AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046740.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046740.01.T01 MTR_4g113820 100.000 78 0 0 115 192 1 78 1.78e-50 159
MsG0880046740.01.T01 MTR_8g096700 89.899 99 10 0 5 103 79 177 1.86e-41 142
MsG0880046740.01.T01 MTR_4g006650 60.000 100 37 1 3 102 193 289 1.88e-27 105
MsG0880046740.01.T01 MTR_3g099030 59.596 99 36 2 5 103 62 156 2.00e-27 104
MsG0880046740.01.T01 MTR_3g099040 58.586 99 38 1 5 103 62 157 1.97e-26 102
MsG0880046740.01.T01 MTR_1g007360 59.649 57 23 0 135 191 26 82 1.58e-17 75.1
MsG0880046740.01.T01 MTR_3g110390 54.386 57 26 0 135 191 27 83 5.22e-15 68.6
MsG0880046740.01.T01 MTR_2g026685 50.505 99 47 1 5 103 21 117 7.10e-14 67.8
MsG0880046740.01.T01 MTR_2g026685 50.495 101 48 1 3 103 59 157 1.42e-13 67.8
MsG0880046740.01.T01 MTR_2g026685 50.495 101 48 1 3 103 60 158 1.44e-13 67.8
MsG0880046740.01.T01 MTR_3g110390 52.632 57 26 1 135 191 27 82 1.76e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046740.01.T01 AT5G50740 50.495 101 47 1 3 103 60 157 3.17e-26 99.0
MsG0880046740.01.T01 AT5G50740 50.495 101 47 1 3 103 53 150 8.33e-26 97.8
MsG0880046740.01.T01 AT5G50740 51.515 99 45 1 5 103 62 157 9.20e-25 98.2
MsG0880046740.01.T01 AT5G50740 51.515 99 45 1 5 103 55 150 1.53e-24 97.4
MsG0880046740.01.T01 AT5G50740 51.515 99 45 1 5 103 55 150 1.53e-24 97.4
MsG0880046740.01.T01 AT5G63530 66.337 101 32 2 3 103 84 182 2.78e-21 89.7
MsG0880046740.01.T01 AT5G63530 66.337 101 32 2 3 103 99 197 2.84e-21 89.7
MsG0880046740.01.T01 AT3G02960 39.000 100 51 1 5 104 64 153 3.00e-14 69.3

Find 35 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGTTCTGAAGGTGGTTT+TGG 0.150297 8:-77579275 None:intergenic
GAGAACCAGCTTGGCTTATC+TGG 0.217498 8:+77586182 MsG0880046740.01.T01:CDS
GAGCTTGAGCAGTGGGATTC+AGG 0.269132 8:-77586598 None:intergenic
TTCAATTGAATCTTTGAAGA+TGG 0.404082 8:+77586125 MsG0880046740.01.T01:CDS
ACTCTTTCAAGAACCTTCAA+TGG 0.419505 8:-77579209 None:intergenic
CTAGTGTTAGGATGCTACCT+TGG 0.442749 8:+77586564 MsG0880046740.01.T01:CDS
CAAGCTCTCATAATTTCTAC+AGG 0.456647 8:+77586614 MsG0880046740.01.T01:CDS
ATTAGCAGCAACATTTCTCT+TGG 0.469394 8:-77586148 None:intergenic
GCTTGGCCATGGCCAACCTC+TGG 0.472159 8:-77586206 None:intergenic
ACATGCAGCTGGCTAGTGTT+AGG 0.477537 8:+77586552 MsG0880046740.01.T01:intron
GGCTTATCTGGACCAGAGGT+TGG 0.484520 8:+77586194 MsG0880046740.01.T01:CDS
TCCTCTTGAGAGAACCAGCT+TGG 0.495079 8:+77586173 MsG0880046740.01.T01:CDS
ATGAGAACAGCGCTTGGCCA+TGG 0.500574 8:-77586217 None:intergenic
GGGTGTAATGGCTGGAGCTA+AGG 0.508105 8:+77586335 MsG0880046740.01.T01:CDS
TTCAGGTTTGCTCTTGCCCA+AGG 0.514820 8:-77586581 None:intergenic
TAGTGTTAGGATGCTACCTT+GGG 0.518544 8:+77586565 MsG0880046740.01.T01:CDS
ATGGCCAAGCGCTGTTCTCA+TGG 0.525880 8:+77586219 MsG0880046740.01.T01:CDS
GGAAGAAAAGAAAGCTGAAG+AGG 0.538975 8:+77579334 MsG0880046740.01.T01:CDS
ATTATGAGAGCTTGAGCAGT+GGG 0.542769 8:-77586605 None:intergenic
CTGGTCCAGATAAGCCAAGC+TGG 0.549243 8:-77586187 None:intergenic
GATTTATAATTATGAAGATG+TGG 0.554215 8:+77579136 None:intergenic
AGGAGTAGTTACAGTTGGAA+TGG 0.559635 8:-77586385 None:intergenic
TAAACAGAGGGTGTAATGGC+TGG 0.563650 8:+77586327 MsG0880046740.01.T01:intron
AGAATCACTATCATAACCTT+AGG 0.564388 8:-77579442 None:intergenic
TGTGTAAACAGAGGGTGTAA+TGG 0.582073 8:+77586323 MsG0880046740.01.T01:intron
GAAAGAGAAACCTAAGCCAG+AGG 0.586865 8:+77579313 MsG0880046740.01.T01:CDS
AGACGCATTGAGAAAATCAA+AGG 0.589980 8:+77579508 MsG0880046740.01.T01:CDS
GCCAAGCTGGTTCTCTCAAG+AGG 0.593616 8:-77586174 None:intergenic
AGTTACAGTTGGAATGGCAG+TGG 0.597023 8:-77586379 None:intergenic
TCTGGACCAGAGGTTGGCCA+TGG 0.615026 8:+77586200 MsG0880046740.01.T01:CDS
TACTGATTGCAAATCTCACA+AGG 0.615533 8:+77579160 MsG0880046740.01.T01:CDS
ATTACCATGAGAACAGCGCT+TGG 0.632062 8:-77586223 None:intergenic
GCTTGGCTTATCTGGACCAG+AGG 0.644191 8:+77586190 MsG0880046740.01.T01:CDS
AGGTTCTTGAAAGAGTTCAG+AGG 0.645167 8:+77579216 MsG0880046740.01.T01:CDS
AATTATGAGAGCTTGAGCAG+TGG 0.660731 8:-77586606 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGTTAAAATGTTAAA+TGG - Chr8:77584651-77584670 None:intergenic 10.0%
!! AATCAAAAATAAAAAACATA+TGG - Chr8:77580023-77580042 None:intergenic 10.0%
!! ATAAAAAAATAATAACAAGA+AGG + Chr8:77584269-77584288 MsG0880046740.01.T01:intron 10.0%
!! ATGAAATTATTATTATTAGA+TGG - Chr8:77580949-77580968 None:intergenic 10.0%
!! ATTATAAACTTATTAAAACT+TGG - Chr8:77584105-77584124 None:intergenic 10.0%
!!! CATTTTTTATTAATTGTATT+AGG + Chr8:77584664-77584683 MsG0880046740.01.T01:intron 10.0%
