AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005741.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005741.01.T01 MTR_1g106005 99.778 450 1 0 1 450 1 450 0.0 937
MsG0180005741.01.T01 MTR_3g110720 97.773 449 10 0 1 449 1 449 0.0 914
MsG0180005741.01.T01 MTR_4g097830 97.118 451 12 1 1 450 1 451 0.0 910
MsG0180005741.01.T01 MTR_8g085980 92.644 435 32 0 1 435 1 435 0.0 832
MsG0180005741.01.T01 MTR_7g085800 91.196 443 38 1 1 443 1 442 0.0 827
MsG0180005741.01.T01 MTR_6g029190 83.149 451 72 2 1 450 1 448 0.0 776
MsG0180005741.01.T01 MTR_2g041670 72.829 449 117 2 1 449 1 444 0.0 653
MsG0180005741.01.T01 MTR_2g041400 74.359 429 105 2 1 429 1 424 0.0 640
MsG0180005741.01.T01 MTR_4g094535 41.705 434 243 2 1 434 1 424 4.73e-124 368
MsG0180005741.01.T01 MTR_7g089120 42.105 437 237 4 1 434 1 424 1.41e-123 367
MsG0180005741.01.T01 MTR_4g017630 41.244 434 245 2 1 434 1 424 1.77e-123 367
MsG0180005741.01.T01 MTR_3g113970 40.961 437 244 3 1 434 1 426 2.23e-123 366
MsG0180005741.01.T01 MTR_4g019110 42.105 437 237 3 1 434 1 424 3.83e-123 366
MsG0180005741.01.T01 MTR_4g019090 41.244 434 245 2 1 434 1 424 9.64e-123 365
MsG0180005741.01.T01 MTR_8g107250 41.244 434 246 2 1 434 1 425 1.25e-122 364
MsG0180005741.01.T01 MTR_1g101130 41.244 434 245 2 1 434 1 424 1.66e-122 364
MsG0180005741.01.T01 MTR_2g031310 41.244 434 245 2 1 434 1 424 2.43e-122 363
MsG0180005741.01.T01 MTR_8g098360 39.545 440 256 2 1 440 1 430 4.59e-121 360
MsG0180005741.01.T01 MTR_3g063410 98.052 154 3 0 252 405 24 177 4.54e-111 325
MsG0180005741.01.T01 MTR_3g063410 97.826 138 3 0 268 405 1 138 3.09e-97 289
MsG0180005741.01.T01 MTR_7g117050 31.390 446 283 9 2 433 3 439 3.00e-76 246
MsG0180005741.01.T01 MTR_6g075280 46.875 96 32 1 355 450 608 684 3.34e-16 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005741.01.T01 AT1G04820 96.000 450 18 0 1 450 1 450 0.0 905
MsG0180005741.01.T01 AT1G50010 96.000 450 18 0 1 450 1 450 0.0 905
MsG0180005741.01.T01 AT4G14960 95.778 450 19 0 1 450 1 450 0.0 904
MsG0180005741.01.T01 AT5G19780 93.563 435 28 0 1 435 1 435 0.0 838
MsG0180005741.01.T01 AT5G19770 93.563 435 28 0 1 435 1 435 0.0 838
MsG0180005741.01.T01 AT1G64740 90.115 435 43 0 1 435 1 435 0.0 812
MsG0180005741.01.T01 AT4G14960 93.612 407 19 1 1 407 1 400 0.0 796
MsG0180005741.01.T01 AT1G75780 41.475 434 245 2 1 434 1 425 2.35e-125 371
MsG0180005741.01.T01 AT5G12250 41.648 437 239 4 1 434 1 424 7.80e-124 367
MsG0180005741.01.T01 AT5G62700 41.475 434 244 2 1 434 1 424 1.65e-123 367
MsG0180005741.01.T01 AT5G62690 41.475 434 244 2 1 434 1 424 1.65e-123 367
MsG0180005741.01.T01 AT1G20010 41.014 434 247 2 1 434 1 425 5.93e-123 365
MsG0180005741.01.T01 AT2G29550 41.244 434 245 2 1 434 1 424 9.66e-123 365
MsG0180005741.01.T01 AT4G20890 41.475 434 244 2 1 434 1 424 1.50e-122 364
MsG0180005741.01.T01 AT5G23860 41.244 434 245 2 1 434 1 424 2.06e-122 364
MsG0180005741.01.T01 AT5G23860 41.244 434 245 2 1 434 1 424 2.06e-122 364
MsG0180005741.01.T01 AT5G44340 41.244 434 245 3 1 434 1 424 1.81e-120 359
MsG0180005741.01.T01 AT5G05620 32.063 446 280 9 2 433 3 439 1.79e-77 249
MsG0180005741.01.T01 AT3G61650 31.614 446 282 9 2 433 3 439 3.85e-76 246

Find 160 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGATGTTGCTGTTCTTC+TGG 0.208803 1:-95546168 MsG0180005741.01.T01:CDS
AGAAAGCATGAAATGGATTC+TGG 0.259381 1:+95545852 None:intergenic
ATGAAATGGATTCTGGGATA+TGG 0.263566 1:+95545859 None:intergenic
ACTGCTTCTTTGAGGTTTGA+TGG 0.277274 1:-95545925 MsG0180005741.01.T01:CDS
GAGCGTCTGTCTGTTGATTA+TGG 0.277497 1:-95546296 MsG0180005741.01.T01:CDS
GGAGGAACTGGTTCTGGTCT+TGG 0.278416 1:-95546332 MsG0180005741.01.T01:CDS
TTCTTTGTGTGTTGTTCCTT+TGG 0.303452 1:-95545255 MsG0180005741.01.T01:three_prime_UTR
CATCCTTGACTGCTTCTTTG+AGG 0.310525 1:-95545933 MsG0180005741.01.T01:CDS
CATCGGTCAAGCCGGTATTC+AGG 0.312386 1:-95547764 MsG0180005741.01.T01:CDS
TTTAATTATAAGAAATGCTT+TGG 0.341707 1:+95544964 None:intergenic
CCTCTCCACCCACTCCCTCT+TGG 0.347748 1:-95546195 MsG0180005741.01.T01:CDS
CAAGAGGACCATTCAGTTTG+TGG 0.350369 1:-95545629 MsG0180005741.01.T01:CDS
CAGCCACCTACTGTTGTTCC+TGG 0.350820 1:-95545568 MsG0180005741.01.T01:CDS
