AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0009820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009820 MtrunA17_Chr8g0340741 86.486 37 5 0 77 113 448 484 1.75e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 74 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCCAACCTTTATCGTAAT+TGG 0.190441 1_1:+14664390 Msa0009820:CDS
TCTCATTCTTATTACCTTGA+TGG 0.273691 1_1:+14664304 Msa0009820:CDS
ACTTTCTGAGAATTGTTATA+GGG 0.300909 1_1:+14660742 Msa0009820:five_prime_UTR
TCATTGCATGTTGCTTCAAT+TGG 0.303065 1_1:-14660116 None:intergenic
AAGCAGCAAAAGAGCTTAAC+TGG 0.304895 1_1:+14661331 Msa0009820:CDS
CACTTTCTGAGAATTGTTAT+AGG 0.327100 1_1:+14660741 Msa0009820:five_prime_UTR
CATTGCATGTTGCTTCAATT+GGG 0.333919 1_1:-14660115 None:intergenic
GGAATTCGCTTCCGCCGTTC+CGG 0.357453 1_1:+14660565 Msa0009820:five_prime_UTR
CTCCGATCAGCCTTTACAAT+TGG 0.367849 1_1:-14661270 None:intergenic
TTACCTTCTGATTGTAAATC+CGG 0.385309 1_1:-14660584 None:intergenic
GGGAACAGGAGAGGAAGAAG+GGG 0.395804 1_1:+14659876 Msa0009820:five_prime_UTR
TCAAATGATGGTTCAGGAAC+TGG 0.397688 1_1:+14664254 Msa0009820:CDS
GTTGTTTACATAGGTTGGTC+AGG 0.410633 1_1:+14663649 Msa0009820:intron
TGAGAGTGAGGGAGAGAAGT+AGG 0.416451 1_1:-14660047 None:intergenic
AGAAGGGGAACGAGAGAAAC+GGG 0.425800 1_1:+14659856 Msa0009820:five_prime_UTR
GGAACAGGAGAGGAAGAAGG+GGG 0.438627 1_1:+14659877 Msa0009820:five_prime_UTR
CGGGAACAGGAGAGGAAGAA+GGG 0.440770 1_1:+14659875 Msa0009820:five_prime_UTR
TGACTGAGGAAATAATTAAT+CGG 0.442440 1_1:+14664441 Msa0009820:CDS
TAGGTTTGTTGAGTTAATTA+AGG 0.445154 1_1:+14662462 Msa0009820:CDS
GAGCACTCAAATGATGGTTC+AGG 0.447112 1_1:+14664248 Msa0009820:CDS
ACGGGAACAGGAGAGGAAGA+AGG 0.451499 1_1:+14659874 Msa0009820:five_prime_UTR
TTAGAAAATTCCAATTGTAA+AGG 0.455191 1_1:+14661260 Msa0009820:intron
AGAAGGAAAGGCTGAGAGTG+AGG 0.457126 1_1:-14660059 None:intergenic
CAGAAAGAACGGCAGAGGAG+AGG 0.457306 1_1:+14659904 Msa0009820:five_prime_UTR
AGCTGCGCCAATTACGATAA+AGG 0.462212 1_1:-14664397 None:intergenic
ATCGTTGAGCACTCAAATGA+TGG 0.463132 1_1:+14664242 Msa0009820:CDS
AAGAAGGGGAACGAGAGAAA+CGG 0.467039 1_1:+14659855 Msa0009820:five_prime_UTR
CAAATCTGCAGAATTGTAGA+TGG 0.467950 1_1:+14660528 Msa0009820:five_prime_UTR
GAACAGGAGAGGAAGAAGGG+GGG 0.469668 1_1:+14659878 Msa0009820:five_prime_UTR
GGAACGAGAGAAACGGGAAC+AGG 0.471493 1_1:+14659862 Msa0009820:five_prime_UTR
AGTGATTAGAAGCATAATCA+AGG 0.477232 1_1:+14660157 Msa0009820:five_prime_UTR
AGAAAGAACGGCAGAGGAGA+GGG 0.477733 1_1:+14659905 Msa0009820:five_prime_UTR
ATTAATTATTTCCTCAGTCA+TGG 0.483885 1_1:-14664438 None:intergenic
GTAGATGGCCTTGCTGTTTG+AGG 0.485273 1_1:+14660543 Msa0009820:five_prime_UTR
GGCGACAGAAAGAACGGCAG+AGG 0.485795 1_1:+14659899 Msa0009820:five_prime_UTR
GCTCAACTCATTAGTAGTAA+TGG 0.498019 1_1:+14662439 Msa0009820:CDS
TAGATGGCCTTGCTGTTTGA+GGG 0.504380 1_1:+14660544 Msa0009820:five_prime_UTR
ATGATAATTGCTAACCATCA+AGG 0.517087 1_1:-14664318 None:intergenic
TCCAACACTCCGATCTGCAC+TGG 0.517110 1_1:+14659956 Msa0009820:five_prime_UTR
GGGGAGGTTGAAGAATTAAA+GGG 0.520644 1_1:-14660094 None:intergenic
TAGACTTTACATTTATCCCA+TGG 0.531503 1_1:-14664500 None:intergenic
GAAGGAAAGGCTGAGAGTGA+GGG 0.541277 1_1:-14660058 None:intergenic
ATTGCATGTTGCTTCAATTG+GGG 0.544114 1_1:-14660114 None:intergenic
GTGTTGGACGGCGAGGTCGA+CGG 0.546335 1_1:-14659941 None:intergenic
ACCAGTGCAGATCGGAGTGT+TGG 0.547707 1_1:-14659957 None:intergenic
TTGCATGTTGCTTCAATTGG+GGG 0.548668 1_1:-14660113 None:intergenic
TTCCAATTGTAAAGGCTGAT+CGG 0.556362 1_1:+14661268 Msa0009820:five_prime_UTR
AATACCCTAAAAGAGTTGCT+TGG 0.561965 1_1:+14664197 Msa0009820:CDS
AGCAGCTAGGCCTTCACAGA+TGG 0.562217 1_1:+14664165 Msa0009820:intron
TAAACAACTTCAGCATCTCT+AGG 0.562490 1_1:-14661294 None:intergenic
AAGGGTCTGATGTAGAAAGA+AGG 0.565269 1_1:-14660076 None:intergenic
CTTTCTGAGAATTGTTATAG+GGG 0.565811 1_1:+14660743 Msa0009820:five_prime_UTR
