Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080049140.01.T01 | AFK38628.1 | 94.118 | 187 | 8 | 1 | 1 | 187 | 1 | 184 | 3.36E-112 | 327 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080049140.01.T01 | Q9SK27 | 50.286 | 175 | 75 | 5 | 11 | 184 | 15 | 178 | 6.60E-54 | 172 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080049140.01.T01 | I3SED6 | 94.118 | 187 | 8 | 1 | 1 | 187 | 1 | 184 | 1.60e-112 | 327 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047814.01 | MsG0080049140.01 | 0.816336 | 5.827910e-52 | 4.118304e-49 |
MsG0080047974.01 | MsG0080049140.01 | 0.858001 | 1.111176e-62 | 2.794928e-59 |
MsG0080048291.01 | MsG0080049140.01 | 0.831324 | 1.780447e-55 | 1.925562e-52 |
MsG0080048311.01 | MsG0080049140.01 | 0.849416 | 3.278527e-60 | 6.210524e-57 |
MsG0080048701.01 | MsG0080049140.01 | 0.813724 | 2.214714e-51 | 1.457571e-48 |
MsG0080048781.01 | MsG0080049140.01 | 0.868926 | 4.538825e-66 | 1.671398e-62 |
MsG0080049140.01 | MsG0180000111.01 | 0.832805 | 7.665270e-56 | 8.661486e-53 |
MsG0080049140.01 | MsG0180000314.01 | 0.864889 | 8.785405e-65 | 2.802098e-61 |
MsG0080049140.01 | MsG0180000348.01 | 0.836198 | 1.076965e-56 | 1.347744e-53 |
MsG0080049140.01 | MsG0180000353.01 | 0.831343 | 1.761936e-55 | 1.906626e-52 |
MsG0080049140.01 | MsG0180000373.01 | 0.847500 | 1.111747e-59 | 1.980017e-56 |
MsG0080049140.01 | MsG0180000557.01 | 0.800507 | 1.395273e-48 | 6.508002e-46 |
MsG0080049140.01 | MsG0180000983.01 | 0.853565 | 2.197038e-61 | 4.767352e-58 |
MsG0080049140.01 | MsG0180002421.01 | 0.878666 | 2.334884e-69 | 1.229774e-65 |
MsG0080049140.01 | MsG0180003361.01 | 0.820772 | 5.747124e-53 | 4.589815e-50 |
MsG0080049140.01 | MsG0180003427.01 | 0.875590 | 2.732454e-68 | 1.283084e-64 |
MsG0080049140.01 | MsG0180003485.01 | 0.844861 | 5.817255e-59 | 9.517178e-56 |
MsG0080049140.01 | MsG0180003796.01 | 0.880608 | 4.772691e-70 | 2.708692e-66 |
MsG0080049140.01 | MsG0180003920.01 | 0.836426 | 9.423822e-57 | 1.187212e-53 |
MsG0080049140.01 | MsG0180003943.01 | 0.827662 | 1.382131e-54 | 1.342990e-51 |
MsG0080049140.01 | MsG0180003994.01 | 0.834606 | 2.719071e-56 | 3.243146e-53 |
MsG0080049140.01 | MsG0180004049.01 | 0.850084 | 2.133408e-60 | 4.131025e-57 |
MsG0080049140.01 | MsG0180004099.01 | 0.875322 | 3.375893e-68 | 1.569398e-64 |
MsG0080049140.01 | MsG0180004126.01 | 0.830971 | 2.174517e-55 | 2.327271e-52 |
MsG0080049140.01 | MsG0180004661.01 | 0.857780 | 1.292987e-62 | 3.227613e-59 |
MsG0080049140.01 | MsG0180004711.01 | 0.831829 | 1.337423e-55 | 1.468419e-52 |
MsG0080049140.01 | MsG0180004754.01 | 0.841045 | 6.029505e-58 | 8.751099e-55 |
MsG0080049140.01 | MsG0180004790.01 | 0.800517 | 1.388524e-48 | 6.478363e-46 |
MsG0080049140.01 | MsG0180004806.01 | 0.835180 | 1.949265e-56 | 2.365266e-53 |
MsG0080049140.01 | MsG0180004958.01 | 0.838911 | 2.169860e-57 | 2.948350e-54 |
MsG0080049140.01 | MsG0180004970.01 | 0.839435 | 1.587239e-57 | 2.191856e-54 |
MsG0080049140.01 | MsG0180004995.01 | 0.805665 | 1.196087e-49 | 6.365011e-47 |
MsG0080049140.01 | MsG0180005002.01 | 0.834550 | 2.809447e-56 | 3.345395e-53 |
MsG0080049140.01 | MsG0180005435.01 | 0.843165 | 1.657445e-58 | 2.570683e-55 |
MsG0080049140.01 | MsG0180005835.01 | 0.837777 | 4.254660e-57 | 5.585401e-54 |
MsG0080049140.01 | MsG0180006000.01 | 0.844805 | 6.019768e-59 | 9.832168e-56 |
MsG0080049140.01 | MsG0180006133.01 | 0.822209 | 2.677055e-53 | 2.226112e-50 |
MsG0080049140.01 | MsG0280006311.01 | 0.867820 | 1.032033e-65 | 3.651889e-62 |
MsG0080049140.01 | MsG0280006477.01 | 0.872831 | 2.349425e-67 | 9.973236e-64 |
MsG0080049140.01 | MsG0280006540.01 | 0.870501 | 1.391369e-66 | 5.424743e-63 |
MsG0080049140.01 | MsG0280006563.01 | 0.838090 | 3.534696e-57 | 4.684087e-54 |
MsG0080049140.01 | MsG0280006591.01 | 0.805990 | 1.021984e-49 | 5.484288e-47 |
MsG0080049140.01 | MsG0280007359.01 | 0.867022 | 1.857959e-65 | 6.391031e-62 |
MsG0080049140.01 | MsG0280007761.01 | 0.862050 | 6.668817e-64 | 1.926589e-60 |
MsG0080049140.01 | MsG0280008280.01 | 0.867405 | 1.402346e-65 | 4.891149e-62 |
MsG0080049140.01 | MsG0280008679.01 | 0.853661 | 2.062165e-61 | 4.488790e-58 |
MsG0080049140.01 | MsG0280009118.01 | 0.811174 | 7.988893e-51 | 4.910786e-48 |
MsG0080049140.01 | MsG0280009493.01 | 0.850835 | 1.313073e-60 | 2.605958e-57 |
MsG0080049140.01 | MsG0280009514.01 | 0.825418 | 4.739909e-54 | 4.317722e-51 |
MsG0080049140.01 | MsG0280009752.01 | 0.851255 | 9.995702e-61 | 2.011257e-57 |
MsG0080049140.01 | MsG0280009794.01 | 0.831473 | 1.636049e-55 | 1.777377e-52 |
MsG0080049140.01 | MsG0280010579.01 | 0.808528 | 2.962811e-50 | 1.698081e-47 |
MsG0080049140.01 | MsG0280010779.01 | 0.885747 | 6.226255e-72 | 4.325828e-68 |
MsG0080049140.01 | MsG0280010795.01 | 0.835060 | 2.090681e-56 | 2.527555e-53 |
MsG0080049140.01 | MsG0280010868.01 | 0.805536 | 1.273348e-49 | 6.753457e-47 |
MsG0080049140.01 | MsG0280010907.01 | 0.802654 | 5.064267e-49 | 2.494320e-46 |
MsG0080049140.01 | MsG0280010977.01 | 0.838408 | 2.926765e-57 | 3.916576e-54 |
MsG0080049140.01 | MsG0280011003.01 | 0.820055 | 8.394329e-53 | 6.572422e-50 |
MsG0080049140.01 | MsG0280011013.01 | 0.818285 | 2.123482e-52 | 1.582745e-49 |
