AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047330.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047330.01.T01 MTR_4g124960 83.962 212 23 3 1 211 1 202 9.56e-112 323
MsG0880047330.01.T01 MTR_4g124960 68.376 117 35 2 221 336 81 196 6.99e-42 145
MsG0880047330.01.T01 MTR_4g124960 81.522 184 24 2 1 184 1 174 2.37e-90 268
MsG0880047330.01.T01 MTR_4g124960 67.368 95 30 1 221 315 81 174 1.47e-33 122
MsG0880047330.01.T01 MTR_4g124950 68.750 128 38 2 70 197 1 126 3.87e-47 155
MsG0880047330.01.T01 MTR_4g124950 69.725 109 21 2 228 328 22 126 7.99e-39 134
MsG0880047330.01.T01 MTR_2g042900 44.061 261 85 11 1 211 1 250 9.22e-47 159
MsG0880047330.01.T01 MTR_2g042900 37.013 154 43 5 230 337 101 246 3.86e-18 83.2
MsG0880047330.01.T01 MTR_2g042900 54.225 142 51 6 1 131 1 139 5.16e-32 120
MsG0880047330.01.T01 MTR_5g013515 35.606 132 68 1 94 208 4 135 4.03e-20 85.5
MsG0880047330.01.T01 MTR_5g013515 37.719 114 48 3 231 321 4 117 2.17e-16 75.5
MsG0880047330.01.T01 MTR_5g013520 37.500 128 69 3 98 214 9 136 4.33e-20 85.5
MsG0880047330.01.T01 MTR_5g013520 38.983 118 55 3 236 336 10 127 8.60e-15 71.2
MsG0880047330.01.T01 MTR_5g013530 36.478 159 78 5 76 211 5 163 5.10e-20 86.3
MsG0880047330.01.T01 MTR_5g013530 41.176 119 52 4 236 336 39 157 7.83e-16 74.7
MsG0880047330.01.T01 MTR_5g013530 40.476 126 63 4 98 211 16 141 7.08e-20 85.1
MsG0880047330.01.T01 MTR_5g013530 39.259 135 62 5 222 336 1 135 5.82e-17 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047330.01.T01 AT1G19180 35.361 263 106 9 1 210 1 252 2.97e-33 124
MsG0880047330.01.T01 AT1G19180 35.714 126 57 1 228 329 113 238 6.31e-14 71.2
MsG0880047330.01.T01 AT1G19180 35.361 263 106 9 1 210 1 252 2.97e-33 124
MsG0880047330.01.T01 AT1G19180 35.714 126 57 1 228 329 113 238 6.31e-14 71.2
MsG0880047330.01.T01 AT1G74950 32.016 253 111 7 7 205 1 246 8.55e-25 101
MsG0880047330.01.T01 AT1G74950 34.815 135 55 3 229 330 107 241 1.85e-12 66.6
MsG0880047330.01.T01 AT1G74950 32.159 227 94 6 7 179 1 221 2.88e-21 90.9
MsG0880047330.01.T01 AT1G19180 37.143 140 52 4 99 210 55 186 5.94e-17 78.2
MsG0880047330.01.T01 AT1G19180 34.351 131 62 1 223 329 42 172 5.15e-14 70.1

Find 58 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGACTTCATCGGACATTTC+TGG 0.184990 8:-84755678 MsG0880047330.01.T01:CDS
ATTGTCAATTGTGCAGTTTC+TGG 0.207124 8:+84755060 None:intergenic
CCTTCTTCTCCTTGAGGTAT+TGG 0.218986 8:+84755586 None:intergenic
AGCTTCACTTCTTCGATTCA+TGG 0.237608 8:-84749337 MsG0880047330.01.T01:CDS
AGCTTCACTTCGTCGATTCA+TGG 0.304214 8:-84754742 MsG0880047330.01.T01:CDS
AATGTCAACTGTGCAGTTTC+CGG 0.323565 8:+84749631 None:intergenic
TTTAGCACCTAAAACAAGTA+TGG 0.324800 8:+84748467 None:intergenic
TCGGAATCGCTTCTTTGATA+TGG 0.333476 8:+84748521 None:intergenic
TCAGGAAAGGTTCTTTGATA+TGG 0.341074 8:+84754325 None:intergenic
TTTATTTACCATTTGTTTCA+GGG 0.363709 8:+84755526 None:intergenic
CAACCACCTCCTACACTAAC+TGG 0.374106 8:-84749493 MsG0880047330.01.T01:intron
TTATTTCTTTAAAGAAGATA+TGG 0.376656 8:-84749373 MsG0880047330.01.T01:intron
CGACTTTATCAGTTTGTTGC+CGG 0.376712 8:+84755650 None:intergenic
TAATGGAGAAGTTATTGTAT+TGG 0.400656 8:-84749602 MsG0880047330.01.T01:CDS
GCTTCTTTGATATGGTGATT+TGG 0.408539 8:+84748529 None:intergenic
AGCTCCTCAACTTTCTCAGC+AGG 0.410410 8:+84755000 None:intergenic
TCCGCTCCATGGCTTGTGTT+AGG 0.414480 8:-84754277 MsG0880047330.01.T01:CDS
TAACTCAATGGTTAACAAAC+CGG 0.425259 8:-84749650 MsG0880047330.01.T01:CDS
TTACAGAGTTATTAATCCTA+TGG 0.427315 8:-84755091 MsG0880047330.01.T01:intron
GGTGGTTGAAGACTCATATC+AGG 0.439597 8:+84749508 None:intergenic
TCATGGAGAAGAGGAAAGAT+AGG 0.451183 8:-84754725 MsG0880047330.01.T01:intron
AGCTCCTCAACTTTGTCAGC+AGG 0.455494 8:+84749571 None:intergenic
GTTTCTGGCTCTTTAACCAT+AGG 0.475200 8:+84755075 None:intergenic
TTACAGAACTAATAACTCAA+TGG 0.476118 8:-84749662 MsG0880047330.01.T01:CDS
TTCTTCGATTCATGGAGAAA+AGG 0.478429 8:-84749329 MsG0880047330.01.T01:CDS
CCAATACCTCAAGGAGAAGA+AGG 0.480824 8:-84755586 MsG0880047330.01.T01:CDS
CAATCTACAGGGTCATCACC+TGG 0.484929 8:-84755310 MsG0880047330.01.T01:intron
TTATTTACCATTTGTTTCAG+GGG 0.508177 8:+84755527 None:intergenic
GATACCAATGTCGACTTCAT+CGG 0.515126 8:-84755688 None:intergenic
GCATGCACCCCTGAAACAAA+TGG 0.517892 8:-84755534 MsG0880047330.01.T01:intron
CAATTACCAGTTAGTGTAGG+AGG 0.522487 8:+84749487 None:intergenic
TAATGGACAAGTTATTGTGT+TGG 0.534161 8:-84755031 MsG0880047330.01.T01:CDS
GAGAAGAAGGGTAGTTTCGA+AGG 0.535740 8:-84755573 MsG0880047330.01.T01:CDS
TCATGGAGAAAAGGAAAGCC+AGG 0.536399 8:-84749320 MsG0880047330.01.T01:intron
CAGGGGTGCATGCGTTGTGA+AGG 0.536647 8:+84755544 None:intergenic
CCTGGTTCATCTTCTCACTC+TGG 0.547944 8:-84755292 MsG0880047330.01.T01:CDS
CCAGAGTGAGAAGATGAACC+AGG 0.548191 8:+84755292 None:intergenic
CATTTGCAAGCACTCAAACT+CGG 0.560353 8:-84749543 MsG0880047330.01.T01:CDS
AGCATGCTGACTCCGCTCCA+TGG 0.562298 8:-84754288 MsG0880047330.01.T01:CDS
TGCATGCGTTGTGAAGGTTA+AGG 0.575616 8:+84755550 None:intergenic
AAGTATGGAGTGGATTCAGT+AGG 0.584677 8:+84748482 None:intergenic
GGTTCTTTGATATGGTGAGT+AGG 0.584950 8:+84754333 None:intergenic
TTCTGGAGCAGAGTCAGGAA+AGG 0.587295 8:+84754312 None:intergenic
