTGGAAATATGATGGT+GGG	-	Chr3:95329703-95329722	MsG0380017361.01.T01:CDS	35.0%
	CCCATCATTGTAATGTTCAA+TGG	+	Chr3:95329787-95329806	None:intergenic	35.0%
	CCCATTGAACATTACAATGA+TGG	-	Chr3:95329783-95329802	MsG0380017361.01.T01:CDS	35.0%
	GAAAAGTCTCGTTTCAAAGT+CGG	-	Chr3:95329578-95329597	MsG0380017361.01.T01:CDS	35.0%
	TCTCCAAAGAAAAGATCCAT+TGG	-	Chr3:95329905-95329924	MsG0380017361.01.T01:CDS	35.0%
	TTGTTCTTGTTCCTTCTCTT+TGG	-	Chr3:95329464-95329483	MsG0380017361.01.T01:CDS	35.0%
!	ACTCCAATGGATCTTTTCTT+TGG	+	Chr3:95329911-95329930	None:intergenic	35.0%
	ATGAATCACCGCACCTAATT+AGG	-	Chr3:95330059-95330078	MsG0380017361.01.T01:CDS	40.0%
	CTGATGAAGTAAAATGGTCC+AGG	+	Chr3:95329834-95329853	None:intergenic	40.0%
	GCAGTTTGGAAATATGATGG+TGG	-	Chr3:95329702-95329721	MsG0380017361.01.T01:CDS	40.0%
	GCTCCACTGATGAAGTAAAA+TGG	+	Chr3:95329840-95329859	None:intergenic	40.0%
	TTACTTCATCAGTGGAGCAA+AGG	-	Chr3:95329842-95329861	MsG0380017361.01.T01:intron	40.0%
!	GGACCATTTTACTTCATCAG+TGG	-	Chr3:95329834-95329853	MsG0380017361.01.T01:intron	40.0%
!	TTACAATGATGGGAACACGA+AGG	-	Chr3:95329794-95329813	MsG0380017361.01.T01:intron	40.0%
	AACTGGACTTGTGACTGTTC+TGG	-	Chr3:95330006-95330025	MsG0380017361.01.T01:CDS	45.0%
	AAGCAGACTCACTCAACCAA+TGG	-	Chr3:95329552-95329571	MsG0380017361.01.T01:CDS	45.0%
	AAGGTAAAGCTAGACAGACC+TGG	-	Chr3:95329813-95329832	MsG0380017361.01.T01:intron	45.0%
	ACTGGACTTGTGACTGTTCT+GGG	-	Chr3:95330007-95330026	MsG0380017361.01.T01:CDS	45.0%
	AGCAGACTCACTCAACCAAT+GGG	-	Chr3:95329553-95329572	MsG0380017361.01.T01:CDS	45.0%
	AGGACAAAAGCTGATTGTGG+TGG	-	Chr3:95329877-95329896	MsG0380017361.01.T01:intron	45.0%
	AGGCAAGATAGATGCATGGA+AGG	-	Chr3:95329517-95329536	MsG0380017361.01.T01:CDS	45.0%
	AGTGAGTCTGCTTCAGATGA+TGG	+	Chr3:95329545-95329564	None:intergenic	45.0%
	CTCTGCAGCTAAGGAACTAT+TGG	-	Chr3:95329490-95329509	MsG0380017361.01.T01:CDS	45.0%
	CTGCAGAGAAACCAAAGAGA+AGG	+	Chr3:95329478-95329497	None:intergenic	45.0%
	GCAAGGACAAAAGCTGATTG+TGG	-	Chr3:95329874-95329893	MsG0380017361.01.T01:intron	45.0%
	GCAGCTAAGGAACTATTGGT+CGG	-	Chr3:95329494-95329513	MsG0380017361.01.T01:CDS	45.0%
	TTCAAAGTCGGCGATCATCT+TGG	-	Chr3:95329590-95329609	MsG0380017361.01.T01:intron	45.0%
!	AACGAGACTTTTCTGCCCAT+TGG	+	Chr3:95329571-95329590	None:intergenic	45.0%
!	CTTTGGTTTCTCTGCAGCTA+AGG	-	Chr3:95329481-95329500	MsG0380017361.01.T01:CDS	45.0%
!!!	GGGACTGTTGGCTTTTATGT+GGG	-	Chr3:95330027-95330046	MsG0380017361.01.T01:CDS	45.0%
!!!	TGGGACTGTTGGCTTTTATG+TGG	-	Chr3:95330026-95330045	MsG0380017361.01.T01:CDS	45.0%
	ACAAGTCCAGTTCGCAACAC+CGG	+	Chr3:95329998-95330017	None:intergenic	50.0%
	AGCAAAGGACACTGTGAGCA+AGG	-	Chr3:95329857-95329876	MsG0380017361.01.T01:intron	50.0%
	GCTAAGGAACTATTGGTCGG+AGG	-	Chr3:95329497-95329516	MsG0380017361.01.T01:CDS	50.0%
	TCGGAGGCAAGATAGATGCA+TGG	-	Chr3:95329513-95329532	MsG0380017361.01.T01:CDS	50.0%
	TCTCCAGCAGAGTTGGAAGA+AGG	-	Chr3:95329944-95329963	MsG0380017361.01.T01:CDS	50.0%
	TCTTCCAACTCTGCTGGAGA+TGG	+	Chr3:95329944-95329963	None:intergenic	50.0%
	TGGTGCAGGTGAAACTCCAA+TGG	+	Chr3:95329924-95329943	None:intergenic	50.0%
!!	TGTGACTGTTCTGGGACTGT+TGG	-	Chr3:95330015-95330034	MsG0380017361.01.T01:CDS	50.0%
	AACTCTGCTGGAGATGGTGC+AGG	+	Chr3:95329938-95329957	None:intergenic	55.0%
	GGACCTTCTTCCAACTCTGC+TGG	+	Chr3:95329950-95329969	None:intergenic	55.0%
	TGCACCATCTCCAGCAGAGT+TGG	-	Chr3:95329937-95329956	MsG0380017361.01.T01:CDS	55.0%
!	CTGCTAGTTGGTGCAACAGC+TGG	+	Chr3:95329971-95329990	None:intergenic	55.0%
	AACACCGGCGCACTGCTAGT+TGG	+	Chr3:95329983-95330002	None:intergenic	60.0%
	TGCACCAACTAGCAGTGCGC+CGG	-	Chr3:95329976-95329995	MsG0380017361.01.T01:CDS	60.0%
!!	AGTGCGCCGGTGTTGCGAAC+TGG	-	Chr3:95329989-95330008	MsG0380017361.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	95329428	95330087	95329428	ID=MsG0380017361.01;Name=MsG0380017361.01
Chr3	mRNA	95329428	95330087	95329428	ID=MsG0380017361.01.T01;Parent=MsG0380017361.01;Name=MsG0380017361.01.T01;_AED=0.50;_eAED=0.53;_QI=0\|0\|0\|1\|1\|1\|3\|0\|155
Chr3	exon	95329904	95330087	95329904	ID=MsG0380017361.01.T01:exon:1652;Parent=MsG0380017361.01.T01
Chr3	exon	95329700	95329809	95329700	ID=MsG0380017361.01.T01:exon:1651;Parent=MsG0380017361.01.T01
Chr3	exon	95329428	95329601	95329428	ID=MsG0380017361.01.T01:exon:1650;Parent=MsG0380017361.01.T01
Chr3	CDS	95329904	95330087	95329904	ID=MsG0380017361.01.T01:cds;Parent=MsG0380017361.01.T01
Chr3	CDS	95329700	95329809	95329700	ID=MsG0380017361.01.T01:cds;Parent=MsG0380017361.01.T01
Chr3	CDS	95329428	95329601	95329428	ID=MsG0380017361.01.T01:cds;Parent=MsG0380017361.01.T01

