Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010710 | Msa1410330 | 0.852002 | 6.140997e-61 | -8.615850e-47 |
| Msa0010710 | Msa1410340 | 0.809799 | 1.582340e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0010710 | MtrunA17_Chr4g0005211 | 72.727 | 44 | 12 | 0 | 120 | 163 | 4 | 47 | 4.54e-12 | 61.2 |
| Msa0010710 | MtrunA17_Chr3g0122061 | 68.182 | 44 | 14 | 0 | 121 | 164 | 33 | 76 | 6.64e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 57 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTGGGTTGTGTTGTGTT+GGG | 0.203986 | 1_1:+16216053 | Msa0010710:CDS |
| TGGGTTTCACAGGTTGTTCA+TGG | 0.287508 | 1_1:+16214215 | Msa0010710:CDS |
| GTTGTTCATGGTGGAGGGTT+GGG | 0.297400 | 1_1:+16214227 | Msa0010710:CDS |
| GGTTTGACTACTATGTTATT+TGG | 0.301353 | 1_1:+16216301 | Msa0010710:CDS |
| CATTGTCTCTTACTTGTGTT+CGG | 0.305532 | 1_1:+16215994 | Msa0010710:CDS |
| GCTTGTGGGTTGTGTTGTGT+TGG | 0.310318 | 1_1:+16216052 | Msa0010710:CDS |
| ATTGTCTCTTACTTGTGTTC+GGG | 0.356017 | 1_1:+16215995 | Msa0010710:CDS |
| TGGTGGAGGGTTGGGTTTCA+CGG | 0.369899 | 1_1:+16214235 | Msa0010710:CDS |
| TGGTTCTTGACGTTGTTGAT+TGG | 0.374951 | 1_1:+16216510 | Msa0010710:CDS |
| GGTTGTTCATGGTGGAGGGT+TGG | 0.379353 | 1_1:+16214226 | Msa0010710:CDS |
| GGTTCTTGACGTTGTTGATT+GGG | 0.380852 | 1_1:+16216511 | Msa0010710:CDS |
| TCGATCAGAACTTTCTCATT+CGG | 0.393624 | 1_1:+16216280 | Msa0010710:CDS |
| TTGTGGGTTGTGTTGTGTTG+GGG | 0.401258 | 1_1:+16216054 | Msa0010710:CDS |
| TCACAGGTTGTTCATGGTGG+AGG | 0.405094 | 1_1:+16214221 | Msa0010710:CDS |
| GTCGGTGAGTCTTCAACGGT+TGG | 0.418675 | 1_1:+16216255 | Msa0010710:CDS |
| AGGGAGTGGTGTTGCCGTCT+TGG | 0.433095 | 1_1:+16215852 | Msa0010710:CDS |
| CAGCTTGTGACGTTGGTTGA+GGG | 0.434104 | 1_1:+16216581 | Msa0010710:CDS |
| CACAGGTTGTTCATGGTGGA+GGG | 0.439277 | 1_1:+16214222 | Msa0010710:CDS |
| ATTTGAGGGCTGGGTTTCAC+AGG | 0.449555 | 1_1:+16214205 | Msa0010710:CDS |
| GGGAGTGGTGTTGCCGTCTT+GGG | 0.451301 | 1_1:+16215853 | Msa0010710:CDS |
| TATTTGGTGGTTTGTCTATG+TGG | 0.462582 | 1_1:+16216317 | Msa0010710:CDS |
| GCAGCTTGTGACGTTGGTTG+AGG | 0.469702 | 1_1:+16216580 | Msa0010710:CDS |
| TTGACTACTATGTTATTTGG+TGG | 0.492151 | 1_1:+16216304 | Msa0010710:CDS |
| GTTTCGAATGGACGTGGTGA+AGG | 0.492737 | 1_1:+16215832 | Msa0010710:CDS |
| TCGGTGAGTCTTCAACGGTT+GGG | 0.493764 | 1_1:+16216256 | Msa0010710:CDS |
| AAAGGTTGTTGGTTGTGTGT+TGG | 0.496072 | 1_1:+16216490 | Msa0010710:intron |
| TGTGGGTTGTGTTGTGTTGG+GGG | 0.521046 | 1_1:+16216055 | Msa0010710:CDS |
| GTATGCGAGCAGCGGAATGT+AGG | 0.536609 | 1_1:+16216537 | Msa0010710:CDS |
| CAGACTGCATCACCACCACT+TGG | 0.546348 | 1_1:-16215882 | None:intergenic |
| TTTGTGGTGTGAGGAGGTGT+CGG | 0.556495 | 1_1:+16216237 | Msa0010710:CDS |
| GTTTCACAGGTTGTTCATGG+TGG | 0.556644 | 1_1:+16214218 | Msa0010710:CDS |
| TGATGATGATGAGGAGGAGG+AGG | 0.560821 | 1_1:+16216028 | Msa0010710:CDS |
| CGATGATGATGATGAGGAGG+AGG | 0.566861 | 1_1:+16216025 | Msa0010710:CDS |
| GTTCTTGACGTTGTTGATTG+GGG | 0.571309 | 1_1:+16216512 | Msa0010710:CDS |
| CGATGGTGTTGCTGTTGTGA+AGG | 0.574601 | 1_1:+16216342 | Msa0010710:CDS |
| TGGTGTTGCTGTTGTGAAGG+TGG | 0.575806 | 1_1:+16216345 | Msa0010710:CDS |
| TTGTCTCTTACTTGTGTTCG+GGG | 0.578818 | 1_1:+16215996 | Msa0010710:CDS |
| TTTCGAATGGACGTGGTGAA+GGG | 0.582022 | 1_1:+16215833 | Msa0010710:CDS |
| TTTGTGGCAGCTTGTGACGT+TGG | 0.587915 | 1_1:+16216574 | Msa0010710:CDS |
| GTGGATGCTCTTAGTCATGA+TGG | 0.596356 | 1_1:+16212720 | Msa0010710:CDS |
| GGTTTGTCTATGTGGATCGA+TGG | 0.596675 | 1_1:+16216325 | Msa0010710:CDS |
| GTGTGGCGATGATGATGATG+AGG | 0.596717 | 1_1:+16216019 | Msa0010710:CDS |
| CGTAAAGTAGCAACATACAA+AGG | 0.603404 | 1_1:-16216652 | None:intergenic |
| AATGGACGTGGTGAAGGGAG+TGG | 0.607337 | 1_1:+16215838 | Msa0010710:CDS |
| GGTGAAGTTTCGAATGGACG+TGG | 0.620357 | 1_1:+16215826 | Msa0010710:CDS |
| AGGTGTCGGTGAGTCTTCAA+CGG | 0.623839 | 1_1:+16216251 | Msa0010710:CDS |
| TTGGGGTTGTATGCGAGCAG+CGG | 0.628640 | 1_1:+16216529 | Msa0010710:CDS |
| CACTTGGACATCTCCCAAGA+CGG | 0.633352 | 1_1:-16215866 | None:intergenic |
| GAGCAGCGGAATGTAGGTGG+TGG | 0.645053 | 1_1:+16216543 | Msa0010710:CDS |
| TGGCGATGATGATGATGAGG+AGG | 0.645968 | 1_1:+16216022 | Msa0010710:CDS |
| GTGTGGTGATCTCAGATCGA+AGG | 0.648116 | 1_1:+16215906 | Msa0010710:CDS |