GCTTTCTCAGCAGATATAAC+TGG 0.353641 1:+95545820 None:intergenic
GAAAAGTAGATAACCCGTTT+AGG 0.361645 1:+95545177 None:intergenic
CCGGGAGGATCTTGCTGCTT+TGG 0.366612 1:-95545377 MsG0180005741.01.T01:CDS
ATTAGAATATGTTGAATGAT+TGG 0.375475 1:-95545102 MsG0180005741.01.T01:three_prime_UTR
TTCAGGTCGGAAATGCTTGC+TGG 0.378485 1:-95547747 MsG0180005741.01.T01:CDS
CAGTCTTGTCGCTCGGCATT+TGG 0.379031 1:+95546753 None:intergenic
GTTGGAGGAGGAACTGGTTC+TGG 0.384483 1:-95546338 MsG0180005741.01.T01:CDS
TCGCTCGGCATTTGGCCATC+AGG 0.386811 1:+95546761 None:intergenic
TTGCCACTGATGAGCTGCTC+AGG 0.398345 1:+95546590 None:intergenic
AATGCTGTTGGAGGAGGAAC+TGG 0.399457 1:-95546344 MsG0180005741.01.T01:CDS
CTGGTATGTGGGTGAGGGTA+TGG 0.404210 1:-95545422 MsG0180005741.01.T01:CDS
ACGAAGAGAATGAATTGAAA+TGG 0.405887 1:+95547834 None:intergenic
CCTTAACCGTCTTGTTTCTC+AGG 0.406634 1:-95546081 MsG0180005741.01.T01:intron
GAAAAGGATTATGAAGAAGT+TGG 0.409613 1:-95545355 MsG0180005741.01.T01:CDS
TTTGTGGATTGGTGCCCTAC+TGG 0.413566 1:-95545613 MsG0180005741.01.T01:CDS
AGAGATCGTTGATCTGTGTT+TGG 0.419543 1:-95546423 MsG0180005741.01.T01:CDS
AACACCTTCTTCAGCGAGAC+TGG 0.421898 1:-95546707 MsG0180005741.01.T01:CDS
ATGGAAAGAAATCCAAGCTT+GGG 0.425337 1:-95546277 MsG0180005741.01.T01:CDS
ACAAGTGTGGCTGAGGTGTT+TGG 0.429571 1:-95545496 MsG0180005741.01.T01:CDS
CAACATATGTAAGAAACAAT+AGG 0.429846 1:+95545214 None:intergenic
GTTGAATGATTGGATGTTTG+TGG 0.431871 1:-95545092 MsG0180005741.01.T01:three_prime_UTR
TACTGTCTATCCCTCCCCTC+AGG 0.434518 1:-95546252 MsG0180005741.01.T01:CDS
TACGAACGGTGGGTGGGTAA+TGG 0.448762 1:+95548014 None:intergenic
TCAAGAGTCAAGACCTAAAC+GGG 0.449832 1:-95545190 MsG0180005741.01.T01:three_prime_UTR
GGATCTTGCTGCTTTGGAAA+AGG 0.449929 1:-95545371 MsG0180005741.01.T01:CDS
ACGGTTAAGGTTGGTGTAAG+TGG 0.452971 1:+95546094 None:intergenic
GACAGCAGCATTCACATCCT+TGG 0.453229 1:+95545666 None:intergenic
TGCATTTGTTCACTGGTATG+TGG 0.454287 1:-95545434 MsG0180005741.01.T01:CDS
TTCTTCAGCGAGACTGGTGC+TGG 0.455019 1:-95546701 MsG0180005741.01.T01:CDS
CATATGAAGAAAGCATGAAA+TGG 0.460970 1:+95545845 None:intergenic
CACAAACTGAATGGTCCTCT+TGG 0.463910 1:+95545630 None:intergenic
CCTGAGAAACAAGACGGTTA+AGG 0.472342 1:+95546081 None:intergenic
CCAAGCGTGCATTTGTTCAC+TGG 0.476016 1:-95545441 MsG0180005741.01.T01:CDS
TGTTCACTGGTATGTGGGTG+AGG 0.477980 1:-95545428 MsG0180005741.01.T01:CDS
GAAGAAGTTGGTGCCGAGTC+TGG 0.479857 1:-95545343 MsG0180005741.01.T01:CDS
TGAAATGGATTCTGGGATAT+GGG 0.482192 1:+95545860 None:intergenic
ATGACCACGGGCGAAGTTGT+TGG 0.484462 1:+95546556 None:intergenic
AAGCTATCTATGACATCTGC+AGG 0.485194 1:-95546139 MsG0180005741.01.T01:CDS
ATCAAGAGTCAAGACCTAAA+CGG 0.485727 1:-95545191 MsG0180005741.01.T01:three_prime_UTR
GAAAGCATGAAATGGATTCT+GGG 0.486512 1:+95545853 None:intergenic
GTGGGTGAGGGTATGGAAGA+AGG 0.492111 1:-95545415 MsG0180005741.01.T01:CDS
GATATGGGACCAAGTTGGTC+TGG 0.495701 1:+95545875 None:intergenic
GTTGGTTTACGAACGGTGGG+TGG 0.500920 1:+95548007 None:intergenic
AGCATTTCCGACCTGAATAC+CGG 0.501769 1:+95547753 None:intergenic
GGACCATTCAGTTTGTGGAT+TGG 0.503034 1:-95545624 MsG0180005741.01.T01:CDS
TATGGAAAGAAATCCAAGCT+TGG 0.504088 1:-95546278 MsG0180005741.01.T01:CDS
CCAAAGCAGCAAGATCCTCC+CGG 0.504543 1:+95545377 None:intergenic
TTGTGATAATTAACCATGGT+TGG 0.508812 1:+95547989 None:intergenic
TCCTGGTGGTGACCTTGCTA+AGG 0.511101 1:-95545551 MsG0180005741.01.T01:CDS
TGAGGGCGGTGATGAAGATA+TGG 0.511219 1:-95545320 MsG0180005741.01.T01:CDS
CAGTGTGCTCCAAGAGGGAG+TGG 0.513536 1:+95546186 None:intergenic
ACAGCAGCATTCACATCCTT+GGG 0.514766 1:+95545667 None:intergenic
CCAGTGAACAAATGCACGCT+TGG 0.525328 1:+95545441 None:intergenic
CACTTAGCCATCATAGATGA+TGG 0.525506 1:+95545748 None:intergenic
CCCTCGCCATGGAAAGTACA+TGG 0.526872 1:-95545722 MsG0180005741.01.T01:CDS
TTCTTATATGCACAGCCTGA+TGG 0.528986 1:-95546776 MsG0180005741.01.T01:intron
AAACTCAACAAGTGTGGCTG+AGG 0.529684 1:-95545503 MsG0180005741.01.T01:CDS
GTGGAGAGGACACTGTTGTA+TGG 0.536266 1:+95546209 None:intergenic
AGCACCAGTCTCGCTGAAGA+AGG 0.536901 1:+95546703 None:intergenic
GATAACTGCACTGGTCTCCA+AGG 0.539021 1:-95546380 MsG0180005741.01.T01:CDS
AACCATGGTTGGTTTACGAA+CGG 0.539516 1:+95548000 None:intergenic
