AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0055440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055440 MtrunA17_Chr1g0148811 96.770 1424 45 1 1 1423 1 1424 0.0 2858
Msa0055440 MtrunA17_Chr1g0148841 80.517 1432 267 2 4 1423 16 1447 0.0 2431
Msa0055440 MtrunA17_Chr3g0138261 66.388 1434 457 5 6 1423 16 1440 0.0 1998
Msa0055440 MtrunA17_Chr2g0332221 64.817 1424 486 6 3 1423 16 1427 0.0 1981
Msa0055440 MtrunA17_Chr4g0003981 65.577 1438 463 4 1 1423 17 1437 0.0 1978
Msa0055440 MtrunA17_Chr2g0332241 64.817 1424 487 6 3 1423 16 1428 0.0 1977
Msa0055440 MtrunA17_Chr2g0332211 64.256 1424 497 5 3 1423 97 1511 0.0 1965
Msa0055440 MtrunA17_Chr7g0262231 63.278 1446 502 7 6 1423 12 1456 0.0 1950
Msa0055440 MtrunA17_Chr7g0262241 63.757 1432 496 6 15 1423 22 1453 0.0 1939
Msa0055440 MtrunA17_Chr7g0261951 63.428 1441 504 5 6 1423 12 1452 0.0 1914
Msa0055440 MtrunA17_Chr7g0261971 63.012 1441 510 4 6 1423 8 1448 0.0 1908
Msa0055440 MtrunA17_Chr4g0003971 64.106 1432 469 7 1 1423 1 1396 0.0 1899
Msa0055440 MtrunA17_Chr7g0261981 61.798 1424 513 4 5 1423 11 1408 0.0 1890
Msa0055440 MtrunA17_Chr7g0262221 61.050 1466 487 9 4 1423 11 1438 0.0 1873
Msa0055440 MtrunA17_Chr7g0262261 59.944 1418 522 4 21 1423 2 1388 0.0 1774
Msa0055440 MtrunA17_Chr7g0262261 50.000 90 42 1 1337 1423 1535 1624 2.52e-23 108
Msa0055440 MtrunA17_Chr7g0265981 59.018 1425 563 7 15 1423 38 1457 0.0 1760
Msa0055440 MtrunA17_Chr1g0171351 57.851 1433 576 9 18 1423 37 1468 0.0 1741
Msa0055440 MtrunA17_Chr7g0262251 58.994 1412 508 8 15 1405 35 1396 0.0 1739
Msa0055440 MtrunA17_Chr7g0265971 57.748 1439 571 9 15 1423 32 1463 0.0 1736
Msa0055440 MtrunA17_Chr4g0004021 66.562 1268 394 5 1 1255 15 1265 0.0 1734
Msa0055440 MtrunA17_Chr4g0004021 22.242 571 375 15 848 1365 166 720 1.28e-29 128
Msa0055440 MtrunA17_Chr1g0198291 57.354 1421 590 6 18 1423 49 1468 0.0 1715
Msa0055440 MtrunA17_Chr4g0062871 55.742 1428 605 8 11 1423 3 1418 0.0 1653
Msa0055440 MtrunA17_Chr2g0331081 54.913 1435 614 7 20 1423 34 1466 0.0 1625
Msa0055440 MtrunA17_Chr8g0340651 53.591 1448 627 8 20 1423 34 1480 0.0 1593
Msa0055440 MtrunA17_Chr7g0265961 54.654 1429 571 7 4 1423 28 1388 0.0 1585
Msa0055440 MtrunA17_Chr0c20g0493841 52.152 1417 651 11 23 1423 26 1431 0.0 1499
Msa0055440 MtrunA17_Chr3g0104621 51.520 1349 629 7 99 1423 1 1348 0.0 1406
Msa0055440 MtrunA17_Chr5g0429871 52.818 1242 562 7 193 1423 17 1245 0.0 1357
Msa0055440 MtrunA17_Chr5g0429871 23.038 586 386 15 129 702 646 1178 6.23e-30 129
Msa0055440 MtrunA17_Chr7g0262321 56.636 1183 444 11 255 1423 4 1131 0.0 1313
Msa0055440 MtrunA17_Chr7g0262321 23.726 569 361 16 150 705 564 1072 4.29e-25 113
Msa0055440 MtrunA17_Chr4g0069211 51.823 1042 460 12 23 1048 26 1041 0.0 1046