!!! GTTATTTTTTAAAATGAAAT+CGG + Chr8:77581932-77581951 MsG0880046740.01.T01:intron 10.0%
!! AAAACTAAATACAATAACAA+AGG - Chr8:77586293-77586312 None:intergenic 15.0%
!! ATAAAAAATTAAACTTGTAG+AGG + Chr8:77583968-77583987 MsG0880046740.01.T01:intron 15.0%
!! ATTAATAAACAATGAGATAT+AGG + Chr8:77585624-77585643 MsG0880046740.01.T01:intron 15.0%
!! TATCTCATTGTTTATTAATT+TGG - Chr8:77585623-77585642 None:intergenic 15.0%
!! TATTATTGAAACCATAATTA+TGG - Chr8:77580891-77580910 None:intergenic 15.0%
!!! AGTTGTTTTTAAAATGAAAT+CGG + Chr8:77581705-77581724 MsG0880046740.01.T01:intron 15.0%
!!! GTTGTTTTTTAAAATGAAAT+CGG + Chr8:77581478-77581497 MsG0880046740.01.T01:intron 15.0%
!!! TTTAATTTTTTTTCTTCTCA+GGG - Chr8:77584549-77584568 None:intergenic 15.0%
!!! TTTTAAATTTATCTGAATCT+GGG + Chr8:77579378-77579397 MsG0880046740.01.T01:intron 15.0%
!!! TTTTAATTTTTTTTCTTCTC+AGG - Chr8:77584550-77584569 None:intergenic 15.0%
!!! TTTTATTAATTGTATTAGGA+GGG + Chr8:77584668-77584687 MsG0880046740.01.T01:intron 15.0%
!!! TTTTTAAATTTATCTGAATC+TGG + Chr8:77579377-77579396 MsG0880046740.01.T01:intron 15.0%
!!! TTTTTATTAATTGTATTAGG+AGG + Chr8:77584667-77584686 MsG0880046740.01.T01:intron 15.0%
!! AAAACTCAAACTATTCTTAA+AGG - Chr8:77585817-77585836 None:intergenic 20.0%
!! AAACCAAAATAATTGTCTAA+TGG - Chr8:77580840-77580859 None:intergenic 20.0%
!! AAACCAAACTAATTGTTTAA+TGG - Chr8:77580179-77580198 None:intergenic 20.0%
!! AAACCATAATTATGGTTTAA+TGG - Chr8:77580883-77580902 None:intergenic 20.0%
!! AAACCATTAAACAATTAGTT+TGG + Chr8:77580173-77580192 MsG0880046740.01.T01:intron 20.0%
!! AAACCATTAAACCATAATTA+TGG + Chr8:77580877-77580896 MsG0880046740.01.T01:intron 20.0%
!! AAACTCAAACTATTCTTAAA+GGG - Chr8:77585816-77585835 None:intergenic 20.0%
!! AAATCATTACACATTTATCT+TGG + Chr8:77580972-77580991 MsG0880046740.01.T01:intron 20.0%
!! ACTAAAGTGAAAGTAAAAAA+TGG - Chr8:77583693-77583712 None:intergenic 20.0%
!! ACTCAATATAATAAAACCAT+GGG - Chr8:77585438-77585457 None:intergenic 20.0%
!! ATGTTAAAATGTTAAATGGA+AGG - Chr8:77584647-77584666 None:intergenic 20.0%
!! CAGAACTATATCAAAATTAA+TGG - Chr8:77586443-77586462 None:intergenic 20.0%
!! TATTACTGAAACCATAATTA+TGG - Chr8:77581029-77581048 None:intergenic 20.0%
!! TATTTGGATTGAATTAGAAT+GGG - Chr8:77585069-77585088 None:intergenic 20.0%
!! TCAATGTATAATGTAATCTT+TGG + Chr8:77586264-77586283 MsG0880046740.01.T01:intron 20.0%
!! TTTCTTAGGATATTTAAAAG+TGG - Chr8:77586490-77586509 None:intergenic 20.0%
!!! AAACCATTAGACAATTATTT+TGG + Chr8:77580834-77580853 MsG0880046740.01.T01:intron 20.0%
!!! AATAAGTTGTTTTGAATAAG+CGG + Chr8:77581195-77581214 MsG0880046740.01.T01:intron 20.0%
!!! AATAAGTTGTTTTGAATAAG+TGG + Chr8:77581195-77581214 MsG0880046740.01.T01:intron 20.0%
!!! AATTATTTTGAACCTAAGAA+AGG - Chr8:77585967-77585986 None:intergenic 20.0%
!!! ATTATTTTGAACCTAAGAAA+GGG - Chr8:77585966-77585985 None:intergenic 20.0%
!!! CACTTAACAGATTTTTTTAA+TGG + Chr8:77583754-77583773 MsG0880046740.01.T01:intron 20.0%
!!! CTTATTGATTAATTCACATT+AGG + Chr8:77580446-77580465 MsG0880046740.01.T01:intron 20.0%
!!! CTTTTTGGTATATAATTAAC+TGG + Chr8:77586514-77586533 MsG0880046740.01.T01:intron 20.0%
!!! TGTTTGATTTAATTTTTGGA+GGG + Chr8:77584007-77584026 MsG0880046740.01.T01:intron 20.0%
!!! TTGTTTGATTTAATTTTTGG+AGG + Chr8:77584006-77584025 MsG0880046740.01.T01:intron 20.0%
!!! TTTATTTCATTCACTTGTTT+TGG + Chr8:77579577-77579596 MsG0880046740.01.T01:intron 20.0%
!!! TTTGAGTTTTTTTACTATTG+AGG + Chr8:77585827-77585846 MsG0880046740.01.T01:intron 20.0%
! AAAATTAAACTTGTAGAGGT+AGG + Chr8:77583972-77583991 MsG0880046740.01.T01:intron 25.0%
! AAACCATTAAGTACATCTAA+TGG + Chr8:77580070-77580089 MsG0880046740.01.T01:intron 25.0%
! AAACCATTAGATGTACTTAA+TGG - Chr8:77580076-77580095 None:intergenic 25.0%
! AAACTTATTAAAACTTGGCT+CGG - Chr8:77584100-77584119 None:intergenic 25.0%
! AAATTAAACTTGTAGAGGTA+GGG + Chr8:77583973-77583992 MsG0880046740.01.T01:intron 25.0%
! ACAAGAAGGAGAAAATATAA+TGG + Chr8:77584283-77584302 MsG0880046740.01.T01:intron 25.0%
! ACTGACACAAGTTAATTATT+TGG - Chr8:77585245-77585264 None:intergenic 25.0%
! ACTTATGCAATTACTTTCAT+AGG - Chr8:77584205-77584224 None:intergenic 25.0%
! AGAAATTGTCGAAATCAAAT+TGG + Chr8:77579902-77579921 MsG0880046740.01.T01:intron 25.0%
! AGCTTAATTCTAATAAGTAG+AGG - Chr8:77583209-77583228 None:intergenic 25.0%
! ATAATAAAACCATGGGATTA+AGG - Chr8:77585431-77585450 None:intergenic 25.0%
! ATGTAGAAAGCAATTATACA+CGG + Chr8:77583261-77583280 MsG0880046740.01.T01:intron 25.0%
! ATTATCCTCAATTTACTGTT+AGG - Chr8:77583572-77583591 None:intergenic 25.0%