CCGAGCGACAAGACTGTTGG+AGG 0.543702 1:-95546746 MsG0180005741.01.T01:CDS
TGATGGCTCAAAAGCACTGT+TGG 0.546926 1:+95545765 None:intergenic
GACTGAATTCCAGACCAACT+TGG 0.549713 1:-95545884 MsG0180005741.01.T01:CDS
GCACCAATCCACAAACTGAA+TGG 0.551570 1:+95545621 None:intergenic
GAGGTGGAAACCTGAGGGGA+GGG 0.551933 1:+95546242 None:intergenic
ATAGACAGTAAACCCAAGCT+TGG 0.556586 1:+95546265 None:intergenic
CGGTTAAGGTTGGTGTAAGT+GGG 0.558069 1:+95546095 None:intergenic
CAACAGAGGTGGAAACCTGA+GGG 0.558387 1:+95546237 None:intergenic
AGCAAGCCATGTACTTTCCA+TGG 0.560681 1:+95545716 None:intergenic
TACTGTCTCGAACACGGCAT+CGG 0.561154 1:-95547718 MsG0180005741.01.T01:CDS
TCAGGTCGGAAATGCTTGCT+GGG 0.562273 1:-95547746 MsG0180005741.01.T01:CDS
CAAAGCAGCAAGATCCTCCC+GGG 0.564402 1:+95545378 None:intergenic
GTTATCGATGAGGTGAGGAC+TGG 0.564950 1:-95546635 MsG0180005741.01.T01:CDS
ATGCCGAGCGACAAGACTGT+TGG 0.565365 1:-95546749 MsG0180005741.01.T01:CDS
GTTGGTGCCGAGTCTGGTGA+GGG 0.565547 1:-95545337 MsG0180005741.01.T01:CDS
CCGAGGCGATGTTGTTCCCA+AGG 0.566146 1:-95545683 MsG0180005741.01.T01:CDS
AGCGACAAGACTGTTGGAGG+TGG 0.567132 1:-95546743 MsG0180005741.01.T01:CDS
TCAGTTCACATCGGTCAAGC+CGG 0.567216 1:-95547772 MsG0180005741.01.T01:CDS
AAACCTCAAAGAAGCAGTCA+AGG 0.571224 1:+95545930 None:intergenic
AAGCTTGCTGATAACTGCAC+TGG 0.572122 1:-95546389 MsG0180005741.01.T01:CDS
TCAGATCTAGATCTAGAAGA+AGG 0.572931 1:-95547897 MsG0180005741.01.T01:five_prime_UTR
CACTGATGAGCTGCTCAGGA+TGG 0.573952 1:+95546594 None:intergenic
ACCACGGGCGAAGTTGTTGG+CGG 0.576233 1:+95546559 None:intergenic
TGCCCTACTGGTTTCAAGTG+TGG 0.577249 1:-95545601 MsG0180005741.01.T01:CDS
GCATTTGTTCACTGGTATGT+GGG 0.578176 1:-95545433 MsG0180005741.01.T01:CDS
GCTGCTCAGGATGGAAGAGT+TGG 0.579720 1:+95546603 None:intergenic
ATCACCGCCCTCACCAGACT+CGG 0.580489 1:+95545330 None:intergenic
GCCATGTACTTTCCATGGCG+AGG 0.586030 1:+95545721 None:intergenic
CATGAAAACAATTCATCCAA+AGG 0.590994 1:+95545239 None:intergenic
TTGGTTTACGAACGGTGGGT+GGG 0.592081 1:+95548008 None:intergenic
ACCTTAGCAAGGTCACCACC+AGG 0.592703 1:+95545550 None:intergenic
GTTCACTGGTATGTGGGTGA+GGG 0.594621 1:-95545427 MsG0180005741.01.T01:CDS
CCATGTACTTTCCATGGCGA+GGG 0.595056 1:+95545722 None:intergenic
ATGGTTGGTTTACGAACGGT+GGG 0.597218 1:+95548004 None:intergenic
AGTTGGTGCCGAGTCTGGTG+AGG 0.599254 1:-95545338 MsG0180005741.01.T01:CDS
CATGGTTGGTTTACGAACGG+TGG 0.599944 1:+95548003 None:intergenic
GTGCTCCAAGAGGGAGTGGG+TGG 0.600125 1:+95546190 None:intergenic
AGTGGGACGCTCAATGTCGA+GGG 0.600615 1:+95546112 None:intergenic
GCCGCCAACAACTTCGCCCG+TGG 0.600730 1:-95546560 MsG0180005741.01.T01:CDS
AAGTGGGACGCTCAATGTCG+AGG 0.610089 1:+95546111 None:intergenic
GATCTAGATCTGATTATGAG+AGG 0.611018 1:+95547907 None:intergenic
CATCCTGAGCAGCTCATCAG+TGG 0.614786 1:-95546593 MsG0180005741.01.T01:CDS
ACAACAGAGGTGGAAACCTG+AGG 0.615914 1:+95546236 None:intergenic
TATCAGCAAGCTTTCTGATG+CGG 0.616085 1:+95546399 None:intergenic
CTGCCCTCTGTACCTTAGCA+AGG 0.618015 1:+95545539 None:intergenic
ATAACTGCACTGGTCTCCAA+GGG 0.620138 1:-95546379 MsG0180005741.01.T01:CDS
GCTAAGTGTGACCCTCGCCA+TGG 0.621505 1:-95545733 MsG0180005741.01.T01:CDS
CCAAGAGGGAGTGGGTGGAG+AGG 0.621744 1:+95546195 None:intergenic
CTCACCTCATCGATAACAGT+GGG 0.621848 1:+95546641 None:intergenic
AACATCAGTGTGCTCCAAGA+GGG 0.623268 1:+95546181 None:intergenic
ATACCACACTTGAAACCAGT+AGG 0.623812 1:+95545598 None:intergenic
AGAAACAAGACGGTTAAGGT+TGG 0.623820 1:+95546085 None:intergenic
CACCGTTCGTAAACCAACCA+TGG 0.624077 1:-95548002 MsG0180005741.01.T01:five_prime_UTR
CCTCCAACAGTCTTGTCGCT+CGG 0.624881 1:+95546746 None:intergenic
CCACCTACTGTTGTTCCTGG+TGG 0.628220 1:-95545565 MsG0180005741.01.T01:CDS
TCACCACCAGGAACAACAGT+AGG 0.629041 1:+95545562 None:intergenic
TCTGGGATATGGGACCAAGT+TGG 0.629717 1:+95545870 None:intergenic
AGAGGTGGAAACCTGAGGGG+AGG 0.631975 1:+95546241 None:intergenic
TGAATTGAAATGGAACGAAG+AGG 0.632334 1:+95547844 None:intergenic
AGGATGGAAGAGTTGGCGAT+AGG 0.639504 1:+95546610 None:intergenic
GAGCTTTACTGTCTCGAACA+CGG 0.642769 1:-95547724 MsG0180005741.01.T01:CDS
CCTTGGGAACAACATCGCCT+CGG 0.644372 1:+95545683 None:intergenic