Msa0055440 MtrunA17_Chr4g0069211 23.592 568 359 16 848 1365 162 704 1.52e-33 141
Msa0055440 MtrunA17_Chr7g0266001 58.271 671 273 2 97 762 6 674 0.0 837
Msa0055440 MtrunA17_Chr7g0266001 24.493 641 408 20 840 1419 49 674 1.83e-35 145
Msa0055440 MtrunA17_Chr7g0265991 60.377 636 235 3 805 1423 9 644 0.0 814
Msa0055440 MtrunA17_Chr7g0265991 23.656 651 403 19 149 766 54 643 3.05e-36 147
Msa0055440 MtrunA17_Chr7g0215001 64.096 376 113 1 1001 1354 1 376 5.71e-174 523
Msa0055440 MtrunA17_Chr7g0215001 22.084 403 241 17 334 691 1 375 4.17e-12 69.7
Msa0055440 MtrunA17_Chr4g0069221 49.468 376 187 1 1051 1423 1 376 2.03e-130 408
Msa0055440 MtrunA17_Chr6g0472481 73.279 247 54 1 841 1075 1 247 9.94e-120 374
Msa0055440 MtrunA17_Chr6g0472481 27.698 278 141 9 149 404 8 247 1.11e-15 79.0
Msa0055440 MtrunA17_Chr4g0004001 61.494 174 66 1 1251 1423 15 188 7.76e-75 246
Msa0055440 MtrunA17_Chr7g0238421 48.462 260 93 4 861 1120 12 230 9.35e-66 222
Msa0055440 MtrunA17_Chr1g0176441 28.188 596 366 15 820 1379 143 712 3.77e-59 218
Msa0055440 MtrunA17_Chr1g0176441 26.094 594 365 19 109 675 127 673 1.10e-36 149
Msa0055440 MtrunA17_Chr1g0198931 27.414 642 405 16 771 1368 2 626 1.03e-57 213
Msa0055440 MtrunA17_Chr1g0198931 26.850 581 333 22 154 702 107 627 6.92e-39 155
Msa0055440 MtrunA17_Chr1g0176451 28.157 586 362 17 826 1380 1 558 5.09e-56 206
Msa0055440 MtrunA17_Chr1g0176451 26.433 541 334 13 154 675 23 518 2.54e-39 155
Msa0055440 MtrunA17_Chr2g0316301 28.624 545 354 12 853 1383 73 596 2.66e-54 201
Msa0055440 MtrunA17_Chr2g0316301 24.960 625 372 17 154 753 73 625 9.95e-38 151
Msa0055440 MtrunA17_Chr7g0262331 49.282 209 99 5 23 226 2 208 1.34e-53 186
Msa0055440 MtrunA17_Chr1g0208391 25.724 587 387 13 799 1365 49 606 1.19e-52 198
Msa0055440 MtrunA17_Chr1g0208391 27.003 574 353 15 147 705 86 608 2.74e-40 160
Msa0055440 MtrunA17_Chr4g0050221 28.864 537 348 12 848 1365 26 547 2.76e-51 192
Msa0055440 MtrunA17_Chr4g0050221 23.983 688 424 20 141 802 17 631 3.77e-34 140
Msa0055440 MtrunA17_Chr8g0390471 80.808 99 19 0 853 951 5 103 1.69e-50 174
Msa0055440 MtrunA17_Chr1g0200651 23.859 679 442 14 782 1411 3 655 9.52e-50 189
Msa0055440 MtrunA17_Chr1g0200651 26.643 563 342 17 134 675 67 579 2.86e-37 150
Msa0055440 MtrunA17_Chr7g0263351 25.517 580 387 8 823 1365 82 653 1.79e-49 189
Msa0055440 MtrunA17_Chr7g0263351 23.468 669 416 15 145 760 118 743 1.49e-34 143
Msa0055440 MtrunA17_Chr7g0267971 27.049 610 396 14 800 1379 111 701 2.33e-49 188
Msa0055440 MtrunA17_Chr7g0267971 25.408 551 334 18 154 675 160 662 1.87e-31 133
Msa0055440 MtrunA17_Chr8g0359931 27.648 557 375 12 823 1368 34 573 3.09e-49 186
Msa0055440 MtrunA17_Chr8g0359931 28.102 548 315 21 154 684 66 551 1.80e-40 160
Msa0055440 MtrunA17_Chr4g0039261 28.275 626 389 18 154 760 51 635 3.82e-49 187