! CCAAATATTCCTTAAACAAA+TGG - Chr8:77585500-77585519 None:intergenic 25.0%
! CCAATTTAATCAGTTTAAAC+TGG + Chr8:77584400-77584419 MsG0880046740.01.T01:intron 25.0%
! CCAGTTTAAACTGATTAAAT+TGG - Chr8:77584403-77584422 None:intergenic 25.0%
! CCATTTGTTTAAGGAATATT+TGG + Chr8:77585497-77585516 MsG0880046740.01.T01:intron 25.0%
! CTTATTCGAAACAACTTATT+AGG - Chr8:77581245-77581264 None:intergenic 25.0%
! GAAATTGTCGAAATCAAATT+GGG + Chr8:77579903-77579922 MsG0880046740.01.T01:intron 25.0%
! GAATTCAAACACAAAATCAT+CGG - Chr8:77579650-77579669 None:intergenic 25.0%
! GACTCAATATAATAAAACCA+TGG - Chr8:77585439-77585458 None:intergenic 25.0%
! GTATTTGGATTGAATTAGAA+TGG - Chr8:77585070-77585089 None:intergenic 25.0%
! TAAAAGATTGCACCATATTT+GGG - Chr8:77583322-77583341 None:intergenic 25.0%
! TAAACAGGTGAATAGATAAT+TGG - Chr8:77586067-77586086 None:intergenic 25.0%
! TAAATATAATCGCGCTTTAA+TGG - Chr8:77580353-77580372 None:intergenic 25.0%
! TAATAAAACCATGGGATTAA+GGG - Chr8:77585430-77585449 None:intergenic 25.0%
! TATAAGTGTGTACTATTAAG+TGG + Chr8:77580470-77580489 MsG0880046740.01.T01:intron 25.0%
! TGAAGCAAAGAAAATTGAAT+AGG - Chr8:77586415-77586434 None:intergenic 25.0%
! TGTTGTTAAAGAAGAAAAAG+CGG + Chr8:77579184-77579203 MsG0880046740.01.T01:CDS 25.0%
! TTAAAAGATTGCACCATATT+TGG - Chr8:77583323-77583342 None:intergenic 25.0%
! TTCTAAATAATAAGGTGCAT+TGG - Chr8:77585365-77585384 None:intergenic 25.0%
! TTTAGTACTCCATTTGTTTA+AGG + Chr8:77585488-77585507 MsG0880046740.01.T01:intron 25.0%
! TTTGGTTACATATAGATGAT+GGG + Chr8:77579692-77579711 MsG0880046740.01.T01:intron 25.0%
!! AAACAAATGGAGTACTAAAA+AGG - Chr8:77585487-77585506 None:intergenic 25.0%
!! AATGGTTTAGTTCAAAATTC+AGG + Chr8:77584301-77584320 MsG0880046740.01.T01:intron 25.0%
!! ATCCTAAGAAAGATACTTTT+TGG + Chr8:77586499-77586518 MsG0880046740.01.T01:intron 25.0%
!! TATTACAAAACCATTTTCAC+TGG + Chr8:77580531-77580550 MsG0880046740.01.T01:intron 25.0%
!! TTCAATTGAATCTTTGAAGA+TGG + Chr8:77586125-77586144 MsG0880046740.01.T01:CDS 25.0%
!!! AACAGATTTTTTTAATGGCA+GGG + Chr8:77583759-77583778 MsG0880046740.01.T01:intron 25.0%
!!! ACATGTGCATTTTATTTTCA+TGG + Chr8:77585663-77585682 MsG0880046740.01.T01:intron 25.0%
!!! ATTAGGGATTGATTTGAATT+TGG + Chr8:77579854-77579873 MsG0880046740.01.T01:intron 25.0%
!!! ATTGTTTAATGGTTTTGCTA+TGG - Chr8:77580168-77580187 None:intergenic 25.0%
!!! ATTTTTTTCTCTTGTTCTGA+AGG - Chr8:77579287-77579306 None:intergenic 25.0%
!!! CTTGCTATGATTTTCAATTT+TGG + Chr8:77579674-77579693 MsG0880046740.01.T01:intron 25.0%
!!! GCAATCTTTTAATTACTCTA+TGG + Chr8:77583331-77583350 MsG0880046740.01.T01:intron 25.0%
!!! GGGTTGTTTGATTTAATTTT+TGG + Chr8:77584003-77584022 MsG0880046740.01.T01:intron 25.0%
!!! GGTTTTTAGTTGTTTTCATT+TGG - Chr8:77584382-77584401 None:intergenic 25.0%
!!! GTTGCTTTTTAAAATGAGAT+CGG + Chr8:77582974-77582993 MsG0880046740.01.T01:intron 25.0%
!!! GTTTTGAAAATGTTCTGTTA+TGG + Chr8:77579987-77580006 MsG0880046740.01.T01:intron 25.0%
!!! TAACAGATTTTTTTAATGGC+AGG + Chr8:77583758-77583777 MsG0880046740.01.T01:intron 25.0%
!!! TACCAAAAAGTATCTTTCTT+AGG - Chr8:77586504-77586523 None:intergenic 25.0%
!!! TATCACTGGTCTTTTTTTAA+GGG - Chr8:77584596-77584615 None:intergenic 25.0%
!!! TCTTGATTTTTGGAAGAAAA+AGG + Chr8:77579767-77579786 MsG0880046740.01.T01:intron 25.0%
!!! TTAGGGATTGATTTGAATTT+GGG + Chr8:77579855-77579874 MsG0880046740.01.T01:intron 25.0%
!!! TTGTTTAATGGTTTTGCTAT+GGG - Chr8:77580167-77580186 None:intergenic 25.0%
!!! TTTTGGTTACATATAGATGA+TGG + Chr8:77579691-77579710 MsG0880046740.01.T01:intron 25.0%
AAAAGATGGCTTAAAACCAT+GGG - Chr8:77585526-77585545 None:intergenic 30.0%
AAAAGATTGCACCATATTTG+GGG - Chr8:77583321-77583340 None:intergenic 30.0%
AAACAATGAGATATAGGATC+AGG + Chr8:77585630-77585649 MsG0880046740.01.T01:intron 30.0%
AAACCATAAGTGTGGTTTAA+TGG - Chr8:77580222-77580241 None:intergenic 30.0%
AAACCATTAAACCACACTTA+TGG + Chr8:77580216-77580235 MsG0880046740.01.T01:intron 30.0%
AAACCCGAATTAATAGAAGT+CGG + Chr8:77584330-77584349 MsG0880046740.01.T01:intron 30.0%
AAATTTATCTGAATCTGGGA+TGG + Chr8:77579382-77579401 MsG0880046740.01.T01:intron 30.0%
AACAATGAGATATAGGATCA+GGG + Chr8:77585631-77585650 MsG0880046740.01.T01:intron 30.0%
AAGAAAATTGAATAGGTGGA+AGG - Chr8:77586408-77586427 None:intergenic 30.0%
AATTAAACTTGTAGAGGTAG+GGG + Chr8:77583974-77583993 MsG0880046740.01.T01:intron 30.0%
AGAATCACTATCATAACCTT+AGG - Chr8:77579445-77579464 None:intergenic 30.0%
AGCAAAGAAAATTGAATAGG+TGG - Chr8:77586412-77586431 None:intergenic 30.0%