Gene Sequence

>MsG0380017361.01.T01

ATGGCTGTGTTCTCAAGAACTGCTTCTGCTTCTCTATTGTTCTTGTTCCTTCTCTTTGGTTTCTCTGCAGCTAAGGAACTATTGGTCGGAGGCAAGATAGATGCATGGAAGGTTCCATCATCTGAAGCAGACTCACTCAACCAATGGGCAGAAAAGTCTCGTTTCAAAGTCGGCGATCATCTTGTTTGGAAATATGATGGTGGGAAAGACTCAGTTTTGCAAGTAAACAAAGAAGATTATGCTAATTGCAACAGCTCAAACCCCATTGAACATTACAATGATGGGAACACGAAGAAAAGATCCATTGGAGTTTCACCTGCACCATCTCCAGCAGAGTTGGAAGAAGGTCCAGCTGTTGCACCAACTAGCAGTGCGCCGGTGTTGCGAACTGGACTTGTGACTGTTCTGGGACTGTTGGCTTTTATGTGGGTTTTCTCATATGAATCACCGCACCTAATTAGGATATAG

Protein sequence

>MsG0380017361.01.T01

MAVFSRTASASLLFLFLLFGFSAAKELLVGGKIDAWKVPSSEADSLNQWAEKSRFKVGDHLVWKYDGGKDSVLQVNKEDYANCNSSNPIEHYNDGNTKKRSIGVSPAPSPAELEEGPAVAPTSSAPVLRTGLVTVLGLLAFMWVFSYESPHLIRI*