MsG0080049140.01 | MsG0280011014.01 | 0.856870 | 2.401392e-62 | 5.813508e-59 |
MsG0080049140.01 | MsG0280011034.01 | 0.802761 | 4.812279e-49 | 2.376831e-46 |
MsG0080049140.01 | MsG0280011154.01 | 0.890687 | 7.864534e-74 | 6.682907e-70 |
MsG0080049140.01 | MsG0280011258.01 | 0.811577 | 6.529234e-51 | 4.056445e-48 |
MsG0080049140.01 | MsG0280011282.01 | 0.856251 | 3.650454e-62 | 8.658096e-59 |
MsG0080049140.01 | MsG0380012146.01 | 0.808769 | 2.631932e-50 | 1.517860e-47 |
MsG0080049140.01 | MsG0380012471.01 | 0.843400 | 1.433955e-58 | 2.241163e-55 |
MsG0080049140.01 | MsG0380012522.01 | 0.801756 | 7.748345e-49 | 3.730026e-46 |
MsG0080049140.01 | MsG0380012788.01 | 0.819419 | 1.173188e-52 | 9.023254e-50 |
MsG0080049140.01 | MsG0380012808.01 | 0.808209 | 3.466035e-50 | 1.969992e-47 |
MsG0080049140.01 | MsG0380013636.01 | 0.818695 | 1.713972e-52 | 1.292068e-49 |
MsG0080049140.01 | MsG0380014132.01 | 0.820975 | 5.161572e-53 | 4.145935e-50 |
MsG0080049140.01 | MsG0380014289.01 | 0.846735 | 1.802084e-59 | 3.131823e-56 |
MsG0080049140.01 | MsG0380014387.01 | 0.845837 | 3.166184e-59 | 5.345479e-56 |
MsG0080049140.01 | MsG0380014594.01 | 0.804327 | 2.278442e-49 | 1.171406e-46 |
MsG0080049140.01 | MsG0380014754.01 | 0.825623 | 4.237472e-54 | 3.882800e-51 |
MsG0080049140.01 | MsG0380014808.01 | 0.867592 | 1.221159e-65 | 4.287087e-62 |
MsG0080049140.01 | MsG0380015058.01 | 0.815656 | 8.268689e-52 | 5.735183e-49 |
MsG0080049140.01 | MsG0380015189.01 | 0.808048 | 3.749709e-50 | 2.122064e-47 |
MsG0080049140.01 | MsG0380015190.01 | 0.811144 | 8.110627e-51 | 4.981666e-48 |
MsG0080049140.01 | MsG0380015234.01 | 0.821688 | 3.533812e-53 | 2.895298e-50 |
MsG0080049140.01 | MsG0380015249.01 | 0.804239 | 2.376113e-49 | 1.218834e-46 |
MsG0080049140.01 | MsG0380015350.01 | 0.823783 | 1.150248e-53 | 1.000218e-50 |
MsG0080049140.01 | MsG0380015548.01 | 0.913572 | 5.270073e-84 | 1.255076e-79 |
MsG0080049140.01 | MsG0380015805.01 | 0.827391 | 1.605608e-54 | 1.548150e-51 |
MsG0080049140.01 | MsG0380015816.01 | 0.845131 | 4.918220e-59 | 8.114800e-56 |
MsG0080049140.01 | MsG0380016140.01 | 0.826984 | 2.009354e-54 | 1.914311e-51 |
MsG0080049140.01 | MsG0380016199.01 | 0.809266 | 2.060148e-50 | 1.204043e-47 |
MsG0080049140.01 | MsG0380016225.01 | 0.834044 | 3.763821e-56 | 4.414042e-53 |
MsG0080049140.01 | MsG0380016703.01 | 0.887714 | 1.119855e-72 | 8.422856e-69 |
MsG0080049140.01 | MsG0380016994.01 | 0.862001 | 6.901558e-64 | 1.990281e-60 |
MsG0080049140.01 | MsG0380017159.01 | 0.862155 | 6.188780e-64 | 1.794657e-60 |
MsG0080049140.01 | MsG0380017164.01 | 0.859655 | 3.560035e-63 | 9.472593e-60 |
MsG0080049140.01 | MsG0380017239.01 | 0.812830 | 3.480556e-51 | 2.235757e-48 |
MsG0080049140.01 | MsG0380017240.01 | 0.807179 | 5.735340e-50 | 3.173066e-47 |
MsG0080049140.01 | MsG0380017361.01 | 0.850652 | 1.478407e-60 | 2.916359e-57 |
MsG0080049140.01 | MsG0380017869.01 | 0.801030 | 1.091007e-48 | 5.157323e-46 |
MsG0080049140.01 | MsG0380018029.01 | 0.800022 | 1.751372e-48 | 8.069089e-46 |
MsG0080049140.01 | MsG0480018230.01 | 0.813924 | 2.000648e-51 | 1.323795e-48 |
MsG0080049140.01 | MsG0480018397.01 | 0.913528 | 5.543334e-84 | 1.316970e-79 |
MsG0080049140.01 | MsG0480018526.01 | 0.864556 | 1.117019e-64 | 3.521434e-61 |
MsG0080049140.01 | MsG0480018885.01 | 0.802274 | 6.063316e-49 | 2.957775e-46 |
MsG0080049140.01 | MsG0480018918.01 | 0.839547 | 1.484125e-57 | 2.056247e-54 |
MsG0080049140.01 | MsG0480018919.01 | 0.884976 | 1.209464e-71 | 8.152323e-68 |
MsG0080049140.01 | MsG0480019276.01 | 0.805237 | 1.470882e-49 | 7.741613e-47 |
MsG0080049140.01 | MsG0480019635.01 | 0.863358 | 2.634864e-64 | 7.966047e-61 |
MsG0080049140.01 | MsG0480019699.01 | 0.810024 | 1.416038e-50 | 8.443867e-48 |
MsG0080049140.01 | MsG0480019710.01 | 0.817107 | 3.913524e-52 | 2.824300e-49 |
MsG0080049140.01 | MsG0480019922.01 | 0.858478 | 8.012527e-63 | 2.047834e-59 |
MsG0080049140.01 | MsG0480020463.01 | 0.819147 | 1.352716e-52 | 1.032533e-49 |
MsG0080049140.01 | MsG0480020495.01 | 0.850349 | 1.798616e-60 | 3.512737e-57 |
MsG0080049140.01 | MsG0480020847.01 | 0.839430 | 1.592515e-57 | 2.198777e-54 |
MsG0080049140.01 | MsG0480020965.01 | 0.850237 | 1.933277e-60 | 3.762460e-57 |
MsG0080049140.01 | MsG0480021013.01 | 0.862802 | 3.915502e-64 | 1.161545e-60 |
MsG0080049140.01 | MsG0480021156.01 | 0.802210 | 6.250849e-49 | 3.044184e-46 |
MsG0080049140.01 | MsG0480021901.01 | 0.815871 | 7.403441e-52 | 5.165050e-49 |
MsG0080049140.01 | MsG0480022313.01 | 0.818157 | 2.269101e-52 | 1.685386e-49 |
MsG0080049140.01 | MsG0480022325.01 | 0.871251 | 7.880918e-67 | 3.157474e-63 |
MsG0080049140.01 | MsG0480022331.01 | 0.864854 | 9.012218e-65 | 2.870897e-61 |
MsG0080049140.01 | MsG0480022549.01 | 0.806082 | 9.777809e-50 | 5.259171e-47 |
MsG0080049140.01 | MsG0480022620.01 | 0.846016 | 2.830608e-59 | 4.806283e-56 |
MsG0080049140.01 | MsG0480022866.01 | 0.812323 | 4.491097e-51 | 2.846783e-48 |
MsG0080049140.01 | MsG0480022982.01 | 0.846953 | 1.570726e-59 | 2.748819e-56 |
MsG0080049140.01 | MsG0480022998.01 | 0.824581 | 7.471378e-54 | 6.645700e-51 |
MsG0080049140.01 | MsG0480023130.01 | 0.803292 | 3.736565e-49 | 1.870655e-46 |