ATAGGTTGGTCAGGATGTTG+TGG 0.569173 1_1:+14663658 Msa0009820:intron
TCTAATCACTTAAAGCATGT+AGG 0.575251 1_1:-14660144 None:intergenic
GCGCCAATTACGATAAAGGT+TGG 0.582465 1_1:-14664393 None:intergenic
GAGTGAGGGAGAGAAGTAGG+AGG 0.589607 1_1:-14660044 None:intergenic
GAGAGAAACGGGAACAGGAG+AGG 0.594571 1_1:+14659867 Msa0009820:five_prime_UTR
AAATCAAAACCAGTGCAGAT+CGG 0.601823 1_1:-14659965 None:intergenic
GTTCCGGATTTACAATCAGA+AGG 0.606276 1_1:+14660581 Msa0009820:five_prime_UTR
GATCGGAGTGTTGGACGGCG+AGG 0.614383 1_1:-14659948 None:intergenic
TCTCTAAGCACCATCTGTGA+AGG 0.622635 1_1:-14664175 None:intergenic
AACTCATTAGTAGTAATGGT+AGG 0.633936 1_1:+14662443 Msa0009820:CDS
CATATGTTTCTGTAAGTGAG+AGG 0.636244 1_1:-14660018 None:intergenic
AGTGAGGGAGAGAAGTAGGA+GGG 0.638656 1_1:-14660043 None:intergenic
GTGCAGATCGGAGTGTTGGA+CGG 0.639439 1_1:-14659953 None:intergenic
TTCTGATTGTAAATCCGGAA+CGG 0.639789 1_1:-14660579 None:intergenic
GCGAATTCCCTCAAACAGCA+AGG 0.650955 1_1:-14660551 None:intergenic
TCTGATGTAGAAAGAAGGAA+AGG 0.652049 1_1:-14660071 None:intergenic
AGAAAAGCAATTGAGAAACA+AGG 0.655094 1_1:+14663689 Msa0009820:CDS
TGGTTCAGGAACTGGTGCAG+TGG 0.662719 1_1:+14664262 Msa0009820:CDS
CAAAAGAATGACCATGACTG+AGG 0.669987 1_1:+14664427 Msa0009820:CDS
ACTTTACATTTATCCCATGG+AGG 0.673211 1_1:-14664497 None:intergenic
TTGGACGGCGAGGTCGACGG+CGG 0.673722 1_1:-14659938 None:intergenic
TGATTGTAAATCCGGAACGG+CGG 0.718622 1_1:-14660576 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTCTAATTTAAAACAA+TGG + chr1_1:14662669-14662688 Msa0009820:intron 10.0%
!!! ATTTAGTTTAGAAAAAATTA+AGG - chr1_1:14662737-14662756 None:intergenic 10.0%
!! CTAATAATCAAAAAAATAAC+TGG - chr1_1:14660264-14660283 None:intergenic 15.0%
!!! TTTTATGATTAAACTGATTT+AGG + chr1_1:14660457-14660476 Msa0009820:intron 15.0%
!! TATATAAAAATCTTTCACTT+TGG + chr1_1:14660803-14660822 Msa0009820:intron 15.0%
!! AAAAAAAATCATCTATCTTA+GGG - chr1_1:14660829-14660848 None:intergenic 15.0%
!! TAAAAAAAATCATCTATCTT+AGG - chr1_1:14660830-14660849 None:intergenic 15.0%
!!! TAAGATAGATGATTTTTTTT+AGG + chr1_1:14660829-14660848 Msa0009820:intron 15.0%
!!! AAGATAGATGATTTTTTTTA+GGG + chr1_1:14660830-14660849 Msa0009820:intron 15.0%
!!! AACCCTTTTTTTTAATATTA+TGG + chr1_1:14661029-14661048 Msa0009820:intron 15.0%
!!! ACCCTTTTTTTTAATATTAT+GGG + chr1_1:14661030-14661049 Msa0009820:intron 15.0%
!!! CATATAATATTTGCAAATTT+TGG - chr1_1:14661469-14661488 None:intergenic 15.0%
!!! TTTTATACTCAATAAGTTTT+TGG + chr1_1:14662626-14662645 Msa0009820:intron 15.0%
!!! ATTTATATTCTGATTTTTCA+AGG + chr1_1:14663089-14663108 Msa0009820:intron 15.0%
!!! TTTATATTCTGATTTTTCAA+GGG + chr1_1:14663090-14663109 Msa0009820:intron 15.0%
!!! TTTATAGCAAGAATTTTTTT+TGG + chr1_1:14663419-14663438 Msa0009820:intron 15.0%
!!! TTATAGCAAGAATTTTTTTT+GGG + chr1_1:14663420-14663439 Msa0009820:intron 15.0%
!! AAACTAAGTATAAAATGTAA+AGG - chr1_1:14663625-14663644 None:intergenic 15.0%
!! TTTAGTCTAATTTATTAAAG+TGG + chr1_1:14663782-14663801 Msa0009820:intron 15.0%
!!! AGATTAAAGCTTTTATAAAA+CGG + chr1_1:14663863-14663882 Msa0009820:intron 15.0%
!!! AAAACTTTAAAAACTATACT+TGG - chr1_1:14664037-14664056 None:intergenic 15.0%
!!! TGGTTTTGATTTTATTGAAT+TGG + chr1_1:14659976-14659995 Msa0009820:five_prime_UTR 20.0%
!!! TTGTTATTATCTGAAGTTTT+TGG + chr1_1:14660362-14660381 Msa0009820:intron 20.0%
!!! TTTTTGATTTTGTTTGTTGT+TGG + chr1_1:14660417-14660436 Msa0009820:intron 20.0%
!!! GTTTTTTGATTTTTGAAAAC+TGG + chr1_1:14660653-14660672 Msa0009820:intron 20.0%
!! TTAAAGTAGTAACTTTATCT+TGG + chr1_1:14660892-14660911 Msa0009820:intron 20.0%
!! CCCCATAATATTAAAAAAAA+GGG - chr1_1:14661034-14661053 None:intergenic 20.0%
!!! CCCTTTTTTTTAATATTATG+GGG + chr1_1:14661031-14661050 Msa0009820:intron 20.0%
!! ACCCCATAATATTAAAAAAA+AGG - chr1_1:14661035-14661054 None:intergenic 20.0%
!! TTAGAAAATTCCAATTGTAA+AGG + chr1_1:14661260-14661279 Msa0009820:intron 20.0%