ATGTGAAATCTGTTGGTATA+AGG + Chr8:77580571-77580590 MsG0880046740.01.T01:intron 30.0%
CACCTTTAGCAAATTAGATA+TGG - Chr8:77585575-77585594 None:intergenic 30.0%
CTCATAATTTCTACAGGTTA+GGG + Chr8:77586620-77586639 MsG0880046740.01.T01:CDS 30.0%
GAATTTGGGAAAATTGATGA+TGG + Chr8:77579869-77579888 MsG0880046740.01.T01:intron 30.0%
GACACAAGTTAATTATTTGG+TGG - Chr8:77585242-77585261 None:intergenic 30.0%
GTACTAAAAAGGAAGAGAAA+AGG - Chr8:77585476-77585495 None:intergenic 30.0%
TAAAAGATGGCTTAAAACCA+TGG - Chr8:77585527-77585546 None:intergenic 30.0%
TAGAATTAAGCTTTCACTTG+AGG + Chr8:77583217-77583236 MsG0880046740.01.T01:intron 30.0%
TAGTGGTTTAGTGTAAAAGA+TGG - Chr8:77585540-77585559 None:intergenic 30.0%
TATTACTGAAACCATAAGTG+TGG - Chr8:77580230-77580249 None:intergenic 30.0%
TCATAATTTCTACAGGTTAG+GGG + Chr8:77586621-77586640 MsG0880046740.01.T01:CDS 30.0%
TCCAAAAATCAAGAATGCAA+AGG - Chr8:77579761-77579780 None:intergenic 30.0%
TCTCATAATTTCTACAGGTT+AGG + Chr8:77586619-77586638 MsG0880046740.01.T01:CDS 30.0%
TGGATTATGAGTTTCTTTAC+TGG - Chr8:77581082-77581101 None:intergenic 30.0%
TGTTGCTAAGAATTCAAAGT+TGG + Chr8:77579949-77579968 MsG0880046740.01.T01:intron 30.0%
TTTCATCTTCGAAAAGGTAA+CGG + Chr8:77584483-77584502 MsG0880046740.01.T01:intron 30.0%
TTTGTATTTAATCGTGAGTC+AGG + Chr8:77583819-77583838 MsG0880046740.01.T01:intron 30.0%
! AAAACCATTTTCACTGGAAT+TGG + Chr8:77580537-77580556 MsG0880046740.01.T01:intron 30.0%
! AAACCATTTTCACTGCAAAA+TGG + Chr8:77580689-77580708 MsG0880046740.01.T01:intron 30.0%
! AAACCATTTTCACTGGAATT+GGG + Chr8:77580538-77580557 MsG0880046740.01.T01:intron 30.0%
! AAACCATTTTGCAGTGAAAA+TGG - Chr8:77580695-77580714 None:intergenic 30.0%
! AAACCGACTTCTATTAATTC+GGG - Chr8:77584336-77584355 None:intergenic 30.0%
! AAATCTGTTAAGTGATGATG+TGG - Chr8:77583748-77583767 None:intergenic 30.0%
! ACTTTGATTTCTGTTACTGT+CGG - Chr8:77585871-77585890 None:intergenic 30.0%
! AGGATAATGATTTTCGATTC+AGG + Chr8:77583584-77583603 MsG0880046740.01.T01:intron 30.0%
! ATGTTGGTTGCCTATTTATA+AGG - Chr8:77586019-77586038 None:intergenic 30.0%
! GAAACCGACTTCTATTAATT+CGG - Chr8:77584337-77584356 None:intergenic 30.0%
! GGATAATGATTTTCGATTCA+GGG + Chr8:77583585-77583604 MsG0880046740.01.T01:intron 30.0%
! TCCTTTGCATTCTTGATTTT+TGG + Chr8:77579757-77579776 MsG0880046740.01.T01:intron 30.0%
! TTTTCAAAACCATCAGATTC+AGG - Chr8:77579977-77579996 None:intergenic 30.0%
! TTTTCACTGCAAAATGGTTT+TGG + Chr8:77580695-77580714 MsG0880046740.01.T01:intron 30.0%
!! ATATAGATGATGGGTTTGAT+TGG + Chr8:77579701-77579720 MsG0880046740.01.T01:intron 30.0%
!! ATTGTCTAATGGTTTTGCTA+TGG - Chr8:77580829-77580848 None:intergenic 30.0%
!! TGAAAGAAGTGTTTGTAAAC+AGG - Chr8:77586082-77586101 None:intergenic 30.0%
!! TGCCATATCTAATTTGCTAA+AGG + Chr8:77585570-77585589 MsG0880046740.01.T01:intron 30.0%
!! TGTGTTGTTTATGATCAATC+CGG + Chr8:77580637-77580656 MsG0880046740.01.T01:intron 30.0%
!! TTAAGTGGGCTTTGAAATTT+GGG + Chr8:77583171-77583190 MsG0880046740.01.T01:intron 30.0%
!! TTTAAGTGGGCTTTGAAATT+TGG + Chr8:77583170-77583189 MsG0880046740.01.T01:intron 30.0%
!!! AGGATATTGATTTTCGATTC+AGG + Chr8:77583656-77583675 MsG0880046740.01.T01:intron 30.0%
!!! ATCACTGGTCTTTTTTTAAG+GGG - Chr8:77584595-77584614 None:intergenic 30.0%
!!! CAATTTTAAGACACTAGTTG+TGG + Chr8:77585696-77585715 MsG0880046740.01.T01:intron 30.0%
!!! GGATATTGATTTTCGATTCA+GGG + Chr8:77583657-77583676 MsG0880046740.01.T01:intron 30.0%
!!! GTATCACTGGTCTTTTTTTA+AGG - Chr8:77584597-77584616 None:intergenic 30.0%
AAACCATTTCCACAGCAAAA+TGG + Chr8:77580113-77580132 MsG0880046740.01.T01:intron 35.0%
AAAGATTGCACCATATTTGG+GGG - Chr8:77583320-77583339 None:intergenic 35.0%
AAGGAATATTTGGTTACCCA+TGG + Chr8:77585507-77585526 MsG0880046740.01.T01:intron 35.0%
ACAATGAGATATAGGATCAG+GGG + Chr8:77585632-77585651 MsG0880046740.01.T01:intron 35.0%
ACAGTAAGTATACACAGTCA+GGG + Chr8:77583617-77583636 MsG0880046740.01.T01:intron 35.0%
ACAGTTGACAAATTCCTGAA+AGG - Chr8:77579622-77579641 None:intergenic 35.0%
ACTCTCAATTAGGTAAGACA+AGG - Chr8:77584464-77584483 None:intergenic 35.0%
ACTCTTTCAAGAACCTTCAA+TGG - Chr8:77579212-77579231 None:intergenic 35.0%
AGACGCATTGAGAAAATCAA+AGG + Chr8:77579508-77579527 MsG0880046740.01.T01:CDS 35.0%
AGTAAATGAATGTGTGAGAG+AGG - Chr8:77584724-77584743 None:intergenic 35.0%
ATAATAAGGTGCATTGGATC+TGG - Chr8:77585359-77585378 None:intergenic 35.0%
ATCAGTTTAAACTGGATCGT+TGG + Chr8:77584408-77584427 MsG0880046740.01.T01:intron 35.0%
ATTAGATATGGCAGTGTAGA+AGG - Chr8:77585563-77585582 None:intergenic 35.0%