Msa0055440 MtrunA17_Chr4g0039261 26.372 656 414 20 801 1413 6 635 7.45e-46 177
Msa0055440 MtrunA17_Chr1g0213091 23.510 621 404 12 815 1378 65 671 7.08e-49 187
Msa0055440 MtrunA17_Chr1g0213091 22.896 594 357 11 154 703 122 658 1.19e-36 149
Msa0055440 MtrunA17_Chr4g0050251 25.953 551 372 12 853 1382 73 608 2.36e-48 185
Msa0055440 MtrunA17_Chr4g0050251 25.081 618 400 15 154 754 73 644 3.38e-41 163
Msa0055440 MtrunA17_Chr4g0039251 28.832 548 325 13 852 1359 92 614 3.72e-48 185
Msa0055440 MtrunA17_Chr4g0039251 27.149 663 401 25 148 779 89 700 2.33e-43 170
Msa0055440 MtrunA17_Chr5g0408061 28.653 527 313 16 781 1279 7 498 4.26e-48 183
Msa0055440 MtrunA17_Chr5g0408061 27.562 566 318 18 149 684 60 563 1.04e-40 160
Msa0055440 MtrunA17_Chr4g0050291 26.198 626 393 15 154 758 50 627 1.86e-45 176
Msa0055440 MtrunA17_Chr4g0050291 25.229 654 413 22 799 1410 7 626 1.31e-43 170
Msa0055440 MtrunA17_Chr3g0102731 27.057 547 351 13 823 1335 54 586 3.46e-45 173
Msa0055440 MtrunA17_Chr3g0102731 31.752 274 150 7 153 425 97 334 1.25e-30 129
Msa0055440 MtrunA17_Chr5g0446901 26.486 555 355 14 820 1335 61 601 3.54e-45 174
Msa0055440 MtrunA17_Chr5g0446901 31.159 276 151 8 154 425 109 349 1.79e-29 125
Msa0055440 MtrunA17_Chr6g0477811 26.850 581 358 17 826 1372 47 594 3.72e-45 175
Msa0055440 MtrunA17_Chr6g0477811 27.160 486 298 13 153 623 65 509 2.31e-43 169
Msa0055440 MtrunA17_Chr1g0202431 27.119 531 334 20 853 1366 50 544 2.24e-44 171
Msa0055440 MtrunA17_Chr1g0202431 23.684 646 404 17 140 766 29 604 2.18e-36 147
Msa0055440 MtrunA17_Chr1g0199471 26.257 537 311 13 785 1273 467 966 4.38e-44 175
Msa0055440 MtrunA17_Chr1g0199471 32.222 270 145 8 153 419 516 750 1.01e-29 129
Msa0055440 MtrunA17_Chr4g0050261 24.068 590 375 16 853 1382 73 649 7.82e-44 172
Msa0055440 MtrunA17_Chr4g0050261 24.394 660 401 21 154 758 73 689 1.20e-36 149
Msa0055440 MtrunA17_Chr2g0318061 34.520 281 166 7 824 1099 1 268 4.88e-42 159
Msa0055440 MtrunA17_Chr2g0318061 35.531 273 139 9 154 425 31 267 9.98e-37 143
Msa0055440 MtrunA17_Chr8g0384391 22.913 563 377 12 844 1373 48 586 8.87e-42 164
Msa0055440 MtrunA17_Chr8g0384391 23.160 652 386 17 153 760 55 635 1.20e-39 157
Msa0055440 MtrunA17_Chr1g0180971 36.290 248 152 3 849 1096 409 650 1.14e-41 165
Msa0055440 MtrunA17_Chr1g0180971 31.884 276 152 8 150 423 409 650 3.18e-29 126
Msa0055440 MtrunA17_Chr4g0065231 25.045 555 381 14 826 1365 44 578 1.46e-41 163
Msa0055440 MtrunA17_Chr4g0065231 23.302 648 419 17 126 753 40 629 8.26e-40 158
Msa0055440 MtrunA17_Chr4g0028621 28.151 476 276 11 852 1273 506 969 1.29e-40 164
Msa0055440 MtrunA17_Chr4g0028621 31.522 276 153 7 150 423 503 744 5.31e-24 110
Msa0055440 MtrunA17_Chr7g0264441 35.510 245 152 3 852 1096 278 516 4.22e-40 161