AGTGTGCTCCAAGAGGGAGT+GGG 0.645027 1:+95546187 None:intergenic
AATCAACAGACAGACGCTCA+AGG 0.649850 1:+95546300 None:intergenic
GATTTCAAACTCAACAAGTG+TGG 0.651909 1:-95545509 MsG0180005741.01.T01:CDS
TGACCTTGCTAAGGTACAGA+GGG 0.652678 1:-95545542 MsG0180005741.01.T01:CDS
CATACTGGTATAATGACCAC+GGG 0.654535 1:+95546544 None:intergenic
CAACATCAGTGTGCTCCAAG+AGG 0.655535 1:+95546180 None:intergenic
GATTGGATGTTTGTGGACCG+TGG 0.657662 1:-95545085 MsG0180005741.01.T01:three_prime_UTR
TACCACACTTGAAACCAGTA+GGG 0.657871 1:+95545599 None:intergenic
CCACCAGGAACAACAGTAGG+TGG 0.665309 1:+95545565 None:intergenic
GTGACCTTGCTAAGGTACAG+AGG 0.667763 1:-95545543 MsG0180005741.01.T01:CDS
ACATACTGGTATAATGACCA+CGG 0.669902 1:+95546543 None:intergenic
GGTGCCGAGTCTGGTGAGGG+CGG 0.669914 1:-95545334 MsG0180005741.01.T01:CDS
GTATGGCTCAACAACAGAGG+TGG 0.674184 1:+95546226 None:intergenic
GGTCAAGCCGGTATTCAGGT+CGG 0.675515 1:-95547760 MsG0180005741.01.T01:CDS
TGAGCCCACTGTTATCGATG+AGG 0.676846 1:-95546645 MsG0180005741.01.T01:CDS
TCGCTACAATCAAAACCAAG+AGG 0.680258 1:-95545645 MsG0180005741.01.T01:CDS
TAGCTACCTGAGAAACAAGA+CGG 0.682350 1:+95546075 None:intergenic
CCACTGTTATCGATGAGGTG+AGG 0.685674 1:-95546640 MsG0180005741.01.T01:CDS
GTCATTGTGATAATTAACCA+TGG 0.686546 1:+95547985 None:intergenic
CCTCACCTCATCGATAACAG+TGG 0.687640 1:+95546640 None:intergenic
GAGTGCATTTCAGTTCACAT+CGG 0.696942 1:-95547781 MsG0180005741.01.T01:CDS
GTTGTATGGCTCAACAACAG+AGG 0.698181 1:+95546223 None:intergenic
GCTTGCTGTTTGATGTACCG+AGG 0.704934 1:-95545700 MsG0180005741.01.T01:CDS
AACAGAGGTGGAAACCTGAG+GGG 0.715815 1:+95546238 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATAAAATTGAAAAAATAA+CGG + Chr1:95545449-95545468 None:intergenic 10.0%
!! ATTAGAATATGTTGAATGAT+TGG - Chr1:95547904-95547923 MsG0180005741.01.T01:five_prime_UTR 20.0%
!! TCTGTTTATGAGTTAATATA+TGG - Chr1:95545810-95545829 MsG0180005741.01.T01:CDS 20.0%
!! TTACATAACCTAATAACAAA+CGG + Chr1:95545636-95545655 None:intergenic 20.0%
!! TTACATAACCTAATAACATA+CGG + Chr1:95545979-95545998 None:intergenic 20.0%
!!! TTCTAATGATTTTAGATAAG+AGG + Chr1:95547891-95547910 None:intergenic 20.0%
! AACAATCAACAATTGAAAAG+TGG + Chr1:95546065-95546084 None:intergenic 25.0%
! AGTATCAAACTTCAATTGAA+TGG + Chr1:95546126-95546145 None:intergenic 25.0%
! ATATATGTTATCTATGTTCG+TGG - Chr1:95545942-95545961 MsG0180005741.01.T01:CDS 25.0%
! ATCAAATTTAGAAACAATGC+TGG + Chr1:95545489-95545508 None:intergenic 25.0%
! ATCACAAATGAGTAATAATG+TGG + Chr1:95546504-95546523 None:intergenic 25.0%
! CAACATATGTAAGAAACAAT+AGG + Chr1:95547795-95547814 None:intergenic 25.0%
! TATTAGATCCGTATGTTATT+AGG - Chr1:95545968-95545987 MsG0180005741.01.T01:intron 25.0%
! TCAATTGAAGTTTGATACTA+TGG - Chr1:95546127-95546146 MsG0180005741.01.T01:CDS 25.0%
! TGTAATATTTATGAAATCGC+TGG - Chr1:95545575-95545594 MsG0180005741.01.T01:CDS 25.0%
! TTATTTCAAGAGCTCATATA+TGG - Chr1:95546206-95546225 MsG0180005741.01.T01:CDS 25.0%
! TTTCCTTAGATCTGAAAAAT+AGG + Chr1:95545421-95545440 None:intergenic 25.0%
!!! AATTTGTGTTACTTTCAGTT+GGG - Chr1:95546558-95546577 MsG0180005741.01.T01:CDS 25.0%
!!! ATTTTCCATGTTGACTTAAT+CGG - Chr1:95545507-95545526 MsG0180005741.01.T01:CDS 25.0%
!!! CTTTGTTTTTGATTGTTTTC+AGG - Chr1:95547044-95547063 MsG0180005741.01.T01:intron 25.0%
!!! GAATTTTTGTTTGAATCTTG+CGG - Chr1:95545679-95545698 MsG0180005741.01.T01:CDS 25.0%
!!! GTGTGAGTTTTATTTATAGA+GGG + Chr1:95545069-95545088 None:intergenic 25.0%
!!! GTTGTTTTGTTATGTTATCT+TGG - Chr1:95545881-95545900 MsG0180005741.01.T01:CDS 25.0%
!!! TAATTTGTGTTACTTTCAGT+TGG - Chr1:95546557-95546576 MsG0180005741.01.T01:CDS 25.0%
!!! TGTGTGAGTTTTATTTATAG+AGG + Chr1:95545070-95545089 None:intergenic 25.0%
AAATCTGAACGAAAATGGAA+TGG + Chr1:95545343-95545362 None:intergenic 30.0%
ACAATTCTGATTGTGAATTG+CGG - Chr1:95546973-95546992 MsG0180005741.01.T01:intron 30.0%
ACGAAGAGAATGAATTGAAA+TGG + Chr1:95545175-95545194 None:intergenic 30.0%
ATCACAAATCTGAACGAAAA+TGG + Chr1:95545348-95545367 None:intergenic 30.0%
CATGAAAACAATTCATCCAA+AGG + Chr1:95547770-95547789 None:intergenic 30.0%
GAAAAGGATTATGAAGAAGT+TGG - Chr1:95547651-95547670 MsG0180005741.01.T01:intron 30.0%
GTCATTGTGATAATTAACCA+TGG + Chr1:95545024-95545043 None:intergenic 30.0%