ATTAGCAGCAACATTTCTCT+TGG - Chr8:77586151-77586170 None:intergenic 35.0%
ATTGAAAGAGTGAGAACGAT+TGG - Chr8:77584966-77584985 None:intergenic 35.0%
CAAGCTCTCATAATTTCTAC+AGG + Chr8:77586614-77586633 MsG0880046740.01.T01:CDS 35.0%
CACCAACTCACCTTATAAAT+AGG + Chr8:77586006-77586025 MsG0880046740.01.T01:intron 35.0%
CGAAGATGAAACTCTCAATT+AGG - Chr8:77584474-77584493 None:intergenic 35.0%
CGTTGGATTCATCGAATATT+TGG + Chr8:77584425-77584444 MsG0880046740.01.T01:intron 35.0%
CTCTCAATTAGGTAAGACAA+GGG - Chr8:77584463-77584482 None:intergenic 35.0%
GAAATAAAAGAGAGATGACG+AGG + Chr8:77580404-77580423 MsG0880046740.01.T01:intron 35.0%
GCTGATGTTACAACAGAATT+TGG - Chr8:77584990-77585009 None:intergenic 35.0%
GGTGTAGAAAGCAATTATGT+TGG + Chr8:77583238-77583257 MsG0880046740.01.T01:intron 35.0%
GTAAATGAATGTGTGAGAGA+GGG - Chr8:77584723-77584742 None:intergenic 35.0%
GTCTTTATGCAAACATCACA+TGG - Chr8:77585755-77585774 None:intergenic 35.0%
GTGTATACTTACTGTCAGTT+AGG - Chr8:77583612-77583631 None:intergenic 35.0%
GTTAAACTAACAACTTGCCA+AGG + Chr8:77583481-77583500 MsG0880046740.01.T01:intron 35.0%
GTTAGAGAGAGAAATGAGTA+TGG - Chr8:77581102-77581121 None:intergenic 35.0%
TAAGACACTAGTTGTGGATA+AGG + Chr8:77585702-77585721 MsG0880046740.01.T01:intron 35.0%
TGAAATCTGTTGGTATAAGG+TGG + Chr8:77580574-77580593 MsG0880046740.01.T01:intron 35.0%
TGACAAATTCCTGAAAGGAT+GGG - Chr8:77579617-77579636 None:intergenic 35.0%
TGAGAGTTTCATCTTCGAAA+AGG + Chr8:77584477-77584496 MsG0880046740.01.T01:intron 35.0%
TGATTCGATGTGAAATCTGT+TGG + Chr8:77580564-77580583 MsG0880046740.01.T01:intron 35.0%
TGCCTATTTATAAGGTGAGT+TGG - Chr8:77586011-77586030 None:intergenic 35.0%
TGTTGGTATAAGGTGGAATT+CGG + Chr8:77580581-77580600 MsG0880046740.01.T01:intron 35.0%
TGTTTATGATCAATCCGGTT+CGG + Chr8:77580642-77580661 MsG0880046740.01.T01:intron 35.0%
TTATTATATGGTGCAGCCTA+AGG + Chr8:77579426-77579445 MsG0880046740.01.T01:intron 35.0%
TTGACAAATTCCTGAAAGGA+TGG - Chr8:77579618-77579637 None:intergenic 35.0%
TTTCCCAATTCCAGTGAAAA+TGG - Chr8:77580544-77580563 None:intergenic 35.0%
! AGAAGTCGGTTTCACTAATT+TGG + Chr8:77584344-77584363 MsG0880046740.01.T01:intron 35.0%
! ATAACAGAAGTGTAGAGTCA+GGG + Chr8:77583791-77583810 MsG0880046740.01.T01:intron 35.0%
! ATGCTACTTACTCAACACTA+AGG - Chr8:77583461-77583480 None:intergenic 35.0%
! ATGTTAAATGGAAGGTGTAC+AGG - Chr8:77584639-77584658 None:intergenic 35.0%
! GAATGAAGAGTAGTTGATGT+TGG - Chr8:77586035-77586054 None:intergenic 35.0%
! GTTTGAAAACCATTTTGCTG+TGG - Chr8:77580787-77580806 None:intergenic 35.0%
! TACTGATTGCAAATCTCACA+AGG + Chr8:77579160-77579179 MsG0880046740.01.T01:CDS 35.0%
! TGGTTTTCTTTGATCCAACA+TGG - Chr8:77580056-77580075 None:intergenic 35.0%
! TGTTAAATGGAAGGTGTACA+GGG - Chr8:77584638-77584657 None:intergenic 35.0%
! TTTCCACAGCAAAATGGTTT+TGG + Chr8:77580119-77580138 MsG0880046740.01.T01:intron 35.0%
!! AAACCATTTTGCTGTGGAAA+TGG - Chr8:77580119-77580138 None:intergenic 35.0%
!! TAAGTGGGCTTTGAAATTTG+GGG + Chr8:77583172-77583191 MsG0880046740.01.T01:intron 35.0%
!! TAATGGTTTTGCTATGGCTA+TGG - Chr8:77580823-77580842 None:intergenic 35.0%
!! TAATGGTTTTGCTATGGGTA+TGG - Chr8:77580162-77580181 None:intergenic 35.0%
!! TGACAGAGAGAAGAAGTATT+TGG - Chr8:77585085-77585104 None:intergenic 35.0%
!! TTTAATTTAGTGGGCTTGGT+GGG + Chr8:77583141-77583160 MsG0880046740.01.T01:intron 35.0%
!!! CTTGTTTTGGTTCAATTCTC+AGG + Chr8:77579590-77579609 MsG0880046740.01.T01:intron 35.0%
!!! TGGTTTTGGAGTACAATTCA+CGG + Chr8:77580752-77580771 MsG0880046740.01.T01:intron 35.0%
!!! TTTTTCTCTTGTTCTGAAGG+TGG - Chr8:77579284-77579303 None:intergenic 35.0%
AATTATGAGAGCTTGAGCAG+TGG - Chr8:77586609-77586628 None:intergenic 40.0%
ACACTAGTTGTGGATAAGGT+TGG + Chr8:77585706-77585725 MsG0880046740.01.T01:intron 40.0%
AGAAAAAGCGGATCCATTGA+AGG + Chr8:77579196-77579215 MsG0880046740.01.T01:CDS 40.0%
AGGAGTAGTTACAGTTGGAA+TGG - Chr8:77586388-77586407 None:intergenic 40.0%
AGGGACCTAACAGTAAATTG+AGG + Chr8:77583564-77583583 MsG0880046740.01.T01:intron 40.0%
AGGTTCTTGAAAGAGTTCAG+AGG + Chr8:77579216-77579235 MsG0880046740.01.T01:CDS 40.0%
ATAGTAAGTGCACACAGTCA+GGG + Chr8:77583545-77583564 MsG0880046740.01.T01:intron 40.0%
ATATATGCTTGACATGCAGC+TGG + Chr8:77586541-77586560 MsG0880046740.01.T01:intron 40.0%
ATTATGAGAGCTTGAGCAGT+GGG - Chr8:77586608-77586627 None:intergenic 40.0%
CCATTCCTTGTGTAAACAGA+GGG + Chr8:77586315-77586334 MsG0880046740.01.T01:intron 40.0%
CGAAATTTCACGAAGATCCT+TGG - Chr8:77583501-77583520 None:intergenic 40.0%
GACAGTAAGTATACACAGTC+AGG + Chr8:77583616-77583635 MsG0880046740.01.T01:intron 40.0%