Msa0055440 MtrunA17_Chr7g0264441 30.928 291 164 8 135 423 261 516 4.43e-29 126
Msa0055440 MtrunA17_Chr3g0130331 24.751 602 399 18 802 1373 9 586 5.70e-40 158
Msa0055440 MtrunA17_Chr3g0130331 22.117 633 414 13 153 760 57 635 1.42e-35 145
Msa0055440 MtrunA17_Chr5g0411621 34.043 282 167 6 822 1096 17 286 6.67e-40 159
Msa0055440 MtrunA17_Chr5g0411621 27.431 288 175 4 149 436 46 299 8.43e-28 121
Msa0055440 MtrunA17_Chr8g0393191 28.056 360 236 7 778 1135 5 343 1.67e-38 155
Msa0055440 MtrunA17_Chr8g0393191 28.214 280 168 5 150 429 65 311 3.25e-26 117
Msa0055440 MtrunA17_Chr8g0393191 22.174 230 163 6 1144 1368 518 736 2.69e-12 71.6
Msa0055440 MtrunA17_Chr4g0050201 26.477 491 326 14 895 1365 5 480 2.13e-36 146
Msa0055440 MtrunA17_Chr4g0050201 29.832 238 128 7 193 426 1 203 5.93e-23 105
Msa0055440 MtrunA17_Chr5g0429861 46.528 144 76 1 52 194 66 209 7.19e-36 137
Msa0055440 MtrunA17_Chr4g0026731 25.415 602 375 18 187 754 12 573 1.79e-33 138
Msa0055440 MtrunA17_Chr4g0026731 23.529 527 353 16 895 1382 22 537 3.16e-33 137
Msa0055440 MtrunA17_Chr4g0039231 24.480 625 345 19 893 1417 1 598 7.22e-30 127
Msa0055440 MtrunA17_Chr4g0039231 34.043 235 118 7 196 428 2 201 1.21e-28 123
Msa0055440 MtrunA17_Chr2g0327241 24.776 557 341 20 852 1365 125 646 3.19e-27 119
Msa0055440 MtrunA17_Chr8g0390461 37.671 146 80 3 683 823 2 141 7.60e-25 102
Msa0055440 MtrunA17_Chr8g0390481 85.714 56 7 1 983 1037 7 62 1.67e-24 98.2
Msa0055440 MtrunA17_Chr3g0093331 33.871 186 119 4 872 1054 17 201 3.50e-22 97.8
Msa0055440 MtrunA17_Chr3g0093331 27.600 250 148 3 175 423 19 236 7.85e-22 97.1
Msa0055440 MtrunA17_Chr8g0390451 53.125 64 30 0 229 292 23 86 8.35e-16 74.3
Msa0055440 MtrunA17_Chr7g0266011 44.330 97 47 2 15 104 38 134 6.02e-15 73.2
Msa0055440 MtrunA17_Chr7g0238411 37.500 88 44 2 587 674 27 103 3.38e-14 70.5
Msa0055440 MtrunA17_Chr4g0047831 40.244 82 49 0 970 1051 1 82 3.74e-12 63.9
Msa0055440 MtrunA17_Chr7g0257341 27.374 179 112 7 864 1036 1489 1655 1.03e-11 70.1
Msa0055440 MtrunA17_Chr7g0261961 58.333 48 20 0 1376 1423 23 70 5.31e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055440 AT1G15520.1 63.815 1426 495 7 3 1423 14 1423 0.0 1940
Msa0055440 AT1G66950.1 57.584 1424 574 7 15 1423 46 1454 0.0 1750
Msa0055440 AT2G36380.1 57.765 1423 574 6 15 1423 44 1453 0.0 1738
Msa0055440 AT1G15520.2 64.757 1257 423 6 3 1255 14 1254 0.0 1719
Msa0055440 AT1G15520.2 22.300 574 378 14 848 1368 164 722 3.79e-32 137
Msa0055440 AT2G26910.1 56.070 1425 607 6 11 1423 3 1420 0.0 1669
Msa0055440 AT3G16340.1 54.968 1419 609 5 11 1423 22 1416 0.0 1645
Msa0055440 AT1G15210.1 55.548 1442 604 8 1 1423 19 1442 0.0 1637
Msa0055440 AT3G16340.2 54.686 1419 608 6 11 1423 22 1411 0.0 1631
Msa0055440 AT1G59870.1 54.875 1436 621 7 15 1423 34 1469 0.0 1628