!!! TGGTTATTCAATTCTTTTTA+CGG + chr1_1:14661421-14661440 Msa0009820:intron 20.0%
!!! ATTTTGAGTCATTTTTAGAA+AGG + chr1_1:14661652-14661671 Msa0009820:intron 20.0%
!! GTCAAATAGTGTAATTATTA+TGG + chr1_1:14661692-14661711 Msa0009820:intron 20.0%
!!! GTATATGTAAATTTTAGCAA+TGG - chr1_1:14661962-14661981 None:intergenic 20.0%
!!! AAACTTCTATTGTTTTATGA+AGG + chr1_1:14662226-14662245 Msa0009820:intron 20.0%
!! ATAGTTGTATGTAGATAAAA+TGG + chr1_1:14662341-14662360 Msa0009820:intron 20.0%
!! AGAATTAGATATTTCACATT+TGG + chr1_1:14662860-14662879 Msa0009820:intron 20.0%
!! TCATAGCAATAAAAACAATT+CGG - chr1_1:14663064-14663083 None:intergenic 20.0%
!!! TGCTTATTTTCTTTCAATTT+TGG + chr1_1:14663139-14663158 Msa0009820:intron 20.0%
!! TTAATATATTGATGAAGATG+AGG + chr1_1:14663233-14663252 Msa0009820:intron 20.0%
!! ATGTTCTTATCACAATTAAT+TGG + chr1_1:14663305-14663324 Msa0009820:intron 20.0%
!!! TAAAAAATCGGTCAAATTTT+CGG - chr1_1:14663379-14663398 None:intergenic 20.0%
!! CAACCAAAATCATAAAAAAT+CGG - chr1_1:14663391-14663410 None:intergenic 20.0%
!!! TCAAATATTTTGATCTTTCA+TGG + chr1_1:14663510-14663529 Msa0009820:intron 20.0%
!!! AGTTTTATTGTTGTTTACAT+AGG + chr1_1:14663640-14663659 Msa0009820:intron 20.0%
!!! AGGTTAATTTTATCACTAAT+TGG + chr1_1:14663904-14663923 Msa0009820:intron 20.0%
!!! TTTTAAAGTTTTGAAATACG+AGG + chr1_1:14664045-14664064 Msa0009820:intron 20.0%
!!! AGTTTTTGGTTGAGAAATTT+TGG + chr1_1:14660376-14660395 Msa0009820:intron 25.0%
!! AATTTTCATGCAGGAAAATT+GGG + chr1_1:14660504-14660523 Msa0009820:intron 25.0%
!! ACTTTCTGAGAATTGTTATA+GGG + chr1_1:14660742-14660761 Msa0009820:five_prime_UTR 25.0%
! AATGGTTAAGGAATCAAAAA+AGG - chr1_1:14660986-14661005 None:intergenic 25.0%
!! TTACGGAAATTCAATGTTTT+TGG + chr1_1:14661438-14661457 Msa0009820:intron 25.0%
!! TGTTATATACATTTTGAGCA+CGG + chr1_1:14661589-14661608 Msa0009820:intron 25.0%
!! CTGTCTTTGAACAAAATTTT+TGG + chr1_1:14661616-14661635 Msa0009820:intron 25.0%
!!! TCAATTATTTTCAAGTAGTG+AGG + chr1_1:14661727-14661746 Msa0009820:intron 25.0%
!!! TATGTAAATTTTAGCAATGG+TGG - chr1_1:14661959-14661978 None:intergenic 25.0%
! TATAAGAAGATAACTGTTTG+AGG - chr1_1:14662091-14662110 None:intergenic 25.0%
!!! CAATCATTTTTGGAAAGAAT+TGG - chr1_1:14662131-14662150 None:intergenic 25.0%
! TCTTTCCAAAAATGATTGAT+TGG + chr1_1:14662133-14662152 Msa0009820:intron 25.0%
! CTTTCCAAAAATGATTGATT+GGG + chr1_1:14662134-14662153 Msa0009820:intron 25.0%
!! AATTCCCAATCAATCATTTT+TGG - chr1_1:14662141-14662160 None:intergenic 25.0%
!!! ATTGTTTTATGAAGGTAACT+TGG + chr1_1:14662234-14662253 Msa0009820:intron 25.0%
!!! TAGGTTTGTTGAGTTAATTA+AGG + chr1_1:14662462-14662481 Msa0009820:CDS 25.0%
! TAACAACAGGAAAAGAAAAA+GGG - chr1_1:14662585-14662604 None:intergenic 25.0%
! ATAACAACAGGAAAAGAAAA+AGG - chr1_1:14662586-14662605 None:intergenic 25.0%
! AGTTACACAATAATAACAAC+AGG - chr1_1:14662598-14662617 None:intergenic 25.0%
!!! TTTTTGGTTTAGCAATTTCT+TGG + chr1_1:14662642-14662661 Msa0009820:intron 25.0%
!!! AAAGTCTTATTGGATTACTT+TGG + chr1_1:14662786-14662805 Msa0009820:intron 25.0%
! ATATCTAATTCTATGCATGA+GGG - chr1_1:14662852-14662871 None:intergenic 25.0%
! AATATCTAATTCTATGCATG+AGG - chr1_1:14662853-14662872 None:intergenic 25.0%
! TACTTCATTACGAATAACTT+TGG + chr1_1:14662971-14662990 Msa0009820:intron 25.0%
! CATAGCAATAAAAACAATTC+GGG - chr1_1:14663063-14663082 None:intergenic 25.0%
! TATGACACATATAACCAATA+AGG + chr1_1:14663171-14663190 Msa0009820:intron 25.0%
! ATGACACATATAACCAATAA+GGG + chr1_1:14663172-14663191 Msa0009820:intron 25.0%
! GTATAGAAATCTCCTAAAAT+TGG + chr1_1:14663260-14663279 Msa0009820:intron 25.0%
!!! AAATGAGTTTTTTAGTCTAC+AGG + chr1_1:14663337-14663356 Msa0009820:intron 25.0%
!!! AATGAGTTTTTTAGTCTACA+GGG + chr1_1:14663338-14663357 Msa0009820:intron 25.0%
!!! TGACCGATTTTTTATGATTT+TGG + chr1_1:14663385-14663404 Msa0009820:intron 25.0%
!!! TTATTGTTGTTTACATAGGT+TGG + chr1_1:14663644-14663663 Msa0009820:intron 25.0%