| TGTCTCTTACTTGTGTTCGG+GGG | 0.659716 | 1_1:+16215997 | Msa0010710:CDS |
| TGCGAGCAGCGGAATGTAGG+TGG | 0.665079 | 1_1:+16216540 | Msa0010710:CDS |
| ATGACTAAGAGCATCCACAA+TGG | 0.677772 | 1_1:-16212715 | None:intergenic |
| CTTGGGAGATGTCCAAGTGG+TGG | 0.686922 | 1_1:+16215870 | Msa0010710:CDS |
| GTGGTGATGCAGTCTGCGTG+TGG | 0.689294 | 1_1:+16215889 | Msa0010710:CDS |
| CGTCTTGGGAGATGTCCAAG+TGG | 0.753276 | 1_1:+16215867 | Msa0010710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTAAA+AGG | - | chr1_1:16213161-16213180 | None:intergenic | 0.0% |
| !! | AAGTTTAATCATTTAAAAAT+TGG | - | chr1_1:16214454-16214473 | None:intergenic | 10.0% |
| !!! | CTTTTAAGTTAAAATTTTAA+CGG | + | chr1_1:16215413-16215432 | Msa0010710:intron | 10.0% |
| !! | TAAAAATATCTTACAAAATT+TGG | - | chr1_1:16215530-16215549 | None:intergenic | 10.0% |
| !!! | AATTTTGTAAGATATTTTTA+CGG | + | chr1_1:16215530-16215549 | Msa0010710:intron | 10.0% |
| !! | ATTAAGGAACATTTAAAAAT+TGG | + | chr1_1:16212851-16212870 | Msa0010710:intron | 15.0% |
| !!! | TTAAATGATTAAATTTTGCA+GGG | - | chr1_1:16212907-16212926 | None:intergenic | 15.0% |
| !!! | TTTAAATGATTAAATTTTGC+AGG | - | chr1_1:16212908-16212927 | None:intergenic | 15.0% |
| !!! | GAAGTTTTAAAAAAAAATCT+GGG | - | chr1_1:16213101-16213120 | None:intergenic | 15.0% |
| !!! | TGAAGTTTTAAAAAAAAATC+TGG | - | chr1_1:16213102-16213121 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTAAAAGGC+TGG | - | chr1_1:16213157-16213176 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr1_1:16213291-16213310 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr1_1:16213290-16213309 | Msa0010710:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr1_1:16213314-16213333 | Msa0010710:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr1_1:16213417-16213436 | Msa0010710:intron | 15.0% |
| !! | CAAATCTAAAAATACATAAA+CGG | - | chr1_1:16214174-16214193 | None:intergenic | 15.0% |
| !! | AAAATGAAAGATAATTCATT+GGG | - | chr1_1:16214716-16214735 | None:intergenic | 15.0% |
| !! | AAAAATGAAAGATAATTCAT+TGG | - | chr1_1:16214717-16214736 | None:intergenic | 15.0% |
| !!! | TTAATGACATATTTTGATAA+TGG | + | chr1_1:16214762-16214781 | Msa0010710:intron | 15.0% |
| !! | ATTAAATGACTATCAAAATA+GGG | - | chr1_1:16214812-16214831 | None:intergenic | 15.0% |
| !! | AATTAAATGACTATCAAAAT+AGG | - | chr1_1:16214813-16214832 | None:intergenic | 15.0% |
| !!! | TTTTGATAGTCATTTAATTT+TGG | + | chr1_1:16214814-16214833 | Msa0010710:intron | 15.0% |
| !!! | TTATTTTTTTAATGAGCAAA+TGG | + | chr1_1:16215742-16215761 | Msa0010710:intron | 15.0% |
| !!! | TATTTTTTTAATGAGCAAAT+GGG | + | chr1_1:16215743-16215762 | Msa0010710:intron | 15.0% |
| !!! | TAAATGATTAAATTTTGCAG+GGG | - | chr1_1:16212906-16212925 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr1_1:16213300-16213319 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr1_1:16213377-16213396 | Msa0010710:intron | 20.0% |
| !! | TTAACGAGTTTAAATCAAAA+TGG | + | chr1_1:16213972-16213991 | Msa0010710:intron | 20.0% |
| !! | TAACGAGTTTAAATCAAAAT+GGG | + | chr1_1:16213973-16213992 | Msa0010710:intron | 20.0% |
| !! | GGAAAAAAATTGAGAAAAAA+TGG | - | chr1_1:16214070-16214089 | None:intergenic | 20.0% |
| !!! | ACAATTTTCTCTCAATATTT+CGG | + | chr1_1:16214093-16214112 | Msa0010710:intron | 20.0% |
| !!! | TTTTTAGATTTGAGTTTTGT+TGG | + | chr1_1:16214182-16214201 | Msa0010710:intron | 20.0% |
| !!! | TAAATGTTTCATTTTGCATT+TGG | + | chr1_1:16214323-16214342 | Msa0010710:intron | 20.0% |
| !! | TTAAATGATTAAACTTTGAG+AGG | + | chr1_1:16214458-16214477 | Msa0010710:intron | 20.0% |
| !! | TCACAATATTTCACAAAATA+AGG | + | chr1_1:16214599-16214618 | Msa0010710:intron | 20.0% |
| !! | AAAATAAGTTGTGTTCATTA+TGG | - | chr1_1:16214667-16214686 | None:intergenic | 20.0% |
| !!! | ACAACTTATTTTGTTTTGTT+GGG | + | chr1_1:16214675-16214694 | Msa0010710:intron | 20.0% |
| !!! | TATTTTGATAATGGAACAAA+TGG | + | chr1_1:16214771-16214790 | Msa0010710:intron | 20.0% |
| !! | ATCTTAACAAGAATTAGTTA+AGG | + | chr1_1:16214941-16214960 | Msa0010710:intron | 20.0% |
| !! | GAAAATTTATACTACTGTAA+AGG | - | chr1_1:16215104-16215123 | None:intergenic | 20.0% |
| !! | TTAAAGATTTGGCTATATAT+CGG | - | chr1_1:16215146-16215165 | None:intergenic | 20.0% |