Msa0055440 AT3G30842.1 54.137 1402 623 7 28 1423 31 1418 0.0 1589
Msa0055440 AT2G29940.1 52.609 1418 632 8 23 1423 32 1426 0.0 1557
Msa0055440 AT3G53480.1 50.213 1410 681 8 23 1423 53 1450 0.0 1481
Msa0055440 AT2G37280.1 50.355 1410 676 9 23 1423 19 1413 0.0 1467
Msa0055440 AT2G37280.3 49.340 1439 676 10 23 1423 19 1442 0.0 1449
Msa0055440 AT2G37280.2 51.136 1320 624 8 23 1336 19 1323 0.0 1389
Msa0055440 AT2G37280.2 24.828 580 364 16 841 1365 140 702 3.65e-39 160
Msa0055440 AT2G37280.2 24.399 541 344 13 149 675 835 1324 2.13e-29 128
Msa0055440 AT4G15215.9 47.866 1406 694 9 24 1423 22 1394 0.0 1381
Msa0055440 AT4G15215.4 47.866 1406 694 9 24 1423 22 1394 0.0 1381
Msa0055440 AT4G15215.5 47.866 1406 694 9 24 1423 22 1394 0.0 1381
Msa0055440 AT4G15215.3 47.866 1406 694 9 24 1423 22 1394 0.0 1381
Msa0055440 AT4G15215.2 47.866 1406 694 9 24 1423 22 1394 0.0 1381
Msa0055440 AT4G15215.11 47.866 1406 694 9 24 1423 25 1397 0.0 1380
Msa0055440 AT2G37280.4 51.664 1262 592 5 166 1423 8 1255 0.0 1379
Msa0055440 AT2G37280.4 24.555 562 359 13 149 696 677 1187 1.21e-34 145
Msa0055440 AT4G15233.1 48.229 1412 680 10 23 1423 21 1392 0.0 1376
Msa0055440 AT4G15236.1 47.730 1410 688 9 23 1423 21 1390 0.0 1373
Msa0055440 AT4G15230.3 47.740 1416 697 12 17 1423 19 1400 0.0 1372
Msa0055440 AT4G15230.1 47.740 1416 697 12 17 1423 19 1400 0.0 1372
Msa0055440 AT4G15233.3 48.902 1366 654 8 62 1423 5 1330 0.0 1365
Msa0055440 AT4G15233.6 48.902 1366 654 8 62 1423 5 1330 0.0 1365
Msa0055440 AT4G15215.1 47.511 1406 692 10 24 1423 25 1390 0.0 1363
Msa0055440 AT4G15215.8 47.511 1406 692 10 24 1423 22 1387 0.0 1363
Msa0055440 AT4G15215.10 47.511 1406 692 10 24 1423 22 1387 0.0 1363
Msa0055440 AT4G15215.6 47.511 1406 692 10 24 1423 22 1387 0.0 1363
Msa0055440 AT4G15215.7 47.511 1406 692 10 24 1423 22 1387 0.0 1363
Msa0055440 AT4G15230.4 48.671 1354 656 10 75 1423 2 1321 0.0 1352
Msa0055440 AT4G15233.8 47.592 1412 680 11 23 1423 21 1383 0.0 1349
Msa0055440 AT4G15233.7 47.592 1412 671 11 23 1423 21 1374 0.0 1348
Msa0055440 AT4G15233.2 48.183 1376 641 10 23 1366 21 1356 0.0 1328
Msa0055440 AT4G15230.2 48.387 1333 647 12 17 1342 19 1317 0.0 1300
Msa0055440 AT4G15230.2 24.301 572 361 17 848 1365 151 704 2.50e-34 144
Msa0055440 AT4G15233.5 47.076 701 345 5 62 761 5 680 0.0 663
Msa0055440 AT4G15233.5 52.705 573 268 1 854 1423 677 1249 0.0 644
Msa0055440 AT4G15233.5 23.561 556 358 14 163 703 685 1188 9.37e-37 152
Msa0055440 AT4G15233.5 23.732 552 369 14 849 1365 89 623 3.45e-33 140
Msa0055440 AT4G15233.4 47.076 701 345 5 62 761 5 680 0.0 663
Msa0055440 AT4G15233.4 52.705 573 268 1 854 1423 677 1249 0.0 644
Msa0055440 AT4G15233.4 23.561 556 358 14 163 703 685 1188 9.37e-37 152
Msa0055440 AT4G15233.4 23.732 552 369 14 849 1365 89 623 3.45e-33 140