! AGTCTAATTTATTAAAGTGG+TGG + chr1_1:14663785-14663804 Msa0009820:intron 25.0%
!! TAAAGCTTTTATAAAACGGT+TGG + chr1_1:14663867-14663886 Msa0009820:intron 25.0%
!! AAAGCTTTTATAAAACGGTT+GGG + chr1_1:14663868-14663887 Msa0009820:intron 25.0%
!! ATTTTATCACTAATTGGATC+TGG + chr1_1:14663910-14663929 Msa0009820:intron 25.0%
!! TAAAAAAAGATTTTGTGCCA+AGG - chr1_1:14663944-14663963 None:intergenic 25.0%
! ATTAATTATTTCCTCAGTCA+TGG - chr1_1:14664441-14664460 None:intergenic 25.0%
! TGACTGAGGAAATAATTAAT+CGG + chr1_1:14664441-14664460 Msa0009820:CDS 25.0%
!!! GGAAATAATTAATCGGTTTT+TGG + chr1_1:14664448-14664467 Msa0009820:CDS 25.0%
TCTAATCACTTAAAGCATGT+AGG - chr1_1:14660147-14660166 None:intergenic 30.0%
! AGTGATTAGAAGCATAATCA+AGG + chr1_1:14660157-14660176 Msa0009820:five_prime_UTR 30.0%
! TTAGAAGCATAATCAAGGTT+TGG + chr1_1:14660162-14660181 Msa0009820:intron 30.0%
!! TTTCCCCTTTTAATCGATTT+AGG + chr1_1:14660318-14660337 Msa0009820:intron 30.0%
!! TTCCCCTTTTAATCGATTTA+GGG + chr1_1:14660319-14660338 Msa0009820:intron 30.0%
AACCCTAAATCGATTAAAAG+GGG - chr1_1:14660324-14660343 None:intergenic 30.0%
GAACCCTAAATCGATTAAAA+GGG - chr1_1:14660325-14660344 None:intergenic 30.0%
!!! TGAGAAATTTTGGTTGATTC+TGG + chr1_1:14660386-14660405 Msa0009820:intron 30.0%
! TTAAACTGATTTAGGCTGAT+TGG + chr1_1:14660465-14660484 Msa0009820:intron 30.0%
! TAAACTGATTTAGGCTGATT+GGG + chr1_1:14660466-14660485 Msa0009820:intron 30.0%
! TTTTGGATGAATTTTCATGC+AGG + chr1_1:14660495-14660514 Msa0009820:intron 30.0%
! GAATTTTCATGCAGGAAAAT+TGG + chr1_1:14660503-14660522 Msa0009820:intron 30.0%
TTACCTTCTGATTGTAAATC+CGG - chr1_1:14660587-14660606 None:intergenic 30.0%
ATTGCGATGACATAAATTTG+GGG - chr1_1:14660622-14660641 None:intergenic 30.0%
GATTGCGATGACATAAATTT+GGG - chr1_1:14660623-14660642 None:intergenic 30.0%
! CACTTTCTGAGAATTGTTAT+AGG + chr1_1:14660741-14660760 Msa0009820:five_prime_UTR 30.0%
! CTTTCTGAGAATTGTTATAG+GGG + chr1_1:14660743-14660762 Msa0009820:five_prime_UTR 30.0%
ATCAAGCTATTGTTTAGTAC+AGG + chr1_1:14661207-14661226 Msa0009820:intron 30.0%
AAAGAATTGAATAACCAGAG+AGG - chr1_1:14661418-14661437 None:intergenic 30.0%
TCTTCATCTAATCAGAAATG+TGG + chr1_1:14661499-14661518 Msa0009820:intron 30.0%
CTTCATCTAATCAGAAATGT+GGG + chr1_1:14661500-14661519 Msa0009820:intron 30.0%
! TGTTTTCCAATGATGAGAAT+TGG + chr1_1:14661542-14661561 Msa0009820:intron 30.0%
GAACAATGTGTATTCTCAAT+AGG + chr1_1:14661785-14661804 Msa0009820:intron 30.0%
! ATAGTTGCTTTCATCTATAC+AGG + chr1_1:14661813-14661832 Msa0009820:intron 30.0%
! TAGTTGCTTTCATCTATACA+GGG + chr1_1:14661814-14661833 Msa0009820:intron 30.0%
! ATGTAAATTTTGTGTCTCCA+GGG - chr1_1:14662038-14662057 None:intergenic 30.0%
! TATGTAAATTTTGTGTCTCC+AGG - chr1_1:14662039-14662058 None:intergenic 30.0%
AAGGTTACAAGTCTACAATA+CGG + chr1_1:14662270-14662289 Msa0009820:intron 30.0%
! GCAAATTTTCTCTCATTTCT+CGG + chr1_1:14662411-14662430 Msa0009820:CDS 30.0%
! CAAATTTTCTCTCATTTCTC+GGG + chr1_1:14662412-14662431 Msa0009820:CDS 30.0%
AACTCATTAGTAGTAATGGT+AGG + chr1_1:14662443-14662462 Msa0009820:CDS 30.0%
GTTACTCATCAATAACTCTT+TGG - chr1_1:14662705-14662724 None:intergenic 30.0%
!! TTTTCCACTAATTTTGAGTG+AGG + chr1_1:14662757-14662776 Msa0009820:intron 30.0%
TATCTAATTCTATGCATGAG+GGG - chr1_1:14662851-14662870 None:intergenic 30.0%
TCTTATACCATCTCAAAGTT+TGG + chr1_1:14662926-14662945 Msa0009820:intron 30.0%
!!! TCTGATTTTTCAAGGGAATA+AGG + chr1_1:14663097-14663116 Msa0009820:intron 30.0%
!!! CTGATTTTTCAAGGGAATAA+GGG + chr1_1:14663098-14663117 Msa0009820:intron 30.0%
!! TTCTTTCAATTTTGGTGAAC+AGG + chr1_1:14663147-14663166 Msa0009820:intron 30.0%
ATATTGATGAAGATGAGGTA+TGG + chr1_1:14663238-14663257 Msa0009820:intron 30.0%
!!! TGATCTTTCATGGTGTTTTT+TGG + chr1_1:14663520-14663539 Msa0009820:intron 30.0%
CATCAAAGCAATTAGTATTC+AGG - chr1_1:14663577-14663596 None:intergenic 30.0%
TGTAAAGGTGAAAGAAAAAC+AGG - chr1_1:14663610-14663629 None:intergenic 30.0%