GACGAGGCTTTACAAAAAAG+TGG + Chr8:77580420-77580439 MsG0880046740.01.T01:intron 40.0%
GACTTGGGAGAAGAAAGAAA+GGG - Chr8:77584893-77584912 None:intergenic 40.0%
GAGAATTGGGAGTAATGAGT+TGG + Chr8:77579827-77579846 MsG0880046740.01.T01:intron 40.0%
GATTGTGATATGCACCATGT+TGG + Chr8:77580039-77580058 MsG0880046740.01.T01:intron 40.0%
GCAATTATACACGGTGCATA+AGG + Chr8:77583270-77583289 MsG0880046740.01.T01:intron 40.0%
GGAAGAAAAGAAAGCTGAAG+AGG + Chr8:77579334-77579353 MsG0880046740.01.T01:CDS 40.0%
GTGAAAACAACTGTCTGAGA+CGG + Chr8:77585889-77585908 MsG0880046740.01.T01:intron 40.0%
GTGTGCACTTACTATCAGTT+AGG - Chr8:77583540-77583559 None:intergenic 40.0%
TAGTGTTAGGATGCTACCTT+GGG + Chr8:77586565-77586584 MsG0880046740.01.T01:CDS 40.0%
TCCATTCCTTGTGTAAACAG+AGG + Chr8:77586314-77586333 MsG0880046740.01.T01:intron 40.0%
TTACACCCTCTGTTTACACA+AGG - Chr8:77586323-77586342 None:intergenic 40.0%
! AAGGAGTATGACGTGTCATA+GGG - Chr8:77583716-77583735 None:intergenic 40.0%
! AATGCTTTGTTGAGAGGCTT+TGG + Chr8:77585107-77585126 MsG0880046740.01.T01:intron 40.0%
! AATTGGGAGTAATGAGTTGG+AGG + Chr8:77579830-77579849 MsG0880046740.01.T01:intron 40.0%
! ACTCCAAAACCATTTTGCTG+TGG - Chr8:77580125-77580144 None:intergenic 40.0%
! AGTAATGAGTTGGAGGGATT+AGG + Chr8:77579837-77579856 MsG0880046740.01.T01:intron 40.0%
! ATTGGGAGTAATGAGTTGGA+GGG + Chr8:77579831-77579850 MsG0880046740.01.T01:intron 40.0%
! GATAACAGAAGTGTAGAGTC+AGG + Chr8:77583790-77583809 MsG0880046740.01.T01:intron 40.0%
! GTAATGAGTTGGAGGGATTA+GGG + Chr8:77579838-77579857 MsG0880046740.01.T01:intron 40.0%
! GTCATGAATGCTTTGTTGAG+AGG + Chr8:77585101-77585120 MsG0880046740.01.T01:intron 40.0%
! TCAGCTTTCTTTTCTTCCTC+TGG - Chr8:77579332-77579351 None:intergenic 40.0%
! TCTGGTGTTAGCATTTCTCA+CGG + Chr8:77580666-77580685 MsG0880046740.01.T01:intron 40.0%
! TGTGTAAACAGAGGGTGTAA+TGG + Chr8:77586323-77586342 MsG0880046740.01.T01:intron 40.0%
!! CTTTAATTTAGTGGGCTTGG+TGG + Chr8:77583140-77583159 MsG0880046740.01.T01:intron 40.0%
!! GATGATGGGTTTGATTGGTT+TGG + Chr8:77579706-77579725 MsG0880046740.01.T01:intron 40.0%
!! GGGAAAATTGATGATGGACT+TGG + Chr8:77579875-77579894 MsG0880046740.01.T01:intron 40.0%
!! TTCTTTTCTTCCTCTGGCTT+AGG - Chr8:77579326-77579345 None:intergenic 40.0%
!! TTGTGTCAGTCACTGATTCT+GGG + Chr8:77585255-77585274 MsG0880046740.01.T01:intron 40.0%
!!! ACTGGTCTTTTTTTAAGGGG+TGG - Chr8:77584592-77584611 None:intergenic 40.0%
!!! CTTGTTCTGAAGGTGGTTTT+GGG - Chr8:77579277-77579296 None:intergenic 40.0%
!!! TCTTGTTCTGAAGGTGGTTT+TGG - Chr8:77579278-77579297 None:intergenic 40.0%
!!! TGGTGGGAGCTTTTTTAAGT+GGG + Chr8:77583157-77583176 MsG0880046740.01.T01:intron 40.0%
!!! TGGTTTTGGAGTCTAACTCA+CGG + Chr8:77580709-77580728 MsG0880046740.01.T01:intron 40.0%
!!! TTGGTGGGAGCTTTTTTAAG+TGG + Chr8:77583156-77583175 MsG0880046740.01.T01:intron 40.0%
AAAACCATGGGATTAAGGGC+AGG - Chr8:77585426-77585445 None:intergenic 45.0%
AAGAGTGAGAACGATTGGTG+TGG - Chr8:77584961-77584980 None:intergenic 45.0%
AAGGGAGAAGAGTGGTACTA+AGG - Chr8:77585948-77585967 None:intergenic 45.0%
ACCACTCTTCTCCCTTTCTT+AGG + Chr8:77585952-77585971 MsG0880046740.01.T01:intron 45.0%
ACCTAAGAAAGGGAGAAGAG+TGG - Chr8:77585956-77585975 None:intergenic 45.0%
ACGTTGAAGAGGAGGAGAAT+TGG + Chr8:77579813-77579832 MsG0880046740.01.T01:intron 45.0%
AGGGATCTAACAGCAAACTG+AGG + Chr8:77583636-77583655 MsG0880046740.01.T01:intron 45.0%
AGTTACAGTTGGAATGGCAG+TGG - Chr8:77586382-77586401 None:intergenic 45.0%
ATGAATGTGTGAGAGAGGGA+AGG - Chr8:77584719-77584738 None:intergenic 45.0%
ATTACCATGAGAACAGCGCT+TGG - Chr8:77586226-77586245 None:intergenic 45.0%
CATAACCACACCCCCAAATA+TGG + Chr8:77583307-77583326 MsG0880046740.01.T01:intron 45.0%
CCCTCTGTTTACACAAGGAA+TGG - Chr8:77586318-77586337 None:intergenic 45.0%
CGTTGAAGAGGAGGAGAATT+GGG + Chr8:77579814-77579833 MsG0880046740.01.T01:intron 45.0%
CTAGTGTTAGGATGCTACCT+TGG + Chr8:77586564-77586583 MsG0880046740.01.T01:CDS 45.0%
GAAAGAGAAACCTAAGCCAG+AGG + Chr8:77579313-77579332 MsG0880046740.01.T01:CDS 45.0%
GAAGAGGTGGATGAAAGAGA+TGG + Chr8:77585175-77585194 MsG0880046740.01.T01:intron 45.0%
GATAGTAAGTGCACACAGTC+AGG + Chr8:77583544-77583563 MsG0880046740.01.T01:intron 45.0%
GGACTTGGGAGAAGAAAGAA+AGG - Chr8:77584894-77584913 None:intergenic 45.0%
GTGGAAGGAGTAGTTACAGT+TGG - Chr8:77586393-77586412 None:intergenic 45.0%
TATGGCAGTGTAGAAGGTAG+TGG - Chr8:77585557-77585576 None:intergenic 45.0%
TGCGGTTGTACATGTATCAC+TGG - Chr8:77584610-77584629 None:intergenic 45.0%
TGGATGTTTGTGAGTGCATC+TGG - Chr8:77585339-77585358 None:intergenic 45.0%