Msa0055440 AT2G01320.2 27.224 562 360 13 853 1387 90 629 6.18e-56 209
Msa0055440 AT2G01320.2 28.276 580 338 15 147 705 83 605 2.36e-43 171
Msa0055440 AT2G01320.3 27.224 562 360 13 853 1387 90 629 6.75e-56 209
Msa0055440 AT2G01320.3 28.276 580 338 15 147 705 83 605 2.26e-43 171
Msa0055440 AT2G01320.1 27.224 562 360 13 853 1387 90 629 7.29e-56 208
Msa0055440 AT2G01320.1 28.276 580 338 15 147 705 83 605 2.85e-43 170
Msa0055440 AT2G01320.4 27.224 562 360 13 853 1387 90 629 7.29e-56 208
Msa0055440 AT2G01320.4 28.276 580 338 15 147 705 83 605 2.85e-43 170
Msa0055440 AT3G25620.2 28.617 629 395 19 773 1365 7 617 8.47e-56 207
Msa0055440 AT3G25620.2 29.174 545 319 16 148 673 93 589 1.25e-44 174
Msa0055440 AT2G01320.8 27.387 555 352 14 853 1378 90 622 1.13e-55 206
Msa0055440 AT2G01320.8 28.621 580 336 15 147 705 83 605 3.85e-44 172
Msa0055440 AT2G01320.5 27.387 555 352 14 853 1378 90 622 1.13e-55 206
Msa0055440 AT2G01320.5 28.621 580 336 15 147 705 83 605 3.85e-44 172
Msa0055440 AT3G55100.1 24.144 584 400 9 819 1378 15 579 1.51e-55 206
Msa0055440 AT3G55100.1 23.891 586 354 15 147 703 44 566 1.16e-35 146
Msa0055440 AT3G55100.2 24.144 584 400 9 819 1378 15 579 1.51e-55 206
Msa0055440 AT3G55100.2 23.891 586 354 15 147 703 44 566 1.16e-35 146
Msa0055440 AT4G27420.1 27.632 608 400 18 822 1410 33 619 6.15e-54 201
Msa0055440 AT4G27420.1 29.369 555 326 17 154 692 66 570 1.84e-41 163
Msa0055440 AT5G06530.2 27.864 646 384 19 794 1389 124 737 8.25e-54 203
Msa0055440 AT5G06530.2 26.534 554 332 19 153 678 178 684 2.53e-36 149
Msa0055440 AT5G06530.1 27.864 646 384 19 794 1389 124 737 8.25e-54 203
Msa0055440 AT5G06530.1 26.534 554 332 19 153 678 178 684 2.53e-36 149
Msa0055440 AT2G37360.1 26.644 578 376 11 823 1365 95 659 2.09e-52 199
Msa0055440 AT2G37360.1 24.390 574 363 10 154 703 133 659 6.75e-38 154
Msa0055440 AT3G55130.1 24.342 608 402 12 823 1397 70 652 9.70e-52 196
Msa0055440 AT3G55130.1 23.339 617 403 15 111 703 59 629 5.65e-34 141
Msa0055440 AT5G06530.3 28.353 589 348 16 794 1338 124 682 1.26e-51 195
Msa0055440 AT5G06530.3 26.476 559 336 19 153 683 178 689 3.36e-36 148
Msa0055440 AT3G55090.1 23.077 650 423 13 793 1394 40 660 2.47e-51 195
Msa0055440 AT3G55090.1 23.088 706 412 17 129 758 77 727 1.01e-35 147
Msa0055440 AT5G13580.1 24.233 652 447 12 756 1378 11 644 6.06e-51 194
Msa0055440 AT5G13580.1 24.735 566 378 10 149 703 103 631 3.45e-31 132
Msa0055440 AT1G53270.1 26.617 541 331 11 848 1365 46 543 1.92e-50 189
Msa0055440 AT1G53270.1 23.386 573 369 10 140 705 36 545 1.62e-32 135
Msa0055440 AT2G01320.7 29.451 455 276 12 853 1284 90 522 5.44e-50 186
Msa0055440 AT2G01320.7 37.762 286 133 8 147 425 83 330 5.02e-39 154
Msa0055440 AT2G01320.6 29.451 455 276 12 853 1284 90 522 5.44e-50 186