GTTTGTGGGAAATAAATCCA+TGG 0.589977 8:+84755264 None:intergenic
CACCTAAAACAAGTATGGAG+TGG 0.594681 8:+84748472 None:intergenic
TTAGCACCTAACACAAGCCA+TGG 0.596993 8:+84754271 None:intergenic
CTCATATCAGGAATAACTGA+AGG 0.598557 8:+84749520 None:intergenic
AACTACCCTTCTTCTCCTTG+AGG 0.603992 8:+84755580 None:intergenic
TTCTCACTCTGGAATAACCA+TGG 0.605298 8:-84755281 MsG0880047330.01.T01:CDS
TTACCAGTTAGTGTAGGAGG+TGG 0.608915 8:+84749490 None:intergenic
GAGCAATTACCAGTTAGTGT+AGG 0.610011 8:+84749484 None:intergenic
CAATACCTCAAGGAGAAGAA+GGG 0.616382 8:-84755585 MsG0880047330.01.T01:CDS
TTCGTCGATTCATGGAGAAG+AGG 0.618289 8:-84754734 MsG0880047330.01.T01:CDS
ACCTAACACAAGCCATGGAG+CGG 0.623220 8:+84754276 None:intergenic
TCTATTGAGCCAATACCTCA+AGG 0.624878 8:-84755595 MsG0880047330.01.T01:CDS
ATGTCCGATGAAGTCGACAT+TGG 0.636880 8:+84755684 None:intergenic
TTACAAGTTTGAGAAAACGT+AGG 0.650898 8:+84755618 None:intergenic
CAACAAACTGATAAAGTCGT+CGG 0.655555 8:-84755646 MsG0880047330.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATAAAAAAAAAAAA+GGG + Chr8:84751683-84751702 None:intergenic 0.0%
!!! AAAATATATATATTTTTTAA+TGG + Chr8:84754049-84754068 None:intergenic 0.0%
!!! AAATATATATATTTTTTAAT+GGG + Chr8:84754048-84754067 None:intergenic 0.0%
!!! TATATTATAATTAATTTTAA+TGG - Chr8:84752991-84753010 MsG0880047330.01.T01:intron 0.0%
!! GTTATTTAATAAAATCTAAA+AGG - Chr8:84752204-84752223 MsG0880047330.01.T01:intron 10.0%
!! TATTAGCTATTAATTAAAAA+GGG - Chr8:84753898-84753917 MsG0880047330.01.T01:intron 10.0%
!! TTATTAGCTATTAATTAAAA+AGG - Chr8:84753897-84753916 MsG0880047330.01.T01:intron 10.0%
!!! AAAATTTTAGATATTTATAG+GGG + Chr8:84753936-84753955 None:intergenic 10.0%
!!! ACAAAATTTTAGATATTTAT+AGG + Chr8:84753938-84753957 None:intergenic 10.0%
!!! CAAAATTTTAGATATTTATA+GGG + Chr8:84753937-84753956 None:intergenic 10.0%
!!! TAATATTTTGAAACAAATAA+AGG - Chr8:84754707-84754726 MsG0880047330.01.T01:intron 10.0%
!!! TTTATTTTTAATTTAACTGA+TGG - Chr8:84749352-84749371 MsG0880047330.01.T01:CDS 10.0%
!! AAGAAATAAAATTTATGATC+AGG + Chr8:84754772-84754791 None:intergenic 15.0%
!! AGTCAAAAAAAAATTTAGAT+GGG + Chr8:84753017-84753036 None:intergenic 15.0%
!! TAACAACTACTATAAATTAT+CGG + Chr8:84752874-84752893 None:intergenic 15.0%
!! TATTTACAAAGTTATTGAAA+TGG - Chr8:84752131-84752150 MsG0880047330.01.T01:intron 15.0%
!!! AAATTTTACAATTTGTTTCA+AGG + Chr8:84753831-84753850 None:intergenic 15.0%
!!! AAGGAAATATTTTTTGTATT+AGG - Chr8:84754726-84754745 MsG0880047330.01.T01:CDS 15.0%
!!! AATATTTAATTTTAACCCTT+AGG - Chr8:84754069-84754088 MsG0880047330.01.T01:intron 15.0%
!!! AATTATTTAAATTTTTTGGG+TGG + Chr8:84752608-84752627 None:intergenic 15.0%
!!! AATTTTACAATTTGTTTCAA+GGG + Chr8:84753830-84753849 None:intergenic 15.0%
!!! AGGAAATATTTTTTGTATTA+GGG - Chr8:84754727-84754746 MsG0880047330.01.T01:CDS 15.0%
!!! ATAAGAAAATTTGTTTTGAT+TGG + Chr8:84750541-84750560 None:intergenic 15.0%
!!! ATGTCTATTAAATCTTTTTT+CGG - Chr8:84749531-84749550 MsG0880047330.01.T01:CDS 15.0%
!!! ATTATGAATATTTTGATTAC+CGG + Chr8:84755132-84755151 None:intergenic 15.0%
!!! ATTATTTAAATTTTTTGGGT+GGG + Chr8:84752607-84752626 None:intergenic 15.0%
!!! CAATCAACTAATATTTTTTT+GGG - Chr8:84755015-84755034 MsG0880047330.01.T01:CDS 15.0%
!!! CTTTTCATTTTTTTTTAACT+TGG + Chr8:84751450-84751469 None:intergenic 15.0%
!!! GTTTTTAAAAGAGAAAAATA+GGG + Chr8:84750453-84750472 None:intergenic 15.0%
!!! TAAATTCAAGTTTTTATTCA+AGG - Chr8:84749476-84749495 MsG0880047330.01.T01:intron 15.0%
!!! TAAGAAAATTTGTTTTGATT+GGG + Chr8:84750540-84750559 None:intergenic 15.0%
!!! TCAATCAACTAATATTTTTT+TGG - Chr8:84755014-84755033 MsG0880047330.01.T01:CDS 15.0%
!!! TCTAAAATACATTAAAAACA+AGG - Chr8:84753162-84753181 MsG0880047330.01.T01:intron 15.0%
!!! TGTTTTTAAAAGAGAAAAAT+AGG + Chr8:84750454-84750473 None:intergenic 15.0%
!!! TTATTTCTTTAAAGAAGATA+TGG - Chr8:84754783-84754802 MsG0880047330.01.T01:CDS 15.0%
!! AAAAGATAATAGACTGTATT+TGG + Chr8:84750809-84750828 None:intergenic 20.0%
!! AAAATTACCTACTTGAAAAA+TGG + Chr8:84751821-84751840 None:intergenic 20.0%
!! AAATGTATTATTTACTGTGT+TGG + Chr8:84751508-84751527 None:intergenic 20.0%
!! ACTTCTCTTATAATATAACA+TGG - Chr8:84751710-84751729 MsG0880047330.01.T01:intron 20.0%
!! AGTTAATTGCTCAAAATAAA+TGG + Chr8:84751753-84751772 None:intergenic 20.0%
!! ATTGAAATGGATAAAATGAA+GGG - Chr8:84752144-84752163 MsG0880047330.01.T01:intron 20.0%
!! GAATGACAAAAATTAATTAC+AGG + Chr8:84750095-84750114 None:intergenic 20.0%
!! GAGTCAAAAAAAAATTTAGA+TGG + Chr8:84753018-84753037 None:intergenic 20.0%
!! GTTATTTAAGAAGATCTTAA+GGG + Chr8:84751622-84751641 None:intergenic 20.0%
!! TAAAAAGTGAGAGATAAAAT+TGG + Chr8:84753542-84753561 None:intergenic 20.0%
!! TAACAAAAATTCACTAATCA+CGG - Chr8:84751390-84751409 MsG0880047330.01.T01:intron 20.0%
!! TAACAGTAACACTATATATT+AGG + Chr8:84755577-84755596 None:intergenic 20.0%
!! TATTGAAATGGATAAAATGA+AGG - Chr8:84752143-84752162 MsG0880047330.01.T01:intron 20.0%
!! TCAAATTATACAAAACTCAT+TGG - Chr8:84753121-84753140 MsG0880047330.01.T01:intron 20.0%
!! TTTATTTACCATTTGTTTCA+GGG + Chr8:84748633-84748652 None:intergenic 20.0%
!!! AATTTTTGTTAGGTTAGATT+TGG + Chr8:84751381-84751400 None:intergenic 20.0%