MsG0080049140.01 | MsG0480023194.01 | 0.800010 | 1.761611e-48 | 8.113671e-46 |
MsG0080049140.01 | MsG0480023262.01 | 0.902306 | 1.109267e-78 | 1.560659e-74 |
MsG0080049140.01 | MsG0480023296.01 | 0.875546 | 2.830898e-68 | 1.327120e-64 |
MsG0080049140.01 | MsG0480023341.01 | 0.829703 | 4.436888e-55 | 4.576789e-52 |
MsG0080049140.01 | MsG0480023458.01 | 0.849400 | 3.313064e-60 | 6.272784e-57 |
MsG0080049140.01 | MsG0480023620.01 | 0.820869 | 5.459751e-53 | 4.372310e-50 |
MsG0080049140.01 | MsG0480023653.01 | 0.819447 | 1.155846e-52 | 8.897012e-50 |
MsG0080049140.01 | MsG0480023672.01 | 0.891462 | 3.886812e-74 | 3.411215e-70 |
MsG0080049140.01 | MsG0480023762.01 | 0.806490 | 8.019981e-50 | 4.358837e-47 |
MsG0080049140.01 | MsG0480023832.01 | 0.857679 | 1.384902e-62 | 3.446012e-59 |
MsG0080049140.01 | MsG0580024109.01 | 0.821191 | 4.603732e-53 | 3.719960e-50 |
MsG0080049140.01 | MsG0580024129.01 | 0.837970 | 3.796020e-57 | 5.012663e-54 |
MsG0080049140.01 | MsG0580024330.01 | 0.841615 | 4.268184e-58 | 6.306504e-55 |
MsG0080049140.01 | MsG0580024358.01 | 0.804471 | 2.125714e-49 | 1.096938e-46 |
MsG0080049140.01 | MsG0580024380.01 | 0.800746 | 1.247234e-48 | 5.852908e-46 |
MsG0080049140.01 | MsG0580024388.01 | 0.830978 | 2.165765e-55 | 2.318412e-52 |
MsG0080049140.01 | MsG0580024489.01 | 0.932809 | 4.868710e-95 | 3.335230e-90 |
MsG0080049140.01 | MsG0580024657.01 | 0.814272 | 1.676134e-51 | 1.119650e-48 |
MsG0080049140.01 | MsG0580024722.01 | 0.820520 | 6.567391e-53 | 5.208011e-50 |
MsG0080049140.01 | MsG0580024748.01 | 0.821402 | 4.116053e-53 | 3.345252e-50 |
MsG0080049140.01 | MsG0580024758.01 | 0.870431 | 1.466722e-66 | 5.704139e-63 |
MsG0080049140.01 | MsG0580024787.01 | 0.806562 | 7.744235e-50 | 4.216723e-47 |
MsG0080049140.01 | MsG0580024813.01 | 0.805501 | 1.294600e-49 | 6.860148e-47 |
MsG0080049140.01 | MsG0580024954.01 | 0.841704 | 4.043923e-58 | 5.990822e-55 |
MsG0080049140.01 | MsG0580025093.01 | 0.811319 | 7.431431e-51 | 4.585444e-48 |
MsG0080049140.01 | MsG0580025203.01 | 0.805281 | 1.439824e-49 | 7.586490e-47 |
MsG0080049140.01 | MsG0580025506.01 | 0.814283 | 1.666690e-51 | 1.113675e-48 |
MsG0080049140.01 | MsG0580025614.01 | 0.848044 | 7.874673e-60 | 1.426711e-56 |
MsG0080049140.01 | MsG0580025740.01 | 0.809660 | 1.695458e-50 | 1.001391e-47 |
MsG0080049140.01 | MsG0580025766.01 | 0.883464 | 4.387767e-71 | 2.784683e-67 |
MsG0080049140.01 | MsG0580026059.01 | 0.837475 | 5.087085e-57 | 6.615676e-54 |
MsG0080049140.01 | MsG0580026089.01 | 0.819552 | 1.093969e-52 | 8.445107e-50 |
MsG0080049140.01 | MsG0580026142.01 | 0.809050 | 2.291672e-50 | 1.331629e-47 |
MsG0080049140.01 | MsG0580026186.01 | 0.813171 | 2.928893e-51 | 1.898740e-48 |
MsG0080049140.01 | MsG0580026593.01 | 0.846021 | 2.820872e-59 | 4.790698e-56 |
MsG0080049140.01 | MsG0580026610.01 | 0.809721 | 1.644848e-50 | 9.730650e-48 |
MsG0080049140.01 | MsG0580027431.01 | 0.806718 | 7.178370e-50 | 3.924245e-47 |
MsG0080049140.01 | MsG0580028060.01 | 0.823539 | 1.312098e-53 | 1.132930e-50 |
MsG0080049140.01 | MsG0580028176.01 | 0.802118 | 6.529399e-49 | 3.172340e-46 |
MsG0080049140.01 | MsG0580028756.01 | 0.906323 | 1.677147e-80 | 2.825981e-76 |
MsG0080049140.01 | MsG0580029261.01 | 0.839610 | 1.429944e-57 | 1.985111e-54 |
MsG0080049140.01 | MsG0580029270.01 | 0.812149 | 4.903475e-51 | 3.093539e-48 |
MsG0080049140.01 | MsG0580029298.01 | 0.878420 | 2.849520e-69 | 1.487109e-65 |
MsG0080049140.01 | MsG0580029591.01 | 0.849425 | 3.259784e-60 | 6.176722e-57 |
MsG0080049140.01 | MsG0580029640.01 | 0.840601 | 7.880506e-58 | 1.128156e-54 |
MsG0080049140.01 | MsG0580029712.01 | 0.802679 | 5.004144e-49 | 2.466323e-46 |
MsG0080049140.01 | MsG0580029825.01 | 0.829035 | 6.447198e-55 | 6.520219e-52 |
MsG0080049140.01 | MsG0680030763.01 | 0.826800 | 2.224097e-54 | 2.107423e-51 |
MsG0080049140.01 | MsG0680030949.01 | 0.841792 | 3.833218e-58 | 5.694547e-55 |
MsG0080049140.01 | MsG0680031353.01 | 0.803012 | 4.271561e-49 | 2.123072e-46 |
MsG0080049140.01 | MsG0680031384.01 | 0.831723 | 1.420022e-55 | 1.554289e-52 |
MsG0080049140.01 | MsG0680031386.01 | 0.822430 | 2.379034e-53 | 1.990897e-50 |
MsG0080049140.01 | MsG0680031616.01 | 0.825727 | 4.003843e-54 | 3.679646e-51 |
MsG0080049140.01 | MsG0680031701.01 | 0.824150 | 9.433583e-54 | 8.287706e-51 |
MsG0080049140.01 | MsG0680032773.01 | 0.831130 | 1.986807e-55 | 2.136452e-52 |
MsG0080049140.01 | MsG0680033696.01 | 0.800435 | 1.443280e-48 | 6.719885e-46 |
MsG0080049140.01 | MsG0680034598.01 | 0.864494 | 1.168222e-64 | 3.674831e-61 |
MsG0080049140.01 | MsG0680034853.01 | 0.826929 | 2.071718e-54 | 1.970594e-51 |
MsG0080049140.01 | MsG0680035878.01 | 0.816844 | 4.483734e-52 | 3.212671e-49 |
MsG0080049140.01 | MsG0780036147.01 | 0.810243 | 1.270171e-50 | 7.617026e-48 |
MsG0080049140.01 | MsG0780036752.01 | 0.854945 | 8.776186e-62 | 1.993123e-58 |
MsG0080049140.01 | MsG0780036815.01 | 0.835074 | 2.072958e-56 | 2.507101e-53 |
MsG0080049140.01 | MsG0780036823.01 | 0.805069 | 1.594522e-49 | 8.356541e-47 |
MsG0080049140.01 | MsG0780038373.01 | 0.835010 | 2.151490e-56 | 2.597372e-53 |
MsG0080049140.01 | MsG0780038424.01 | 0.835132 | 2.004928e-56 | 2.429071e-53 |