TTGTGATAATTAACCATGGT+TGG + Chr1:95545020-95545039 None:intergenic 30.0%
! CATATGAAGAAAGCATGAAA+TGG + Chr1:95547164-95547183 None:intergenic 30.0%
!! GTTCCTATTTTTCAGATCTA+AGG - Chr1:95545415-95545434 MsG0180005741.01.T01:CDS 30.0%
!! TAGTAGATCCGTTTGTTATT+AGG - Chr1:95545625-95545644 MsG0180005741.01.T01:CDS 30.0%
!!! TTTTTGGTTTTCAATGCTGT+TGG - Chr1:95546650-95546669 MsG0180005741.01.T01:CDS 30.0%
AAGATCTACAAAAACAGCAC+GGG + Chr1:95546342-95546361 None:intergenic 35.0%
ACATACTGGTATAATGACCA+CGG + Chr1:95546466-95546485 None:intergenic 35.0%
ATCAAGAGTCAAGACCTAAA+CGG - Chr1:95547815-95547834 MsG0180005741.01.T01:five_prime_UTR 35.0%
ATGGAAAGAAATCCAAGCTT+GGG - Chr1:95546729-95546748 MsG0180005741.01.T01:CDS 35.0%
CAAGATCTACAAAAACAGCA+CGG + Chr1:95546343-95546362 None:intergenic 35.0%
CATTGAAAACCAAAAACCCT+TGG + Chr1:95546646-95546665 None:intergenic 35.0%
GAAAAGTAGATAACCCGTTT+AGG + Chr1:95547832-95547851 None:intergenic 35.0%
GATCTAGATCTGATTATGAG+AGG + Chr1:95545102-95545121 None:intergenic 35.0%
GATTTCAAACTCAACAAGTG+TGG - Chr1:95547497-95547516 MsG0180005741.01.T01:intron 35.0%
GTTGAATGATTGGATGTTTG+TGG - Chr1:95547914-95547933 MsG0180005741.01.T01:five_prime_UTR 35.0%
TATGGAAAGAAATCCAAGCT+TGG - Chr1:95546728-95546747 MsG0180005741.01.T01:CDS 35.0%
TCAGATCTAGATCTAGAAGA+AGG - Chr1:95545109-95545128 MsG0180005741.01.T01:three_prime_UTR 35.0%
TGAATTGAAATGGAACGAAG+AGG + Chr1:95545165-95545184 None:intergenic 35.0%
TTTGTGATATGCGTTTCTCT+AGG - Chr1:95545360-95545379 MsG0180005741.01.T01:CDS 35.0%
! AGAAAGCATGAAATGGATTC+TGG + Chr1:95547157-95547176 None:intergenic 35.0%
! GAAAGCATGAAATGGATTCT+GGG + Chr1:95547156-95547175 None:intergenic 35.0%
! TCATTTTCTAAACACAGCCA+CGG + Chr1:95547941-95547960 None:intergenic 35.0%
! TTCTTTGTGTGTTGTTCCTT+TGG - Chr1:95547751-95547770 MsG0180005741.01.T01:CDS 35.0%
! TTTTGAGCCATCATCTATGA+TGG - Chr1:95547251-95547270 MsG0180005741.01.T01:intron 35.0%
!! ATGAAATGGATTCTGGGATA+TGG + Chr1:95547150-95547169 None:intergenic 35.0%
!! TGAAATGGATTCTGGGATAT+GGG + Chr1:95547149-95547168 None:intergenic 35.0%
AAACCTCAAAGAAGCAGTCA+AGG + Chr1:95547079-95547098 None:intergenic 40.0%
AAGCTATCTATGACATCTGC+AGG - Chr1:95546867-95546886 MsG0180005741.01.T01:intron 40.0%
AGAAACAAGACGGTTAAGGT+TGG + Chr1:95546924-95546943 None:intergenic 40.0%
AGAGATCGTTGATCTGTGTT+TGG - Chr1:95546583-95546602 MsG0180005741.01.T01:CDS 40.0%
AGATCTACAAAAACAGCACG+GGG + Chr1:95546341-95546360 None:intergenic 40.0%
ATACCACACTTGAAACCAGT+AGG + Chr1:95547411-95547430 None:intergenic 40.0%
ATAGACAGTAAACCCAAGCT+TGG + Chr1:95546744-95546763 None:intergenic 40.0%
CACTTAGCCATCATAGATGA+TGG + Chr1:95547261-95547280 None:intergenic 40.0%
CAGATCCGATTAAGTCAACA+TGG + Chr1:95545515-95545534 None:intergenic 40.0%
CATACTGGTATAATGACCAC+GGG + Chr1:95546465-95546484 None:intergenic 40.0%
GAGTGCATTTCAGTTCACAT+CGG - Chr1:95545225-95545244 MsG0180005741.01.T01:three_prime_UTR 40.0%
GCATTTGTTCACTGGTATGT+GGG - Chr1:95547573-95547592 MsG0180005741.01.T01:intron 40.0%
GCTTTCTCAGCAGATATAAC+TGG + Chr1:95547189-95547208 None:intergenic 40.0%
TACCACACTTGAAACCAGTA+GGG + Chr1:95547410-95547429 None:intergenic 40.0%
TAGCTACCTGAGAAACAAGA+CGG + Chr1:95546934-95546953 None:intergenic 40.0%
TATCAGCAAGCTTTCTGATG+CGG + Chr1:95546610-95546629 None:intergenic 40.0%
TCAAGAGTCAAGACCTAAAC+GGG - Chr1:95547816-95547835 MsG0180005741.01.T01:five_prime_UTR 40.0%
TCGCTACAATCAAAACCAAG+AGG - Chr1:95547361-95547380 MsG0180005741.01.T01:intron 40.0%
TGCATTTGTTCACTGGTATG+TGG - Chr1:95547572-95547591 MsG0180005741.01.T01:intron 40.0%
TTCTTATATGCACAGCCTGA+TGG - Chr1:95546230-95546249 MsG0180005741.01.T01:CDS 40.0%
! CTCTCATTTTCGCTGATCAA+AGG + Chr1:95545206-95545225 None:intergenic 40.0%
!! AACCATGGTTGGTTTACGAA+CGG + Chr1:95545009-95545028 None:intergenic 40.0%
!! ACTGCTTCTTTGAGGTTTGA+TGG - Chr1:95547081-95547100 MsG0180005741.01.T01:intron 40.0%
!! TTGGTTTTCAATGCTGTTGG+AGG - Chr1:95546653-95546672 MsG0180005741.01.T01:CDS 40.0%
!!! AAGGAGAATTTTCTGAAGCC+CGG - Chr1:95547610-95547629 MsG0180005741.01.T01:intron 40.0%
AAACTCAACAAGTGTGGCTG+AGG - Chr1:95547503-95547522 MsG0180005741.01.T01:intron 45.0%