AGAAAAGCAATTGAGAAACA+AGG + chr1_1:14663689-14663708 Msa0009820:CDS 30.0%
CTAATTTATTAAAGTGGTGG+AGG + chr1_1:14663788-14663807 Msa0009820:intron 30.0%
!!! ATGCTATTTTCCTCCATTTT+TGG + chr1_1:14663811-14663830 Msa0009820:intron 30.0%
ATCACATGTCTTATAGTAGT+TGG + chr1_1:14663968-14663987 Msa0009820:intron 30.0%
!! TGGTACTTGCTATTTACATT+TGG + chr1_1:14663988-14664007 Msa0009820:intron 30.0%
TCTCATTCTTATTACCTTGA+TGG + chr1_1:14664304-14664323 Msa0009820:CDS 30.0%
ATGATAATTGCTAACCATCA+AGG - chr1_1:14664321-14664340 None:intergenic 30.0%
TAGACTTTACATTTATCCCA+TGG - chr1_1:14664503-14664522 None:intergenic 30.0%
AAATCAAAACCAGTGCAGAT+CGG - chr1_1:14659968-14659987 None:intergenic 35.0%
! CATATGTTTCTGTAAGTGAG+AGG - chr1_1:14660021-14660040 None:intergenic 35.0%
TCTGATGTAGAAAGAAGGAA+AGG - chr1_1:14660074-14660093 None:intergenic 35.0%
! ATTGCATGTTGCTTCAATTG+GGG - chr1_1:14660117-14660136 None:intergenic 35.0%
! CATTGCATGTTGCTTCAATT+GGG - chr1_1:14660118-14660137 None:intergenic 35.0%
! TCATTGCATGTTGCTTCAAT+TGG - chr1_1:14660119-14660138 None:intergenic 35.0%
! AAGACTGATTCAGCCAATAA+GGG - chr1_1:14660203-14660222 None:intergenic 35.0%
! AGTCTTCTCTTTTCATGTTC+TGG + chr1_1:14660217-14660236 Msa0009820:intron 35.0%
! GTCTTCTCTTTTCATGTTCT+GGG + chr1_1:14660218-14660237 Msa0009820:intron 35.0%
GGAACCCTAAATCGATTAAA+AGG - chr1_1:14660326-14660345 None:intergenic 35.0%
!!! GATTTAGGGTTCCTCTTTTT+TGG + chr1_1:14660333-14660352 Msa0009820:intron 35.0%
AACAACAACCTCCAAAAAAG+AGG - chr1_1:14660347-14660366 None:intergenic 35.0%
!! GTTGTTGGATGTTTCTGTTT+TGG + chr1_1:14660432-14660451 Msa0009820:intron 35.0%
! AAACTGATTTAGGCTGATTG+GGG + chr1_1:14660467-14660486 Msa0009820:intron 35.0%
CAAATCTGCAGAATTGTAGA+TGG + chr1_1:14660528-14660547 Msa0009820:five_prime_UTR 35.0%
TTCTGATTGTAAATCCGGAA+CGG - chr1_1:14660582-14660601 None:intergenic 35.0%
CGATTGCGATGACATAAATT+TGG - chr1_1:14660624-14660643 None:intergenic 35.0%
! TTTGTTATCAAGTGCCTTGA+GGG - chr1_1:14660871-14660890 None:intergenic 35.0%
ATTCCTTAACCATTGTCCTA+AGG + chr1_1:14660992-14661011 Msa0009820:intron 35.0%
TTCCTTAACCATTGTCCTAA+GGG + chr1_1:14660993-14661012 Msa0009820:intron 35.0%
AAGTTCATTGACACAACATG+TGG + chr1_1:14661088-14661107 Msa0009820:intron 35.0%
ACAACATGTGGAAAATGTGT+CGG + chr1_1:14661100-14661119 Msa0009820:intron 35.0%
TTCCAATTGTAAAGGCTGAT+CGG + chr1_1:14661268-14661287 Msa0009820:five_prime_UTR 35.0%
TAAACAACTTCAGCATCTCT+AGG - chr1_1:14661297-14661316 None:intergenic 35.0%
CTAACTCCAATTCTCATCAT+TGG - chr1_1:14661551-14661570 None:intergenic 35.0%
TGAGAATTGGAGTTAGTTAG+CGG + chr1_1:14661555-14661574 Msa0009820:intron 35.0%
TTCAAGTAGTGAGGAATAGA+TGG + chr1_1:14661736-14661755 Msa0009820:intron 35.0%
TCAAGTAGTGAGGAATAGAT+GGG + chr1_1:14661737-14661756 Msa0009820:intron 35.0%
CATTTAGAAGCTTAGAGTCA+CGG + chr1_1:14661890-14661909 Msa0009820:intron 35.0%
ATTTAGAAGCTTAGAGTCAC+GGG + chr1_1:14661891-14661910 Msa0009820:intron 35.0%
! GCTCATTGCCAAAAGTTTTA+TGG + chr1_1:14662062-14662081 Msa0009820:intron 35.0%
! TGAGGCAACCATAAAACTTT+TGG - chr1_1:14662073-14662092 None:intergenic 35.0%
TGCTAATCGCTGTCATAATT+AGG - chr1_1:14662187-14662206 None:intergenic 35.0%
ACTTGTAACCTTATACACAG+GGG - chr1_1:14662262-14662281 None:intergenic 35.0%
GACTTGTAACCTTATACACA+GGG - chr1_1:14662263-14662282 None:intergenic 35.0%
AGACTTGTAACCTTATACAC+AGG - chr1_1:14662264-14662283 None:intergenic 35.0%
AACTATCGATAATGCAGTGT+TGG - chr1_1:14662327-14662346 None:intergenic 35.0%
GCTCAACTCATTAGTAGTAA+TGG + chr1_1:14662439-14662458 Msa0009820:CDS 35.0%
! TAAATTCATTGACTGATGCG+TGG + chr1_1:14662526-14662545 Msa0009820:intron 35.0%
ACAGGAAAAGAAAAAGGGAA+CGG - chr1_1:14662580-14662599 None:intergenic 35.0%
! TGGTCTATCATTAGTTGATG+TGG + chr1_1:14662806-14662825 Msa0009820:intron 35.0%
ATCTAATTCTATGCATGAGG+GGG - chr1_1:14662850-14662869 None:intergenic 35.0%