MsG0080049140.01 | MsG0780039137.01 | 0.845124 | 4.937190e-59 | 8.144716e-56 |
MsG0080049140.01 | MsG0780039578.01 | 0.826408 | 2.757113e-54 | 2.583601e-51 |
MsG0080049140.01 | MsG0780039861.01 | 0.878452 | 2.777321e-69 | 1.451134e-65 |
MsG0080049140.01 | MsG0780040307.01 | 0.874972 | 4.446194e-68 | 2.041624e-64 |
MsG0080049140.01 | MsG0780040364.01 | 0.851486 | 8.601236e-61 | 1.743507e-57 |
MsG0080049140.01 | MsG0780040482.01 | 0.810564 | 1.082435e-50 | 6.546719e-48 |
MsG0080049140.01 | MsG0780040509.01 | 0.817627 | 2.990063e-52 | 2.188773e-49 |
MsG0080049140.01 | MsG0780040512.01 | 0.804836 | 1.784085e-49 | 9.294407e-47 |
MsG0080049140.01 | MsG0780040533.01 | 0.821568 | 3.768433e-53 | 3.076984e-50 |
MsG0080049140.01 | MsG0780040543.01 | 0.826403 | 2.765755e-54 | 2.591227e-51 |
MsG0080049140.01 | MsG0780040620.01 | 0.852005 | 6.129697e-61 | 1.263117e-57 |
MsG0080049140.01 | MsG0780040683.01 | 0.800073 | 1.710430e-48 | 7.890659e-46 |
MsG0080049140.01 | MsG0780040841.01 | 0.833444 | 5.315649e-56 | 6.122913e-53 |
MsG0080049140.01 | MsG0780040896.01 | 0.868153 | 8.065962e-66 | 2.888252e-62 |
MsG0080049140.01 | MsG0780041063.01 | 0.913847 | 3.826818e-84 | 9.231340e-80 |
MsG0080049140.01 | MsG0780041132.01 | 0.881549 | 2.188006e-70 | 1.287657e-66 |
MsG0080049140.01 | MsG0780041141.01 | 0.817213 | 3.705562e-52 | 2.682008e-49 |
MsG0080049140.01 | MsG0780041143.01 | 0.876306 | 1.550767e-68 | 7.481226e-65 |
MsG0080049140.01 | MsG0780041340.01 | 0.829033 | 6.454317e-55 | 6.527127e-52 |
MsG0080049140.01 | MsG0780041535.01 | 0.845246 | 4.576296e-59 | 7.579784e-56 |
MsG0080049140.01 | MsG0780041579.01 | 0.816710 | 4.804913e-52 | 3.430083e-49 |
MsG0080049140.01 | MsG0780041592.01 | 0.813625 | 2.327903e-51 | 1.527982e-48 |
MsG0080049140.01 | MsG0780041735.01 | 0.805215 | 1.486320e-49 | 7.818493e-47 |
MsG0080049140.01 | MsG0780041756.01 | 0.813261 | 2.799977e-51 | 1.819603e-48 |
MsG0080049140.01 | MsG0880041860.01 | 0.833399 | 5.453286e-56 | 6.272959e-53 |
MsG0080049140.01 | MsG0880041896.01 | 0.804169 | 2.457585e-49 | 1.258402e-46 |
MsG0080049140.01 | MsG0880042773.01 | 0.842287 | 2.834673e-58 | 4.277705e-55 |
MsG0080049140.01 | MsG0880042779.01 | 0.800419 | 1.454058e-48 | 6.767532e-46 |
MsG0080049140.01 | MsG0880042791.01 | 0.805708 | 1.171415e-49 | 6.241086e-47 |
MsG0080049140.01 | MsG0880042906.01 | 0.806475 | 8.080827e-50 | 4.390233e-47 |
MsG0080049140.01 | MsG0880042929.01 | 0.824719 | 6.929306e-54 | 6.188439e-51 |
MsG0080049140.01 | MsG0880042961.01 | 0.827233 | 1.751384e-54 | 1.680777e-51 |
MsG0080049140.01 | MsG0880042964.01 | 0.813432 | 2.567570e-51 | 1.676480e-48 |
MsG0080049140.01 | MsG0880043034.01 | 0.841638 | 4.209705e-58 | 6.224237e-55 |
MsG0080049140.01 | MsG0880043516.01 | 0.878100 | 3.689605e-69 | 1.901794e-65 |
MsG0080049140.01 | MsG0880043614.01 | 0.828917 | 6.884646e-55 | 6.938767e-52 |
MsG0080049140.01 | MsG0880043637.01 | 0.842149 | 3.084661e-58 | 4.634562e-55 |
MsG0080049140.01 | MsG0880044782.01 | 0.822633 | 2.133950e-53 | 1.796226e-50 |
MsG0080049140.01 | MsG0880045552.01 | 0.889719 | 1.882423e-73 | 1.536467e-69 |
MsG0080049140.01 | MsG0880045612.01 | 0.802047 | 6.750836e-49 | 3.274161e-46 |
MsG0080049140.01 | MsG0880045785.01 | 0.811778 | 5.904213e-51 | 3.687726e-48 |
MsG0080049140.01 | MsG0880045890.01 | 0.846125 | 2.643645e-59 | 4.504024e-56 |
MsG0080049140.01 | MsG0880046165.01 | 0.803780 | 2.960564e-49 | 1.500881e-46 |
MsG0080049140.01 | MsG0880046208.01 | 0.848878 | 4.627665e-60 | 8.615227e-57 |
MsG0080049140.01 | MsG0880046885.01 | 0.837210 | 5.946631e-57 | 7.670020e-54 |
MsG0080049140.01 | MsG0880046922.01 | 0.814065 | 1.862297e-51 | 1.237050e-48 |
MsG0080049140.01 | MsG0880046991.01 | 0.800391 | 1.473088e-48 | 6.851073e-46 |
MsG0080049140.01 | MsG0880047059.01 | 0.819229 | 1.295787e-52 | 9.913497e-50 |
MsG0080049140.01 | MsG0880047226.01 | 0.859381 | 4.303442e-63 | 1.134454e-59 |
MsG0080049140.01 | MsG0880047431.01 | 0.820697 | 5.981657e-53 | 4.766940e-50 |
MsG0080049140.01 | MsG0880047666.01 | 0.850885 | 1.271202e-60 | 2.526784e-57 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0880046648.01 | MsG0080049140.01 | PPI |
MsG0080048266.01 | MsG0080049140.01 | PPI |
MsG0880046591.01 | MsG0080049140.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080049140.01.T01 | MTR_1g014120 | 94.652 | 187 | 7 | 1 | 1 | 187 | 1 | 184 | 1.70e-108 | 308 |
MsG0080049140.01.T01 | MTR_3g105930 | 64.474 | 152 | 47 | 3 | 25 | 176 | 24 | 168 | 7.48e-64 | 195 |
MsG0080049140.01.T01 | MTR_7g090170 | 56.757 | 148 | 40 | 4 | 25 | 172 | 24 | 147 | 1.24e-49 | 157 |
MsG0080049140.01.T01 | MTR_8g463180 | 46.281 | 121 | 62 | 2 | 12 | 132 | 8 | 125 | 1.57e-35 | 126 |
MsG0080049140.01.T01 | MTR_2g079030 | 42.763 | 152 | 83 | 3 | 10 | 161 | 8 | 155 | 1.23e-34 | 128 |
MsG0080049140.01.T01 | MTR_4g081100 | 49.541 | 109 | 54 | 1 | 24 | 132 | 28 | 135 | 3.80e-34 | 120 |
MsG0080049140.01.T01 | MTR_6g022170 | 48.182 | 110 | 54 | 2 | 21 | 129 | 26 | 133 | 1.69e-31 | 112 |
MsG0080049140.01.T01 | MTR_2g090580 | 38.286 | 175 | 88 | 4 | 30 | 187 | 29 | 200 | 2.00e-29 | 108 |
MsG0080049140.01.T01 | MTR_4g078410 | 44.615 | 130 | 68 | 3 | 25 | 153 | 22 | 148 | 2.60e-29 | 107 |