!!! AGAAATGAGAAATTTTTTTG+TGG + Chr8:84751953-84751972 None:intergenic 20.0%
!!! ATGTATCTTTTTTTTTGTTG+TGG - Chr8:84751039-84751058 MsG0880047330.01.T01:intron 20.0%
!!! ATTTTTGTTAGGTTAGATTT+GGG + Chr8:84751380-84751399 None:intergenic 20.0%
!!! CAAAATGATAAATTAAGTTG+AGG + Chr8:84750925-84750944 None:intergenic 20.0%
!!! CAATTGACAATGTTTTATAA+TGG - Chr8:84749108-84749127 MsG0880047330.01.T01:intron 20.0%
!!! TAATATCTAATTTTAGCTGT+TGG - Chr8:84753741-84753760 MsG0880047330.01.T01:intron 20.0%
!!! TACAATTTAATCCATCATTT+TGG + Chr8:84752111-84752130 None:intergenic 20.0%
!!! TGTTATTTAAGAAGATCTTA+AGG + Chr8:84751623-84751642 None:intergenic 20.0%
!!! TTAATTGAGAAAATTTTCAC+AGG + Chr8:84752796-84752815 None:intergenic 20.0%
!!! TTCAACATTTACTTTTTAAG+CGG + Chr8:84753055-84753074 None:intergenic 20.0%
!!! TTTTATTTACCATTTGTTTC+AGG + Chr8:84748634-84748653 None:intergenic 20.0%
!!! TTTTCTTTTTTCAATCTACA+GGG - Chr8:84748835-84748854 MsG0880047330.01.T01:intron 20.0%
!!! TTTTGTATAATTTGAGTAAG+TGG + Chr8:84753116-84753135 None:intergenic 20.0%
!!! TTTTTCTTTTTTCAATCTAC+AGG - Chr8:84748834-84748853 MsG0880047330.01.T01:intron 20.0%
! AAATCAAACAACCAAGAAAA+GGG + Chr8:84754113-84754132 None:intergenic 25.0%
! AAATCAATTACCAATTAGTG+AGG + Chr8:84749246-84749265 None:intergenic 25.0%
! AACAAAAATTCACTAATCAC+GGG - Chr8:84751391-84751410 MsG0880047330.01.T01:intron 25.0%
! AATCAATTACCAATTAGTGA+GGG + Chr8:84749245-84749264 None:intergenic 25.0%
! AATCCAAAATCCAAATTAGT+TGG + Chr8:84749563-84749582 None:intergenic 25.0%
! ACATTAAAAACAAGGTGTAA+TGG - Chr8:84753170-84753189 MsG0880047330.01.T01:intron 25.0%
! AGAAAAAATCCATAGTTGTA+AGG + Chr8:84748932-84748951 None:intergenic 25.0%
! AGTAAATGTTGAAAAACCTA+AGG - Chr8:84753062-84753081 MsG0880047330.01.T01:intron 25.0%
! ATACAAACAAACCAAAATGA+TGG - Chr8:84752097-84752116 MsG0880047330.01.T01:intron 25.0%
! ATATGGCAAAAATTGAAACA+CGG + Chr8:84754201-84754220 None:intergenic 25.0%
! ATGTGTTTGGAAAATTAGAA+GGG - Chr8:84752173-84752192 MsG0880047330.01.T01:intron 25.0%
! ATGTTCTCTTTCAACTAAAT+AGG + Chr8:84750968-84750987 None:intergenic 25.0%
! CTTGATAAGTAAATAACAAG+AGG + Chr8:84749727-84749746 None:intergenic 25.0%
! GATAGTGCATAATATATCAA+AGG + Chr8:84751084-84751103 None:intergenic 25.0%
! GTAACACTATATATTAGGTT+AGG + Chr8:84755572-84755591 None:intergenic 25.0%
! TAAATGAACTTGGTCAAAAA+TGG - Chr8:84748734-84748753 MsG0880047330.01.T01:intron 25.0%
! TAATGGAGAAGTTATTGTAT+TGG - Chr8:84754554-84754573 MsG0880047330.01.T01:intron 25.0%
! TACCGAATAGAGAAAAATAA+GGG + Chr8:84748793-84748812 None:intergenic 25.0%
! TAGTCTTTGTTAAATGAACT+TGG - Chr8:84748724-84748743 MsG0880047330.01.T01:intron 25.0%
! TTACAGAACTAATAACTCAA+TGG - Chr8:84754494-84754513 MsG0880047330.01.T01:intron 25.0%
! TTACAGAGTTATTAATCCTA+TGG - Chr8:84749065-84749084 MsG0880047330.01.T01:intron 25.0%
! TTATTTACCATTTGTTTCAG+GGG + Chr8:84748632-84748651 None:intergenic 25.0%
! TTGTTTCAACATTTCAATCA+AGG + Chr8:84754992-84755011 None:intergenic 25.0%
!! AAGGTGTAAGATTGTATTTT+TGG + Chr8:84750371-84750390 None:intergenic 25.0%
!! AATTCAGTTCCTATAGTTTT+GGG - Chr8:84748670-84748689 MsG0880047330.01.T01:intron 25.0%
!! CAAATACAGGAAATTGTTTT+TGG - Chr8:84749304-84749323 MsG0880047330.01.T01:intron 25.0%
!! CTCTATTTTGTGTTTGTTTA+TGG + Chr8:84751194-84751213 None:intergenic 25.0%
!! GATTTTACACAATTTTGTGT+CGG - Chr8:84752536-84752555 MsG0880047330.01.T01:intron 25.0%
!! GTGAAATATTCATGTGTTTT+GGG + Chr8:84753317-84753336 None:intergenic 25.0%
!! GTGATTAGTGAATTTTTGTT+AGG + Chr8:84751391-84751410 None:intergenic 25.0%
!! TTGATGATATAGACTGTATT+TGG + Chr8:84750602-84750621 None:intergenic 25.0%
!! TTGTGATTTGAAACAAATAC+AGG - Chr8:84749291-84749310 MsG0880047330.01.T01:intron 25.0%
!!! ATGAGAAATTTTTTTGTGGA+TGG + Chr8:84751949-84751968 None:intergenic 25.0%
!!! ATTTAATTTGTTTGAGAGAG+AGG + Chr8:84749461-84749480 None:intergenic 25.0%
!!! CAGTTGACATTGTTTTATAA+TGG - Chr8:84754537-84754556 MsG0880047330.01.T01:intron 25.0%
!!! CTATTAAATCTTTTTTCGGT+TGG - Chr8:84749535-84749554 MsG0880047330.01.T01:CDS 25.0%
!!! GTAAAATGTGATTTTTGAGA+TGG + Chr8:84755365-84755384 None:intergenic 25.0%
!!! TCAACATTTACTTTTTAAGC+GGG + Chr8:84753054-84753073 None:intergenic 25.0%
!!! TTCCCTTATTTTTCTCTATT+CGG - Chr8:84748788-84748807 MsG0880047330.01.T01:intron 25.0%
!!! TTGAACATTTTTTGAGCTTT+TGG - Chr8:84749581-84749600 MsG0880047330.01.T01:CDS 25.0%
!!! TTGAATTTAATTTGTCTGAG+AGG + Chr8:84754866-84754885 None:intergenic 25.0%
!!! TTTCTTTCCATTTTTCAAGT+AGG - Chr8:84751811-84751830 MsG0880047330.01.T01:intron 25.0%
AACTATTCCTAAATAAACGC+AGG + Chr8:84754142-84754161 None:intergenic 30.0%
AAGCCAACGTTAATGATAAA+AGG + Chr8:84752247-84752266 None:intergenic 30.0%
AATTGCAATGACTCAAACAA+TGG + Chr8:84749013-84749032 None:intergenic 30.0%
AGAAATAGATAAAGAGTCTG+AGG - Chr8:84751286-84751305 MsG0880047330.01.T01:intron 30.0%
AGAGATCAAATTCGTACTTA+TGG + Chr8:84750253-84750272 None:intergenic 30.0%
AGCCAACGTTAATGATAAAA+GGG + Chr8:84752246-84752265 None:intergenic 30.0%
ATTTAAGAAGATCTTAAGGG+AGG + Chr8:84751619-84751638 None:intergenic 30.0%
CATGTGTTTGGAAAATTAGA+AGG - Chr8:84752172-84752191 MsG0880047330.01.T01:intron 30.0%