! GGAGTGAAGTTTTGCAATTT+TGG + chr1_1:14662881-14662900 Msa0009820:intron 35.0%
GAAGTATAGAGAAACATGCA+AGG - chr1_1:14662957-14662976 None:intergenic 35.0%
TTCAGCATTTAGACCCTTAT+TGG - chr1_1:14663188-14663207 None:intergenic 35.0%
GAAATCTCCTAAAATTGGTG+TGG + chr1_1:14663265-14663284 Msa0009820:intron 35.0%
AGGTGAAAGAAAAACAGGAA+AGG - chr1_1:14663605-14663624 None:intergenic 35.0%
!!! TCCTCCATTTTTGGTTGTTA+TGG + chr1_1:14663820-14663839 Msa0009820:intron 35.0%
!!! ATTTTTGGTTGTTATGGCAG+CGG + chr1_1:14663826-14663845 Msa0009820:intron 35.0%
TGCACACAAAAAAGGTTTGT+AGG + chr1_1:14664068-14664087 Msa0009820:intron 35.0%
AATACCCTAAAAGAGTTGCT+TGG + chr1_1:14664197-14664216 Msa0009820:CDS 35.0%
! TTCACCAAGCAACTCTTTTA+GGG - chr1_1:14664204-14664223 None:intergenic 35.0%
! ATTCACCAAGCAACTCTTTT+AGG - chr1_1:14664205-14664224 None:intergenic 35.0%
ATGCCAACCTTTATCGTAAT+TGG + chr1_1:14664390-14664409 Msa0009820:CDS 35.0%
ACTTTACATTTATCCCATGG+AGG - chr1_1:14664500-14664519 None:intergenic 35.0%
AAGGGTCTGATGTAGAAAGA+AGG - chr1_1:14660079-14660098 None:intergenic 40.0%
GGGGAGGTTGAAGAATTAAA+GGG - chr1_1:14660097-14660116 None:intergenic 40.0%
! TTGCATGTTGCTTCAATTGG+GGG - chr1_1:14660116-14660135 None:intergenic 40.0%
CCAATAAGGGAAGGAGAATA+AGG - chr1_1:14660190-14660209 None:intergenic 40.0%
CCTTATTCTCCTTCCCTTAT+TGG + chr1_1:14660187-14660206 Msa0009820:intron 40.0%
! GAAGACTGATTCAGCCAATA+AGG - chr1_1:14660204-14660223 None:intergenic 40.0%
! TCTGGGTTTGCTTGTGAAAT+TGG + chr1_1:14660235-14660254 Msa0009820:intron 40.0%
!!! TTAGGGTTCCTCTTTTTTGG+AGG + chr1_1:14660336-14660355 Msa0009820:intron 40.0%
GTTCCGGATTTACAATCAGA+AGG + chr1_1:14660581-14660600 Msa0009820:five_prime_UTR 40.0%
!! GTTTGTTATCAAGTGCCTTG+AGG - chr1_1:14660872-14660891 None:intergenic 40.0%
! TTTTGCTAACCAATGCCCTT+AGG - chr1_1:14661011-14661030 None:intergenic 40.0%
AAGCAGCAAAAGAGCTTAAC+TGG + chr1_1:14661331-14661350 Msa0009820:CDS 40.0%
AGCTTAACTGGAAGTAAGTG+TGG + chr1_1:14661343-14661362 Msa0009820:intron 40.0%
GAGGAATAGATGGGAGTTAT+AGG + chr1_1:14661746-14661765 Msa0009820:intron 40.0%
!! AAGTTCATTGCTTTTGACGC+TGG - chr1_1:14662388-14662407 None:intergenic 40.0%
CAGTCCTCACTCAAAATTAG+TGG - chr1_1:14662764-14662783 None:intergenic 40.0%
! GAGGACTGTCAAAGTCTTAT+TGG + chr1_1:14662776-14662795 Msa0009820:intron 40.0%
! ATTTTGGACATGCCACAAGT+TGG + chr1_1:14662897-14662916 Msa0009820:intron 40.0%
ATAAGAGTCGATCCAACTTG+TGG - chr1_1:14662912-14662931 None:intergenic 40.0%
! AACACAGCCACACCAATTTT+AGG - chr1_1:14663275-14663294 None:intergenic 40.0%
!!! AGTTTTTTAGTCTACAGGGC+TGG + chr1_1:14663342-14663361 Msa0009820:intron 40.0%
!! GTTGTTTACATAGGTTGGTC+AGG + chr1_1:14663649-14663668 Msa0009820:intron 40.0%
GCCATAACAACCAAAAATGG+AGG - chr1_1:14663824-14663843 None:intergenic 40.0%
GCTGCCATAACAACCAAAAA+TGG - chr1_1:14663827-14663846 None:intergenic 40.0%
ATAAAACGGTTGGGAGTTCA+AGG + chr1_1:14663877-14663896 Msa0009820:intron 40.0%
ATACGAGGTGCACACAAAAA+AGG + chr1_1:14664060-14664079 Msa0009820:intron 40.0%
CAAAAAAGGTTTGTAGGAGC+AGG + chr1_1:14664074-14664093 Msa0009820:intron 40.0%
ATGTTCTCGCTATGAACCTT+GGG + chr1_1:14664134-14664153 Msa0009820:intron 40.0%
ATCGTTGAGCACTCAAATGA+TGG + chr1_1:14664242-14664261 Msa0009820:CDS 40.0%
TCAAATGATGGTTCAGGAAC+TGG + chr1_1:14664254-14664273 Msa0009820:CDS 40.0%
CAAAAGAATGACCATGACTG+AGG + chr1_1:14664427-14664446 Msa0009820:CDS 40.0%
!! ATCAGTTTTTGGACCTCCAT+GGG + chr1_1:14664484-14664503 Msa0009820:CDS 40.0%
AAGAAGGGGAACGAGAGAAA+CGG + chr1_1:14659855-14659874 Msa0009820:five_prime_UTR 45.0%
GGGGGAGGTTGAAGAATTAA+AGG - chr1_1:14660098-14660117 None:intergenic 45.0%
CTGATTCAGCCAATAAGGGA+AGG - chr1_1:14660199-14660218 None:intergenic 45.0%
!! TAGATGGCCTTGCTGTTTGA+GGG + chr1_1:14660544-14660563 Msa0009820:five_prime_UTR 45.0%
TGATTGTAAATCCGGAACGG+CGG - chr1_1:14660579-14660598 None:intergenic 45.0%