MsG0080049140.01.T01 | MTR_2g090575 | 41.818 | 165 | 77 | 7 | 11 | 163 | 11 | 168 | 2.85e-29 | 111 |
MsG0080049140.01.T01 | MTR_2g101300 | 39.726 | 146 | 75 | 6 | 19 | 162 | 18 | 152 | 4.10e-28 | 104 |
MsG0080049140.01.T01 | MTR_4g111640 | 41.176 | 119 | 61 | 4 | 16 | 132 | 24 | 135 | 8.62e-27 | 100 |
MsG0080049140.01.T01 | MTR_4g124280 | 45.455 | 99 | 54 | 0 | 32 | 130 | 28 | 126 | 9.38e-27 | 102 |
MsG0080049140.01.T01 | MTR_4g077787 | 36.913 | 149 | 81 | 5 | 1 | 143 | 1 | 142 | 1.33e-26 | 100 |
MsG0080049140.01.T01 | MTR_2g083250 | 41.818 | 110 | 61 | 3 | 25 | 132 | 23 | 131 | 6.98e-26 | 100 |
MsG0080049140.01.T01 | MTR_8g086360 | 36.813 | 182 | 102 | 5 | 7 | 178 | 3 | 181 | 1.17e-25 | 98.2 |
MsG0080049140.01.T01 | MTR_4g130780 | 38.095 | 126 | 76 | 1 | 5 | 128 | 4 | 129 | 1.71e-24 | 94.7 |
MsG0080049140.01.T01 | MTR_8g094990 | 36.686 | 169 | 91 | 4 | 12 | 167 | 8 | 173 | 3.45e-24 | 96.3 |
MsG0080049140.01.T01 | MTR_4g112310 | 44.706 | 85 | 45 | 1 | 48 | 132 | 3 | 85 | 3.42e-23 | 90.1 |
MsG0080049140.01.T01 | MTR_2g088990 | 37.342 | 158 | 89 | 5 | 12 | 168 | 8 | 156 | 6.64e-23 | 91.7 |
MsG0080049140.01.T01 | MTR_4g130800 | 38.281 | 128 | 73 | 3 | 7 | 129 | 4 | 130 | 8.50e-23 | 92.4 |
MsG0080049140.01.T01 | MTR_8g095013 | 42.373 | 118 | 63 | 3 | 11 | 128 | 11 | 123 | 1.07e-22 | 92.8 |
MsG0080049140.01.T01 | MTR_1g077790 | 39.796 | 98 | 58 | 1 | 32 | 128 | 32 | 129 | 3.52e-22 | 89.0 |
MsG0080049140.01.T01 | MTR_4g130800 | 42.202 | 109 | 61 | 2 | 22 | 129 | 22 | 129 | 3.83e-22 | 90.5 |
MsG0080049140.01.T01 | MTR_5g006040 | 26.705 | 176 | 121 | 3 | 12 | 187 | 11 | 178 | 8.92e-22 | 87.8 |
MsG0080049140.01.T01 | MTR_8g095020 | 40.625 | 128 | 63 | 5 | 30 | 148 | 27 | 150 | 2.71e-21 | 89.0 |
MsG0080049140.01.T01 | MTR_3g092170 | 35.220 | 159 | 85 | 3 | 12 | 163 | 8 | 155 | 3.34e-21 | 88.2 |
MsG0080049140.01.T01 | MTR_4g114870 | 32.738 | 168 | 92 | 2 | 32 | 178 | 194 | 361 | 4.53e-20 | 86.7 |
MsG0080049140.01.T01 | MTR_4g114870 | 31.852 | 135 | 89 | 2 | 12 | 146 | 13 | 144 | 1.43e-17 | 79.3 |
MsG0080049140.01.T01 | MTR_1g104800 | 35.833 | 120 | 75 | 1 | 49 | 166 | 43 | 162 | 1.73e-18 | 79.3 |
MsG0080049140.01.T01 | MTR_6g083240 | 33.083 | 133 | 81 | 4 | 37 | 165 | 35 | 163 | 6.28e-17 | 74.7 |
MsG0080049140.01.T01 | MTR_6g080660 | 33.333 | 114 | 69 | 3 | 17 | 130 | 18 | 124 | 2.01e-16 | 74.3 |
MsG0080049140.01.T01 | MTR_0334s0010 | 37.500 | 120 | 64 | 4 | 17 | 128 | 9 | 125 | 2.04e-16 | 73.9 |
MsG0080049140.01.T01 | MTR_4g114830 | 34.375 | 96 | 61 | 2 | 25 | 118 | 25 | 120 | 3.10e-16 | 72.8 |
MsG0080049140.01.T01 | MTR_8g007020 | 36.719 | 128 | 72 | 4 | 5 | 130 | 2 | 122 | 5.00e-16 | 72.8 |
MsG0080049140.01.T01 | MTR_1g090190 | 31.613 | 155 | 93 | 6 | 32 | 184 | 26 | 169 | 6.78e-16 | 72.0 |
MsG0080049140.01.T01 | MTR_8g099220 | 32.500 | 120 | 76 | 2 | 13 | 128 | 9 | 127 | 1.09e-15 | 70.5 |
MsG0080049140.01.T01 | MTR_8g007035 | 35.938 | 128 | 73 | 4 | 5 | 130 | 2 | 122 | 2.82e-15 | 70.9 |
MsG0080049140.01.T01 | MTR_4g067200 | 27.869 | 122 | 77 | 3 | 17 | 128 | 9 | 129 | 2.59e-14 | 67.8 |
MsG0080049140.01.T01 | MTR_4g066110 | 27.869 | 122 | 77 | 3 | 17 | 128 | 9 | 129 | 2.59e-14 | 67.8 |
MsG0080049140.01.T01 | MTR_7g086100 | 33.333 | 126 | 75 | 3 | 13 | 134 | 7 | 127 | 8.13e-14 | 67.8 |
MsG0080049140.01.T01 | MTR_2g025580 | 34.426 | 122 | 65 | 3 | 44 | 164 | 39 | 146 | 8.16e-14 | 66.6 |
MsG0080049140.01.T01 | MTR_6g023760 | 36.735 | 98 | 56 | 4 | 32 | 128 | 29 | 121 | 5.91e-13 | 64.3 |
MsG0080049140.01.T01 | MTR_3g099540 | 39.506 | 81 | 48 | 1 | 48 | 128 | 42 | 121 | 8.50e-13 | 62.8 |
MsG0080049140.01.T01 | MTR_8g089110 | 32.759 | 116 | 74 | 2 | 11 | 126 | 7 | 118 | 1.29e-12 | 62.0 |
MsG0080049140.01.T01 | MTR_3g099580 | 40.741 | 81 | 47 | 1 | 48 | 128 | 41 | 120 | 1.44e-12 | 63.5 |
MsG0080049140.01.T01 | MTR_7g086090 | 33.058 | 121 | 72 | 3 | 12 | 128 | 6 | 121 | 1.82e-12 | 63.9 |
MsG0080049140.01.T01 | MTR_7g086280 | 30.952 | 126 | 78 | 3 | 13 | 134 | 7 | 127 | 3.02e-12 | 62.4 |
MsG0080049140.01.T01 | MTR_6g013420 | 31.343 | 134 | 77 | 5 | 7 | 131 | 10 | 137 | 3.11e-12 | 62.4 |
MsG0080049140.01.T01 | MTR_3g099570 | 39.506 | 81 | 48 | 1 | 48 | 128 | 41 | 120 | 3.67e-12 | 62.4 |
MsG0080049140.01.T01 | MTR_1g112700 | 22.995 | 187 | 121 | 5 | 1 | 182 | 1 | 169 | 3.74e-12 | 62.4 |
MsG0080049140.01.T01 | MTR_1g090420 | 27.152 | 151 | 104 | 3 | 15 | 161 | 15 | 163 | 5.67e-12 | 62.4 |
MsG0080049140.01.T01 | MTR_7g086230 | 30.159 | 126 | 79 | 3 | 13 | 134 | 7 | 127 | 7.86e-12 | 61.2 |
MsG0080049140.01.T01 | MTR_3g099980 | 37.634 | 93 | 53 | 2 | 37 | 128 | 34 | 122 | 2.54e-11 | 60.5 |
MsG0080049140.01.T01 | MTR_3g099680 | 37.634 | 93 | 53 | 2 | 37 | 128 | 34 | 122 | 7.95e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080049140.01.T01 | AT4G31840 | 50.000 | 176 | 77 | 3 | 12 | 187 | 11 | 175 | 2.87e-57 | 178 |
MsG0080049140.01.T01 | AT2G25060 | 50.286 | 175 | 75 | 5 | 11 | 184 | 15 | 178 | 6.73e-55 | 172 |
MsG0080049140.01.T01 | AT5G25090 | 53.279 | 122 | 57 | 0 | 11 | 132 | 9 | 130 | 4.02e-47 | 152 |
MsG0080049140.01.T01 | AT4G30590 | 53.600 | 125 | 54 | 1 | 12 | 132 | 8 | 132 | 2.03e-45 | 148 |