CGATGTTAGATTCTATTTAG+TGG - Chr8:84752003-84752022 MsG0880047330.01.T01:intron 30.0%
GAAATAGATAAAGAGTCTGA+GGG - Chr8:84751287-84751306 MsG0880047330.01.T01:intron 30.0%
GAAATCAAACAACCAAGAAA+AGG + Chr8:84754114-84754133 None:intergenic 30.0%
GACAACAAAATTATGACTTG+GGG - Chr8:84753208-84753227 MsG0880047330.01.T01:intron 30.0%
GATGTGTCATAAGATTAAGA+AGG + Chr8:84750390-84750409 None:intergenic 30.0%
GCAACTATAAGAGATGAATA+TGG + Chr8:84754218-84754237 None:intergenic 30.0%
GCATACGTTAAGATTACTAA+AGG + Chr8:84750308-84750327 None:intergenic 30.0%
GGACAACAAAATTATGACTT+GGG - Chr8:84753207-84753226 MsG0880047330.01.T01:intron 30.0%
GTACCGAATAGAGAAAAATA+AGG + Chr8:84748794-84748813 None:intergenic 30.0%
GTTGTCGTAACTTTGTAATT+TGG - Chr8:84755259-84755278 MsG0880047330.01.T01:CDS 30.0%
GTTTGACTAAAAAGTTAGGA+TGG + Chr8:84752918-84752937 None:intergenic 30.0%
TAACTCAATGGTTAACAAAC+CGG - Chr8:84754506-84754525 MsG0880047330.01.T01:intron 30.0%
TAGATCTATCATACAGTCTT+AGG + Chr8:84750027-84750046 None:intergenic 30.0%
TCTTATAGTTGCGATTGTTT+AGG - Chr8:84754226-84754245 MsG0880047330.01.T01:intron 30.0%
TGAAACTCATGCAAATTCAA+AGG + Chr8:84752756-84752775 None:intergenic 30.0%
TGCATAATATATCAAAGGTC+CGG + Chr8:84751079-84751098 None:intergenic 30.0%
TGGACAACAAAATTATGACT+TGG - Chr8:84753206-84753225 MsG0880047330.01.T01:intron 30.0%
TGTATTATTTACTGTGTTGG+CGG + Chr8:84751505-84751524 None:intergenic 30.0%
TGTGTTTGGAAAATTAGAAG+GGG - Chr8:84752174-84752193 MsG0880047330.01.T01:intron 30.0%
TTACAAGTTTGAGAAAACGT+AGG + Chr8:84748541-84748560 None:intergenic 30.0%
TTTGTGTCGGATTTAGATTT+CGG - Chr8:84752549-84752568 MsG0880047330.01.T01:intron 30.0%
! ATCCCTTTTATCATTAACGT+TGG - Chr8:84752241-84752260 MsG0880047330.01.T01:intron 30.0%
! CAATTCAGTTCCTATAGTTT+TGG - Chr8:84748669-84748688 MsG0880047330.01.T01:intron 30.0%
! CCTCTGAGAAAAACAATTAA+TGG - Chr8:84751474-84751493 MsG0880047330.01.T01:intron 30.0%
! GGTGAAATATTCATGTGTTT+TGG + Chr8:84753318-84753337 None:intergenic 30.0%
! GTACCAACTAATTTGGATTT+TGG - Chr8:84749557-84749576 MsG0880047330.01.T01:CDS 30.0%
! TAATGGACAAGTTATTGTGT+TGG - Chr8:84749125-84749144 MsG0880047330.01.T01:intron 30.0%
! TCCATAGTTGTAAGGTTTTT+CGG + Chr8:84748924-84748943 None:intergenic 30.0%
! TGTGTGTTTTATGCTTTGTA+AGG - Chr8:84753986-84754005 MsG0880047330.01.T01:intron 30.0%
! TTTTCTCTATTCGGTACAAT+TGG - Chr8:84748797-84748816 MsG0880047330.01.T01:intron 30.0%
!! AAAATTTTATTTCCACCGTG+TGG - Chr8:84753844-84753863 MsG0880047330.01.T01:intron 30.0%
!! AGTAGTTGATGATATGCATA+AGG + Chr8:84755332-84755351 None:intergenic 30.0%
!! AGTTAGTGTGTTTTATTGAG+TGG + Chr8:84750490-84750509 None:intergenic 30.0%
!! ATTCTAAAGCCCAAAACTAT+AGG + Chr8:84748682-84748701 None:intergenic 30.0%
!! CCATTAATTGTTTTTCTCAG+AGG + Chr8:84751477-84751496 None:intergenic 30.0%
!! GTGACAAAGTTGTGTTTTTA+CGG + Chr8:84750885-84750904 None:intergenic 30.0%
!! TAACTTAGTTCTATTAGCTG+AGG - Chr8:84750045-84750064 MsG0880047330.01.T01:intron 30.0%
!! TCAATTTCTAGTAACACAAG+TGG + Chr8:84755434-84755453 None:intergenic 30.0%
!!! AGGAAATTGTTTTTGGTATC+AGG - Chr8:84749311-84749330 MsG0880047330.01.T01:intron 30.0%
!!! CAACATTTACTTTTTAAGCG+GGG + Chr8:84753053-84753072 None:intergenic 30.0%
!!! CTATGGATTTTTTCTTTCCA+AGG - Chr8:84748937-84748956 MsG0880047330.01.T01:intron 30.0%
!!! GGAAATTGTTTTTGGTATCA+GGG - Chr8:84749312-84749331 MsG0880047330.01.T01:intron 30.0%
AAATGGATGACACTCTTCAA+AGG - Chr8:84753797-84753816 MsG0880047330.01.T01:intron 35.0%
AAATTAAACCACCTTGATCC+AGG + Chr8:84751859-84751878 None:intergenic 35.0%
AACTTATTGTTCCTGGATCA+AGG - Chr8:84751845-84751864 MsG0880047330.01.T01:intron 35.0%
AAGTTCTACCATGTGATTTG+GGG + Chr8:84753653-84753672 None:intergenic 35.0%
ACAATTGTTGAGATGTGAGT+TGG + Chr8:84753585-84753604 None:intergenic 35.0%
ACCGAAAAACCTTACAACTA+TGG - Chr8:84748920-84748939 MsG0880047330.01.T01:intron 35.0%
ACTCACATCTCAACAATTGT+TGG - Chr8:84753585-84753604 MsG0880047330.01.T01:intron 35.0%
ACTGCAAAGTAAGTAACAAG+AGG + Chr8:84755526-84755545 None:intergenic 35.0%
AGAAATGCACACAATACCTT+AGG + Chr8:84753081-84753100 None:intergenic 35.0%
AGTTTGTAGTTGACAAACCA+TGG - Chr8:84754288-84754307 MsG0880047330.01.T01:CDS 35.0%
ATAGACAGAGAAATGGAGAA+GGG + Chr8:84754969-84754988 None:intergenic 35.0%
ATCAAGGATAGACAGAGAAA+TGG + Chr8:84754976-84754995 None:intergenic 35.0%
ATGCATGCATAGCATAAATC+TGG - Chr8:84749606-84749625 MsG0880047330.01.T01:CDS 35.0%
ATTGTCAATTGTGCAGTTTC+TGG + Chr8:84749099-84749118 None:intergenic 35.0%
ATTGTGGTTGATCAACGTAA+AGG + Chr8:84751924-84751943 None:intergenic 35.0%
ATTTCCAGTCACACAAAGAA+AGG + Chr8:84749632-84749651 None:intergenic 35.0%
ATTTCCTGAGTGATGTTGTT+TGG - Chr8:84755546-84755565 MsG0880047330.01.T01:CDS 35.0%
CAACAAACTGATAAAGTCGT+CGG - Chr8:84748510-84748529 MsG0880047330.01.T01:CDS 35.0%
CAATTGTTGAGATGTGAGTT+GGG + Chr8:84753584-84753603 None:intergenic 35.0%
CATAATATATCAAAGGTCCG+GGG + Chr8:84751077-84751096 None:intergenic 35.0%
CGCATGAAAGTAATAAATGG+AGG + Chr8:84750144-84750163 None:intergenic 35.0%
CGGAGTTTGACTAAAAAGTT+AGG + Chr8:84752922-84752941 None:intergenic 35.0%
CTCATATCAGGAATAACTGA+AGG + Chr8:84754639-84754658 None:intergenic 35.0%