AACATCAGTGTGCTCCAAGA+GGG + Chr1:95546828-95546847 None:intergenic 45.0%
AATCAACAGACAGACGCTCA+AGG + Chr1:95546709-95546728 None:intergenic 45.0%
ACAGCAGCATTCACATCCTT+GGG + Chr1:95547342-95547361 None:intergenic 45.0%
AGCAAGCCATGTACTTTCCA+TGG + Chr1:95547293-95547312 None:intergenic 45.0%
AGCATTTCCGACCTGAATAC+CGG + Chr1:95545256-95545275 None:intergenic 45.0%
CAAGAGGACCATTCAGTTTG+TGG - Chr1:95547377-95547396 MsG0180005741.01.T01:intron 45.0%
CACAAACTGAATGGTCCTCT+TGG + Chr1:95547379-95547398 None:intergenic 45.0%
CATCCTTGACTGCTTCTTTG+AGG - Chr1:95547073-95547092 MsG0180005741.01.T01:intron 45.0%
CCTGAGAAACAAGACGGTTA+AGG + Chr1:95546928-95546947 None:intergenic 45.0%
CTCACCTCATCGATAACAGT+GGG + Chr1:95546368-95546387 None:intergenic 45.0%
GACTGAATTCCAGACCAACT+TGG - Chr1:95547122-95547141 MsG0180005741.01.T01:intron 45.0%
GAGCTTTACTGTCTCGAACA+CGG - Chr1:95545282-95545301 MsG0180005741.01.T01:three_prime_UTR 45.0%
GATCTACAAAAACAGCACGG+GGG + Chr1:95546340-95546359 None:intergenic 45.0%
GCACCAATCCACAAACTGAA+TGG + Chr1:95547388-95547407 None:intergenic 45.0%
GGACCATTCAGTTTGTGGAT+TGG - Chr1:95547382-95547401 MsG0180005741.01.T01:intron 45.0%
GTTGCGAGTTAGAGACATAC+TGG + Chr1:95546480-95546499 None:intergenic 45.0%
GTTGTATGGCTCAACAACAG+AGG + Chr1:95546786-95546805 None:intergenic 45.0%
TGACCTTGCTAAGGTACAGA+GGG - Chr1:95547464-95547483 MsG0180005741.01.T01:intron 45.0%
! ATAACTGCACTGGTCTCCAA+GGG - Chr1:95546627-95546646 MsG0180005741.01.T01:CDS 45.0%
! CACTGATGTTGCTGTTCTTC+TGG - Chr1:95546838-95546857 MsG0180005741.01.T01:intron 45.0%
! GAGCGTCTGTCTGTTGATTA+TGG - Chr1:95546710-95546729 MsG0180005741.01.T01:CDS 45.0%
! GTTTTCAATGCTGTTGGAGG+AGG - Chr1:95546656-95546675 MsG0180005741.01.T01:CDS 45.0%
!! AAGCTTGCTGATAACTGCAC+TGG - Chr1:95546617-95546636 MsG0180005741.01.T01:CDS 45.0%
!! ACGGTTAAGGTTGGTGTAAG+TGG + Chr1:95546915-95546934 None:intergenic 45.0%
!! ATGGTTGGTTTACGAACGGT+GGG + Chr1:95545005-95545024 None:intergenic 45.0%
!! CCTTAACCGTCTTGTTTCTC+AGG - Chr1:95546925-95546944 MsG0180005741.01.T01:intron 45.0%
!! CGGTTAAGGTTGGTGTAAGT+GGG + Chr1:95546914-95546933 None:intergenic 45.0%
!! GGATCTTGCTGCTTTGGAAA+AGG - Chr1:95547635-95547654 MsG0180005741.01.T01:intron 45.0%
!! TGATGGCTCAAAAGCACTGT+TGG + Chr1:95547244-95547263 None:intergenic 45.0%
!!! AGGAGAATTTTCTGAAGCCC+GGG - Chr1:95547611-95547630 MsG0180005741.01.T01:intron 45.0%
AACACCTTCTTCAGCGAGAC+TGG - Chr1:95546299-95546318 MsG0180005741.01.T01:CDS 50.0%
AACAGAGGTGGAAACCTGAG+GGG + Chr1:95546771-95546790 None:intergenic 50.0%
AATGCTGTTGGAGGAGGAAC+TGG - Chr1:95546662-95546681 MsG0180005741.01.T01:CDS 50.0%
ACAACAGAGGTGGAAACCTG+AGG + Chr1:95546773-95546792 None:intergenic 50.0%
AGGATGGAAGAGTTGGCGAT+AGG + Chr1:95546399-95546418 None:intergenic 50.0%
CAACAGAGGTGGAAACCTGA+GGG + Chr1:95546772-95546791 None:intergenic 50.0%
CAACATCAGTGTGCTCCAAG+AGG + Chr1:95546829-95546848 None:intergenic 50.0%
CACCGTTCGTAAACCAACCA+TGG - Chr1:95545004-95545023 MsG0180005741.01.T01:three_prime_UTR 50.0%
CCAAGCGTGCATTTGTTCAC+TGG - Chr1:95547565-95547584 MsG0180005741.01.T01:intron 50.0%
CCACTGTTATCGATGAGGTG+AGG - Chr1:95546366-95546385 MsG0180005741.01.T01:CDS 50.0%
CCAGTGAACAAATGCACGCT+TGG + Chr1:95547568-95547587 None:intergenic 50.0%
CCATGTACTTTCCATGGCGA+GGG + Chr1:95547287-95547306 None:intergenic 50.0%
CCTCACCTCATCGATAACAG+TGG + Chr1:95546369-95546388 None:intergenic 50.0%
GACAGCAGCATTCACATCCT+TGG + Chr1:95547343-95547362 None:intergenic 50.0%
GATTGGATGTTTGTGGACCG+TGG - Chr1:95547921-95547940 MsG0180005741.01.T01:five_prime_UTR 50.0%
GTATGGCTCAACAACAGAGG+TGG + Chr1:95546783-95546802 None:intergenic 50.0%
GTGACCTTGCTAAGGTACAG+AGG - Chr1:95547463-95547482 MsG0180005741.01.T01:intron 50.0%
GTGGAGAGGACACTGTTGTA+TGG + Chr1:95546800-95546819 None:intergenic 50.0%
GTTATCGATGAGGTGAGGAC+TGG - Chr1:95546371-95546390 MsG0180005741.01.T01:CDS 50.0%
GTTCACTGGTATGTGGGTGA+GGG - Chr1:95547579-95547598 MsG0180005741.01.T01:intron 50.0%
TACTGTCTCGAACACGGCAT+CGG - Chr1:95545288-95545307 MsG0180005741.01.T01:three_prime_UTR 50.0%
TCACCACCAGGAACAACAGT+AGG + Chr1:95547447-95547466 None:intergenic 50.0%