MsG0080049140.01.T01 | AT5G57920 | 44.079 | 152 | 82 | 3 | 26 | 177 | 53 | 201 | 1.10e-43 | 145 |
MsG0080049140.01.T01 | AT5G57920 | 44.079 | 152 | 82 | 3 | 26 | 177 | 21 | 169 | 1.14e-43 | 144 |
MsG0080049140.01.T01 | AT5G57920 | 44.079 | 152 | 82 | 3 | 26 | 177 | 20 | 168 | 1.24e-43 | 144 |
MsG0080049140.01.T01 | AT2G23990 | 51.773 | 141 | 55 | 3 | 14 | 150 | 10 | 141 | 6.53e-42 | 140 |
MsG0080049140.01.T01 | AT2G23990 | 45.625 | 160 | 55 | 4 | 14 | 150 | 10 | 160 | 3.25e-37 | 129 |
MsG0080049140.01.T01 | AT3G20570 | 41.104 | 163 | 82 | 5 | 12 | 164 | 15 | 173 | 2.08e-35 | 123 |
MsG0080049140.01.T01 | AT5G14345 | 57.143 | 91 | 37 | 1 | 40 | 130 | 28 | 116 | 2.71e-31 | 111 |
MsG0080049140.01.T01 | AT5G53870 | 40.252 | 159 | 84 | 5 | 10 | 161 | 9 | 163 | 1.87e-29 | 111 |
MsG0080049140.01.T01 | AT5G53870 | 40.252 | 159 | 84 | 5 | 10 | 161 | 9 | 163 | 2.45e-29 | 111 |
MsG0080049140.01.T01 | AT4G28365 | 39.506 | 162 | 89 | 6 | 13 | 168 | 11 | 169 | 1.14e-28 | 106 |
MsG0080049140.01.T01 | AT3G18590 | 45.833 | 120 | 59 | 4 | 12 | 129 | 12 | 127 | 1.66e-28 | 105 |
MsG0080049140.01.T01 | AT4G27520 | 44.628 | 121 | 63 | 3 | 12 | 132 | 16 | 132 | 3.04e-28 | 108 |
MsG0080049140.01.T01 | AT4G32490 | 34.857 | 175 | 85 | 5 | 13 | 166 | 11 | 177 | 2.95e-25 | 97.8 |
MsG0080049140.01.T01 | AT1G48940 | 38.889 | 126 | 69 | 3 | 13 | 132 | 6 | 129 | 2.99e-25 | 96.7 |
MsG0080049140.01.T01 | AT1G79800 | 34.459 | 148 | 85 | 4 | 8 | 147 | 8 | 151 | 6.20e-22 | 88.6 |
MsG0080049140.01.T01 | AT2G31050 | 36.296 | 135 | 80 | 3 | 11 | 145 | 12 | 140 | 1.67e-21 | 87.4 |
MsG0080049140.01.T01 | AT1G64640 | 35.897 | 117 | 74 | 1 | 32 | 148 | 36 | 151 | 2.01e-21 | 87.0 |
MsG0080049140.01.T01 | AT2G26720 | 33.094 | 139 | 85 | 3 | 11 | 149 | 12 | 142 | 9.91e-20 | 82.8 |
MsG0080049140.01.T01 | AT2G32300 | 35.714 | 140 | 74 | 5 | 25 | 160 | 23 | 150 | 5.51e-19 | 82.0 |
MsG0080049140.01.T01 | AT2G32300 | 35.714 | 140 | 74 | 5 | 25 | 160 | 53 | 180 | 1.77e-18 | 81.3 |
MsG0080049140.01.T01 | AT5G20230 | 34.426 | 122 | 76 | 3 | 26 | 145 | 23 | 142 | 5.45e-17 | 75.5 |
MsG0080049140.01.T01 | AT5G26330 | 37.500 | 80 | 50 | 0 | 50 | 129 | 43 | 122 | 2.74e-16 | 73.6 |
MsG0080049140.01.T01 | AT5G07475 | 28.571 | 182 | 117 | 6 | 12 | 187 | 10 | 184 | 1.65e-15 | 71.6 |
MsG0080049140.01.T01 | AT3G60270 | 36.364 | 99 | 58 | 2 | 32 | 130 | 29 | 122 | 2.47e-14 | 68.2 |
MsG0080049140.01.T01 | AT1G72230 | 31.967 | 122 | 72 | 2 | 48 | 159 | 38 | 158 | 3.52e-13 | 65.1 |
MsG0080049140.01.T01 | AT1G45063 | 31.933 | 119 | 75 | 3 | 12 | 129 | 14 | 127 | 2.12e-12 | 64.3 |
MsG0080049140.01.T01 | AT1G45063 | 31.933 | 119 | 75 | 3 | 12 | 129 | 14 | 127 | 2.94e-12 | 64.3 |
MsG0080049140.01.T01 | AT3G27200 | 29.839 | 124 | 76 | 3 | 11 | 129 | 5 | 122 | 3.02e-12 | 62.4 |
Find 52 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATCATCTTGTTCTCTTT+TGG | 0.177913 | contig92end:+37683 | MsG0080049140.01.T01:CDS |
GCAGAAATTATGGATGATTT+TGG | 0.191043 | contig92end:-37580 | None:intergenic |
TCTTAAAGATGCAGAAATTA+TGG | 0.244416 | contig92end:-37590 | None:intergenic |
CTGTGGTTGTCATGAGTCTA+AGG | 0.276529 | contig92end:+38411 | MsG0080049140.01.T01:CDS |
CCCATCATTGTAGTGTTTGA+TGG | 0.297797 | contig92end:-38303 | None:intergenic |
TGAATATCCAAACTAAAATA+AGG | 0.318116 | contig92end:-38611 | None:intergenic |
TTCATAATATTAGTATTATT+AGG | 0.321476 | contig92end:+38630 | MsG0080049140.01.T01:three_prime_UTR |
TCTCCACTGATGTAGTAGTA+TGG | 0.331847 | contig92end:-38356 | None:intergenic |
AAAGTGAGATTTGATCATTC+TGG | 0.347650 | contig92end:+38332 | MsG0080049140.01.T01:CDS |
AGTATTATTAGGATTAAGAT+TGG | 0.382883 | contig92end:+38641 | MsG0080049140.01.T01:three_prime_UTR |
AATCTGATTCTCTCAACAAA+TGG | 0.402045 | contig92end:+37793 | MsG0080049140.01.T01:CDS |
GGAGCAACAGCTGAGCCAGC+TGG | 0.404423 | contig92end:-38494 | None:intergenic |
CTACTACATCAGTGGAGAAA+AGG | 0.404851 | contig92end:+38361 | MsG0080049140.01.T01:CDS |
CCCATCAAACACTACAATGA+TGG | 0.417208 | contig92end:+38302 | MsG0080049140.01.T01:CDS |
CCATCATTGTAGTGTTTGAT+GGG | 0.419117 | contig92end:-38302 | None:intergenic |
TGCATGGAAGGTTCCTTCTT+CGG | 0.420616 | contig92end:+37770 | MsG0080049140.01.T01:CDS |
CCTTCACCAGCTGAAGTTGA+TGG | 0.422615 | contig92end:+38470 | MsG0080049140.01.T01:CDS |
GCAAGGTGGTGGTGTATTTG+TGG | 0.435276 | contig92end:+38544 | MsG0080049140.01.T01:CDS |
AAAAGTGAAAATTACTTAGA+TGG | 0.435763 | contig92end:-37845 | None:intergenic |
ATTAGGATTAAGATTGGGAT+TGG | 0.437592 | contig92end:+38647 | MsG0080049140.01.T01:three_prime_UTR |
ACAAATGGGCTTCAAGTGTT+CGG | 0.440098 | contig92end:+37808 | MsG0080049140.01.T01:CDS |
AAAACAGTTGCACCACTTGT+TGG | 0.440200 | contig92end:-38521 | None:intergenic |
GCAGCTAAGGATATCTTGCT+TGG | 0.450579 | contig92end:+37735 | MsG0080049140.01.T01:CDS |
TACTACATCAGTGGAGAAAA+GGG | 0.477152 | contig92end:+38362 | MsG0080049140.01.T01:CDS |
ATCTGATTCTCTCAACAAAT+GGG | 0.481996 | contig92end:+37794 | MsG0080049140.01.T01:CDS |
TGTGGTTGTCATGAGTCTAA+GGG | 0.500303 | contig92end:+38412 | MsG0080049140.01.T01:CDS |
GTTGCACCACTTGTTGGAGC+TGG | 0.502974 | contig92end:-38515 | None:intergenic |
GTATTATTAGGATTAAGATT+GGG | 0.509185 | contig92end:+38642 | MsG0080049140.01.T01:three_prime_UTR |