| !! | ATATATAGCCAAATCTTTAA+TGG | + | chr1_1:16215146-16215165 | Msa0010710:intron | 20.0% |
| !! | ACAAAAATGACAAAAAAAAG+TGG | + | chr1_1:16215712-16215731 | Msa0010710:intron | 20.0% |
| !!! | ATTTTTTTAATGAGCAAATG+GGG | + | chr1_1:16215744-16215763 | Msa0010710:intron | 20.0% |
| !!! | TGAATTTTTATTGGAGTTAT+GGG | + | chr1_1:16215795-16215814 | Msa0010710:CDS | 20.0% |
| !! | TTAAAAAAACATAGGATGTT+TGG | + | chr1_1:16216119-16216138 | Msa0010710:intron | 20.0% |
| !!! | GGTTCTTTTTTATATATGTT+GGG | + | chr1_1:16216602-16216621 | Msa0010710:CDS | 20.0% |
| ! | TTGAATTTGAATATTGCAGT+TGG | + | chr1_1:16212774-16212793 | Msa0010710:intron | 25.0% |
| ! | ATGAGGCAATAATTAAGTTA+AGG | + | chr1_1:16212803-16212822 | Msa0010710:intron | 25.0% |
| ! | TTAAATGTTCCTTAATTGCA+GGG | - | chr1_1:16212847-16212866 | None:intergenic | 25.0% |
| ! | TTTAAATGTTCCTTAATTGC+AGG | - | chr1_1:16212848-16212867 | None:intergenic | 25.0% |
| ! | AATGATTAAGAGAAAGAGAA+TGG | + | chr1_1:16213257-16213276 | Msa0010710:intron | 25.0% |
| !!! | CTTGTTTCTCATAGTTTTAA+TGG | - | chr1_1:16213491-16213510 | None:intergenic | 25.0% |
| ! | ATTGAAAATGAAGATGAAGA+TGG | - | chr1_1:16213753-16213772 | None:intergenic | 25.0% |
| ! | AACGAGTTTAAATCAAAATG+GGG | + | chr1_1:16213974-16213993 | Msa0010710:intron | 25.0% |
| !!! | AAACTTCGATACTTGTTTTT+CGG | - | chr1_1:16214625-16214644 | None:intergenic | 25.0% |
| !!! | CACAACTTATTTTGTTTTGT+TGG | + | chr1_1:16214674-16214693 | Msa0010710:intron | 25.0% |
| !! | TTATCAAATGAGGACATTTT+TGG | + | chr1_1:16214845-16214864 | Msa0010710:intron | 25.0% |
| ! | TAGCATTAAATACCCTATAA+AGG | - | chr1_1:16214919-16214938 | None:intergenic | 25.0% |
| !! | GTAGTAACAAGTCTTTTTAT+GGG | - | chr1_1:16215172-16215191 | None:intergenic | 25.0% |
| !! | TGTAGTAACAAGTCTTTTTA+TGG | - | chr1_1:16215173-16215192 | None:intergenic | 25.0% |
| ! | AACAAAGACAATATCAATGT+GGG | - | chr1_1:16215255-16215274 | None:intergenic | 25.0% |
| ! | ATATGTTTGTATCAACATTG+AGG | + | chr1_1:16215461-16215480 | Msa0010710:intron | 25.0% |
| !!! | TAAGATATTTTTACGGAGTT+AGG | + | chr1_1:16215537-16215556 | Msa0010710:intron | 25.0% |
| !!! | AAGATATTTTTACGGAGTTA+GGG | + | chr1_1:16215538-16215557 | Msa0010710:intron | 25.0% |
| ! | TGCATAATATATGTAACGAT+TGG | + | chr1_1:16215626-16215645 | Msa0010710:intron | 25.0% |
| ! | GTCTAAAAATTCACTTAAAG+TGG | - | chr1_1:16215679-16215698 | None:intergenic | 25.0% |
| ! | AAAATGACAAAAAAAAGTGG+TGG | + | chr1_1:16215715-16215734 | Msa0010710:intron | 25.0% |
| !! | TGAGACAACTGAATTTTTAT+TGG | + | chr1_1:16215786-16215805 | Msa0010710:CDS | 25.0% |
| !! | CTGAATTTTTATTGGAGTTA+TGG | + | chr1_1:16215794-16215813 | Msa0010710:CDS | 25.0% |
| !!! | GGGTTCTTTTTTATATATGT+TGG | + | chr1_1:16216601-16216620 | Msa0010710:CDS | 25.0% |
| !!! | TTTTTTATATATGTTGGGTG+AGG | + | chr1_1:16216607-16216626 | Msa0010710:CDS | 25.0% |
| !! | TTTTTATATATGTTGGGTGA+GGG | + | chr1_1:16216608-16216627 | Msa0010710:CDS | 25.0% |
| AATTTGAATATTGCAGTTGG+AGG | + | chr1_1:16212777-16212796 | Msa0010710:intron | 30.0% | |
| !!! | TAAATGTGTCATTTTGCGTT+TGG | - | chr1_1:16213031-16213050 | None:intergenic | 30.0% |
| AAAGATGAATTGTTGGATTG+TGG | - | chr1_1:16213074-16213093 | None:intergenic | 30.0% | |
| GGGTTTAAAAGATGAATTGT+TGG | - | chr1_1:16213081-16213100 | None:intergenic | 30.0% | |
| !! | AAGTGACACTCATTTTGAAA+CGG | + | chr1_1:16213443-16213462 | Msa0010710:intron | 30.0% |
| !!! | TCTCATAGTTTTAATGGTTG+TGG | - | chr1_1:16213485-16213504 | None:intergenic | 30.0% |
| TAAAACTATGAGAAACAAGC+TGG | + | chr1_1:16213492-16213511 | Msa0010710:intron | 30.0% | |
| !! | TAAGAGTGTTGTTTCTTTGT+CGG | - | chr1_1:16213546-16213565 | None:intergenic | 30.0% |
| AGTAAAACAAAACTACCCTT+TGG | + | chr1_1:16213574-16213593 | Msa0010710:intron | 30.0% | |
| !!! | TGTTGTTTTATTCAGTGTGT+TGG | - | chr1_1:16213636-16213655 | None:intergenic | 30.0% |
| AACACACTGAATAAAACAAC+AGG | + | chr1_1:16213635-16213654 | Msa0010710:intron | 30.0% | |
| !! | AATTTTGACAAACCCATAAG+CGG | - | chr1_1:16213844-16213863 | None:intergenic | 30.0% |
| ACGAGTTTAAATCAAAATGG+GGG | + | chr1_1:16213975-16213994 | Msa0010710:intron | 30.0% | |
| TTAAATCAAAATGGGGGATT+AGG | + | chr1_1:16213981-16214000 | Msa0010710:intron | 30.0% | |