TCAGGTCGGAAATGCTTGCT+GGG - Chr1:95545260-95545279 MsG0180005741.01.T01:three_prime_UTR 50.0%
TCAGTTCACATCGGTCAAGC+CGG - Chr1:95545234-95545253 MsG0180005741.01.T01:three_prime_UTR 50.0%
TGAGCCCACTGTTATCGATG+AGG - Chr1:95546361-95546380 MsG0180005741.01.T01:CDS 50.0%
TGAGGGCGGTGATGAAGATA+TGG - Chr1:95547686-95547705 MsG0180005741.01.T01:intron 50.0%
TGTTCACTGGTATGTGGGTG+AGG - Chr1:95547578-95547597 MsG0180005741.01.T01:intron 50.0%
TTCAGGTCGGAAATGCTTGC+TGG - Chr1:95545259-95545278 MsG0180005741.01.T01:three_prime_UTR 50.0%
TTGGTTTACGAACGGTGGGT+GGG + Chr1:95545001-95545020 None:intergenic 50.0%
! ACAAGTGTGGCTGAGGTGTT+TGG - Chr1:95547510-95547529 MsG0180005741.01.T01:intron 50.0%
! GATAACTGCACTGGTCTCCA+AGG - Chr1:95546626-95546645 MsG0180005741.01.T01:CDS 50.0%
! TCTGGGATATGGGACCAAGT+TGG + Chr1:95547139-95547158 None:intergenic 50.0%
!! CACTGGTCTCCAAGGGTTTT+TGG - Chr1:95546634-95546653 MsG0180005741.01.T01:CDS 50.0%
!! CATGGTTGGTTTACGAACGG+TGG + Chr1:95545006-95545025 None:intergenic 50.0%
!! GATATGGGACCAAGTTGGTC+TGG + Chr1:95547134-95547153 None:intergenic 50.0%
!! GCTTGCTGTTTGATGTACCG+AGG - Chr1:95547306-95547325 MsG0180005741.01.T01:intron 50.0%
!! TGCCCTACTGGTTTCAAGTG+TGG - Chr1:95547405-95547424 MsG0180005741.01.T01:intron 50.0%
!! TTTGTGGATTGGTGCCCTAC+TGG - Chr1:95547393-95547412 MsG0180005741.01.T01:intron 50.0%
!!! AGAATTTTCTGAAGCCCGGG+AGG - Chr1:95547614-95547633 MsG0180005741.01.T01:intron 50.0%
AAGTGGGACGCTCAATGTCG+AGG + Chr1:95546898-95546917 None:intergenic 55.0%
ACCTTAGCAAGGTCACCACC+AGG + Chr1:95547459-95547478 None:intergenic 55.0%
AGCACCAGTCTCGCTGAAGA+AGG + Chr1:95546306-95546325 None:intergenic 55.0%
AGCGACAAGACTGTTGGAGG+TGG - Chr1:95546263-95546282 MsG0180005741.01.T01:CDS 55.0%
AGTGGGACGCTCAATGTCGA+GGG + Chr1:95546897-95546916 None:intergenic 55.0%
AGTGTGCTCCAAGAGGGAGT+GGG + Chr1:95546822-95546841 None:intergenic 55.0%
ATGACCACGGGCGAAGTTGT+TGG + Chr1:95546453-95546472 None:intergenic 55.0%
ATGCCGAGCGACAAGACTGT+TGG - Chr1:95546257-95546276 MsG0180005741.01.T01:CDS 55.0%
CAAAGCAGCAAGATCCTCCC+GGG + Chr1:95547631-95547650 None:intergenic 55.0%
CACTGATGAGCTGCTCAGGA+TGG + Chr1:95546415-95546434 None:intergenic 55.0%
CAGCCACCTACTGTTGTTCC+TGG - Chr1:95547438-95547457 MsG0180005741.01.T01:intron 55.0%
CATCCTGAGCAGCTCATCAG+TGG - Chr1:95546413-95546432 MsG0180005741.01.T01:CDS 55.0%
CATCGGTCAAGCCGGTATTC+AGG - Chr1:95545242-95545261 MsG0180005741.01.T01:three_prime_UTR 55.0%
CCAAAGCAGCAAGATCCTCC+CGG + Chr1:95547632-95547651 None:intergenic 55.0%
CCACCAGGAACAACAGTAGG+TGG + Chr1:95547444-95547463 None:intergenic 55.0%
CCACCTACTGTTGTTCCTGG+TGG - Chr1:95547441-95547460 MsG0180005741.01.T01:intron 55.0%
CCTTGGGAACAACATCGCCT+CGG + Chr1:95547326-95547345 None:intergenic 55.0%
CTGCCCTCTGTACCTTAGCA+AGG + Chr1:95547470-95547489 None:intergenic 55.0%
CTGGTATGTGGGTGAGGGTA+TGG - Chr1:95547584-95547603 MsG0180005741.01.T01:intron 55.0%
GCCATGTACTTTCCATGGCG+AGG + Chr1:95547288-95547307 None:intergenic 55.0%
GCTGCTCAGGATGGAAGAGT+TGG + Chr1:95546406-95546425 None:intergenic 55.0%
GGTCAAGCCGGTATTCAGGT+CGG - Chr1:95545246-95545265 MsG0180005741.01.T01:three_prime_UTR 55.0%
TACGAACGGTGGGTGGGTAA+TGG + Chr1:95544995-95545014 None:intergenic 55.0%
TACTGTCTATCCCTCCCCTC+AGG - Chr1:95546754-95546773 MsG0180005741.01.T01:CDS 55.0%
TTCTTCAGCGAGACTGGTGC+TGG - Chr1:95546305-95546324 MsG0180005741.01.T01:CDS 55.0%
TTGCCACTGATGAGCTGCTC+AGG + Chr1:95546419-95546438 None:intergenic 55.0%
! CAGTCTTGTCGCTCGGCATT+TGG + Chr1:95546256-95546275 None:intergenic 55.0%
! CCCTCGCCATGGAAAGTACA+TGG - Chr1:95547284-95547303 MsG0180005741.01.T01:intron 55.0%
! CCTCCAACAGTCTTGTCGCT+CGG + Chr1:95546263-95546282 None:intergenic 55.0%
! GTGGGTGAGGGTATGGAAGA+AGG - Chr1:95547591-95547610 MsG0180005741.01.T01:intron 55.0%
! GTTGGAGGAGGAACTGGTTC+TGG - Chr1:95546668-95546687 MsG0180005741.01.T01:CDS 55.0%
! GTTGGTTTACGAACGGTGGG+TGG + Chr1:95545002-95545021 None:intergenic 55.0%
! TCCTGGTGGTGACCTTGCTA+AGG - Chr1:95547455-95547474 MsG0180005741.01.T01:intron 55.0%
!! GAAGAAGTTGGTGCCGAGTC+TGG - Chr1:95547663-95547682 MsG0180005741.01.T01:intron 55.0%
!! GGAGGAACTGGTTCTGGTCT+TGG - Chr1:95546674-95546693 MsG0180005741.01.T01:CDS 55.0%