AGAGAATCAGATTCCGAAGA+AGG | 0.516269 | contig92end:-37783 | None:intergenic |
ACTTCAGCTGGTGAAGGTGC+TGG | 0.517037 | contig92end:-38464 | None:intergenic |
CCATCAAACACTACAATGAT+GGG | 0.517725 | contig92end:+38303 | MsG0080049140.01.T01:CDS |
GCTGAAGTTGATGGTCCAGC+TGG | 0.527675 | contig92end:+38479 | MsG0080049140.01.T01:CDS |
GCTGGACCATCAACTTCAGC+TGG | 0.530028 | contig92end:-38476 | None:intergenic |
TCAAGTGTTCGGTTTCAAGT+TGG | 0.534785 | contig92end:+37819 | MsG0080049140.01.T01:CDS |
TCAGTTTGGAAATATGAAGC+TGG | 0.536642 | contig92end:+38221 | MsG0080049140.01.T01:intron |
GAAAAGGGTCACTGTGAGAA+GGG | 0.555253 | contig92end:+38377 | MsG0080049140.01.T01:CDS |
GTGGTTGTCATGAGTCTAAG+GGG | 0.573266 | contig92end:+38413 | MsG0080049140.01.T01:CDS |
AGAAAAGGGTCACTGTGAGA+AGG | 0.575414 | contig92end:+38376 | MsG0080049140.01.T01:CDS |
CCATCAACTTCAGCTGGTGA+AGG | 0.581807 | contig92end:-38470 | None:intergenic |
GGTGGTGTATTTGTGGCTGT+AGG | 0.582095 | contig92end:+38551 | MsG0080049140.01.T01:CDS |
GTTGCTCCAGCTCCAACAAG+TGG | 0.607631 | contig92end:+38509 | MsG0080049140.01.T01:CDS |
ATATTAAAATTTGAAAGACA+AGG | 0.615670 | contig92end:-38732 | None:intergenic |
GCTAAGGATATCTTGCTTGG+TGG | 0.617121 | contig92end:+37738 | MsG0080049140.01.T01:CDS |
GGTCCATACTACTACATCAG+TGG | 0.620422 | contig92end:+38353 | MsG0080049140.01.T01:CDS |
TGGCAAAACTGATGCATGGA+AGG | 0.623442 | contig92end:+37758 | MsG0080049140.01.T01:CDS |
TGGTTGTCATGAGTCTAAGG+GGG | 0.630347 | contig92end:+38414 | MsG0080049140.01.T01:CDS |
TAGGAGTGTTTGTTGCCATG+TGG | 0.640277 | contig92end:+38570 | MsG0080049140.01.T01:CDS |
TTGGTGGCAAAACTGATGCA+TGG | 0.676457 | contig92end:+37754 | MsG0080049140.01.T01:CDS |
TTCAAATCAGAAAAGCCACA+TGG | 0.691376 | contig92end:-38585 | None:intergenic |
GGTTGTCATGAGTCTAAGGG+GGG | 0.691450 | contig92end:+38415 | MsG0080049140.01.T01:CDS |
GTTGTCATGAGTCTAAGGGG+GGG | 0.700416 | contig92end:+38416 | MsG0080049140.01.T01:CDS |
GAAGGGTCAGAAGCTTACTG+TGG | 0.745278 | contig92end:+38394 | MsG0080049140.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTCATAATATTAGTATTATT+AGG | + | contig92end:38630-38649 | MsG0080049140.01.T01:three_prime_UTR | 10.0% |
!! | ATATTAAAATTTGAAAGACA+AGG | - | contig92end:38735-38754 | None:intergenic | 15.0% |
!! | CATCACATAAAAATAAAAAT+TGG | - | contig92end:38155-38174 | None:intergenic | 15.0% |
!!! | AATATAAAAAAATTGGGTTT+TGG | - | contig92end:38075-38094 | None:intergenic | 15.0% |
!!! | ACAATAAAGAAACAATTTTA+AGG | - | contig92end:37990-38009 | None:intergenic | 15.0% |
!!! | TGAATTTTTACTGATAATTA+AGG | - | contig92end:37926-37945 | None:intergenic | 15.0% |
!!! | TGAATTTTTAGTGATAAAAA+AGG | - | contig92end:37884-37903 | None:intergenic | 15.0% |
!! | AAAAGTGAAAATTACTTAGA+TGG | - | contig92end:37848-37867 | None:intergenic | 20.0% |
!! | AGTATTATTAGGATTAAGAT+TGG | + | contig92end:38641-38660 | MsG0080049140.01.T01:three_prime_UTR | 20.0% |
!! | GGTGGAAATATAAAAAAATT+GGG | - | contig92end:38081-38100 | None:intergenic | 20.0% |
!! | GTATTATTAGGATTAAGATT+GGG | + | contig92end:38642-38661 | MsG0080049140.01.T01:three_prime_UTR | 20.0% |
!! | TGAATATCCAAACTAAAATA+AGG | - | contig92end:38614-38633 | None:intergenic | 20.0% |
!! | TGGTGGAAATATAAAAAAAT+TGG | - | contig92end:38082-38101 | None:intergenic | 20.0% |
!!! | TTTTTACATTTTCATCATCT+TGG | + | contig92end:38038-38057 | MsG0080049140.01.T01:intron | 20.0% |
! | ATGAACAATAAAGTAGTTAG+TGG | - | contig92end:38191-38210 | None:intergenic | 25.0% |
! | TCTTAAAGATGCAGAAATTA+TGG | - | contig92end:37593-37612 | None:intergenic | 25.0% |
! | TTGAAAACAAAATACCAAGA+TGG | - | contig92end:38102-38121 | None:intergenic | 25.0% |
!! | TTTTTATATTTCCACCATCT+TGG | + | contig92end:38085-38104 | MsG0080049140.01.T01:intron | 25.0% |
!!! | TCATATTTTTGTTCTCAGTT+TGG | + | contig92end:38207-38226 | MsG0080049140.01.T01:intron | 25.0% |
!!! | TGAATTGCCTTATTTTAGTT+TGG | + | contig92end:38604-38623 | MsG0080049140.01.T01:three_prime_UTR | 25.0% |
AAAACAAAATACCAAGATGG+TGG | - | contig92end:38099-38118 | None:intergenic | 30.0% | |
AAAGTGAGATTTGATCATTC+TGG | + | contig92end:38332-38351 | MsG0080049140.01.T01:CDS | 30.0% | |
AATCTGATTCTCTCAACAAA+TGG | + | contig92end:37793-37812 | MsG0080049140.01.T01:CDS | 30.0% | |
ATCTGATTCTCTCAACAAAT+GGG | + | contig92end:37794-37813 | MsG0080049140.01.T01:CDS | 30.0% | |
ATTAGGATTAAGATTGGGAT+TGG | + | contig92end:38647-38666 | MsG0080049140.01.T01:three_prime_UTR | 30.0% | |
CAACATTTGCAGAAAAACAA+TGG | + | contig92end:37647-37666 | MsG0080049140.01.T01:exon | 30.0% | |
! | GCAGAAATTATGGATGATTT+TGG | - | contig92end:37583-37602 | None:intergenic | 30.0% |
! | TTCATCATCTTGTTCTCTTT+TGG | + | contig92end:37683-37702 | MsG0080049140.01.T01:CDS | 30.0% |
!! | TTGGTTCTTTTTGTTCTCTT+TGG | + | contig92end:37702-37721 | MsG0080049140.01.T01:CDS | 30.0% |
ATTTGCAGAAAAACAATGGC+TGG | + | contig92end:37651-37670 | MsG0080049140.01.T01:exon | 35.0% | |
CCATCAAACACTACAATGAT+GGG | + | contig92end:38303-38322 | MsG0080049140.01.T01:CDS | 35.0% | |
CCATCATTGTAGTGTTTGAT+GGG | - | contig92end:38305-38324 | None:intergenic | 35.0% | |
TACTACATCAGTGGAGAAAA+GGG | + | contig92end:38362-38381 | MsG0080049140.01.T01:CDS | 35.0% | |