| TAAATCAAAATGGGGGATTA+GGG | + | chr1_1:16213982-16214001 | Msa0010710:intron | 30.0% | |
| ATATTGAGAGAAAATTGTCG+TGG | - | chr1_1:16214091-16214110 | None:intergenic | 30.0% | |
| !!! | TTTGAGTTTTGTTGGATTTG+AGG | + | chr1_1:16214190-16214209 | Msa0010710:CDS | 30.0% |
| !!! | TTGAGTTTTGTTGGATTTGA+GGG | + | chr1_1:16214191-16214210 | Msa0010710:CDS | 30.0% |
| ATTAGGGGTCGTTTAAAAAT+TGG | - | chr1_1:16214514-16214533 | None:intergenic | 30.0% | |
| TATTTCATCCTTGCAATTAG+GGG | - | chr1_1:16214529-16214548 | None:intergenic | 30.0% | |
| GTATTTCATCCTTGCAATTA+GGG | - | chr1_1:16214530-16214549 | None:intergenic | 30.0% | |
| TGTATTTCATCCTTGCAATT+AGG | - | chr1_1:16214531-16214550 | None:intergenic | 30.0% | |
| !!! | GCATCGTCATTTTTAACTTA+AGG | - | chr1_1:16214562-16214581 | None:intergenic | 30.0% |
| !! | GAAAAACAAGTATCGAAGTT+TGG | + | chr1_1:16214624-16214643 | Msa0010710:intron | 30.0% |
| TATTGTGGTACTCTTAGAAT+AGG | - | chr1_1:16214875-16214894 | None:intergenic | 30.0% | |
| TTTATGGGCCATTAAAGATT+TGG | - | chr1_1:16215157-16215176 | None:intergenic | 30.0% | |
| TTGTTACTACACACTATCTT+GGG | + | chr1_1:16215182-16215201 | Msa0010710:intron | 30.0% | |
| CAACAAAGACAATATCAATG+TGG | - | chr1_1:16215256-16215275 | None:intergenic | 30.0% | |
| CACATTGATATTGTCTTTGT+TGG | + | chr1_1:16215254-16215273 | Msa0010710:intron | 30.0% | |
| TTGATATTGTCTTTGTTGGA+TGG | + | chr1_1:16215258-16215277 | Msa0010710:intron | 30.0% | |
| AAGGGTTGAATATGAGTAAA+GGG | - | chr1_1:16215329-16215348 | None:intergenic | 30.0% | |
| TAAGGGTTGAATATGAGTAA+AGG | - | chr1_1:16215330-16215349 | None:intergenic | 30.0% | |
| !! | GTCATGATTTATTGAGTTGA+TGG | + | chr1_1:16215928-16215947 | Msa0010710:intron | 30.0% |
| !!! | TATTGAGTTGATGGTGATTT+TGG | + | chr1_1:16215937-16215956 | Msa0010710:intron | 30.0% |
| ! | TTTTGTGATTTTCTTCCTTG+CGG | + | chr1_1:16216078-16216097 | Msa0010710:intron | 30.0% |
| TGCGGCTATTAAAAAAACAT+AGG | + | chr1_1:16216111-16216130 | Msa0010710:intron | 30.0% | |
| GGTTTGACTACTATGTTATT+TGG | + | chr1_1:16216301-16216320 | Msa0010710:CDS | 30.0% | |
| ! | TTGACTACTATGTTATTTGG+TGG | + | chr1_1:16216304-16216323 | Msa0010710:CDS | 30.0% |
| !!! | AGTTACCAGTTGTTTTTCAA+AGG | + | chr1_1:16216472-16216491 | Msa0010710:intron | 30.0% |
| ! | AACAACCTTTGAAAAACAAC+TGG | - | chr1_1:16216480-16216499 | None:intergenic | 30.0% |
| !!! | AGTTGTTTTTCAAAGGTTGT+TGG | + | chr1_1:16216479-16216498 | Msa0010710:intron | 30.0% |
| TACCAGGATTAACGAATACA+AGG | - | chr1_1:16212878-16212897 | None:intergenic | 35.0% | |
| TGGTAGAGATGAAGATCAAA+GGG | - | chr1_1:16213054-16213073 | None:intergenic | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr1_1:16213407-16213426 | None:intergenic | 35.0% |
| !! | TTCAAAATGAGTGTCGCTTT+AGG | + | chr1_1:16213208-16213227 | Msa0010710:intron | 35.0% |
| !! | AAGAGTGTTGTTTCTTTGTC+GGG | - | chr1_1:16213545-16213564 | None:intergenic | 35.0% |
| AAAACAACAGGAAAGACACA+AGG | + | chr1_1:16213647-16213666 | Msa0010710:intron | 35.0% | |
| GAAAATGATGTTGTCTCACA+TGG | + | chr1_1:16213674-16213693 | Msa0010710:intron | 35.0% | |
| ! | AAAATTTGTTCCCTCGCTTA+TGG | + | chr1_1:16213858-16213877 | Msa0010710:intron | 35.0% |
| ! | AAATTTGTTCCCTCGCTTAT+GGG | + | chr1_1:16213859-16213878 | Msa0010710:intron | 35.0% |
| CATCCAAAACATTGGAAGAA+GGG | - | chr1_1:16213898-16213917 | None:intergenic | 35.0% | |
| ACATCCAAAACATTGGAAGA+AGG | - | chr1_1:16213899-16213918 | None:intergenic | 35.0% | |
| !! | ACATTGGCTCAAGATTTCAA+TGG | - | chr1_1:16213927-16213946 | None:intergenic | 35.0% |
| GAAATCTTGAGCCAATGTTT+CGG | + | chr1_1:16213929-16213948 | Msa0010710:intron | 35.0% | |
| TTCTCAAACTTCCGAAACAT+TGG | - | chr1_1:16213943-16213962 | None:intergenic | 35.0% | |
| AGCCTTAGAGATGAAGATTA+AGG | + | chr1_1:16214299-16214318 | Msa0010710:intron | 35.0% | |
| GCCTTAGAGATGAAGATTAA+GGG | + | chr1_1:16214300-16214319 | Msa0010710:intron | 35.0% | |
| ACCCTTAATCTTCATCTCTA+AGG | - | chr1_1:16214304-16214323 | None:intergenic | 35.0% | |
| TAATGGAACAAATGGAGAGA+AGG | + | chr1_1:16214779-16214798 | Msa0010710:intron | 35.0% | |
| GTCCTCATTTGATAAATGAC+AGG | - | chr1_1:16214840-16214859 | None:intergenic | 35.0% | |