TGGCTATGGTTTCTGTGAGT+TGG - Chr8:77580809-77580828 None:intergenic 45.0%
TGTGAGTGCATCTGGTACAT+TGG - Chr8:77585331-77585350 None:intergenic 45.0%
TTTGGTGAGGTCTGTTGAGA+GGG + Chr8:77585125-77585144 MsG0880046740.01.T01:intron 45.0%
! AAAACAACTGTCTGAGACGG+TGG + Chr8:77585892-77585911 MsG0880046740.01.T01:intron 45.0%
! AGGACGACGTTGATTGTGAA+AGG + Chr8:77579787-77579806 MsG0880046740.01.T01:intron 45.0%
! CAAGGAGTATGACGTGTCAT+AGG - Chr8:77583717-77583736 None:intergenic 45.0%
! CATATTTGGGGGTGTGGTTA+TGG - Chr8:77583309-77583328 None:intergenic 45.0%
! TAAACAGAGGGTGTAATGGC+TGG + Chr8:77586327-77586346 MsG0880046740.01.T01:intron 45.0%
! TAAATGGAAGGTGTACAGGG+TGG - Chr8:77584635-77584654 None:intergenic 45.0%
! TTGTAGAGGTAGGGGTGTAA+CGG + Chr8:77583982-77584001 MsG0880046740.01.T01:intron 45.0%
! TTTGTTGAGAGGCTTTGGTG+AGG + Chr8:77585112-77585131 MsG0880046740.01.T01:intron 45.0%
!! AAGTTGGTGCCTGAATCTGA+TGG + Chr8:77579965-77579984 MsG0880046740.01.T01:intron 45.0%
!! CTTGTGTCAGTCACTGATTC+TGG + Chr8:77585254-77585273 MsG0880046740.01.T01:intron 45.0%
!! GGGCTTTAATTTAGTGGGCT+TGG + Chr8:77583137-77583156 MsG0880046740.01.T01:intron 45.0%
!! GGTTTGGTGATGAAGTTTGC+TGG + Chr8:77579722-77579741 MsG0880046740.01.T01:intron 45.0%
!!! TCTGAAGGTGGTTTTGGGAT+CGG - Chr8:77579272-77579291 None:intergenic 45.0%
!!! ATCATTTTTATTTTATTATA+TGG + Chr8:77579414-77579433 MsG0880046740.01.T01:intron 5.0%
!!! ATTATTATTTCTAAATAATA+AGG - Chr8:77585373-77585392 None:intergenic 5.0%
AAAGGACGACGTTGAAGAGG+AGG + Chr8:77579805-77579824 MsG0880046740.01.T01:intron 50.0%
AAGAGTGGTACTAAGGCAGG+TGG - Chr8:77585941-77585960 None:intergenic 50.0%
AAGGTGTACAGGGTGGTTTG+CGG - Chr8:77584628-77584647 None:intergenic 50.0%
ACATGCAGCTGGCTAGTGTT+AGG + Chr8:77586552-77586571 MsG0880046740.01.T01:intron 50.0%
AGAAGGAAGAAGAGGCTTGG+TGG - Chr8:77584766-77584785 None:intergenic 50.0%
AGTGAGAACGATTGGTGTGG+TGG - Chr8:77584958-77584977 None:intergenic 50.0%
CAGCTTGAGAGAGAGAGAAG+AGG + Chr8:77585159-77585178 MsG0880046740.01.T01:intron 50.0%
CTAAGGCAGGTGGAGTTTGA+TGG - Chr8:77585931-77585950 None:intergenic 50.0%
CTTGAGAGAGAGAGAAGAGG+TGG + Chr8:77585162-77585181 MsG0880046740.01.T01:intron 50.0%
CTTTGGTGAGGTCTGTTGAG+AGG + Chr8:77585124-77585143 MsG0880046740.01.T01:intron 50.0%
GAGAACCAGCTTGGCTTATC+TGG + Chr8:77586182-77586201 MsG0880046740.01.T01:CDS 50.0%
GAGAAGAGTGGTACTAAGGC+AGG - Chr8:77585944-77585963 None:intergenic 50.0%
GAGAGAAGGAAGAAGAGGCT+TGG - Chr8:77584769-77584788 None:intergenic 50.0%
GAGATCGTGTGAGAGAGTGA+AGG - Chr8:77584840-77584859 None:intergenic 50.0%
GGGTGTGGTTATGGTGCATA+AGG - Chr8:77583300-77583319 None:intergenic 50.0%
GTGAAAGGACGACGTTGAAG+AGG + Chr8:77579802-77579821 MsG0880046740.01.T01:intron 50.0%
TCCTCTTGAGAGAACCAGCT+TGG + Chr8:77586173-77586192 MsG0880046740.01.T01:CDS 50.0%
TCGGTGAGAGAAGGAAGAAG+AGG - Chr8:77584774-77584793 None:intergenic 50.0%
TCGTGTGAGAGAGTGAAGGA+AGG - Chr8:77584836-77584855 None:intergenic 50.0%
TGCTAACACCAGATCCGAAC+CGG - Chr8:77580659-77580678 None:intergenic 50.0%
TTCTCAGGTCCCATCCTTTC+AGG + Chr8:77579605-77579624 MsG0880046740.01.T01:intron 50.0%
TTGCACCATATTTGGGGGTG+TGG - Chr8:77583315-77583334 None:intergenic 50.0%
TTTGCACCTCGCTGTCACAT+AGG - Chr8:77583847-77583866 None:intergenic 50.0%
! AAAGGGAGCGTGTTCTGTGT+TGG - Chr8:77584876-77584895 None:intergenic 50.0%
! AAGGGAGCGTGTTCTGTGTT+GGG - Chr8:77584875-77584894 None:intergenic 50.0%
! TGTAGAGGTAGGGGTGTAAC+GGG + Chr8:77583983-77584002 MsG0880046740.01.T01:intron 50.0%
! TTCAGGTTTGCTCTTGCCCA+AGG - Chr8:77586584-77586603 None:intergenic 50.0%
!! TGATCAATCCGGTTCGGATC+TGG + Chr8:77580648-77580667 MsG0880046740.01.T01:intron 50.0%
ACCATGGGATTAAGGGCAGG+TGG - Chr8:77585423-77585442 None:intergenic 55.0%
ATGAGAACAGCGCTTGGCCA+TGG - Chr8:77586220-77586239 None:intergenic 55.0%
CAGGAACCTATGTGACAGCG+AGG + Chr8:77583838-77583857 MsG0880046740.01.T01:intron 55.0%
CCATGGGATTAAGGGCAGGT+GGG - Chr8:77585422-77585441 None:intergenic 55.0%
CTGGTCCAGATAAGCCAAGC+TGG - Chr8:77586190-77586209 None:intergenic 55.0%
GACAGCGAGGTGCAAAGTCA+GGG + Chr8:77583851-77583870 MsG0880046740.01.T01:intron 55.0%
GAGCTTGAGCAGTGGGATTC+AGG - Chr8:77586601-77586620 None:intergenic 55.0%
GATGATGTGGCACGCTGACA+AGG - Chr8:77583735-77583754 None:intergenic 55.0%
GCTTGGCTTATCTGGACCAG+AGG + Chr8:77586190-77586209 MsG0880046740.01.T01:CDS 55.0%
GGCTTATCTGGACCAGAGGT+TGG + Chr8:77586194-77586213 MsG0880046740.01.T01:CDS 55.0%
GGGTGTAATGGCTGGAGCTA+AGG + Chr8:77586335-77586354 MsG0880046740.01.T01:CDS 55.0%