GAAGTTCTACCATGTGATTT+GGG + Chr8:84753654-84753673 None:intergenic 35.0%
GAGCGCATGAAAGTAATAAA+TGG + Chr8:84750147-84750166 None:intergenic 35.0%
GCATAATATATCAAAGGTCC+GGG + Chr8:84751078-84751097 None:intergenic 35.0%
GCTTATACTTGACATGTTAG+CGG - Chr8:84752720-84752739 MsG0880047330.01.T01:intron 35.0%
GCTTCTTTGATATGGTGATT+TGG + Chr8:84755630-84755649 None:intergenic 35.0%
GTTTGTGGGAAATAAATCCA+TGG + Chr8:84748895-84748914 None:intergenic 35.0%
TAAGTACGAAGTTGAAGTGA+CGG + Chr8:84752942-84752961 None:intergenic 35.0%
TAGAATTGGATGGAATCAGT+TGG + Chr8:84755391-84755410 None:intergenic 35.0%
TCAGGAAAGGTTCTTTGATA+TGG + Chr8:84749834-84749853 None:intergenic 35.0%
TGAAGTTCTACCATGTGATT+TGG + Chr8:84753655-84753674 None:intergenic 35.0%
TGATCCAGGAACAATAAGTT+GGG + Chr8:84751845-84751864 None:intergenic 35.0%
TGTACTTCCATGCACTTAAA+TGG - Chr8:84753780-84753799 MsG0880047330.01.T01:intron 35.0%
TGTCCAATCCAAGATGTATT+TGG + Chr8:84753275-84753294 None:intergenic 35.0%
TTCTTCGATTCATGGAGAAA+AGG - Chr8:84754827-84754846 MsG0880047330.01.T01:intron 35.0%
TTGATCCAGGAACAATAAGT+TGG + Chr8:84751846-84751865 None:intergenic 35.0%
! AAAAGCACAAAAACTCACCT+TGG + Chr8:84748957-84748976 None:intergenic 35.0%
! AACTGATTCCATCCAATTCT+AGG - Chr8:84755390-84755409 MsG0880047330.01.T01:intron 35.0%
! ACATCTTGGATTGGACATAA+TGG - Chr8:84753278-84753297 MsG0880047330.01.T01:intron 35.0%
! AGAAGCACAAAAACATACCT+TGG + Chr8:84754370-84754389 None:intergenic 35.0%
! ATTTTCACAGGACAATATGC+AGG + Chr8:84752784-84752803 None:intergenic 35.0%
! CAAACAGTTATAGTTTTCCG+CGG - Chr8:84752667-84752686 MsG0880047330.01.T01:intron 35.0%
! TTTTCCCAACTTATTGTTCC+TGG - Chr8:84751838-84751857 MsG0880047330.01.T01:intron 35.0%
!! AGTGAAGCTTTTCTAGCAAT+TGG + Chr8:84749403-84749422 None:intergenic 35.0%
!! ATGAAGTGTTTTTCTCGCAA+TGG + Chr8:84752052-84752071 None:intergenic 35.0%
!!! ACTTTTTTGCACACAAGCAA+TGG + Chr8:84754433-84754452 None:intergenic 35.0%
!!! CAACTTTCGTGTTGTTTTCA+CGG + Chr8:84755243-84755262 None:intergenic 35.0%
!!! CTTTTTTGCACACAAGCAAT+GGG + Chr8:84754432-84754451 None:intergenic 35.0%
!!! GTGGATTCAGTAGGTTTTTT+TGG + Chr8:84755668-84755687 None:intergenic 35.0%
!!! TTTTTTGCACACAAGCAATG+GGG + Chr8:84754431-84754450 None:intergenic 35.0%
!!! TTTTTTGGTGTCACGTTTGT+GGG + Chr8:84754322-84754341 None:intergenic 35.0%
!!! TTTTTTGTGGATGGACATTG+TGG + Chr8:84751940-84751959 None:intergenic 35.0%
AACCTAACAAACCCGTATAC+GGG - Chr8:84751417-84751436 MsG0880047330.01.T01:intron 40.0%
AATGTCAACTGTGCAGTTTC+CGG + Chr8:84754528-84754547 None:intergenic 40.0%
ACACGATCAATCATCTCCAA+CGG - Chr8:84753350-84753369 MsG0880047330.01.T01:intron 40.0%
ACCAAAAAACGTTACACCTG+TGG - Chr8:84754333-84754352 MsG0880047330.01.T01:CDS 40.0%
ACTCAGGTACAACACAAAAC+GGG - Chr8:84751321-84751340 MsG0880047330.01.T01:intron 40.0%
ACTTCATTTCCACGATGAAG+AGG - Chr8:84753669-84753688 MsG0880047330.01.T01:intron 40.0%
AGCTTCACTTCTTCGATTCA+TGG - Chr8:84754819-84754838 MsG0880047330.01.T01:CDS 40.0%
AGGCAAACCAATTTGCACAA+TGG + Chr8:84755506-84755525 None:intergenic 40.0%
AGGCAAAGCAATTTGCACAA+TGG + Chr8:84749707-84749726 None:intergenic 40.0%
CAACCTAACAAACCCGTATA+CGG - Chr8:84751416-84751435 MsG0880047330.01.T01:intron 40.0%
CAAGCAAAATCAAGGACTTC+CGG - Chr8:84755110-84755129 MsG0880047330.01.T01:intron 40.0%
CAATACCTCAAGGAGAAGAA+GGG - Chr8:84748571-84748590 MsG0880047330.01.T01:intron 40.0%
CAATTACCAATTAGTGAGGG+AGG + Chr8:84749242-84749261 None:intergenic 40.0%
CAATTACCAGTTAGTGTAGG+AGG + Chr8:84754672-84754691 None:intergenic 40.0%
CACTATTTATGTTCCTCTCG+TGG + Chr8:84755178-84755197 None:intergenic 40.0%
CATTTGCAAGCACTCAAACT+CGG - Chr8:84754613-84754632 MsG0880047330.01.T01:intron 40.0%
CGTGCATAGATGTAACCTAA+GGG + Chr8:84754087-84754106 None:intergenic 40.0%
CGTTGGAAGGCAATTACATA+TGG + Chr8:84753460-84753479 None:intergenic 40.0%
CTCTAGTCCATTGTGCAAAT+TGG - Chr8:84755496-84755515 MsG0880047330.01.T01:intron 40.0%
GAATCATGTCTTTAGACCGT+TGG + Chr8:84753369-84753388 None:intergenic 40.0%
GACTCAGGTACAACACAAAA+CGG - Chr8:84751320-84751339 MsG0880047330.01.T01:intron 40.0%
GAGCAATTACCAGTTAGTGT+AGG + Chr8:84754675-84754694 None:intergenic 40.0%
GATAGACAGAGAAATGGAGA+AGG + Chr8:84754970-84754989 None:intergenic 40.0%
GCAATGGGGCAAAACAAAAA+TGG + Chr8:84754417-84754436 None:intergenic 40.0%
GGTCCAAATACATCTTGGAT+TGG - Chr8:84753269-84753288 MsG0880047330.01.T01:intron 40.0%
GGTTCTTTGATATGGTGAGT+AGG + Chr8:84749826-84749845 None:intergenic 40.0%
GGTTGTTGAGGGATCATATT+AGG + Chr8:84749221-84749240 None:intergenic 40.0%
GTCTTCCTCAGCAAAAGAAA+AGG + Chr8:84750169-84750188 None:intergenic 40.0%
GTGTCATCCATTTAAGTGCA+TGG + Chr8:84753790-84753809 None:intergenic 40.0%
GTTTGTGGGAAATAAGTCCA+TGG + Chr8:84754308-84754327 None:intergenic 40.0%
TAGATTTGGGTCGATCAACT+TGG + Chr8:84751367-84751386 None:intergenic 40.0%
TATACTTGACATGTTAGCGG+AGG - Chr8:84752723-84752742 MsG0880047330.01.T01:intron 40.0%
TATCCCTACCAACTGAGTTA+AGG - Chr8:84751100-84751119 MsG0880047330.01.T01:intron 40.0%
TCAAACCATCAACGAGGTTT+GGG + Chr8:84754177-84754196 None:intergenic 40.0%
TCATGGAGAAGAGGAAAGAT+AGG - Chr8:84749431-84749450 MsG0880047330.01.T01:intron 40.0%
TCGCTAACCTGCGTTTATTT+AGG - Chr8:84754132-84754151 MsG0880047330.01.T01:intron 40.0%
TCGGAATCGCTTCTTTGATA+TGG + Chr8:84755638-84755657 None:intergenic 40.0%
TCGTGCATAGATGTAACCTA+AGG + Chr8:84754088-84754107 None:intergenic 40.0%
TCTAGTAACACAAGTGGCTT+TGG + Chr8:84755428-84755447 None:intergenic 40.0%
TCTATTGAGCCAATACCTCA+AGG - Chr8:84748561-84748580 MsG0880047330.01.T01:intron 40.0%
TGAAGGGAGATTCATGTGTT+TGG - Chr8:84752160-84752179 MsG0880047330.01.T01:intron 40.0%
TGGAAGGCAATTACATATGG+CGG + Chr8:84753457-84753476 None:intergenic 40.0%
TTAAACCCAAACCTCGTTGA+TGG - Chr8:84754169-84754188 MsG0880047330.01.T01:intron 40.0%
TTATTGTTCCTGGATCAAGG+TGG - Chr8:84751848-84751867 MsG0880047330.01.T01:intron 40.0%
TTCAAACCATCAACGAGGTT+TGG + Chr8:84754178-84754197 None:intergenic 40.0%
TTGTGCTCATGCTCTTACAA+GGG + Chr8:84755204-84755223 None:intergenic 40.0%
! AAGTATGGAGTGGATTCAGT+AGG + Chr8:84755677-84755696 None:intergenic 40.0%
! AGTTCTACCATGTGATTTGG+GGG + Chr8:84753652-84753671 None:intergenic 40.0%
! ATAGTGTGTACCTTGAGTTG+TGG + Chr8:84753515-84753534 None:intergenic 40.0%
! CAATCGATGCCTTTTGTTAG+TGG + Chr8:84753414-84753433 None:intergenic 40.0%
! CAATTTGTTTCAAGGGTGCA+TGG + Chr8:84753823-84753842 None:intergenic 40.0%
! TATGCACGATACCCTTTTCT+TGG - Chr8:84754099-84754118 MsG0880047330.01.T01:intron 40.0%
! TCGGTTGGTACCAACTAATT+TGG - Chr8:84749550-84749569 MsG0880047330.01.T01:CDS 40.0%
! TGACCTTAACTCAGTTGGTA+GGG + Chr8:84751106-84751125 None:intergenic 40.0%
! TGTCATTTGTCCACAACTCA+AGG - Chr8:84753502-84753521 MsG0880047330.01.T01:intron 40.0%
! TTTTCCTGCTGACAAAGTTG+AGG - Chr8:84754581-84754600 MsG0880047330.01.T01:intron 40.0%
! TTTTCCTGCTGAGAAAGTTG+AGG - Chr8:84749152-84749171 MsG0880047330.01.T01:intron 40.0%
! TTTTGTGTTGTACCTGAGTC+AGG + Chr8:84751320-84751339 None:intergenic 40.0%
!! ATTGGACATAATGGACCTAG+AGG - Chr8:84753287-84753306 MsG0880047330.01.T01:intron 40.0%
!! ATTTTATTTCCACCGTGTGG+AGG - Chr8:84753847-84753866 MsG0880047330.01.T01:intron 40.0%
!! CGACTTTATCAGTTTGTTGC+CGG + Chr8:84748509-84748528 None:intergenic 40.0%
!! GTAATGGATTATCGTCACTC+TGG - Chr8:84753186-84753205 MsG0880047330.01.T01:intron 40.0%
!! GTTTCTGGCTCTTTAACCAT+AGG + Chr8:84749084-84749103 None:intergenic 40.0%
!! TGATCGTGTGAGTTGATTGT+TGG + Chr8:84753339-84753358 None:intergenic 40.0%
!! TTCTCACTCTGGAATAACCA+TGG - Chr8:84748875-84748894 MsG0880047330.01.T01:intron 40.0%
!!! AGGTTTTTTTGGAGCAGAGT+CGG + Chr8:84755657-84755676 None:intergenic 40.0%
!!! CTTTTTTTTTGTTGTGGCCG+AGG - Chr8:84751045-84751064 MsG0880047330.01.T01:intron 40.0%
!!! GTTTTTTGGTGTCACGTTTG+TGG + Chr8:84754323-84754342 None:intergenic 40.0%
!!! TCCACAGGTGTAACGTTTTT+TGG + Chr8:84754337-84754356 None:intergenic 40.0%
!!! TCGGACATTTCTGGTTTTTC+CGG - Chr8:84748487-84748506 MsG0880047330.01.T01:CDS 40.0%
!!! TTCGTGTTGTTTTCACGGTA+CGG + Chr8:84755238-84755257 None:intergenic 40.0%
!!! TTTTTCGGTGTCACGTTTGT+GGG + Chr8:84748909-84748928 None:intergenic 40.0%
AAATGACAGACGTCGTATGG+CGG + Chr8:84753490-84753509 None:intergenic 45.0%
AACTACCCTTCTTCTCCTTG+AGG + Chr8:84748579-84748598 None:intergenic 45.0%
AGGAAGACACTCAAGCAATC+AGG - Chr8:84750181-84750200 MsG0880047330.01.T01:intron 45.0%
ATTAGTGAGGGAGGTTGTTG+AGG + Chr8:84749233-84749252 None:intergenic 45.0%
CAACAACCTCCCTCACTAAT+TGG - Chr8:84749233-84749252 MsG0880047330.01.T01:intron 45.0%
CACGATGAAGAGGAAGAAGA+GGG - Chr8:84753679-84753698 MsG0880047330.01.T01:intron 45.0%
CATCTTCTTCTTCCTCCACA+CGG + Chr8:84753862-84753881 None:intergenic 45.0%
CATGGGGTCCAAATACATCT+TGG - Chr8:84753264-84753283 MsG0880047330.01.T01:intron 45.0%
CCAATACCTCAAGGAGAAGA+AGG - Chr8:84748570-84748589 MsG0880047330.01.T01:intron 45.0%
CCAGATCACTTACCCTTCAA+AGG - Chr8:84753619-84753638 MsG0880047330.01.T01:intron 45.0%
CCTAAGATCTGTAATGTCCC+CGG - Chr8:84753388-84753407 MsG0880047330.01.T01:intron 45.0%
CCTTCTTCTCCTTGAGGTAT+TGG + Chr8:84748573-84748592 None:intergenic 45.0%
CTCTTCAGCAAGCCTAGAAT+TGG + Chr8:84755405-84755424 None:intergenic 45.0%
CTGTGGATTCTTTGTCTCCA+AGG - Chr8:84754350-84754369 MsG0880047330.01.T01:intron 45.0%
CTTCGACGCAAGCAAAATCA+AGG - Chr8:84755102-84755121 MsG0880047330.01.T01:intron 45.0%
CTTGGAGACAAAGAATCCAC+AGG + Chr8:84754352-84754371 None:intergenic 45.0%
GACAAATGACAGACGTCGTA+TGG + Chr8:84753493-84753512 None:intergenic 45.0%
GAGAAGAAGGGTAGTTTCGA+AGG - Chr8:84748583-84748602 MsG0880047330.01.T01:intron 45.0%
GGAAGACACTCAAGCAATCA+GGG - Chr8:84750182-84750201 MsG0880047330.01.T01:intron 45.0%
GGTGGTTGAAGACTCATATC+AGG + Chr8:84754651-84754670 None:intergenic 45.0%
GTGACCTTAACTCAGTTGGT+AGG + Chr8:84751107-84751126 None:intergenic 45.0%
GTTGTGCTCATGCTCTTACA+AGG + Chr8:84755205-84755224 None:intergenic 45.0%
TACACCACTTTGCGGGAATT+TGG + Chr8:84752580-84752599 None:intergenic 45.0%
TAGGACCGGACCATAATAGT+TGG + Chr8:84753234-84753253 None:intergenic 45.0%
TAGGCCAAACAACATCACTC+AGG + Chr8:84755553-84755572 None:intergenic 45.0%
TCAGCAAGCCTAGAATTGGA+TGG + Chr8:84755401-84755420 None:intergenic 45.0%
TCATAGTCAAGAACCACGAG+AGG - Chr8:84755162-84755181 MsG0880047330.01.T01:intron 45.0%
TCATGGAGAAAAGGAAAGCC+AGG - Chr8:84754836-84754855 MsG0880047330.01.T01:intron 45.0%
TCGACTTCATCGGACATTTC+TGG - Chr8:84748478-84748497 MsG0880047330.01.T01:CDS 45.0%
TGATCCAAATTCCCGCAAAG+TGG - Chr8:84752573-84752592 MsG0880047330.01.T01:intron 45.0%
TGCATGCGTTGTGAAGGTTA+AGG + Chr8:84748609-84748628 None:intergenic 45.0%
TTACCAGTTAGTGTAGGAGG+TGG + Chr8:84754669-84754688 None:intergenic 45.0%
TTAGCACCTAACACAAGCCA+TGG + Chr8:84749888-84749907 None:intergenic 45.0%
TTAGTGAGGGAGGTTGTTGA+GGG + Chr8:84749232-84749251 None:intergenic 45.0%
! ATTTGTCTGAGAGGCATACC+TGG + Chr8:84754857-84754876 None:intergenic 45.0%
! CCTTTGAAGGGTAAGTGATC+TGG + Chr8:84753622-84753641 None:intergenic 45.0%
! CTTGATTTTGCTTGCGTCGA+AGG + Chr8:84755104-84755123 None:intergenic 45.0%
! GTTTTCCGCGGTTTCAAAAG+TGG - Chr8:84752679-84752698 MsG0880047330.01.T01:intron 45.0%
! TGACTTGGGGCCAACTATTA+TGG - Chr8:84753221-84753240 MsG0880047330.01.T01:intron 45.0%
!! AGCTTCACTTCGTCGATTCA+TGG - Chr8:84749414-84749433 MsG0880047330.01.T01:intron 45.0%
!! GACATAATGGACCTAGAGGA+AGG - Chr8:84753291-84753310 MsG0880047330.01.T01:intron 45.0%
!! TTCGTCGATTCATGGAGAAG+AGG - Chr8:84749422-84749441 MsG0880047330.01.T01:intron 45.0%
!! TTTTTAAGCGGGGTCACATG+TGG + Chr8:84753043-84753062 None:intergenic 45.0%
!!! GTATGCCACTTTTGAAACCG+CGG + Chr8:84752687-84752706 None:intergenic 45.0%
!!! GTTTTTCGGTGTCACGTTTG+TGG + Chr8:84748910-84748929 None:intergenic 45.0%
!! AAAAAATAAATAAAAAACAA+AGG + Chr8:84751233-84751252 None:intergenic 5.0%
!! AATAACAATATTATTAAATT+AGG + Chr8:84749775-84749794 None:intergenic 5.0%
!! AATTTAAATAATTCAATTAT+AGG - Chr8:84752615-84752634 MsG0880047330.01.T01:intron 5.0%
!! CAATTTAATAAAAAAAAAAA+AGG + Chr8:84751684-84751703 None:intergenic 5.0%
!! TAAAAATAATAAACAAAAAA+AGG + Chr8:84749964-84749983 None:intergenic 5.0%
!!! ATTGAATTATTTAAATTTTT+TGG + Chr8:84752612-84752631 None:intergenic 5.0%
!!! CTATTTTTATTTTATTTTAA+CGG + Chr8:84750219-84750238 None:intergenic 5.0%
!!! TTGAATTATTTAAATTTTTT+GGG + Chr8:84752611-84752630 None:intergenic 5.0%
!!! TTTATTATTTTTATTTTGAT+CGG - Chr8:84749971-84749990 MsG0880047330.01.T01:intron 5.0%
AACTAACCCGTGCTAAGCAC+GGG + Chr8:84752366-84752385 None:intergenic 50.0%
ACCTAACACAAGCCATGGAG+CGG + Chr8:84749883-84749902 None:intergenic 50.0%
AGCTCCTCAACTTTCTCAGC+AGG + Chr8:84749159-84749178 None:intergenic 50.0%
AGCTCCTCAACTTTGTCAGC+AGG + Chr8:84754588-84754607 None:intergenic 50.0%
ATTATGGTCCGGTCCTAGCT+TGG - Chr8:84753237-84753256 MsG0880047330.01.T01:intron 50.0%
CAACCACCTCCTACACTAAC+TGG - Chr8:84754663-84754682 MsG0880047330.01.T01:intron 50.0%
CAACTAACCCGTGCTAAGCA+CGG + Chr8:84752367-84752386 None:intergenic 50.0%
CAATCTACAGGGTCATCACC+TGG - Chr8:84748846-84748865 MsG0880047330.01.T01:intron 50.0%
CACGGTTCAAACCATCAACG+AGG + Chr8:84754183-84754202 None:intergenic 50.0%
CCAACTGAGTTAAGGTCACG+AGG - Chr8:84751108-84751127 MsG0880047330.01.T01:intron 50.0%
CCACGATGAAGAGGAAGAAG+AGG - Chr8:84753678-84753697 MsG0880047330.01.T01:intron 50.0%
CCAGAGTGAGAAGATGAACC+AGG + Chr8:84748867-84748886 None:intergenic 50.0%
CCGGGGACATTACAGATCTT+AGG + Chr8:84753391-84753410 None:intergenic 50.0%
CCTCGTGACCTTAACTCAGT+TGG + Chr8:84751111-84751130 None:intergenic 50.0%
CCTCTTCTTCCTCTTCATCG+TGG + Chr8:84753681-84753700 None:intergenic 50.0%
CCTGGTTCATCTTCTCACTC+TGG - Chr8:84748864-84748883 MsG0880047330.01.T01:intron 50.0%
CGTGTGGAGGAAGAAGAAGA+TGG - Chr8:84753860-84753879 MsG0880047330.01.T01:intron 50.0%
GAGGGAATTAGACCTGACTC+AGG - Chr8:84751305-84751324 MsG0880047330.01.T01:intron 50.0%
GCATGCACCCCTGAAACAAA+TGG - Chr8:84748622-84748641 MsG0880047330.01.T01:intron 50.0%
TGGGGCCAACTATTATGGTC+CGG - Chr8:84753226-84753245 MsG0880047330.01.T01:intron 50.0%
TGGGTCACTACACCACTTTG+CGG + Chr8:84752588-84752607 None:intergenic 50.0%
! ATGCCTTTTGTTAGTGGCCG+GGG + Chr8:84753408-84753427 None:intergenic 50.0%
! CGATGCCTTTTGTTAGTGGC+CGG + Chr8:84753410-84753429 None:intergenic 50.0%
! CTGGCCTTTCTTTGTGTGAC+TGG - Chr8:84749625-84749644 MsG0880047330.01.T01:CDS 50.0%
! GATGCCTTTTGTTAGTGGCC+GGG + Chr8:84753409-84753428 None:intergenic 50.0%
! GCGCTCCTTTTCTTTTGCTG+AGG - Chr8:84750161-84750180 MsG0880047330.01.T01:intron 50.0%
!! TGTGTTTTGGGCCTTCCTCT+AGG + Chr8:84753305-84753324 None:intergenic 50.0%
!! TTCTGGAGCAGAGTCAGGAA+AGG + Chr8:84749847-84749866 None:intergenic 50.0%
!!! TGCTTTTCTGGAGCAGAGTC+AGG + Chr8:84749852-84749871 None:intergenic 50.0%
AAGGTCCGGGGTTCAAACCT+CGG + Chr8:84751065-84751084 None:intergenic 55.0%
AATTAGCCCGTGCGAAGCAC+GGG - Chr8:84752340-84752359 MsG0880047330.01.T01:intron 55.0%
CATGTGCACCAAGCTAGGAC+CGG + Chr8:84753248-84753267 None:intergenic 55.0%
CCATGCACCCCCAAATCACA+TGG - Chr8:84753642-84753661 MsG0880047330.01.T01:intron 55.0%
CTTCTTCTTCCTCCACACGG+TGG + Chr8:84753859-84753878 None:intergenic 55.0%
CTTGGTTTCGCGCCCGTATA+CGG + Chr8:84751432-84751451 None:intergenic 55.0%
GAATTAGCCCGTGCGAAGCA+CGG - Chr8:84752339-84752358 MsG0880047330.01.T01:intron 55.0%
GGGTCACTACACCACTTTGC+GGG + Chr8:84752587-84752606 None:intergenic 55.0%
GTAATTTCTCGCTCCGCCAC+AGG + Chr8:84752486-84752505 None:intergenic 55.0%
TGTCCCCGGCCACTAACAAA+AGG - Chr8:84753402-84753421 MsG0880047330.01.T01:intron 55.0%
TTAAGCGGGGTCACATGTGG+CGG + Chr8:84753040-84753059 None:intergenic 55.0%
TTGGTTTCGCGCCCGTATAC+GGG + Chr8:84751431-84751450 None:intergenic 55.0%
! CCATGTGATTTGGGGGTGCA+TGG + Chr8:84753645-84753664 None:intergenic 55.0%
! CGCCCGTATACGGGTTTGTT+AGG + Chr8:84751422-84751441 None:intergenic 55.0%
! GCGGAGTCAGCATGCTTTTC+TGG + Chr8:84749864-84749883 None:intergenic 55.0%
! TCCGCTCCATGGCTTGTGTT+AGG - Chr8:84749879-84749898 MsG0880047330.01.T01:intron 55.0%
! TCGCACGGGCTAATTCGAAG+CGG + Chr8:84752335-84752354 None:intergenic 55.0%
!! GGTCCTAGCTTGGTGCACAT+GGG - Chr8:84753247-84753266 MsG0880047330.01.T01:intron 55.0%
!! GTCCTAGCTTGGTGCACATG+GGG - Chr8:84753248-84753267 MsG0880047330.01.T01:intron 55.0%
GACCCCATGTGCACCAAGCT+AGG + Chr8:84753253-84753272 None:intergenic 60.0%
TGTGGCCGAGGTTTGAACCC+CGG - Chr8:84751057-84751076 MsG0880047330.01.T01:intron 60.0%
! CACGGGCTAATTCGAAGCGG+GGG + Chr8:84752332-84752351 None:intergenic 60.0%
! CAGGGGTGCATGCGTTGTGA+AGG + Chr8:84748615-84748634 None:intergenic 60.0%
! CGCACGGGCTAATTCGAAGC+GGG + Chr8:84752334-84752353 None:intergenic 60.0%
! GCACGGGCTAATTCGAAGCG+GGG + Chr8:84752333-84752352 None:intergenic 60.0%
! GGGGGTGCATGGCCTTTGAA+GGG + Chr8:84753634-84753653 None:intergenic 60.0%
! TGGCGGACGTAGTCGTTGGA+AGG + Chr8:84753473-84753492 None:intergenic 60.0%
! TGGGGGTGCATGGCCTTTGA+AGG + Chr8:84753635-84753654 None:intergenic 60.0%
!! AGCATGCTGACTCCGCTCCA+TGG - Chr8:84749868-84749887 MsG0880047330.01.T01:intron 60.0%
!! CGGTCCTAGCTTGGTGCACA+TGG - Chr8:84753246-84753265 MsG0880047330.01.T01:intron 60.0%
!! CGTATGGCGGACGTAGTCGT+TGG + Chr8:84753477-84753496 None:intergenic 60.0%
CACGGGCCCGTGCTTAGCAC+GGG - Chr8:84752357-84752376 MsG0880047330.01.T01:intron 70.0%
GCACGGGCCCGTGCTTAGCA+CGG - Chr8:84752356-84752375 MsG0880047330.01.T01:intron 70.0%
CACGGGCCCGTGCTTCGCAC+GGG + Chr8:84752349-84752368 None:intergenic 75.0%
GCACGGGCCCGTGCTTCGCA+CGG + Chr8:84752350-84752369 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 84748475 84755703 84748475 ID=MsG0880047330.01;Name=MsG0880047330.01
Chr8 mRNA 84748475 84755703 84748475 ID=MsG0880047330.01.T01;Parent=MsG0880047330.01;Name=MsG0880047330.01.T01;_AED=0.51;_eAED=0.54;_QI=0|0|0|1|0.57|0.62|8|0|337
Chr8 exon 84755535 84755703 84755535 ID=MsG0880047330.01.T01:exon:1615;Parent=MsG0880047330.01.T01
Chr8 exon 84755220 84755322 84755220 ID=MsG0880047330.01.T01:exon:1614;Parent=MsG0880047330.01.T01
Chr8 exon 84754964 84755107 84754964 ID=MsG0880047330.01.T01:exon:1613;Parent=MsG0880047330.01.T01
Chr8 exon 84754726 84754845 84754726 ID=MsG0880047330.01.T01:exon:1612;Parent=MsG0880047330.01.T01
Chr8 exon 84754265 84754363 84754265 ID=MsG0880047330.01.T01:exon:1611;Parent=MsG0880047330.01.T01
Chr8 exon 84749494 84749726 84749494 ID=MsG0880047330.01.T01:exon:1610;Parent=MsG0880047330.01.T01
Chr8 exon 84749321 84749381 84749321 ID=MsG0880047330.01.T01:exon:1609;Parent=MsG0880047330.01.T01
Chr8 exon 84748475 84748559 84748475 ID=MsG0880047330.01.T01:exon:1608;Parent=MsG0880047330.01.T01
Chr8 CDS 84755535 84755703 84755535 ID=MsG0880047330.01.T01:cds;Parent=MsG0880047330.01.T01
Chr8 CDS 84755220 84755322 84755220 ID=MsG0880047330.01.T01:cds;Parent=MsG0880047330.01.T01
Chr8 CDS 84754964 84755107 84754964 ID=MsG0880047330.01.T01:cds;Parent=MsG0880047330.01.T01
Chr8 CDS 84754726 84754845 84754726 ID=MsG0880047330.01.T01:cds;Parent=MsG0880047330.01.T01
Chr8 CDS 84754265 84754363 84754265 ID=MsG0880047330.01.T01:cds;Parent=MsG0880047330.01.T01
Chr8 CDS 84749494 84749726 84749494 ID=MsG0880047330.01.T01:cds;Parent=MsG0880047330.01.T01
Chr8 CDS 84749321 84749381 84749321 ID=MsG0880047330.01.T01:cds;Parent=MsG0880047330.01.T01
Chr8 CDS 84748475 84748559 84748475 ID=MsG0880047330.01.T01:cds;Parent=MsG0880047330.01.T01
Gene Sequence

>MsG0880047330.01.T01

ATGTCGACTTCATCGGACATTTCTGGTTTTTCCGGCAACAAACTGATAAAGTCGTCGGAGAAACCTACGTTTTCTCAAACTTGTAATCTATTGAGCCAATACCTCAAGGAGAAGAAGGGTAGTTTCGAAGGCCTTAACCTTCACAACGCATGCACCCCTGAAACAAATGGGTCATCACCTGGTTCATCTTCTCACTCTGGAATAACCATGGATTTATTTCCCACAAACGTGACACCGAAAAACCTTACAACTATGGATTTTTTCTTTCCAAGAGTTATTAATCCTATGGTTAAAGAGCCAGAAACTGCACAATTGACAATGTTTTATAATGGACAAGTTATTGTGTTGGATGATTTTCCTGCTGAGAAAGTTGAGGAGCTGAAATCATTTGCTAGAACTCAGACTCAGCATTCATTGGATGAATTTTTTATTTTATTTATTTTTAATTTAACTGATGGTAAATTGAATTTCATTGCAGATATGCCAATTGCTAGAAAAGCTTCACTTCGTCGATTCATGGAGAAGAGGAAAGATAGAGTTTCTGCCTACTCACCATATCAAAGAACCTTTCCTGACTCTGCTCCAGAAAAGCATGCTGACTCCGCTCCATGGCTTGTGTTAGGTGCTAAATCAATTGTTCATTTTCATAATGATTCACACACAATCTTGTTCTTTTTTTACAGAACTAATAACTCAATGGTTAACAAACCGGAAACTGCACAGTTGACATTGTTTTATAATGGAGAAGTTATTGTATTGGATGATTTTCCTGCTGACAAAGTTGAGGAGCTTAAGTCATTTGCAAGCACTCAAACTCGGCCTTCAGTTATTCCTGATATGAGTCTTCAACCACCTCCTACACTAACTGAAGATATGGTAATTGCTAGAAAAGCTTCACTTCTTCGATTCATGGAGAAAAGGAAAGCCAGAGTTTCTGCCAAATCACCATATCAAAGAAGCGATTCCGACTCTGCTCCAAAAAAACCTACTGAATCCACTCCATACTTGTTTTAG
Protein sequence

>MsG0880047330.01.T01

MSTSSDISGFSGNKLIKSSEKPTFSQTCNLLSQYLKEKKGSFEGLNLHNACTPETNGSSPGSSSHSGITMDLFPTNVTPKNLTTMDFFFPRVINPMVKEPETAQLTMFYNGQVIVLDDFPAEKVEELKSFARTQTQHSLDEFFILFIFNLTDGKLNFIADMPIARKASLRRFMEKRKDRVSAYSPYQRTFPDSAPEKHADSAPWLVLGAKSIVHFHNDSHTILFFFYRTNNSMVNKPETAQLTLFYNGEVIVLDDFPADKVEELKSFASTQTRPSVIPDMSLQPPPTLTEDMVIARKASLLRFMEKRKARVSAKSPYQRSDSDSAPKKPTESTPYLF*