| TTGCAATAGTTGGCATATTG+TGG | - | chr1_1:16214890-16214909 | None:intergenic | 35.0% | |
| ACAATATGCCAACTATTGCA+AGG | + | chr1_1:16214889-16214908 | Msa0010710:intron | 35.0% | |
| ATTGCAAGGCTATCCTTTAT+AGG | + | chr1_1:16214903-16214922 | Msa0010710:intron | 35.0% | |
| TTGCAAGGCTATCCTTTATA+GGG | + | chr1_1:16214904-16214923 | Msa0010710:intron | 35.0% | |
| CTTGTTACTACACACTATCT+TGG | + | chr1_1:16215181-16215200 | Msa0010710:intron | 35.0% | |
| CAATATCAATGTGGGAGTTT+CGG | - | chr1_1:16215247-16215266 | None:intergenic | 35.0% | |
| TGCAAATGCAGTACTCATAA+GGG | - | chr1_1:16215347-16215366 | None:intergenic | 35.0% | |
| ATGCAAATGCAGTACTCATA+AGG | - | chr1_1:16215348-16215367 | None:intergenic | 35.0% | |
| ACACACACGATTAACTCAAT+AGG | + | chr1_1:16215593-16215612 | Msa0010710:intron | 35.0% | |
| ! | TTTTTAATGAGCAAATGGGG+TGG | + | chr1_1:16215747-16215766 | Msa0010710:intron | 35.0% |
| !!! | GTTTTTGGTGAAGTTTCGAA+TGG | + | chr1_1:16215820-16215839 | Msa0010710:CDS | 35.0% |
| CATTGTCTCTTACTTGTGTT+CGG | + | chr1_1:16215994-16216013 | Msa0010710:CDS | 35.0% | |
| ATTGTCTCTTACTTGTGTTC+GGG | + | chr1_1:16215995-16216014 | Msa0010710:CDS | 35.0% | |
| ! | TTTGTGATTTTCTTCCTTGC+GGG | + | chr1_1:16216079-16216098 | Msa0010710:intron | 35.0% |
| TCGATCAGAACTTTCTCATT+CGG | + | chr1_1:16216280-16216299 | Msa0010710:CDS | 35.0% | |
| ! | TATTTGGTGGTTTGTCTATG+TGG | + | chr1_1:16216317-16216336 | Msa0010710:CDS | 35.0% |
| ! | ATCGATTGTTGTTATGACGA+AGG | + | chr1_1:16216424-16216443 | Msa0010710:intron | 35.0% |
| CGTAAAGTAGCAACATACAA+AGG | - | chr1_1:16216655-16216674 | None:intergenic | 35.0% | |
| !! | ATGACTAAGAGCATCCACAA+TGG | - | chr1_1:16212718-16212737 | None:intergenic | 40.0% |
| GTCCTTGTATTCGTTAATCC+TGG | + | chr1_1:16212873-16212892 | Msa0010710:intron | 40.0% | |
| TGATTAATTGGGCTTAGGGA+CGG | - | chr1_1:16212934-16212953 | None:intergenic | 40.0% | |
| GCAGTGATTAATTGGGCTTA+GGG | - | chr1_1:16212938-16212957 | None:intergenic | 40.0% | |
| TGACGTGGCAGTGATTAATT+GGG | - | chr1_1:16212945-16212964 | None:intergenic | 40.0% | |
| GTTCAAGCCAAAATCTGTTG+AGG | - | chr1_1:16214373-16214392 | None:intergenic | 40.0% | |
| GTGGTAGAGATGAAGATCAA+AGG | - | chr1_1:16213055-16213074 | None:intergenic | 40.0% | |
| !! | AACGGAGGGAGTACTTATTA+AGG | - | chr1_1:16213189-16213208 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr1_1:16213447-16213466 | None:intergenic | 40.0% |
| ! | ATACTTTGGAAGTAGTGTGC+AGG | + | chr1_1:16213328-16213347 | Msa0010710:intron | 40.0% |
| ! | TACTTTGGAAGTAGTGTGCA+GGG | + | chr1_1:16213329-16213348 | Msa0010710:intron | 40.0% |
| ! | GTAGTGTGCAGGGTATTAAT+TGG | + | chr1_1:16213339-16213358 | Msa0010710:intron | 40.0% |
| ! | TGTGCAGGGTATTAATTGGA+GGG | + | chr1_1:16213343-16213362 | Msa0010710:intron | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | + | chr1_1:16213446-16213465 | Msa0010710:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr1_1:16213447-16213466 | Msa0010710:intron | 40.0% |
| TGTAGAGATTGTTGGCCAAA+GGG | - | chr1_1:16213592-16213611 | None:intergenic | 40.0% | |
| TTTGGCCAACAATCTCTACA+GGG | + | chr1_1:16213592-16213611 | Msa0010710:intron | 40.0% | |
| !!! | CAGTGTGTTGGTTTTGTGTA+GGG | - | chr1_1:16213624-16213643 | None:intergenic | 40.0% |
| !!! | TCAGTGTGTTGGTTTTGTGT+AGG | - | chr1_1:16213625-16213644 | None:intergenic | 40.0% |
| GGAACGATTGAAGGTAAGAA+TGG | - | chr1_1:16213817-16213836 | None:intergenic | 40.0% | |
| ACAAATGAACCCATAAGCGA+GGG | - | chr1_1:16213871-16213890 | None:intergenic | 40.0% | |
| AACAAATGAACCCATAAGCG+AGG | - | chr1_1:16213872-16213891 | None:intergenic | 40.0% | |
| ! | TCTCCCTTCTTCCAATGTTT+TGG | + | chr1_1:16213892-16213911 | Msa0010710:intron | 40.0% |
| GGCTCAAACATCCAAAACAT+TGG | - | chr1_1:16213906-16213925 | None:intergenic | 40.0% | |
| ! | TTTTGTTGGATTTGAGGGCT+GGG | + | chr1_1:16214196-16214215 | Msa0010710:CDS | 40.0% |
| ! | CAGTCTGACTCAACAGATTT+TGG | - | chr1_1:16214383-16214402 | None:intergenic | 40.0% |
| TTAAACGACCCCTAATTGCA+AGG | + | chr1_1:16214518-16214537 | Msa0010710:intron | 40.0% | |
| ! | GGCCTGTCATTTATCAAATG+AGG | + | chr1_1:16214835-16214854 | Msa0010710:intron | 40.0% |
| ! | AAGGATAGCCTTGCAATAGT+TGG | - | chr1_1:16214900-16214919 | None:intergenic | 40.0% |