AATGCTAACAAGTGCCCTCA+AGG + chr1_1:14660854-14660873 Msa0009820:intron 45.0%
TGCCCTTAGGACAATGGTTA+AGG - chr1_1:14660998-14661017 None:intergenic 45.0%
! AACCATTGTCCTAAGGGCAT+TGG + chr1_1:14660999-14661018 Msa0009820:intron 45.0%
AACCAATGCCCTTAGGACAA+TGG - chr1_1:14661004-14661023 None:intergenic 45.0%
CTCCGATCAGCCTTTACAAT+TGG - chr1_1:14661273-14661292 None:intergenic 45.0%
GTTGTTAAAGCTCTCCTCTC+TGG + chr1_1:14661401-14661420 Msa0009820:intron 45.0%
CTATAGATCTTTCGTTGCCC+TGG + chr1_1:14662018-14662037 Msa0009820:intron 45.0%
TGATGCGTGGTGCTCATTAA+AGG + chr1_1:14662539-14662558 Msa0009820:intron 45.0%
CGTGGTGCTCATTAAAGGTT+CGG + chr1_1:14662544-14662563 Msa0009820:intron 45.0%
! GGCATGTCCAAACTTTGAGA+TGG - chr1_1:14662936-14662955 None:intergenic 45.0%
!! CTGCAGACTTCTGAAATTGC+AGG - chr1_1:14663012-14663031 None:intergenic 45.0%
!! ATAGGTTGGTCAGGATGTTG+TGG + chr1_1:14663658-14663677 Msa0009820:intron 45.0%
GGTTGGGAGTTCAAGGATAT+AGG + chr1_1:14663884-14663903 Msa0009820:intron 45.0%
AAGGTTTGTAGGAGCAGGTT+AGG + chr1_1:14664079-14664098 Msa0009820:intron 45.0%
GATGTTCTCGCTATGAACCT+TGG + chr1_1:14664133-14664152 Msa0009820:intron 45.0%
TCTCTAAGCACCATCTGTGA+AGG - chr1_1:14664178-14664197 None:intergenic 45.0%
GAGCACTCAAATGATGGTTC+AGG + chr1_1:14664248-14664267 Msa0009820:CDS 45.0%
GCGCCAATTACGATAAAGGT+TGG - chr1_1:14664396-14664415 None:intergenic 45.0%
AGCTGCGCCAATTACGATAA+AGG - chr1_1:14664400-14664419 None:intergenic 45.0%
!! AATCGGTTTTTGGACCTCCA+TGG + chr1_1:14664458-14664477 Msa0009820:CDS 45.0%
!! ATCGGTTTTTGGACCTCCAT+GGG + chr1_1:14664459-14664478 Msa0009820:CDS 45.0%
CAAAAACTGATGTCCCATGG+AGG - chr1_1:14664475-14664494 None:intergenic 45.0%
! CTCCATGGGACATCAGTTTT+TGG + chr1_1:14664473-14664492 Msa0009820:CDS 45.0%
GTCCAAAAACTGATGTCCCA+TGG - chr1_1:14664478-14664497 None:intergenic 45.0%
!! CATCAGTTTTTGGACCTCCA+TGG + chr1_1:14664483-14664502 Msa0009820:CDS 45.0%
AGAAGGGGAACGAGAGAAAC+GGG + chr1_1:14659856-14659875 Msa0009820:five_prime_UTR 50.0%
AGAAAGAACGGCAGAGGAGA+GGG + chr1_1:14659905-14659924 Msa0009820:five_prime_UTR 50.0%
AGTGAGGGAGAGAAGTAGGA+GGG - chr1_1:14660046-14660065 None:intergenic 50.0%
TGAGAGTGAGGGAGAGAAGT+AGG - chr1_1:14660050-14660069 None:intergenic 50.0%
GAAGGAAAGGCTGAGAGTGA+GGG - chr1_1:14660061-14660080 None:intergenic 50.0%
AGAAGGAAAGGCTGAGAGTG+AGG - chr1_1:14660062-14660081 None:intergenic 50.0%
! CATGTTGCTTCAATTGGGGG+AGG - chr1_1:14660113-14660132 None:intergenic 50.0%
! GGCTGATTGGGGACTGTTTT+TGG + chr1_1:14660478-14660497 Msa0009820:intron 50.0%
!! GTAGATGGCCTTGCTGTTTG+AGG + chr1_1:14660543-14660562 Msa0009820:five_prime_UTR 50.0%
GCGAATTCCCTCAAACAGCA+AGG - chr1_1:14660554-14660573 None:intergenic 50.0%
!! ACTTGGTGCCCCTGTGTATA+AGG + chr1_1:14662251-14662270 Msa0009820:intron 50.0%
ATATTAAGATGCCCTGCCCC+AGG - chr1_1:14663220-14663239 None:intergenic 50.0%
TAGCTGCTACGACAAACCCA+AGG - chr1_1:14664153-14664172 None:intergenic 50.0%
TTGGGTTTGTCGTAGCAGCT+AGG + chr1_1:14664152-14664171 Msa0009820:intron 50.0%
GGAACGAGAGAAACGGGAAC+AGG + chr1_1:14659862-14659881 Msa0009820:five_prime_UTR 55.0%
GAGAGAAACGGGAACAGGAG+AGG + chr1_1:14659867-14659886 Msa0009820:five_prime_UTR 55.0%
ACGGGAACAGGAGAGGAAGA+AGG + chr1_1:14659874-14659893 Msa0009820:five_prime_UTR 55.0%
CGGGAACAGGAGAGGAAGAA+GGG + chr1_1:14659875-14659894 Msa0009820:five_prime_UTR 55.0%
GGGAACAGGAGAGGAAGAAG+GGG + chr1_1:14659876-14659895 Msa0009820:five_prime_UTR 55.0%
GGAACAGGAGAGGAAGAAGG+GGG + chr1_1:14659877-14659896 Msa0009820:five_prime_UTR 55.0%
GAACAGGAGAGGAAGAAGGG+GGG + chr1_1:14659878-14659897 Msa0009820:five_prime_UTR 55.0%
AAGGGGGGCGACAGAAAGAA+CGG + chr1_1:14659893-14659912 Msa0009820:five_prime_UTR 55.0%
CAGAAAGAACGGCAGAGGAG+AGG + chr1_1:14659904-14659923 Msa0009820:five_prime_UTR 55.0%
!! GTGCAGATCGGAGTGTTGGA+CGG - chr1_1:14659956-14659975 None:intergenic 55.0%
TCCAACACTCCGATCTGCAC+TGG + chr1_1:14659956-14659975 Msa0009820:five_prime_UTR 55.0%