TCAGTTTGGAAATATGAAGC+TGG | + | contig92end:38221-38240 | MsG0080049140.01.T01:intron | 35.0% | |
TTCAAATCAGAAAAGCCACA+TGG | - | contig92end:38588-38607 | None:intergenic | 35.0% | |
! | TTCTGTTTTGCAAGTGAGTA+AGG | + | contig92end:38250-38269 | MsG0080049140.01.T01:CDS | 35.0% |
AAAACAGTTGCACCACTTGT+TGG | - | contig92end:38524-38543 | None:intergenic | 40.0% | |
AGAGAATCAGATTCCGAAGA+AGG | - | contig92end:37786-37805 | None:intergenic | 40.0% | |
CCCATCAAACACTACAATGA+TGG | + | contig92end:38302-38321 | MsG0080049140.01.T01:CDS | 40.0% | |
CCCATCATTGTAGTGTTTGA+TGG | - | contig92end:38306-38325 | None:intergenic | 40.0% | |
CTACTACATCAGTGGAGAAA+AGG | + | contig92end:38361-38380 | MsG0080049140.01.T01:CDS | 40.0% | |
GCTGGTGAAAAAGCAACAAT+GGG | - | contig92end:38449-38468 | None:intergenic | 40.0% | |
TCTCCACTGATGTAGTAGTA+TGG | - | contig92end:38359-38378 | None:intergenic | 40.0% | |
TGCTGGTGAAAAAGCAACAA+TGG | - | contig92end:38450-38469 | None:intergenic | 40.0% | |
TGTGGTTGTCATGAGTCTAA+GGG | + | contig92end:38412-38431 | MsG0080049140.01.T01:CDS | 40.0% | |
! | ACAAATGGGCTTCAAGTGTT+CGG | + | contig92end:37808-37827 | MsG0080049140.01.T01:CDS | 40.0% |
! | TCAAGTGTTCGGTTTCAAGT+TGG | + | contig92end:37819-37838 | MsG0080049140.01.T01:CDS | 40.0% |
!!! | GTAGTGTTTGATGGGTTTTG+AGG | - | contig92end:38297-38316 | None:intergenic | 40.0% |
AGAAAAGGGTCACTGTGAGA+AGG | + | contig92end:38376-38395 | MsG0080049140.01.T01:CDS | 45.0% | |
CTGTGGTTGTCATGAGTCTA+AGG | + | contig92end:38411-38430 | MsG0080049140.01.T01:CDS | 45.0% | |
GAAAAGGGTCACTGTGAGAA+GGG | + | contig92end:38377-38396 | MsG0080049140.01.T01:CDS | 45.0% | |
GCAGCTAAGGATATCTTGCT+TGG | + | contig92end:37735-37754 | MsG0080049140.01.T01:CDS | 45.0% | |
GCTAAGGATATCTTGCTTGG+TGG | + | contig92end:37738-37757 | MsG0080049140.01.T01:CDS | 45.0% | |
GGTCCATACTACTACATCAG+TGG | + | contig92end:38353-38372 | MsG0080049140.01.T01:CDS | 45.0% | |
GTGGTTGTCATGAGTCTAAG+GGG | + | contig92end:38413-38432 | MsG0080049140.01.T01:CDS | 45.0% | |
TGCATGGAAGGTTCCTTCTT+CGG | + | contig92end:37770-37789 | MsG0080049140.01.T01:CDS | 45.0% | |
TGGCAAAACTGATGCATGGA+AGG | + | contig92end:37758-37777 | MsG0080049140.01.T01:CDS | 45.0% | |
TGGTTGTCATGAGTCTAAGG+GGG | + | contig92end:38414-38433 | MsG0080049140.01.T01:CDS | 45.0% | |
! | AGTGGTGCAACTGTTTTGCA+AGG | + | contig92end:38527-38546 | MsG0080049140.01.T01:CDS | 45.0% |
! | TGGTTGTGCTTTTGCAGCTA+AGG | + | contig92end:37722-37741 | MsG0080049140.01.T01:CDS | 45.0% |
! | TTGGTGGCAAAACTGATGCA+TGG | + | contig92end:37754-37773 | MsG0080049140.01.T01:CDS | 45.0% |
!! | TAGGAGTGTTTGTTGCCATG+TGG | + | contig92end:38570-38589 | MsG0080049140.01.T01:CDS | 45.0% |
CCATCAACTTCAGCTGGTGA+AGG | - | contig92end:38473-38492 | None:intergenic | 50.0% | |
CCTTCACCAGCTGAAGTTGA+TGG | + | contig92end:38470-38489 | MsG0080049140.01.T01:CDS | 50.0% | |
GAAGGGTCAGAAGCTTACTG+TGG | + | contig92end:38394-38413 | MsG0080049140.01.T01:CDS | 50.0% | |
GGTGGTGTATTTGTGGCTGT+AGG | + | contig92end:38551-38570 | MsG0080049140.01.T01:CDS | 50.0% | |
GGTTGTCATGAGTCTAAGGG+GGG | + | contig92end:38415-38434 | MsG0080049140.01.T01:CDS | 50.0% | |
GTTGTCATGAGTCTAAGGGG+GGG | + | contig92end:38416-38435 | MsG0080049140.01.T01:CDS | 50.0% | |
! | GCAACTGTTTTGCAAGGTGG+TGG | + | contig92end:38533-38552 | MsG0080049140.01.T01:CDS | 50.0% |
! | GCAAGGTGGTGGTGTATTTG+TGG | + | contig92end:38544-38563 | MsG0080049140.01.T01:CDS | 50.0% |
! | GGTGCAACTGTTTTGCAAGG+TGG | + | contig92end:38530-38549 | MsG0080049140.01.T01:CDS | 50.0% |
GCTGGACCATCAACTTCAGC+TGG | - | contig92end:38479-38498 | None:intergenic | 55.0% | |
GTTGCTCCAGCTCCAACAAG+TGG | + | contig92end:38509-38528 | MsG0080049140.01.T01:CDS | 55.0% | |
TGAGTCTAAGGGGGGGAAGT+AGG | + | contig92end:38423-38442 | MsG0080049140.01.T01:CDS | 55.0% | |
! | ACTTCAGCTGGTGAAGGTGC+TGG | - | contig92end:38467-38486 | None:intergenic | 55.0% |
! | GTTGCACCACTTGTTGGAGC+TGG | - | contig92end:38518-38537 | None:intergenic | 55.0% |
!! | GCTGAAGTTGATGGTCCAGC+TGG | + | contig92end:38479-38498 | MsG0080049140.01.T01:CDS | 55.0% |
GGAGCAACAGCTGAGCCAGC+TGG | - | contig92end:38497-38516 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
contig92end | gene | 37577 | 38764 | 37577 | ID=MsG0080049140.01;Name=MsG0080049140.01 |
contig92end | mRNA | 37577 | 38764 | 37577 | ID=MsG0080049140.01.T01;Parent=MsG0080049140.01;Name=MsG0080049140.01.T01;_AED=0.26;_eAED=0.26;_QI=89|1|1|1|1|1|2|163|187 |
contig92end | exon | 37577 | 37852 | 37577 | ID=MsG0080049140.01.T01:exon:126;Parent=MsG0080049140.01.T01 |
contig92end | exon | 38225 | 38764 | 38225 | ID=MsG0080049140.01.T01:exon:127;Parent=MsG0080049140.01.T01 |
contig92end | five_prime_UTR | 37577 | 37665 | 37577 | ID=MsG0080049140.01.T01:five_prime_utr;Parent=MsG0080049140.01.T01 |
contig92end | CDS | 37666 | 37852 | 37666 | ID=MsG0080049140.01.T01:cds;Parent=MsG0080049140.01.T01 |
contig92end | CDS | 38225 | 38601 | 38225 | ID=MsG0080049140.01.T01:cds;Parent=MsG0080049140.01.T01 |
contig92end | three_prime_UTR | 38602 | 38764 | 38602 | ID=MsG0080049140.01.T01:three_prime_utr;Parent=MsG0080049140.01.T01 |
Gene Sequence |
Protein sequence |