ACCACGGGCGAAGTTGTTGG+CGG + Chr1:95546450-95546469 None:intergenic 60.0%
AGAGGTGGAAACCTGAGGGG+AGG + Chr1:95546768-95546787 None:intergenic 60.0%
ATCACCGCCCTCACCAGACT+CGG + Chr1:95547679-95547698 None:intergenic 60.0%
CAGTGTGCTCCAAGAGGGAG+TGG + Chr1:95546823-95546842 None:intergenic 60.0%
CCGAGCGACAAGACTGTTGG+AGG - Chr1:95546260-95546279 MsG0180005741.01.T01:CDS 60.0%
CCGAGGCGATGTTGTTCCCA+AGG - Chr1:95547323-95547342 MsG0180005741.01.T01:intron 60.0%
GAGGTGGAAACCTGAGGGGA+GGG + Chr1:95546767-95546786 None:intergenic 60.0%
GCTAAGTGTGACCCTCGCCA+TGG - Chr1:95547273-95547292 MsG0180005741.01.T01:intron 60.0%
TCGCTCGGCATTTGGCCATC+AGG + Chr1:95546248-95546267 None:intergenic 60.0%
! CCGGGAGGATCTTGCTGCTT+TGG - Chr1:95547629-95547648 MsG0180005741.01.T01:intron 60.0%
!! AGTTGGTGCCGAGTCTGGTG+AGG - Chr1:95547668-95547687 MsG0180005741.01.T01:intron 60.0%
!! GTTGGTGCCGAGTCTGGTGA+GGG - Chr1:95547669-95547688 MsG0180005741.01.T01:intron 60.0%
CCAAGAGGGAGTGGGTGGAG+AGG + Chr1:95546814-95546833 None:intergenic 65.0%
CCTCTCCACCCACTCCCTCT+TGG - Chr1:95546811-95546830 MsG0180005741.01.T01:intron 65.0%
GTGCTCCAAGAGGGAGTGGG+TGG + Chr1:95546819-95546838 None:intergenic 65.0%
GCCGCCAACAACTTCGCCCG+TGG - Chr1:95546446-95546465 MsG0180005741.01.T01:intron 70.0%
! GGTGCCGAGTCTGGTGAGGG+CGG - Chr1:95547672-95547691 MsG0180005741.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 95544971 95548057 95544971 ID=MsG0180005741.01;Name=MsG0180005741.01
Chr1 mRNA 95544971 95548057 95544971 ID=MsG0180005741.01.T01;Parent=MsG0180005741.01;Name=MsG0180005741.01.T01;_AED=0.19;_eAED=0.19;_QI=248|1|1|1|1|1|4|338|450
Chr1 exon 95544971 95545962 95544971 ID=MsG0180005741.01.T01:exon:50322;Parent=MsG0180005741.01.T01
Chr1 exon 95546082 95546452 95546082 ID=MsG0180005741.01.T01:exon:50321;Parent=MsG0180005741.01.T01
Chr1 exon 95546549 95546783 95546549 ID=MsG0180005741.01.T01:exon:50320;Parent=MsG0180005741.01.T01
Chr1 exon 95547717 95548057 95547717 ID=MsG0180005741.01.T01:exon:50319;Parent=MsG0180005741.01.T01
Chr1 five_prime_UTR 95547810 95548057 95547810 ID=MsG0180005741.01.T01:five_prime_utr;Parent=MsG0180005741.01.T01
Chr1 CDS 95547717 95547809 95547717 ID=MsG0180005741.01.T01:cds;Parent=MsG0180005741.01.T01
Chr1 CDS 95546549 95546783 95546549 ID=MsG0180005741.01.T01:cds;Parent=MsG0180005741.01.T01
Chr1 CDS 95546082 95546452 95546082 ID=MsG0180005741.01.T01:cds;Parent=MsG0180005741.01.T01
Chr1 CDS 95545309 95545962 95545309 ID=MsG0180005741.01.T01:cds;Parent=MsG0180005741.01.T01
Chr1 three_prime_UTR 95544971 95545308 95544971 ID=MsG0180005741.01.T01:three_prime_utr;Parent=MsG0180005741.01.T01
Gene Sequence

>MsG0180005741.01.T01

ATGAGAGAGTGCATTTCAGTTCACATCGGTCAAGCCGGTATTCAGGTCGGAAATGCTTGCTGGGAGCTTTACTGTCTCGAACACGGCATCGGCCCTGATGGCCAAATGCCGAGCGACAAGACTGTTGGAGGTGGTGATGACGCTTTCAACACCTTCTTCAGCGAGACTGGTGCTGGAAAGCATGTCCCCCGTGCTGTTTTTGTAGATCTTGAGCCCACTGTTATCGATGAGGTGAGGACTGGAACCTATCGCCAACTCTTCCATCCTGAGCAGCTCATCAGTGGCAAAGAAGATGCCGCCAACAACTTCGCCCGTGGTCATTATACCATTGGGAAAGAGATCGTTGATCTGTGTTTGGACCGCATCAGAAAGCTTGCTGATAACTGCACTGGTCTCCAAGGGTTTTTGGTTTTCAATGCTGTTGGAGGAGGAACTGGTTCTGGTCTTGGTTCTCTGCTCCTTGAGCGTCTGTCTGTTGATTATGGAAAGAAATCCAAGCTTGGGTTTACTGTCTATCCCTCCCCTCAGGTTTCCACCTCTGTTGTTGAGCCATACAACAGTGTCCTCTCCACCCACTCCCTCTTGGAGCACACTGATGTTGCTGTTCTTCTGGACAATGAAGCTATCTATGACATCTGCAGGCGCTCCCTCGACATTGAGCGTCCCACTTACACCAACCTTAACCGTCTTGTTTCTCAGGTGATTTCATCCTTGACTGCTTCTTTGAGGTTTGATGGTGCTCTCAATGTTGATGTGACTGAATTCCAGACCAACTTGGTCCCATATCCCAGAATCCATTTCATGCTTTCTTCATATGCTCCAGTTATATCTGCTGAGAAAGCTTATCACGAGCAGCTTTCAGTTGCTGAAATTACCAACAGTGCTTTTGAGCCATCATCTATGATGGCTAAGTGTGACCCTCGCCATGGAAAGTACATGGCTTGCTGTTTGATGTACCGAGGCGATGTTGTTCCCAAGGATGTGAATGCTGCTGTCGCTACAATCAAAACCAAGAGGACCATTCAGTTTGTGGATTGGTGCCCTACTGGTTTCAAGTGTGGTATTAACTATCAGCCACCTACTGTTGTTCCTGGTGGTGACCTTGCTAAGGTACAGAGGGCAGTTTGCATGATTTCAAACTCAACAAGTGTGGCTGAGGTGTTTGGTCGCATTGATCACAAGTTTGATCTGATGTATGCCAAGCGTGCATTTGTTCACTGGTATGTGGGTGAGGGTATGGAAGAAGGAGAATTTTCTGAAGCCCGGGAGGATCTTGCTGCTTTGGAAAAGGATTATGAAGAAGTTGGTGCCGAGTCTGGTGAGGGCGGTGATGAAGATATGGATGACTACTAG

Protein sequence

>MsG0180005741.01.T01

MRECISVHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESGEGGDEDMDDY*