Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008590.01.T01 | XP_003595389.1 | 92.823 | 209 | 12 | 2 | 1 | 208 | 1 | 207 | 1.29E-134 | 386 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008590.01.T01 | Q9C5K8 | 54.237 | 118 | 42 | 5 | 57 | 170 | 57 | 166 | 1.40E-29 | 111 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008590.01.T01 | A2Q3Z0 | 92.823 | 209 | 12 | 2 | 1 | 208 | 1 | 207 | 6.16e-135 | 386 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048482.01 | MsG0280008590.01 | 0.813816 | 2.113643e-51 | 1.394529e-48 |
MsG0180000259.01 | MsG0280008590.01 | 0.823217 | 1.559546e-53 | 1.334444e-50 |
MsG0180000479.01 | MsG0280008590.01 | 0.813568 | 2.396809e-51 | 1.570749e-48 |
MsG0180000729.01 | MsG0280008590.01 | 0.852146 | 5.590626e-61 | 1.157362e-57 |
MsG0180003690.01 | MsG0280008590.01 | 0.865097 | 7.559028e-65 | 2.429629e-61 |
MsG0180003948.01 | MsG0280008590.01 | 0.823258 | 1.526032e-53 | 1.307270e-50 |
MsG0180004147.01 | MsG0280008590.01 | 0.804709 | 1.896645e-49 | 9.847943e-47 |
MsG0180004258.01 | MsG0280008590.01 | 0.810830 | 9.483415e-51 | 5.776752e-48 |
MsG0180004300.01 | MsG0280008590.01 | 0.852787 | 3.670278e-61 | 7.757557e-58 |
MsG0180004388.01 | MsG0280008590.01 | 0.818174 | 2.248800e-52 | 1.671107e-49 |
MsG0180004495.01 | MsG0280008590.01 | 0.812220 | 4.730761e-51 | 2.990434e-48 |
MsG0180005172.01 | MsG0280008590.01 | 0.829308 | 5.534712e-55 | 5.644174e-52 |
MsG0180005692.01 | MsG0280008590.01 | 0.804979 | 1.665807e-49 | 8.709887e-47 |
MsG0180006235.01 | MsG0280008590.01 | 0.818983 | 1.474052e-52 | 1.120261e-49 |
MsG0280006295.01 | MsG0280008590.01 | 0.810463 | 1.138513e-50 | 6.867162e-48 |
MsG0280006420.01 | MsG0280008590.01 | 0.821037 | 4.994258e-53 | 4.018513e-50 |
MsG0280006425.01 | MsG0280008590.01 | 0.827086 | 1.900067e-54 | 1.815610e-51 |
MsG0280006436.01 | MsG0280008590.01 | 0.855954 | 4.459694e-62 | 1.047511e-58 |
MsG0280006586.01 | MsG0280008590.01 | 0.843861 | 1.079804e-58 | 1.712165e-55 |
MsG0280008270.01 | MsG0280008590.01 | 0.802625 | 5.132415e-49 | 2.526125e-46 |
MsG0280008280.01 | MsG0280008590.01 | 0.836398 | 9.577317e-57 | 1.205506e-53 |
MsG0280008590.01 | MsG0280008856.01 | 0.870535 | 1.355695e-66 | 5.292545e-63 |
MsG0280008590.01 | MsG0280008887.01 | 0.823156 | 1.611826e-53 | 1.376845e-50 |
MsG0280008590.01 | MsG0280009514.01 | 0.857519 | 1.544684e-62 | 3.822963e-59 |
MsG0280008590.01 | MsG0280009817.01 | 0.830517 | 2.809678e-55 | 2.966895e-52 |
MsG0280008590.01 | MsG0280009835.01 | 0.807904 | 4.024758e-50 | 2.268934e-47 |
MsG0280008590.01 | MsG0280010459.01 | 0.813330 | 2.703891e-51 | 1.760541e-48 |
MsG0280008590.01 | MsG0280010614.01 | 0.828064 | 1.106455e-54 | 1.087876e-51 |
MsG0280008590.01 | MsG0280010779.01 | 0.813247 | 2.818862e-51 | 1.831174e-48 |
MsG0280008590.01 | MsG0280010785.01 | 0.809680 | 1.678510e-50 | 9.918977e-48 |
MsG0280008590.01 | MsG0280010824.01 | 0.830962 | 2.185286e-55 | 2.338185e-52 |
MsG0280008590.01 | MsG0280010868.01 | 0.833240 | 5.973618e-56 | 6.838846e-53 |
MsG0280008590.01 | MsG0380013185.01 | 0.811917 | 5.507037e-51 | 3.452267e-48 |
MsG0280008590.01 | MsG0380013480.01 | 0.832187 | 1.090655e-55 | 1.209957e-52 |
MsG0280008590.01 | MsG0380014218.01 | 0.819114 | 1.376208e-52 | 1.049590e-49 |
MsG0280008590.01 | MsG0380014573.01 | 0.802222 | 6.213832e-49 | 3.027098e-46 |
MsG0280008590.01 | MsG0380015455.01 | 0.832258 | 1.047480e-55 | 1.164413e-52 |
MsG0280008590.01 | MsG0380015468.01 | 0.805256 | 1.457206e-49 | 7.673129e-47 |
MsG0280008590.01 | MsG0380016018.01 | 0.817885 | 2.614425e-52 | 1.927413e-49 |
MsG0280008590.01 | MsG0380016553.01 | 0.829686 | 4.479797e-55 | 4.618724e-52 |
MsG0280008590.01 | MsG0380017203.01 | 0.847575 | 1.060041e-59 | 1.892435e-56 |
MsG0280008590.01 | MsG0380017946.01 | 0.820673 | 6.056150e-53 | 4.822947e-50 |
MsG0280008590.01 | MsG0480018780.01 | 0.850417 | 1.720880e-60 | 3.368910e-57 |
MsG0280008590.01 | MsG0480019034.01 | 0.828027 | 1.129088e-54 | 1.108970e-51 |
MsG0280008590.01 | MsG0480019056.01 | 0.822393 | 2.426048e-53 | 2.028193e-50 |
MsG0280008590.01 | MsG0480021441.01 | 0.826136 | 3.201839e-54 | 2.977007e-51 |
MsG0280008590.01 | MsG0480022273.01 | 0.819718 | 1.002731e-52 | 7.776835e-50 |
MsG0280008590.01 | MsG0480022331.01 | 0.817569 | 3.081050e-52 | 2.251779e-49 |
MsG0280008590.01 | MsG0480022479.01 | 0.822806 | 1.945348e-53 | 1.645367e-50 |
MsG0280008590.01 | MsG0480022480.01 | 0.828765 | 7.492553e-55 | 7.517916e-52 |
MsG0280008590.01 | MsG0480022486.01 | 0.812993 | 3.205175e-51 | 2.067986e-48 |
MsG0280008590.01 | MsG0480022520.01 | 0.828434 | 9.008788e-55 | 8.953715e-52 |
MsG0280008590.01 | MsG0480022663.01 | 0.811710 | 6.110088e-51 | 3.809285e-48 |
MsG0280008590.01 | MsG0480023410.01 | 0.818264 | 2.146164e-52 | 1.598691e-49 |
MsG0280008590.01 | MsG0480023903.01 | 0.816818 | 4.546307e-52 | 3.255042e-49 |
MsG0280008590.01 | MsG0580024035.01 | 0.832026 | 1.195233e-55 | 1.319828e-52 |
MsG0280008590.01 | MsG0580024383.01 | 0.809531 | 1.807088e-50 | 1.063636e-47 |
MsG0280008590.01 | MsG0580024393.01 | 0.804086 | 2.556773e-49 | 1.306432e-46 |
MsG0280008590.01 | MsG0580024467.01 | 0.809596 | 1.749728e-50 | 1.031692e-47 |
MsG0280008590.01 | MsG0580024478.01 | 0.838380 | 2.976140e-57 | 3.979133e-54 |
MsG0280008590.01 | MsG0580024563.01 | 0.820413 | 6.951038e-53 | 5.496450e-50 |
MsG0280008590.01 | MsG0580024682.01 | 0.802243 | 6.154775e-49 | 2.999956e-46 |
MsG0280008590.01 | MsG0580025352.01 | 0.803537 | 3.324589e-49 | 1.675019e-46 |
MsG0280008590.01 | MsG0580027049.01 | 0.823656 | 1.231713e-53 | 1.067198e-50 |
MsG0280008590.01 | MsG0580027208.01 | 0.824480 | 7.890126e-54 | 6.997023e-51 |
MsG0280008590.01 | MsG0580027954.01 | 0.805750 | 1.147980e-49 | 6.122785e-47 |
MsG0280008590.01 | MsG0580027993.01 | 0.829575 | 4.766322e-55 | 4.897711e-52 |
MsG0280008590.01 | MsG0580028307.01 | 0.848989 | 4.312608e-60 | 8.057244e-57 |
MsG0280008590.01 | MsG0580029169.01 | 0.806003 | 1.015606e-49 | 5.451929e-47 |
MsG0280008590.01 | MsG0580029189.01 | 0.809693 | 1.668358e-50 | 9.862170e-48 |
MsG0280008590.01 | MsG0580029278.01 | 0.841088 | 5.873594e-58 | 8.535801e-55 |
MsG0280008590.01 | MsG0580029356.01 | 0.802462 | 5.547266e-49 | 2.718962e-46 |
MsG0280008590.01 | MsG0580029672.01 | 0.816796 | 4.598196e-52 | 3.290138e-49 |
MsG0280008590.01 | MsG0580029950.01 | 0.802824 | 4.669292e-49 | 2.310063e-46 |
MsG0280008590.01 | MsG0580029960.01 | 0.834892 | 2.304701e-56 | 2.772311e-53 |
MsG0280008590.01 | MsG0680031384.01 | 0.800626 | 1.319420e-48 | 6.172954e-46 |
MsG0280008590.01 | MsG0680031386.01 | 0.800332 | 1.514386e-48 | 7.032711e-46 |
MsG0280008590.01 | MsG0680035681.01 | 0.811438 | 7.001323e-51 | 4.333974e-48 |
MsG0280008590.01 | MsG0780036852.01 | 0.831032 | 2.100813e-55 | 2.252339e-52 |
MsG0280008590.01 | MsG0780038205.01 | 0.826967 | 2.028375e-54 | 1.931523e-51 |
MsG0280008590.01 | MsG0780038857.01 | 0.827449 | 1.554661e-54 | 1.501451e-51 |
MsG0280008590.01 | MsG0780039249.01 | 0.806301 | 8.793282e-50 | 4.756010e-47 |
MsG0280008590.01 | MsG0780039252.01 | 0.801630 | 8.221937e-49 | 3.945505e-46 |
MsG0280008590.01 | MsG0780039389.01 | 0.809338 | 1.987632e-50 | 1.163910e-47 |
MsG0280008590.01 | MsG0780039430.01 | 0.831978 | 1.228222e-55 | 1.354439e-52 |
MsG0280008590.01 | MsG0780040030.01 | 0.802259 | 6.107199e-49 | 2.977994e-46 |
MsG0280008590.01 | MsG0780040060.01 | 0.807764 | 4.309229e-50 | 2.420613e-47 |
MsG0280008590.01 | MsG0780040488.01 | 0.830369 | 3.053407e-55 | 3.210688e-52 |
MsG0280008590.01 | MsG0780040601.01 | 0.824304 | 8.676650e-54 | 7.655423e-51 |
MsG0280008590.01 | MsG0780041641.01 | 0.841101 | 5.829015e-58 | 8.474441e-55 |
MsG0280008590.01 | MsG0780041787.01 | 0.803666 | 3.126726e-49 | 1.580411e-46 |
MsG0280008590.01 | MsG0880042967.01 | 0.808107 | 3.644063e-50 | 2.065459e-47 |
MsG0280008590.01 | MsG0880043166.01 | 0.813650 | 2.298450e-51 | 1.509684e-48 |
MsG0280008590.01 | MsG0880043262.01 | 0.846513 | 2.072650e-59 | 3.576356e-56 |
MsG0280008590.01 | MsG0880043299.01 | 0.808697 | 2.726358e-50 | 1.569366e-47 |
MsG0280008590.01 | MsG0880043516.01 | 0.821211 | 4.554870e-53 | 3.682526e-50 |
MsG0280008590.01 | MsG0880043537.01 | 0.831865 | 1.310065e-55 | 1.439941e-52 |
MsG0280008590.01 | MsG0880043921.01 | 0.855383 | 6.546413e-62 | 1.508754e-58 |
MsG0280008590.01 | MsG0880044917.01 | 0.818961 | 1.491650e-52 | 1.132908e-49 |
MsG0280008590.01 | MsG0880045099.01 | 0.801787 | 7.637101e-49 | 3.679477e-46 |
MsG0280008590.01 | MsG0880045429.01 | 0.818841 | 1.588025e-52 | 1.202047e-49 |
MsG0280008590.01 | MsG0880046467.01 | 0.803214 | 3.879636e-49 | 1.938382e-46 |
MsG0280008590.01 | MsG0880046615.01 | 0.842224 | 2.946400e-58 | 4.437158e-55 |
MsG0280008590.01 | MsG0880046669.01 | 0.822302 | 2.547530e-53 | 2.124098e-50 |
MsG0280008590.01 | MsG0880046753.01 | 0.832401 | 9.654643e-56 | 1.077952e-52 |
MsG0280008590.01 | MsG0880046779.01 | 0.803289 | 3.743584e-49 | 1.873973e-46 |
MsG0280008590.01 | MsG0880047012.01 | 0.802653 | 5.065308e-49 | 2.494790e-46 |
MsG0280008590.01 | MsG0880047293.01 | 0.815095 | 1.101643e-51 | 7.523844e-49 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0280008590.01 | MsG0880047330.01 | PPI |
MsG0280008590.01 | MsG0280008436.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008590.01.T01 | MTR_2g044910 | 92.823 | 209 | 12 | 2 | 1 | 208 | 1 | 207 | 1.56e-138 | 386 |
MsG0280008590.01.T01 | MTR_2g044910 | 92.771 | 166 | 10 | 1 | 43 | 208 | 1 | 164 | 5.59e-110 | 312 |
MsG0280008590.01.T01 | MTR_2g044910 | 84.615 | 156 | 16 | 4 | 1 | 153 | 1 | 151 | 3.31e-84 | 247 |
MsG0280008590.01.T01 | MTR_4g124360 | 58.209 | 134 | 48 | 3 | 37 | 167 | 25 | 153 | 4.73e-43 | 143 |
MsG0280008590.01.T01 | MTR_4g124360 | 58.088 | 136 | 48 | 4 | 51 | 183 | 1 | 130 | 1.43e-39 | 132 |
MsG0280008590.01.T01 | MTR_5g013515 | 33.846 | 130 | 55 | 4 | 56 | 175 | 13 | 121 | 1.79e-15 | 70.5 |
MsG0280008590.01.T01 | MTR_2g042900 | 31.250 | 128 | 65 | 3 | 57 | 167 | 112 | 233 | 5.62e-14 | 68.9 |
MsG0280008590.01.T01 | MTR_5g013530 | 29.825 | 114 | 63 | 2 | 57 | 170 | 22 | 118 | 5.05e-12 | 61.6 |
MsG0280008590.01.T01 | MTR_4g124960 | 32.231 | 121 | 45 | 4 | 49 | 167 | 91 | 176 | 6.59e-12 | 62.4 |
MsG0280008590.01.T01 | MTR_5g013530 | 29.825 | 114 | 63 | 2 | 57 | 170 | 44 | 140 | 1.22e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008590.01.T01 | AT5G20900 | 54.237 | 118 | 42 | 5 | 57 | 170 | 57 | 166 | 1.42e-30 | 111 |
MsG0280008590.01.T01 | AT3G43440 | 38.760 | 129 | 53 | 4 | 56 | 182 | 130 | 234 | 7.06e-15 | 71.2 |
MsG0280008590.01.T01 | AT3G43440 | 36.154 | 130 | 57 | 4 | 55 | 182 | 43 | 148 | 2.79e-14 | 67.8 |
MsG0280008590.01.T01 | AT1G74950 | 35.484 | 124 | 51 | 3 | 58 | 167 | 120 | 228 | 3.78e-13 | 66.6 |
MsG0280008590.01.T01 | AT1G19180 | 34.746 | 118 | 61 | 4 | 53 | 167 | 56 | 160 | 2.35e-12 | 63.5 |
MsG0280008590.01.T01 | AT1G19180 | 34.746 | 118 | 61 | 4 | 53 | 167 | 122 | 226 | 4.40e-12 | 63.5 |
MsG0280008590.01.T01 | AT1G19180 | 34.746 | 118 | 61 | 4 | 53 | 167 | 122 | 226 | 4.40e-12 | 63.5 |
Find 55 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAAGAAGAGAATTATTTA+AGG | 0.202725 | 2:-34426277 | None:intergenic |
CAGCTTACCATCTTCTATAA+TGG | 0.263317 | 2:+34428852 | MsG0280008590.01.T01:CDS |
TAATTCTCTTCTTTCAGTTT+TGG | 0.266561 | 2:+34426284 | MsG0280008590.01.T01:five_prime_UTR |
TTCTTTCACCTGTTCCTTCA+AGG | 0.283604 | 2:+34429104 | MsG0280008590.01.T01:CDS |
GAATCTTCTATTGCTGTTGA+TGG | 0.327998 | 2:+34426382 | MsG0280008590.01.T01:CDS |
TCCTTCATTGAAACCGAATC+TGG | 0.348326 | 2:-34429558 | None:intergenic |
TTGAGCAGAATTCTAGTGTT+TGG | 0.362255 | 2:+34429617 | MsG0280008590.01.T01:exon |
TTTAGGTCAATGCCAGCATC+TGG | 0.377821 | 2:+34428801 | MsG0280008590.01.T01:intron |
TGCTGACAATTCGCCAGATT+CGG | 0.379407 | 2:+34429545 | MsG0280008590.01.T01:CDS |
TTATCATTTATGTGTTCTTT+CGG | 0.382375 | 2:+34429640 | MsG0280008590.01.T01:three_prime_UTR |
AGTGAATGTCTGCGTGCTAT+TGG | 0.383673 | 2:-34429340 | None:intergenic |
CTGCAGATAGAATTCTTTGC+AGG | 0.395317 | 2:-34429184 | None:intergenic |
TGAGTTGTATTAGCAATCAT+TGG | 0.398568 | 2:-34428831 | None:intergenic |
AGCTTACCATCTTCTATAAT+GGG | 0.398580 | 2:+34428853 | MsG0280008590.01.T01:CDS |
GAAAGAAGAGAATTATTTAA+GGG | 0.411915 | 2:-34426276 | None:intergenic |
GCCAGATTCGGTTTCAATGA+AGG | 0.420770 | 2:+34429557 | MsG0280008590.01.T01:CDS |
ATTGGATTCGTTCCAGATGC+TGG | 0.436562 | 2:-34428813 | None:intergenic |
AATGGATGGTGTTACTGTTA+AGG | 0.443386 | 2:+34426333 | MsG0280008590.01.T01:exon |
ACTTCAAAGTTGCATCTCTC+TGG | 0.448576 | 2:+34429769 | MsG0280008590.01.T01:three_prime_UTR |
GCTAGTTCCAACATGGTTGA+GGG | 0.452791 | 2:+34426406 | MsG0280008590.01.T01:CDS |
ATTTATGTGTTCTTTCGGTA+AGG | 0.456656 | 2:+34429645 | MsG0280008590.01.T01:three_prime_UTR |
ACAGGTGAAAGAACGGGAAC+GGG | 0.457084 | 2:-34429094 | None:intergenic |
ATAGAATTCTTTGCAGGAAA+GGG | 0.465810 | 2:-34429178 | None:intergenic |
ATTATCGAACATCAACTCAT+TGG | 0.468245 | 2:-34429879 | None:intergenic |
CTTCTTTGTTTCACTAGACT+TGG | 0.473413 | 2:-34429056 | None:intergenic |
TGATGGAATTCCTGCAGAAA+AGG | 0.477638 | 2:+34428890 | MsG0280008590.01.T01:CDS |
GGGAGTATTTGTATCTATGA+TGG | 0.478209 | 2:+34428873 | MsG0280008590.01.T01:CDS |
TGCTAGTTCCAACATGGTTG+AGG | 0.478224 | 2:+34426405 | MsG0280008590.01.T01:CDS |
GCAGTTCCATGTGGCGAAGA+AGG | 0.484372 | 2:-34429127 | None:intergenic |
TCTAGAACAGTAAACTTCTC+TGG | 0.487430 | 2:-34426361 | None:intergenic |
TGTGGCGAAGAAGGCCTTGA+AGG | 0.491077 | 2:-34429118 | None:intergenic |
CTGCAAAGAATTCTATCTGC+AGG | 0.491501 | 2:+34429185 | MsG0280008590.01.T01:CDS |
GAAGGAACAGGTGAAAGAAC+GGG | 0.502028 | 2:-34429100 | None:intergenic |
AATACTCCCATTATAGAAGA+TGG | 0.513403 | 2:-34428859 | None:intergenic |
TTTATGTGTTCTTTCGGTAA+GGG | 0.515174 | 2:+34429646 | MsG0280008590.01.T01:three_prime_UTR |
TTCTTCAGAAGCGTCGAGAC+AGG | 0.516859 | 2:+34429371 | MsG0280008590.01.T01:CDS |
GATAGAATTCTTTGCAGGAA+AGG | 0.520134 | 2:-34429179 | None:intergenic |
GAAGAAGGCCTTGAAGGAAC+AGG | 0.524051 | 2:-34429112 | None:intergenic |
GCTCAAGATGCAGATATAGT+TGG | 0.526009 | 2:-34429600 | None:intergenic |
TCAAGGCCTTCTTCGCCACA+TGG | 0.540794 | 2:+34429121 | MsG0280008590.01.T01:CDS |
AATTCTATCTGCAGGCTGCA+AGG | 0.555717 | 2:+34429193 | MsG0280008590.01.T01:CDS |
TGATAATATCGCTTCACCAC+AGG | 0.571663 | 2:+34429150 | MsG0280008590.01.T01:CDS |
TGAAGGAACAGGTGAAAGAA+CGG | 0.572032 | 2:-34429101 | None:intergenic |
AACAGGTGAAAGAACGGGAA+CGG | 0.573715 | 2:-34429095 | None:intergenic |
CATTGACCCCTCAACCATGT+TGG | 0.577350 | 2:-34426413 | None:intergenic |
GTTGGCTGAAATTCCTCCCG+TGG | 0.585328 | 2:-34429582 | None:intergenic |
AACAAAGGTAGCTGACAACA+TGG | 0.591184 | 2:+34429509 | MsG0280008590.01.T01:CDS |
GGTTTCAATGAAGGAACCAC+GGG | 0.597401 | 2:+34429566 | MsG0280008590.01.T01:CDS |
TTCAATGAAGGAACCACGGG+AGG | 0.608188 | 2:+34429569 | MsG0280008590.01.T01:CDS |
GACAACATGGAGAACAACTT+CGG | 0.616517 | 2:+34429522 | MsG0280008590.01.T01:CDS |
CGGTTTCAATGAAGGAACCA+CGG | 0.627139 | 2:+34429565 | MsG0280008590.01.T01:CDS |
GCAGGAAAGGGATGTGCCTG+TGG | 0.648722 | 2:-34429166 | None:intergenic |
TGATGGTGCTAGTTCCAACA+TGG | 0.653805 | 2:+34426399 | MsG0280008590.01.T01:CDS |
CTAGTTCCAACATGGTTGAG+GGG | 0.662811 | 2:+34426407 | MsG0280008590.01.T01:CDS |
ATATTATCAGCAGTTCCATG+TGG | 0.739266 | 2:-34429136 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAACTTTGTAAAATTTT+TGG | + | Chr2:34426242-34426261 | MsG0280008590.01.T01:five_prime_UTR | 10.0% |
!!! | ATTTTAATTCAAAAAACTAA+AGG | - | Chr2:34426734-34426753 | None:intergenic | 10.0% |
!! | ATCTTAGTTATTTAAAAAGT+TGG | - | Chr2:34428040-34428059 | None:intergenic | 15.0% |
!! | ATAATTTATGTTTGTACTAC+AGG | + | Chr2:34429451-34429470 | MsG0280008590.01.T01:intron | 20.0% |
!! | ATACAAATTGATACCATTTA+AGG | - | Chr2:34426688-34426707 | None:intergenic | 20.0% |
!! | ATACACTGATACATATATTT+AGG | + | Chr2:34428544-34428563 | MsG0280008590.01.T01:intron | 20.0% |
!! | ATCAAACAGAAACAAAAAAA+GGG | - | Chr2:34426556-34426575 | None:intergenic | 20.0% |
!! | GAAAGAAGAGAATTATTTAA+GGG | - | Chr2:34426279-34426298 | None:intergenic | 20.0% |
!! | TAGTTGAAGACATAATTAAT+AGG | - | Chr2:34429229-34429248 | None:intergenic | 20.0% |
!! | TGAAAGAAGAGAATTATTTA+AGG | - | Chr2:34426280-34426299 | None:intergenic | 20.0% |
!! | TTATCATTTATGTGTTCTTT+CGG | + | Chr2:34429640-34429659 | MsG0280008590.01.T01:three_prime_UTR | 20.0% |
!! | TTGTTAAGGAATAGAATAAA+GGG | + | Chr2:34427359-34427378 | MsG0280008590.01.T01:intron | 20.0% |
!!! | AAACGAAATTTTCGATTAAA+TGG | + | Chr2:34426826-34426845 | MsG0280008590.01.T01:intron | 20.0% |
!!! | ACTAGTTGGTTATTTAATTT+TGG | + | Chr2:34426587-34426606 | MsG0280008590.01.T01:intron | 20.0% |
!!! | ACTGTATTATTTTCTCTTTT+AGG | + | Chr2:34428784-34428803 | MsG0280008590.01.T01:intron | 20.0% |
!!! | TAATCAAAAACATGCTTTTT+TGG | - | Chr2:34426478-34426497 | None:intergenic | 20.0% |
! | AAAATTGTTCTAATGTGTTG+AGG | + | Chr2:34426749-34426768 | MsG0280008590.01.T01:intron | 25.0% |
! | AAATATTACCATAGCAAATC+CGG | - | Chr2:34427200-34427219 | None:intergenic | 25.0% |
! | AAATTGTTCTAATGTGTTGA+GGG | + | Chr2:34426750-34426769 | MsG0280008590.01.T01:intron | 25.0% |
! | AAGAACTCAACGATTAATTA+TGG | - | Chr2:34427152-34427171 | None:intergenic | 25.0% |
! | AATGGAATAAGTCATTTGAA+TGG | - | Chr2:34428343-34428362 | None:intergenic | 25.0% |
! | ACTTAATTATACTGATCTGA+CGG | + | Chr2:34426783-34426802 | MsG0280008590.01.T01:intron | 25.0% |
! | AGTGTATATGCTACATTAAT+GGG | - | Chr2:34428531-34428550 | None:intergenic | 25.0% |
! | ATATGAAAATCGAAAAGAGT+AGG | - | Chr2:34427549-34427568 | None:intergenic | 25.0% |
! | ATCTACTTAAATATTACGTG+CGG | - | Chr2:34427022-34427041 | None:intergenic | 25.0% |
! | CATCAAACAGAAACAAAAAA+AGG | - | Chr2:34426557-34426576 | None:intergenic | 25.0% |
! | GTTGTTAAGGAATAGAATAA+AGG | + | Chr2:34427358-34427377 | MsG0280008590.01.T01:intron | 25.0% |
! | TGATTCATTGCATAATAGAA+CGG | + | Chr2:34427078-34427097 | MsG0280008590.01.T01:intron | 25.0% |
! | TTAGTAGTTAAGAGTTGTTA+AGG | + | Chr2:34427345-34427364 | MsG0280008590.01.T01:intron | 25.0% |
! | TTCTATTATGCAATGAATCA+GGG | - | Chr2:34427078-34427097 | None:intergenic | 25.0% |
!! | AACTATACTTGTTACTTCTT+TGG | + | Chr2:34427272-34427291 | MsG0280008590.01.T01:intron | 25.0% |
!! | ACCATTTAAGGTACAAAAAT+TGG | - | Chr2:34426676-34426695 | None:intergenic | 25.0% |
!! | CATACACAAAATTTGAAACA+TGG | - | Chr2:34429410-34429429 | None:intergenic | 25.0% |
!! | TAATTCTCTTCTTTCAGTTT+TGG | + | Chr2:34426284-34426303 | MsG0280008590.01.T01:five_prime_UTR | 25.0% |
!! | TCCAATTTTTGTACCTTAAA+TGG | + | Chr2:34426672-34426691 | MsG0280008590.01.T01:intron | 25.0% |
!!! | AGATATGTCATTGTTTTTCA+TGG | + | Chr2:34428195-34428214 | MsG0280008590.01.T01:intron | 25.0% |
!!! | AGTCTTCATTGATTTAGAAA+AGG | - | Chr2:34427627-34427646 | None:intergenic | 25.0% |
!!! | ATGAAAAAGTATTAAGTCCA+AGG | - | Chr2:34428013-34428032 | None:intergenic | 25.0% |
!!! | CAAAGTTTTTTGAGTTTCAA+TGG | - | Chr2:34426233-34426252 | None:intergenic | 25.0% |
!!! | TGCATATTTTTATTGAACCT+TGG | + | Chr2:34427670-34427689 | MsG0280008590.01.T01:intron | 25.0% |
!!! | TGGTTCATCTAATGTTTTTA+TGG | - | Chr2:34426635-34426654 | None:intergenic | 25.0% |
AAACAAAAAAAGGGTCTTGA+AGG | - | Chr2:34426547-34426566 | None:intergenic | 30.0% | |
AACTCTCTCTATATACTAAC+AGG | + | Chr2:34429000-34429019 | MsG0280008590.01.T01:intron | 30.0% | |
AATACTCCCATTATAGAAGA+TGG | - | Chr2:34428862-34428881 | None:intergenic | 30.0% | |
AATTGTTGAGGAGAAAAGTA+GGG | - | Chr2:34426927-34426946 | None:intergenic | 30.0% | |
ACGAGACATATAAATTATGG+TGG | - | Chr2:34429288-34429307 | None:intergenic | 30.0% | |
ACGTGAATTTCATCAACTTA+TGG | - | Chr2:34428278-34428297 | None:intergenic | 30.0% | |
AGAGTAGTTAGTTAGCTATT+TGG | + | Chr2:34427414-34427433 | MsG0280008590.01.T01:intron | 30.0% | |
AGCTTACCATCTTCTATAAT+GGG | + | Chr2:34428853-34428872 | MsG0280008590.01.T01:CDS | 30.0% | |
AGTAGATCAAAGAAAACTGT+AGG | - | Chr2:34426857-34426876 | None:intergenic | 30.0% | |
AGTTAGTTAGCTATTTGGTT+AGG | + | Chr2:34427419-34427438 | MsG0280008590.01.T01:intron | 30.0% | |
ATAGAATTCTTTGCAGGAAA+GGG | - | Chr2:34429181-34429200 | None:intergenic | 30.0% | |
ATTATCGAACATCAACTCAT+TGG | - | Chr2:34429882-34429901 | None:intergenic | 30.0% | |
ATTTATGTGTTCTTTCGGTA+AGG | + | Chr2:34429645-34429664 | MsG0280008590.01.T01:three_prime_UTR | 30.0% | |
CACACGAGACATATAAATTA+TGG | - | Chr2:34429291-34429310 | None:intergenic | 30.0% | |
CAGTGTATATGCTACATTAA+TGG | - | Chr2:34428532-34428551 | None:intergenic | 30.0% | |
CATAATTTATATGTCTCGTG+TGG | + | Chr2:34429289-34429308 | MsG0280008590.01.T01:intron | 30.0% | |
GATGAATATTACTCACTAGT+TGG | + | Chr2:34426573-34426592 | MsG0280008590.01.T01:intron | 30.0% | |
GTGTATAACCAAATTGAACA+GGG | + | Chr2:34428296-34428315 | MsG0280008590.01.T01:intron | 30.0% | |
GTGTATATGCTACATTAATG+GGG | - | Chr2:34428530-34428549 | None:intergenic | 30.0% | |
GTTCTATTATGCAATGAATC+AGG | - | Chr2:34427079-34427098 | None:intergenic | 30.0% | |
TAATTTCGCTTATGACAGAA+AGG | - | Chr2:34427716-34427735 | None:intergenic | 30.0% | |
TCTCGCTGAAAAATATGTAA+TGG | - | Chr2:34428361-34428380 | None:intergenic | 30.0% | |
TCTGTTCTGTATGAAATCAT+TGG | + | Chr2:34428157-34428176 | MsG0280008590.01.T01:intron | 30.0% | |
TGAGTTGTATTAGCAATCAT+TGG | - | Chr2:34428834-34428853 | None:intergenic | 30.0% | |
TGGATTGCTAACATTATCAT+AGG | + | Chr2:34427601-34427620 | MsG0280008590.01.T01:intron | 30.0% | |
TGGTCTATGTCAGATATAAT+AGG | - | Chr2:34427853-34427872 | None:intergenic | 30.0% | |
TTATCTTCTTAGTTGAGAAC+CGG | + | Chr2:34427178-34427197 | MsG0280008590.01.T01:intron | 30.0% | |
TTATGTTTGTACTACAGGTT+GGG | + | Chr2:34429456-34429475 | MsG0280008590.01.T01:intron | 30.0% | |
TTCAAAGAACTTAGTCATCA+AGG | + | Chr2:34428659-34428678 | MsG0280008590.01.T01:intron | 30.0% | |
TTGTAGGGTTCTTCAAAAAA+TGG | + | Chr2:34426315-34426334 | MsG0280008590.01.T01:exon | 30.0% | |
TTTATGTGTTCTTTCGGTAA+GGG | + | Chr2:34429646-34429665 | MsG0280008590.01.T01:three_prime_UTR | 30.0% | |
TTTATGTTTGTACTACAGGT+TGG | + | Chr2:34429455-34429474 | MsG0280008590.01.T01:intron | 30.0% | |
! | ATAGATAACAGGGGATATTT+TGG | + | Chr2:34427928-34427947 | MsG0280008590.01.T01:intron | 30.0% |
! | CTTCTTTTCAATTCAACTCT+TGG | + | Chr2:34427581-34427600 | MsG0280008590.01.T01:intron | 30.0% |
! | GCTTTTTGTGTTTGTTTGAA+TGG | + | Chr2:34428691-34428710 | MsG0280008590.01.T01:intron | 30.0% |
! | GTTGCAGATTTTTATTGAAC+TGG | - | Chr2:34428505-34428524 | None:intergenic | 30.0% |
! | TATACTTGTTACTTCTTTGG+TGG | + | Chr2:34427275-34427294 | MsG0280008590.01.T01:intron | 30.0% |
! | TGATTGAACAACAAAAGCAT+AGG | + | Chr2:34428094-34428113 | MsG0280008590.01.T01:intron | 30.0% |
! | TTTTTCTGAATTCTGAACCT+TGG | + | Chr2:34427993-34428012 | MsG0280008590.01.T01:intron | 30.0% |
!! | AGTTTTGGTGATCTATTTGT+AGG | + | Chr2:34426299-34426318 | MsG0280008590.01.T01:five_prime_UTR | 30.0% |
!! | CTTTGATCTACTTTTCTTAC+TGG | + | Chr2:34426865-34426884 | MsG0280008590.01.T01:intron | 30.0% |
!! | GTTTTGGTGATCTATTTGTA+GGG | + | Chr2:34426300-34426319 | MsG0280008590.01.T01:five_prime_UTR | 30.0% |
!! | TATTTTTCAGCGAGATTTTG+AGG | + | Chr2:34428366-34428385 | MsG0280008590.01.T01:intron | 30.0% |
!!! | TTTTGGTTTTTTGGCTTTTC+TGG | + | Chr2:34427945-34427964 | MsG0280008590.01.T01:intron | 30.0% |
AGGCTTCTTCATGCATATTA+TGG | + | Chr2:34428386-34428405 | MsG0280008590.01.T01:intron | 35.0% | |
AGGGTTCTTCAAAAAATGGA+TGG | + | Chr2:34426319-34426338 | MsG0280008590.01.T01:exon | 35.0% | |
AGTAGTGACTCTATTGTGAA+AGG | + | Chr2:34427501-34427520 | MsG0280008590.01.T01:intron | 35.0% | |
ATATTATCAGCAGTTCCATG+TGG | - | Chr2:34429139-34429158 | None:intergenic | 35.0% | |
ATTTCGATTGTGACGTAACA+TGG | - | Chr2:34428973-34428992 | None:intergenic | 35.0% | |
CAATTGTTGAGGAGAAAAGT+AGG | - | Chr2:34426928-34426947 | None:intergenic | 35.0% | |
CAGCTTACCATCTTCTATAA+TGG | + | Chr2:34428852-34428871 | MsG0280008590.01.T01:CDS | 35.0% | |
CATTAGATGAACCATGACTA+AGG | + | Chr2:34426641-34426660 | MsG0280008590.01.T01:intron | 35.0% | |
CGTGTATAACCAAATTGAAC+AGG | + | Chr2:34428295-34428314 | MsG0280008590.01.T01:intron | 35.0% | |
GAAACAAACACCAATTGTTG+AGG | - | Chr2:34426939-34426958 | None:intergenic | 35.0% | |
GATAGAATTCTTTGCAGGAA+AGG | - | Chr2:34429182-34429201 | None:intergenic | 35.0% | |
GCTCATAGTCATTGATAAGT+GGG | + | Chr2:34426994-34427013 | MsG0280008590.01.T01:intron | 35.0% | |
GTAGTGACTCTATTGTGAAA+GGG | + | Chr2:34427502-34427521 | MsG0280008590.01.T01:intron | 35.0% | |
TAGTTGAGATCAGAATTCTG+AGG | - | Chr2:34427257-34427276 | None:intergenic | 35.0% | |
TGAAACACTGGAAATCTCAA+TGG | - | Chr2:34428123-34428142 | None:intergenic | 35.0% | |
TTGAGCAGAATTCTAGTGTT+TGG | + | Chr2:34429617-34429636 | MsG0280008590.01.T01:exon | 35.0% | |
TTGGTTAGGTAGAGAATACA+AGG | + | Chr2:34427433-34427452 | MsG0280008590.01.T01:intron | 35.0% | |
! | ACTTTTGTCCCTGTTCAATT+TGG | - | Chr2:34428307-34428326 | None:intergenic | 35.0% |
! | CACAAAATTTGAAACATGGC+AGG | - | Chr2:34429406-34429425 | None:intergenic | 35.0% |
! | CTTCTTTGTTTCACTAGACT+TGG | - | Chr2:34429059-34429078 | None:intergenic | 35.0% |
! | GAATCTTCTATTGCTGTTGA+TGG | + | Chr2:34426382-34426401 | MsG0280008590.01.T01:CDS | 35.0% |
! | GTCAGATATAATAGGTGTTG+TGG | - | Chr2:34427845-34427864 | None:intergenic | 35.0% |
! | TCTAGAACAGTAAACTTCTC+TGG | - | Chr2:34426364-34426383 | None:intergenic | 35.0% |
!! | AATGGATGGTGTTACTGTTA+AGG | + | Chr2:34426333-34426352 | MsG0280008590.01.T01:exon | 35.0% |
!! | CTACTTTTCTCCTCAACAAT+TGG | + | Chr2:34426926-34426945 | MsG0280008590.01.T01:intron | 35.0% |
!! | GGGAGTATTTGTATCTATGA+TGG | + | Chr2:34428873-34428892 | MsG0280008590.01.T01:CDS | 35.0% |
!! | TTCCACGTTTGTGTTTTGAA+GGG | + | Chr2:34428479-34428498 | MsG0280008590.01.T01:intron | 35.0% |
!! | TTTCCACGTTTGTGTTTTGA+AGG | + | Chr2:34428478-34428497 | MsG0280008590.01.T01:intron | 35.0% |
!!! | CAGGGGATATTTTGGTTTTT+TGG | + | Chr2:34427936-34427955 | MsG0280008590.01.T01:intron | 35.0% |
!!! | TTGTCAGCTACCTTTGTTTT+TGG | - | Chr2:34429507-34429526 | None:intergenic | 35.0% |
AACAAAGGTAGCTGACAACA+TGG | + | Chr2:34429509-34429528 | MsG0280008590.01.T01:CDS | 40.0% | |
ACCTTGGTATGTATCCTTCA+CGG | + | Chr2:34427686-34427705 | MsG0280008590.01.T01:intron | 40.0% | |
ACTTCAAAGTTGCATCTCTC+TGG | + | Chr2:34429769-34429788 | MsG0280008590.01.T01:three_prime_UTR | 40.0% | |
AGACCACATCACCATGTTTA+TGG | + | Chr2:34427867-34427886 | MsG0280008590.01.T01:intron | 40.0% | |
AGCCTAGAAAACTCAGTACA+AGG | - | Chr2:34428597-34428616 | None:intergenic | 40.0% | |
AGTAGGAGTCTTCTTCTTCA+AGG | - | Chr2:34427532-34427551 | None:intergenic | 40.0% | |
ATGCTACACAACCGTGATTA+AGG | - | Chr2:34428441-34428460 | None:intergenic | 40.0% | |
CATCTGATTGTACCGTAGAA+AGG | - | Chr2:34427303-34427322 | None:intergenic | 40.0% | |
CATCTGCAGATAGATAACAG+GGG | + | Chr2:34427919-34427938 | MsG0280008590.01.T01:intron | 40.0% | |
CCAACAATCCACCATAAACA+TGG | - | Chr2:34427881-34427900 | None:intergenic | 40.0% | |
CCATCTGCAGATAGATAACA+GGG | + | Chr2:34427918-34427937 | MsG0280008590.01.T01:intron | 40.0% | |
CTGCAAAGAATTCTATCTGC+AGG | + | Chr2:34429185-34429204 | MsG0280008590.01.T01:CDS | 40.0% | |
CTGCAGATAGAATTCTTTGC+AGG | - | Chr2:34429187-34429206 | None:intergenic | 40.0% | |
GACAACATGGAGAACAACTT+CGG | + | Chr2:34429522-34429541 | MsG0280008590.01.T01:CDS | 40.0% | |
GCAGTCAAAAACTGTTGATG+CGG | + | Chr2:34428415-34428434 | MsG0280008590.01.T01:intron | 40.0% | |
GCTCAAGATGCAGATATAGT+TGG | - | Chr2:34429603-34429622 | None:intergenic | 40.0% | |
GGAAAAGAACACCTTAGTCA+TGG | - | Chr2:34426655-34426674 | None:intergenic | 40.0% | |
GGCTCATAGTCATTGATAAG+TGG | + | Chr2:34426993-34427012 | MsG0280008590.01.T01:intron | 40.0% | |
GTACATCTCTAACAGTTGAG+TGG | - | Chr2:34427112-34427131 | None:intergenic | 40.0% | |
GTAGGAGTCTTCTTCTTCAA+GGG | - | Chr2:34427531-34427550 | None:intergenic | 40.0% | |
TATCTGCAGATGGCAGATTA+TGG | - | Chr2:34427911-34427930 | None:intergenic | 40.0% | |
TCATACAGAACAGAACAGAG+AGG | - | Chr2:34428151-34428170 | None:intergenic | 40.0% | |
TCCTTCATTGAAACCGAATC+TGG | - | Chr2:34429561-34429580 | None:intergenic | 40.0% | |
TCTTTGGTGGAACCTTTCTA+CGG | + | Chr2:34427288-34427307 | MsG0280008590.01.T01:intron | 40.0% | |
TGAAGGAACAGGTGAAAGAA+CGG | - | Chr2:34429104-34429123 | None:intergenic | 40.0% | |
TGATAATATCGCTTCACCAC+AGG | + | Chr2:34429150-34429169 | MsG0280008590.01.T01:CDS | 40.0% | |
TGATGGAATTCCTGCAGAAA+AGG | + | Chr2:34428890-34428909 | MsG0280008590.01.T01:CDS | 40.0% | |
TTCTTTCACCTGTTCCTTCA+AGG | + | Chr2:34429104-34429123 | MsG0280008590.01.T01:CDS | 40.0% | |
TTTCGTGTTTGTGTTGAGCA+TGG | + | Chr2:34426972-34426991 | MsG0280008590.01.T01:intron | 40.0% | |
! | ATAATAGGTGTTGTGGCCTA+CGG | - | Chr2:34427838-34427857 | None:intergenic | 40.0% |
! | CTCCTTGTACTGAGTTTTCT+AGG | + | Chr2:34428592-34428611 | MsG0280008590.01.T01:intron | 40.0% |
!! | CCATGTTTATGGTGGATTGT+TGG | + | Chr2:34427878-34427897 | MsG0280008590.01.T01:intron | 40.0% |
AACAGGTGAAAGAACGGGAA+CGG | - | Chr2:34429098-34429117 | None:intergenic | 45.0% | |
AATTCTATCTGCAGGCTGCA+AGG | + | Chr2:34429193-34429212 | MsG0280008590.01.T01:CDS | 45.0% | |
ACCGTGAAGGATACATACCA+AGG | - | Chr2:34427690-34427709 | None:intergenic | 45.0% | |
AGTGAATGTCTGCGTGCTAT+TGG | - | Chr2:34429343-34429362 | None:intergenic | 45.0% | |
ATTGGATTCGTTCCAGATGC+TGG | - | Chr2:34428816-34428835 | None:intergenic | 45.0% | |
CCACATCACCATGTTTATGG+TGG | + | Chr2:34427870-34427889 | MsG0280008590.01.T01:intron | 45.0% | |
CCCTGTTATCTATCTGCAGA+TGG | - | Chr2:34427921-34427940 | None:intergenic | 45.0% | |
CGGTTTCAATGAAGGAACCA+CGG | + | Chr2:34429565-34429584 | MsG0280008590.01.T01:CDS | 45.0% | |
CTAGTTCCAACATGGTTGAG+GGG | + | Chr2:34426407-34426426 | MsG0280008590.01.T01:CDS | 45.0% | |
GAAGGAACAGGTGAAAGAAC+GGG | - | Chr2:34429103-34429122 | None:intergenic | 45.0% | |
GCCATCTGCAGATAGATAAC+AGG | + | Chr2:34427917-34427936 | MsG0280008590.01.T01:intron | 45.0% | |
GCTAGTTCCAACATGGTTGA+GGG | + | Chr2:34426406-34426425 | MsG0280008590.01.T01:CDS | 45.0% | |
GGTTTCAATGAAGGAACCAC+GGG | + | Chr2:34429566-34429585 | MsG0280008590.01.T01:CDS | 45.0% | |
GTTAGAGATGTACGCGCAAT+TGG | + | Chr2:34427119-34427138 | MsG0280008590.01.T01:intron | 45.0% | |
TCCTTCCTCGCCAAAAACAA+AGG | + | Chr2:34429494-34429513 | MsG0280008590.01.T01:CDS | 45.0% | |
TGCTAGTTCCAACATGGTTG+AGG | + | Chr2:34426405-34426424 | MsG0280008590.01.T01:CDS | 45.0% | |
TGCTGACAATTCGCCAGATT+CGG | + | Chr2:34429545-34429564 | MsG0280008590.01.T01:CDS | 45.0% | |
TGTTGATGCGGCCTTAATCA+CGG | + | Chr2:34428427-34428446 | MsG0280008590.01.T01:intron | 45.0% | |
TTTAGGTCAATGCCAGCATC+TGG | + | Chr2:34428801-34428820 | MsG0280008590.01.T01:intron | 45.0% | |
! | AGAGAGGTATGCTGAAACAC+TGG | - | Chr2:34428135-34428154 | None:intergenic | 45.0% |
! | CCACCATAAACATGGTGATG+TGG | - | Chr2:34427873-34427892 | None:intergenic | 45.0% |
! | GCCAGATTCGGTTTCAATGA+AGG | + | Chr2:34429557-34429576 | MsG0280008590.01.T01:CDS | 45.0% |
! | TGATGGTGCTAGTTCCAACA+TGG | + | Chr2:34426399-34426418 | MsG0280008590.01.T01:CDS | 45.0% |
!! | GTTGAGAACCGGATTTGCTA+TGG | + | Chr2:34427189-34427208 | MsG0280008590.01.T01:intron | 45.0% |
!!! | ACCTTTGTTTTTGGCGAGGA+AGG | - | Chr2:34429498-34429517 | None:intergenic | 45.0% |
!!! | AGCTACCTTTGTTTTTGGCG+AGG | - | Chr2:34429502-34429521 | None:intergenic | 45.0% |
!!! | GTTTTTGGCGAGGAAGGATA+GGG | - | Chr2:34429492-34429511 | None:intergenic | 45.0% |
!!! | TGTTTTTGGCGAGGAAGGAT+AGG | - | Chr2:34429493-34429512 | None:intergenic | 45.0% |
ACAGGTGAAAGAACGGGAAC+GGG | - | Chr2:34429097-34429116 | None:intergenic | 50.0% | |
CATTGACCCCTCAACCATGT+TGG | - | Chr2:34426416-34426435 | None:intergenic | 50.0% | |
CTGCAGATGGCAGATTATGG+TGG | - | Chr2:34427908-34427927 | None:intergenic | 50.0% | |
GAAGAAGGCCTTGAAGGAAC+AGG | - | Chr2:34429115-34429134 | None:intergenic | 50.0% | |
GACAGAAAGGTCAACCGTGA+AGG | - | Chr2:34427703-34427722 | None:intergenic | 50.0% | |
GGCCCTTCAAAACACAAACG+TGG | - | Chr2:34428484-34428503 | None:intergenic | 50.0% | |
TTCAATGAAGGAACCACGGG+AGG | + | Chr2:34429569-34429588 | MsG0280008590.01.T01:CDS | 50.0% | |
!! | TTCTTCAGAAGCGTCGAGAC+AGG | + | Chr2:34429371-34429390 | MsG0280008590.01.T01:CDS | 50.0% |
CAGTGTAGCGTAGCTGCGTA+GGG | - | Chr2:34428919-34428938 | None:intergenic | 55.0% | |
GCAGTTCCATGTGGCGAAGA+AGG | - | Chr2:34429130-34429149 | None:intergenic | 55.0% | |
GTTGGCTGAAATTCCTCCCG+TGG | - | Chr2:34429585-34429604 | None:intergenic | 55.0% | |
TCAAGGCCTTCTTCGCCACA+TGG | + | Chr2:34429121-34429140 | MsG0280008590.01.T01:CDS | 55.0% | |
TCAGTGTAGCGTAGCTGCGT+AGG | - | Chr2:34428920-34428939 | None:intergenic | 55.0% | |
TGTGGCGAAGAAGGCCTTGA+AGG | - | Chr2:34429121-34429140 | None:intergenic | 55.0% | |
! | CGTAGGGCTACCTTTTCTGC+AGG | - | Chr2:34428903-34428922 | None:intergenic | 55.0% |
GCAGGAAAGGGATGTGCCTG+TGG | - | Chr2:34429169-34429188 | None:intergenic | 60.0% | |
TAGCTGCCACGGCACATTGG+TGG | - | Chr2:34427815-34427834 | None:intergenic | 60.0% | |
TGAGCACCACCAATGTGCCG+TGG | + | Chr2:34427806-34427825 | MsG0280008590.01.T01:intron | 60.0% | |
CGGTAGCTGCCACGGCACAT+TGG | - | Chr2:34427818-34427837 | None:intergenic | 65.0% | |
GTGGCCTACGGTAGCTGCCA+CGG | - | Chr2:34427826-34427845 | None:intergenic | 65.0% | |
TGTGCCGTGGCAGCTACCGT+AGG | + | Chr2:34427819-34427838 | MsG0280008590.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 34426217 | 34429911 | 34426217 | ID=MsG0280008590.01;Name=MsG0280008590.01 |
Chr2 | mRNA | 34426217 | 34429911 | 34426217 | ID=MsG0280008590.01.T01;Parent=MsG0280008590.01;Name=MsG0280008590.01.T01;_AED=0.36;_eAED=0.36;_QI=117|1|1|1|1|1|5|291|208 |
Chr2 | exon | 34426217 | 34426455 | 34426217 | ID=MsG0280008590.01.T01:exon:20365;Parent=MsG0280008590.01.T01 |
Chr2 | exon | 34428806 | 34428911 | 34428806 | ID=MsG0280008590.01.T01:exon:20366;Parent=MsG0280008590.01.T01 |
Chr2 | exon | 34429022 | 34429214 | 34429022 | ID=MsG0280008590.01.T01:exon:20367;Parent=MsG0280008590.01.T01 |
Chr2 | exon | 34429335 | 34429392 | 34429335 | ID=MsG0280008590.01.T01:exon:20368;Parent=MsG0280008590.01.T01 |
Chr2 | exon | 34429473 | 34429911 | 34429473 | ID=MsG0280008590.01.T01:exon:20369;Parent=MsG0280008590.01.T01 |
Chr2 | five_prime_UTR | 34426217 | 34426333 | 34426217 | ID=MsG0280008590.01.T01:five_prime_utr;Parent=MsG0280008590.01.T01 |
Chr2 | CDS | 34426334 | 34426455 | 34426334 | ID=MsG0280008590.01.T01:cds;Parent=MsG0280008590.01.T01 |
Chr2 | CDS | 34428806 | 34428911 | 34428806 | ID=MsG0280008590.01.T01:cds;Parent=MsG0280008590.01.T01 |
Chr2 | CDS | 34429022 | 34429214 | 34429022 | ID=MsG0280008590.01.T01:cds;Parent=MsG0280008590.01.T01 |
Chr2 | CDS | 34429335 | 34429392 | 34429335 | ID=MsG0280008590.01.T01:cds;Parent=MsG0280008590.01.T01 |
Chr2 | CDS | 34429473 | 34429620 | 34429473 | ID=MsG0280008590.01.T01:cds;Parent=MsG0280008590.01.T01 |
Chr2 | three_prime_UTR | 34429621 | 34429911 | 34429621 | ID=MsG0280008590.01.T01:three_prime_utr;Parent=MsG0280008590.01.T01 |
Gene Sequence |
Protein sequence |