| CTGATCGTTTCATCGTGATT+AGG | - | chr1_1:16215377-16215396 | None:intergenic | 40.0% | |
| CTAATCACGATGAAACGATC+AGG | + | chr1_1:16215375-16215394 | Msa0010710:intron | 40.0% | |
| !! | TTGGAGTTATGGGCTGTTTT+TGG | + | chr1_1:16215805-16215824 | Msa0010710:CDS | 40.0% |
| !!! | TGAGTTGATGGTGATTTTGG+TGG | + | chr1_1:16215940-16215959 | Msa0010710:intron | 40.0% |
| !! | ATGGTGATTTTGGTGGTTGT+TGG | + | chr1_1:16215947-16215966 | Msa0010710:intron | 40.0% |
| TTGTCTCTTACTTGTGTTCG+GGG | + | chr1_1:16215996-16216015 | Msa0010710:CDS | 40.0% | |
| !!! | GGATGTTTGGTGTTTTTGTG+TGG | + | chr1_1:16216132-16216151 | Msa0010710:intron | 40.0% |
| !!! | TGTTTGGTGTTTTTGTGTGG+TGG | + | chr1_1:16216135-16216154 | Msa0010710:intron | 40.0% |
| CCATATAGGTCTAGATCAGA+AGG | - | chr1_1:16216167-16216186 | None:intergenic | 40.0% | |
| CCTTCTGATCTAGACCTATA+TGG | + | chr1_1:16216164-16216183 | Msa0010710:intron | 40.0% | |
| TCTGATCTAGACCTATATGG+AGG | + | chr1_1:16216167-16216186 | Msa0010710:intron | 40.0% | |
| ! | GGTTGTTGTTGTTGTTGCAA+AGG | + | chr1_1:16216384-16216403 | Msa0010710:CDS | 40.0% |
| GTTGCAAAGGTGATTCGTTA+AGG | + | chr1_1:16216397-16216416 | Msa0010710:intron | 40.0% | |
| ! | GATTGTTGTTATGACGAAGG+TGG | + | chr1_1:16216427-16216446 | Msa0010710:intron | 40.0% |
| ! | AAAGGTTGTTGGTTGTGTGT+TGG | + | chr1_1:16216490-16216509 | Msa0010710:intron | 40.0% |
| TGGTTCTTGACGTTGTTGAT+TGG | + | chr1_1:16216510-16216529 | Msa0010710:CDS | 40.0% | |
| ! | GGTTCTTGACGTTGTTGATT+GGG | + | chr1_1:16216511-16216530 | Msa0010710:CDS | 40.0% |
| ! | GTTCTTGACGTTGTTGATTG+GGG | + | chr1_1:16216512-16216531 | Msa0010710:CDS | 40.0% |
| !!! | GGTGGTGGAATTTGATTTTG+TGG | + | chr1_1:16216558-16216577 | Msa0010710:CDS | 40.0% |
| GTGGATGCTCTTAGTCATGA+TGG | + | chr1_1:16212720-16212739 | Msa0010710:CDS | 45.0% | |
| ATTGCAGTTGGAGGAGAATG+AGG | + | chr1_1:16212786-16212805 | Msa0010710:intron | 45.0% | |
| GTGTTTCGTCCCTGCAATTA+AGG | + | chr1_1:16212835-16212854 | Msa0010710:intron | 45.0% | |
| ! | TTTTGCAGGGGCAAAATACC+AGG | - | chr1_1:16212894-16212913 | None:intergenic | 45.0% |
| GGCAGTGATTAATTGGGCTT+AGG | - | chr1_1:16212939-16212958 | None:intergenic | 45.0% | |
| CTGACGTGGCAGTGATTAAT+TGG | - | chr1_1:16212946-16212965 | None:intergenic | 45.0% | |
| ! | CAGTCTGCCTCAACAGATTT+TGG | + | chr1_1:16212971-16212990 | Msa0010710:intron | 45.0% |
| ACAGACGAAAATACCCCTGA+AGG | + | chr1_1:16212999-16213018 | Msa0010710:intron | 45.0% | |
| GAAAATACCCCTGAAGGTCT+TGG | + | chr1_1:16213005-16213024 | Msa0010710:intron | 45.0% | |
| !! | GAGGGAGTACTTATTAAGGC+TGG | - | chr1_1:16213185-16213204 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr1_1:16213204-16213223 | None:intergenic | 45.0% |
| ! | GTGTGCAGGGTATTAATTGG+AGG | + | chr1_1:16213342-16213361 | Msa0010710:intron | 45.0% |
| ATGAGAAACAAGCTGGCAAG+AGG | + | chr1_1:16213499-16213518 | Msa0010710:intron | 45.0% | |
| CTGTAGAGATTGTTGGCCAA+AGG | - | chr1_1:16213593-16213612 | None:intergenic | 45.0% | |
| CTTTGGCCAACAATCTCTAC+AGG | + | chr1_1:16213591-16213610 | Msa0010710:intron | 45.0% | |
| ACAACAGGAAAGACACAAGG+AGG | + | chr1_1:16213650-16213669 | Msa0010710:intron | 45.0% | |
| AATCGTTCCAGATCCGCTTA+TGG | + | chr1_1:16213828-16213847 | Msa0010710:intron | 45.0% | |
| ATCGTTCCAGATCCGCTTAT+GGG | + | chr1_1:16213829-16213848 | Msa0010710:intron | 45.0% | |
| GAAGAAGAACGAAGAGAGCA+TGG | + | chr1_1:16214037-16214056 | Msa0010710:intron | 45.0% | |
| !! | GTTTTGTTGGATTTGAGGGC+TGG | + | chr1_1:16214195-16214214 | Msa0010710:CDS | 45.0% |
| TGGGTTTCACAGGTTGTTCA+TGG | + | chr1_1:16214215-16214234 | Msa0010710:CDS | 45.0% | |
| GTTTCACAGGTTGTTCATGG+TGG | + | chr1_1:16214218-16214237 | Msa0010710:CDS | 45.0% | |
| ! | TGGGTTTCACGGTTTGTTCA+TGG | + | chr1_1:16214246-16214265 | Msa0010710:intron | 45.0% |
| ! | GTTTCACGGTTTGTTCATGG+TGG | + | chr1_1:16214249-16214268 | Msa0010710:intron | 45.0% |
| ACAGACGTAAATACCCCTGA+GGG | - | chr1_1:16214355-16214374 | None:intergenic | 45.0% | |
| AACAGACGTAAATACCCCTG+AGG | - | chr1_1:16214356-16214375 | None:intergenic | 45.0% | |
| GCGGTAATTAACTGAGCTCA+TGG | + | chr1_1:16214427-16214446 | Msa0010710:intron | 45.0% | |
| !! | CTTTGAGAGGCTAGTTTGCA+AGG | + | chr1_1:16214471-16214490 | Msa0010710:intron | 45.0% |