GGTCTGTTGAGAGGGAGAAG+AGG + Chr8:77585133-77585152 MsG0880046740.01.T01:intron 55.0%
GTGAAGGAAGGCGAGGTTGA+CGG - Chr8:77584824-77584843 None:intergenic 55.0%
TGACAGCGAGGTGCAAAGTC+AGG + Chr8:77583850-77583869 MsG0880046740.01.T01:intron 55.0%
TGAGAGAGTGAAGGAAGGCG+AGG - Chr8:77584831-77584850 None:intergenic 55.0%
! ATGGCCAAGCGCTGTTCTCA+TGG + Chr8:77586219-77586238 MsG0880046740.01.T01:CDS 55.0%
! GCCAAGCTGGTTCTCTCAAG+AGG - Chr8:77586177-77586196 None:intergenic 55.0%
! GCTGAAGTGTGGTGGGACTT+GGG - Chr8:77584908-77584927 None:intergenic 55.0%
! GGATTAAGGGCAGGTGGGTT+AGG - Chr8:77585417-77585436 None:intergenic 55.0%
!! AACAGTGGTGGTGGAAGGGA+CGG - Chr8:77584930-77584949 None:intergenic 55.0%
!! AAGAAGAGGCTTGGTGGTGG+TGG - Chr8:77584760-77584779 None:intergenic 55.0%
!! AGGAAGAAGAGGCTTGGTGG+TGG - Chr8:77584763-77584782 None:intergenic 55.0%
AAGGAAGGCGAGGTTGACGG+TGG - Chr8:77584821-77584840 None:intergenic 60.0%
AAGGGACGGCTGAAGTGTGG+TGG - Chr8:77584916-77584935 None:intergenic 60.0%
AGGGACGGCTGAAGTGTGGT+GGG - Chr8:77584915-77584934 None:intergenic 60.0%
CCCACCTGCCCTTAATCCCA+TGG + Chr8:77585419-77585438 MsG0880046740.01.T01:intron 60.0%
TGGAAGGGACGGCTGAAGTG+TGG - Chr8:77584919-77584938 None:intergenic 60.0%
! GGCTGAAGTGTGGTGGGACT+TGG - Chr8:77584909-77584928 None:intergenic 60.0%
! TCTGGACCAGAGGTTGGCCA+TGG + Chr8:77586200-77586219 MsG0880046740.01.T01:CDS 60.0%
!! GCGCAACAGTGGTGGTGGAA+GGG - Chr8:77584934-77584953 None:intergenic 60.0%
CGACGGTGGTCGGTGAGAGA+AGG - Chr8:77584783-77584802 None:intergenic 65.0%
GCTTGGCCATGGCCAACCTC+TGG - Chr8:77586209-77586228 None:intergenic 65.0%
!! CGCGCAACAGTGGTGGTGGA+AGG - Chr8:77584935-77584954 None:intergenic 65.0%
GAGGTTGACGGTGGCGACGG+TGG - Chr8:77584812-77584831 None:intergenic 70.0%
GGCGAGGTTGACGGTGGCGA+CGG - Chr8:77584815-77584834 None:intergenic 70.0%
GTGGCGCGCAACAGTGGTGG+TGG - Chr8:77584939-77584958 None:intergenic 70.0%
GTGGCGGTGACGACGGTGGT+CGG - Chr8:77584793-77584812 None:intergenic 70.0%
GTTGACGGTGGCGACGGTGG+CGG - Chr8:77584809-77584828 None:intergenic 70.0%
! GGTGTGGTGGCGCGCAACAG+TGG - Chr8:77584945-77584964 None:intergenic 70.0%
! GTGGTGGCGCGCAACAGTGG+TGG - Chr8:77584942-77584961 None:intergenic 70.0%
!! GGTGGTGGTGGTGCTGCTGC+TGG - Chr8:77584748-77584767 None:intergenic 70.0%
! GACGGTGGCGGTGACGACGG+TGG - Chr8:77584797-77584816 None:intergenic 75.0%
! GGCGACGGTGGCGGTGACGA+CGG - Chr8:77584800-77584819 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 77579137 77586640 77579137 ID=MsG0880046740.01;Name=MsG0880046740.01
Chr8 mRNA 77579137 77586640 77579137 ID=MsG0880046740.01.T01;Parent=MsG0880046740.01;Name=MsG0880046740.01.T01;_AED=0.50;_eAED=0.80;_QI=0|0|0|1|1|1|5|0|193
Chr8 exon 77579137 77579355 77579137 ID=MsG0880046740.01.T01:exon:33183;Parent=MsG0880046740.01.T01
Chr8 exon 77579442 77579529 77579442 ID=MsG0880046740.01.T01:exon:33184;Parent=MsG0880046740.01.T01
Chr8 exon 77586109 77586240 77586109 ID=MsG0880046740.01.T01:exon:33185;Parent=MsG0880046740.01.T01
Chr8 exon 77586334 77586395 77586334 ID=MsG0880046740.01.T01:exon:33186;Parent=MsG0880046740.01.T01
Chr8 exon 77586560 77586640 77586560 ID=MsG0880046740.01.T01:exon:33187;Parent=MsG0880046740.01.T01
Chr8 CDS 77579137 77579355 77579137 ID=MsG0880046740.01.T01:cds;Parent=MsG0880046740.01.T01
Chr8 CDS 77579442 77579529 77579442 ID=MsG0880046740.01.T01:cds;Parent=MsG0880046740.01.T01
Chr8 CDS 77586109 77586240 77586109 ID=MsG0880046740.01.T01:cds;Parent=MsG0880046740.01.T01
Chr8 CDS 77586334 77586395 77586334 ID=MsG0880046740.01.T01:cds;Parent=MsG0880046740.01.T01
Chr8 CDS 77586560 77586640 77586560 ID=MsG0880046740.01.T01:cds;Parent=MsG0880046740.01.T01
Gene Sequence

>MsG0880046740.01.T01

ATTTATAATTATGAAGATGTGGTTACTGATTGCAAATCTCACAAGGTTGTTGTTAAAGAAGAAAAAGCGGATCCATTGAAGGTTCTTGAAAGAGTTCAGAGGAAGAGTCATAGACAAGTTGAGCTTCTTTCTCCGATCCCAAAACCACCTTCAGAACAAGAGAAAAAAATTGAAGAGAAAGAGAAACCTAAGCCAGAGGAAGAAAAGAAAGCTGAAGAGCCTAAGGTTATGATAGTGATTCTGAAAGTTCACATGTATTGTGAAGCTTGTTCACAAGATATCAAGAGACGCATTGAGAAAATCAAAGCTTTTGTTCAATTCAATTCAATTGAATCTTTGAAGATGGCCAAGAGAAATGTTGCTGCTAATTCTCCTCTTGAGAGAACCAGCTTGGCTTATCTGGACCAGAGGTTGGCCATGGCCAAGCGCTGTTCTCATGAGGGTGTAATGGCTGGAGCTAAGGCAGCTGTTGTTGCTACTATTGCCACTGCCATTCCAACTCTGGCTAGTGTTAGGATGCTACCTTGGGCAAGAGCAAACCTGAATCCCACTGCTCAAGCTCTCATAATTTCTACAGGTTAG
Protein sequence

>MsG0880046740.01.T01

IYNYEDVVTDCKSHKVVVKEEKADPLKVLERVQRKSHRQVELLSPIPKPPSEQEKKIEEKEKPKPEEEKKAEEPKVMIVILKVHMYCEACSQDIKRRIEKIKAFVQFNSIESLKMAKRNVAANSPLERTSLAYLDQRLAMAKRCSHEGVMAGAKAAVVATIATAIPTLASVRMLPWARANLNPTAQALIISTG*