ACCAGTGCAGATCGGAGTGT+TGG - chr1_1:14659960-14659979 None:intergenic 55.0%
GAGTGAGGGAGAGAAGTAGG+AGG - chr1_1:14660047-14660066 None:intergenic 55.0%
AATGCTGAACCACACCAGCC+TGG + chr1_1:14663199-14663218 Msa0009820:intron 55.0%
ATGCTGAACCACACCAGCCT+GGG + chr1_1:14663200-14663219 Msa0009820:intron 55.0%
TGGATCTGGCAGCTAAGCCT+TGG + chr1_1:14663924-14663943 Msa0009820:intron 55.0%
AGCAGCTAGGCCTTCACAGA+TGG + chr1_1:14664165-14664184 Msa0009820:intron 55.0%
TGGTTCAGGAACTGGTGCAG+TGG + chr1_1:14664262-14664281 Msa0009820:CDS 55.0%
GGCGACAGAAAGAACGGCAG+AGG + chr1_1:14659899-14659918 Msa0009820:five_prime_UTR 60.0%
GGAATTCGCTTCCGCCGTTC+CGG + chr1_1:14660565-14660584 Msa0009820:five_prime_UTR 60.0%
TGCTGAACCACACCAGCCTG+GGG + chr1_1:14663201-14663220 Msa0009820:intron 60.0%
GTGTTGGACGGCGAGGTCGA+CGG - chr1_1:14659944-14659963 None:intergenic 65.0%
!! GATCGGAGTGTTGGACGGCG+AGG - chr1_1:14659951-14659970 None:intergenic 65.0%
AACCACACCAGCCTGGGGCA+GGG + chr1_1:14663206-14663225 Msa0009820:intron 65.0%
TAAGATGCCCTGCCCCAGGC+TGG - chr1_1:14663216-14663235 None:intergenic 65.0%
TTGGACGGCGAGGTCGACGG+CGG - chr1_1:14659941-14659960 None:intergenic 70.0%
GAACCACACCAGCCTGGGGC+AGG + chr1_1:14663205-14663224 Msa0009820:intron 70.0%
TGCCCTGCCCCAGGCTGGTG+TGG - chr1_1:14663211-14663230 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 14659854 14664523 14659854 ID=Msa0009820;Name=Msa0009820
chr1_1 mRNA 14659854 14664523 14659854 ID=Msa0009820-mRNA-1;Parent=Msa0009820;Name=Msa0009820-mRNA-1;_AED=0.35;_eAED=0.38;_QI=519|0.5|0.57|1|0.33|0.42|7|0|190
chr1_1 exon 14659854 14660178 14659854 ID=Msa0009820-mRNA-1:exon:5407;Parent=Msa0009820-mRNA-1
chr1_1 exon 14660517 14660602 14660517 ID=Msa0009820-mRNA-1:exon:5408;Parent=Msa0009820-mRNA-1
chr1_1 exon 14660694 14660764 14660694 ID=Msa0009820-mRNA-1:exon:5409;Parent=Msa0009820-mRNA-1
chr1_1 exon 14661264 14661355 14661264 ID=Msa0009820-mRNA-1:exon:5410;Parent=Msa0009820-mRNA-1
chr1_1 exon 14662389 14662483 14662389 ID=Msa0009820-mRNA-1:exon:5411;Parent=Msa0009820-mRNA-1
chr1_1 exon 14663662 14663730 14663662 ID=Msa0009820-mRNA-1:exon:5412;Parent=Msa0009820-mRNA-1
chr1_1 exon 14664170 14664523 14664170 ID=Msa0009820-mRNA-1:exon:5413;Parent=Msa0009820-mRNA-1
chr1_1 five_prime_UTR 14659854 14660178 14659854 ID=Msa0009820-mRNA-1:five_prime_utr;Parent=Msa0009820-mRNA-1
chr1_1 five_prime_UTR 14660517 14660602 14660517 ID=Msa0009820-mRNA-1:five_prime_utr;Parent=Msa0009820-mRNA-1
chr1_1 five_prime_UTR 14660694 14660764 14660694 ID=Msa0009820-mRNA-1:five_prime_utr;Parent=Msa0009820-mRNA-1
chr1_1 five_prime_UTR 14661264 14661300 14661264 ID=Msa0009820-mRNA-1:five_prime_utr;Parent=Msa0009820-mRNA-1
chr1_1 CDS 14661301 14661355 14661301 ID=Msa0009820-mRNA-1:cds;Parent=Msa0009820-mRNA-1
chr1_1 CDS 14662389 14662483 14662389 ID=Msa0009820-mRNA-1:cds;Parent=Msa0009820-mRNA-1
chr1_1 CDS 14663662 14663730 14663662 ID=Msa0009820-mRNA-1:cds;Parent=Msa0009820-mRNA-1
chr1_1 CDS 14664170 14664523 14664170 ID=Msa0009820-mRNA-1:cds;Parent=Msa0009820-mRNA-1
Gene Sequence

>Msa0009820

ATGCTGAAGTTGTTTATGCATCAACAAAAAAAGCAGCAAAAGAGCTTAACTGGAACGTCAAAAGCAATGAACTTTAAGCAAATTTTCTCTCATTTCTCGGGATCTGCTCAACTCATTAGTAGTAATGGTAGGTTTGTTGAGTTAATTAAGGTTGGTCAGGATGTTGTGGCTGAATTGAGAAAAGCAATTGAGAAACAAGGTCTTGATATGAACTTAACACTAGGCCTTCACAGATGGTGCTTAGAGAATACCCTAAAAGAGTTGCTTGGTGAATGTGTATCAGATAGTGTTATCGTTGAGCACTCAAATGATGGTTCAGGAACTGGTGCAGTGGTGCTGCACTTCTTGCTGCTTCTCATTCTTATTACCTTGATGGTTAGCAATTATCATGTTAAGATGTTTATCGATAAACGAATGTTGTTCAAAGTTGAAGTGAGTGATGCCAACCTTTATCGTAATTGGCGCAGCTATACTGTCAAAAGAATGACCATGACTGAGGAAATAATTAATCGGTTTTTGGACCTCCATGGGACATCAGTTTTTGGACCTCCATGGGATAAATGTAAAGTCTAA
Protein sequence

>Msa0009820

MLKLFMHQQKKQQKSLTGTSKAMNFKQIFSHFSGSAQLISSNGRFVELIKVGQDVVAELRKAIEKQGLDMNLTLGLHRWCLENTLKELLGECVSDSVIVEHSNDGSGTGAVVLHFLLLLILITLMVSNYHVKMFIDKRMLFKVEVSDANLYRNWRSYTVKRMTMTEEIINRFLDLHGTSVFGPPWDKCKV*