| TTTCGAATGGACGTGGTGAA+GGG | + | chr1_1:16215833-16215852 | Msa0010710:CDS | 45.0% | |
| !! | GTGGTTGTTGGTGTTGAGTT+GGG | + | chr1_1:16215959-16215978 | Msa0010710:intron | 45.0% |
| TGTCTCTTACTTGTGTTCGG+GGG | + | chr1_1:16215997-16216016 | Msa0010710:CDS | 45.0% | |
| ! | CTTGTGGGTTGTGTTGTGTT+GGG | + | chr1_1:16216053-16216072 | Msa0010710:CDS | 45.0% |
| ! | TTGTGGGTTGTGTTGTGTTG+GGG | + | chr1_1:16216054-16216073 | Msa0010710:CDS | 45.0% |
| GATCTAGACCTATATGGAGG+AGG | + | chr1_1:16216170-16216189 | Msa0010710:intron | 45.0% | |
| GGTTTGTCTATGTGGATCGA+TGG | + | chr1_1:16216325-16216344 | Msa0010710:CDS | 45.0% | |
| AACAAGCTGGCAAGAGGAGT+AGG | + | chr1_1:16213505-16213524 | Msa0010710:intron | 50.0% | |
| CTCGTCCCTGTAGAGATTGT+TGG | - | chr1_1:16213600-16213619 | None:intergenic | 50.0% | |
| ! | AGCGGATCTGGAACGATTGA+AGG | - | chr1_1:16213826-16213845 | None:intergenic | 50.0% |
| GACAAACCCATAAGCGGATC+TGG | - | chr1_1:16213838-16213857 | None:intergenic | 50.0% | |
| ATTTGAGGGCTGGGTTTCAC+AGG | + | chr1_1:16214205-16214224 | Msa0010710:CDS | 50.0% | |
| TCACAGGTTGTTCATGGTGG+AGG | + | chr1_1:16214221-16214240 | Msa0010710:CDS | 50.0% | |
| ! | CACAGGTTGTTCATGGTGGA+GGG | + | chr1_1:16214222-16214241 | Msa0010710:CDS | 50.0% |
| ! | GTTGTTCATGGTGGAGGGTT+GGG | + | chr1_1:16214227-16214246 | Msa0010710:CDS | 50.0% |
| TGCATTTGGCTAAGACCCTC+AGG | + | chr1_1:16214337-16214356 | Msa0010710:intron | 50.0% | |
| GCATTTGGCTAAGACCCTCA+GGG | + | chr1_1:16214338-16214357 | Msa0010710:intron | 50.0% | |
| CATTTGGCTAAGACCCTCAG+GGG | + | chr1_1:16214339-16214358 | Msa0010710:intron | 50.0% | |
| ! | ACGTCACTGATTAGCTGACG+TGG | - | chr1_1:16214406-16214425 | None:intergenic | 50.0% |
| ACGTCAGCTAATCAGTGACG+TGG | + | chr1_1:16214405-16214424 | Msa0010710:intron | 50.0% | |
| TCAGCTAATCAGTGACGTGG+CGG | + | chr1_1:16214408-16214427 | Msa0010710:intron | 50.0% | |
| !! | GGGAGCGTCACATATTTGTG+TGG | + | chr1_1:16215202-16215221 | Msa0010710:intron | 50.0% |
| GGTGAAGTTTCGAATGGACG+TGG | + | chr1_1:16215826-16215845 | Msa0010710:CDS | 50.0% | |
| GTTTCGAATGGACGTGGTGA+AGG | + | chr1_1:16215832-16215851 | Msa0010710:CDS | 50.0% | |
| CACTTGGACATCTCCCAAGA+CGG | - | chr1_1:16215869-16215888 | None:intergenic | 50.0% | |
| GTGTGGTGATCTCAGATCGA+AGG | + | chr1_1:16215906-16215925 | Msa0010710:CDS | 50.0% | |
| !! | GGTGGTTGTTGGTGTTGAGT+TGG | + | chr1_1:16215958-16215977 | Msa0010710:intron | 50.0% |
| !! | GTTGTTGGTGTTGAGTTGGG+AGG | + | chr1_1:16215962-16215981 | Msa0010710:intron | 50.0% |
| ! | GTGTGGCGATGATGATGATG+AGG | + | chr1_1:16216019-16216038 | Msa0010710:CDS | 50.0% |
| ! | TGGCGATGATGATGATGAGG+AGG | + | chr1_1:16216022-16216041 | Msa0010710:CDS | 50.0% |
| ! | CGATGATGATGATGAGGAGG+AGG | + | chr1_1:16216025-16216044 | Msa0010710:CDS | 50.0% |
| ! | TGATGATGATGAGGAGGAGG+AGG | + | chr1_1:16216028-16216047 | Msa0010710:CDS | 50.0% |
| ! | GCTTGTGGGTTGTGTTGTGT+TGG | + | chr1_1:16216052-16216071 | Msa0010710:CDS | 50.0% |
| ! | TGTGGGTTGTGTTGTGTTGG+GGG | + | chr1_1:16216055-16216074 | Msa0010710:CDS | 50.0% |
| GATGGTGTGATTGTGGTGTG+AGG | + | chr1_1:16216194-16216213 | Msa0010710:intron | 50.0% | |
| !! | GATGTAGGCCACGCTTTTTG+TGG | + | chr1_1:16216221-16216240 | Msa0010710:intron | 50.0% |
| TCCTCACACCACAAAAAGCG+TGG | - | chr1_1:16216232-16216251 | None:intergenic | 50.0% | |
| !! | ACGCTTTTTGTGGTGTGAGG+AGG | + | chr1_1:16216231-16216250 | Msa0010710:CDS | 50.0% |
| ! | TTTGTGGTGTGAGGAGGTGT+CGG | + | chr1_1:16216237-16216256 | Msa0010710:CDS | 50.0% |
| !! | AGGTGTCGGTGAGTCTTCAA+CGG | + | chr1_1:16216251-16216270 | Msa0010710:CDS | 50.0% |
| TCGGTGAGTCTTCAACGGTT+GGG | + | chr1_1:16216256-16216275 | Msa0010710:CDS | 50.0% | |
| !! | CGATGGTGTTGCTGTTGTGA+AGG | + | chr1_1:16216342-16216361 | Msa0010710:CDS | 50.0% |
| !! | TGGTGTTGCTGTTGTGAAGG+TGG | + | chr1_1:16216345-16216364 | Msa0010710:CDS | 50.0% |
| !!! | GGTGGATTTTGTTGTTGCGC+TGG | + | chr1_1:16216363-16216382 | Msa0010710:CDS | 50.0% |
| TTTGTGGCAGCTTGTGACGT+TGG | + | chr1_1:16216574-16216593 | Msa0010710:CDS | 50.0% | |
| ! | CAGCTTGTGACGTTGGTTGA+GGG | + | chr1_1:16216581-16216600 | Msa0010710:CDS | 50.0% |
| ! | GGCAGACTGATTAGCTGACG+TGG | - | chr1_1:16212960-16212979 | None:intergenic | 55.0% |
| CGTTTGGCCAAGACCTTCAG+GGG | - | chr1_1:16213015-16213034 | None:intergenic | 55.0% | |
| GCGTTTGGCCAAGACCTTCA+GGG | - | chr1_1:16213016-16213035 | None:intergenic | 55.0% | |
| TGCGTTTGGCCAAGACCTTC+AGG | - | chr1_1:16213017-16213036 | None:intergenic | 55.0% | |
| ! | GGTTGTTCATGGTGGAGGGT+TGG | + | chr1_1:16214226-16214245 | Msa0010710:CDS | 55.0% |
| TGGTGGAGGGTTGGGTTTCA+CGG | + | chr1_1:16214235-16214254 | Msa0010710:CDS | 55.0% | |
| AATGGACGTGGTGAAGGGAG+TGG | + | chr1_1:16215838-16215857 | Msa0010710:CDS | 55.0% | |
| CGTCTTGGGAGATGTCCAAG+TGG | + | chr1_1:16215867-16215886 | Msa0010710:CDS | 55.0% | |
| CTTGGGAGATGTCCAAGTGG+TGG | + | chr1_1:16215870-16215889 | Msa0010710:CDS | 55.0% | |
| CAGACTGCATCACCACCACT+TGG | - | chr1_1:16215885-16215904 | None:intergenic | 55.0% | |
| !! | GTTGGTGTTGAGTTGGGAGG+TGG | + | chr1_1:16215965-16215984 | Msa0010710:intron | 55.0% |
| CTTACTTGTGTTCGGGGGTG+TGG | + | chr1_1:16216002-16216021 | Msa0010710:CDS | 55.0% | |
| GACCTATATGGAGGAGGCGA+TGG | + | chr1_1:16216176-16216195 | Msa0010710:intron | 55.0% | |
| CACCATCGCCTCCTCCATAT+AGG | - | chr1_1:16216181-16216200 | None:intergenic | 55.0% | |
| AGGAGGCGATGGTGTGATTG+TGG | + | chr1_1:16216187-16216206 | Msa0010710:intron | 55.0% | |
| GGTGTGATTGTGGTGTGAGG+TGG | + | chr1_1:16216197-16216216 | Msa0010710:intron | 55.0% | |
| ! | GTGGTGTGAGGTGGTGATGT+AGG | + | chr1_1:16216206-16216225 | Msa0010710:intron | 55.0% |
| !! | GCCACGCTTTTTGTGGTGTG+AGG | + | chr1_1:16216228-16216247 | Msa0010710:CDS | 55.0% |
| GTCGGTGAGTCTTCAACGGT+TGG | + | chr1_1:16216255-16216274 | Msa0010710:CDS | 55.0% | |
| TTGGGGTTGTATGCGAGCAG+CGG | + | chr1_1:16216529-16216548 | Msa0010710:CDS | 55.0% | |
| GTATGCGAGCAGCGGAATGT+AGG | + | chr1_1:16216537-16216556 | Msa0010710:CDS | 55.0% | |
| ! | GCAGCTTGTGACGTTGGTTG+AGG | + | chr1_1:16216580-16216599 | Msa0010710:CDS | 55.0% |
| !! | AGGGAGTGGTGTTGCCGTCT+TGG | + | chr1_1:16215852-16215871 | Msa0010710:CDS | 60.0% |
| !! | GGGAGTGGTGTTGCCGTCTT+GGG | + | chr1_1:16215853-16215872 | Msa0010710:CDS | 60.0% |
| ! | GTGGTGATGCAGTCTGCGTG+TGG | + | chr1_1:16215889-16215908 | Msa0010710:CDS | 60.0% |
| TGAGGAGGAGGAGGAGCTTG+TGG | + | chr1_1:16216037-16216056 | Msa0010710:CDS | 60.0% | |
| GAGGAGGAGGAGGAGCTTGT+GGG | + | chr1_1:16216038-16216057 | Msa0010710:CDS | 60.0% | |
| !! | CCTTGCGGGTGCTGAGTTTG+CGG | + | chr1_1:16216093-16216112 | Msa0010710:intron | 60.0% |
| TGCGAGCAGCGGAATGTAGG+TGG | + | chr1_1:16216540-16216559 | Msa0010710:CDS | 60.0% | |
| GAGCAGCGGAATGTAGGTGG+TGG | + | chr1_1:16216543-16216562 | Msa0010710:CDS | 60.0% | |
| CCGCAAACTCAGCACCCGCA+AGG | - | chr1_1:16216096-16216115 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 16212705 | 16216682 | 16212705 | ID=Msa0010710;Name=Msa0010710 |
| chr1_1 | mRNA | 16212705 | 16216682 | 16212705 | ID=Msa0010710-mRNA-1;Parent=Msa0010710;Name=Msa0010710-mRNA-1;_AED=0.37;_eAED=0.45;_QI=0|0|0|0.66|1|1|6|0|239 |
| chr1_1 | exon | 16212705 | 16212741 | 16212705 | ID=Msa0010710-mRNA-1:exon:5920;Parent=Msa0010710-mRNA-1 |
| chr1_1 | exon | 16214189 | 16214256 | 16214189 | ID=Msa0010710-mRNA-1:exon:5921;Parent=Msa0010710-mRNA-1 |
| chr1_1 | exon | 16215778 | 16215927 | 16215778 | ID=Msa0010710-mRNA-1:exon:5922;Parent=Msa0010710-mRNA-1 |
| chr1_1 | exon | 16215984 | 16216081 | 16215984 | ID=Msa0010710-mRNA-1:exon:5923;Parent=Msa0010710-mRNA-1 |
| chr1_1 | exon | 16216228 | 16216405 | 16216228 | ID=Msa0010710-mRNA-1:exon:5924;Parent=Msa0010710-mRNA-1 |
| chr1_1 | exon | 16216494 | 16216682 | 16216494 | ID=Msa0010710-mRNA-1:exon:5925;Parent=Msa0010710-mRNA-1 |
| chr1_1 | CDS | 16212705 | 16212741 | 16212705 | ID=Msa0010710-mRNA-1:cds;Parent=Msa0010710-mRNA-1 |
| chr1_1 | CDS | 16214189 | 16214256 | 16214189 | ID=Msa0010710-mRNA-1:cds;Parent=Msa0010710-mRNA-1 |
| chr1_1 | CDS | 16215778 | 16215927 | 16215778 | ID=Msa0010710-mRNA-1:cds;Parent=Msa0010710-mRNA-1 |
| chr1_1 | CDS | 16215984 | 16216081 | 16215984 | ID=Msa0010710-mRNA-1:cds;Parent=Msa0010710-mRNA-1 |
| chr1_1 | CDS | 16216228 | 16216405 | 16216228 | ID=Msa0010710-mRNA-1:cds;Parent=Msa0010710-mRNA-1 |
| chr1_1 | CDS | 16216494 | 16216682 | 16216494 | ID=Msa0010710-mRNA-1:cds;Parent=Msa0010710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