Msa0055440 AT2G01320.6 37.762 286 133 8 147 425 83 330 5.02e-39 154
Msa0055440 AT3G21090.1 27.303 597 383 13 852 1410 44 627 1.09e-49 189
Msa0055440 AT3G21090.1 26.415 689 424 20 120 779 9 643 1.93e-48 186
Msa0055440 AT3G55110.1 23.153 609 407 14 823 1400 60 638 3.87e-48 185
Msa0055440 AT3G55110.1 24.733 562 371 13 154 703 91 612 3.00e-37 151
Msa0055440 AT3G13220.1 25.812 585 375 14 823 1368 62 626 5.59e-48 184
Msa0055440 AT3G13220.1 24.463 605 390 17 104 694 63 614 1.97e-32 136
Msa0055440 AT1G71960.1 29.098 488 295 13 823 1276 37 507 5.72e-48 184
Msa0055440 AT1G71960.1 25.563 622 383 19 154 752 83 647 2.05e-37 151
Msa0055440 AT3G53510.1 25.177 564 386 9 853 1400 126 669 1.63e-47 183
Msa0055440 AT3G53510.1 23.852 566 367 11 154 703 126 643 9.33e-32 134
Msa0055440 AT2G39350.1 23.002 613 396 14 823 1378 64 657 1.82e-47 183
Msa0055440 AT2G39350.1 23.196 582 380 12 148 703 104 644 4.19e-32 135
Msa0055440 AT1G17840.1 27.509 578 358 16 826 1372 50 597 2.92e-47 182
Msa0055440 AT1G17840.1 27.061 558 343 16 153 693 68 578 3.46e-46 179
Msa0055440 AT2G13610.1 25.455 550 365 13 852 1375 61 591 2.93e-47 181
Msa0055440 AT2G13610.1 22.414 638 390 14 153 753 61 630 8.80e-38 152
Msa0055440 AT1G53390.1 27.509 538 303 17 785 1273 473 972 2.36e-46 182
Msa0055440 AT1G53390.1 31.387 274 150 8 153 423 522 760 2.63e-27 121
Msa0055440 AT1G51500.1 27.212 599 383 17 852 1410 43 628 2.71e-46 179
Msa0055440 AT1G51500.1 25.746 637 411 15 144 758 32 628 2.10e-44 173
Msa0055440 AT1G31770.1 27.216 485 319 13 812 1279 39 506 3.47e-46 178
Msa0055440 AT1G31770.1 26.958 549 333 17 150 684 77 571 4.25e-40 159
Msa0055440 AT3G25620.1 32.143 420 244 14 801 1190 41 449 4.83e-46 173
Msa0055440 AT3G25620.1 36.882 263 129 7 148 409 93 319 1.61e-39 154
Msa0055440 AT4G25750.1 26.554 531 329 19 853 1368 30 514 2.36e-44 171
Msa0055440 AT4G25750.1 25.440 625 360 16 154 758 30 568 3.04e-34 140
Msa0055440 AT5G06530.4 26.877 506 314 10 870 1338 1 487 3.26e-44 169
Msa0055440 AT5G06530.4 26.531 539 325 18 171 683 1 494 5.99e-34 138
Msa0055440 AT5G52860.1 26.565 527 326 17 853 1366 44 522 7.26e-44 170
Msa0055440 AT5G52860.1 24.441 626 379 16 146 758 36 580 5.90e-33 137
Msa0055440 AT2G37010.2 25.162 616 385 17 852 1423 499 1082 1.74e-41 167
Msa0055440 AT2G37010.2 30.996 271 151 6 150 418 496 732 2.53e-30 131
Msa0055440 AT2G37010.1 25.162 616 385 17 852 1423 499 1082 1.74e-41 167
Msa0055440 AT2G37010.1 30.996 271 151 6 150 418 496 732 2.53e-30 131
Msa0055440 AT1G51460.1 26.656 634 383 18 154 750 30 618 4.02e-40 160
Msa0055440 AT1G51460.1 28.288 555 329 17 852 1359 29 561 5.66e-40 159
Msa0055440 AT5G60740.1 27.536 483 265 11 852 1273 514 972 6.15e-37 152
Msa0055440 AT5G60740.1 31.769 277 151 8 150 423 511 752 2.65e-24 111
Msa0055440 AT5G19410.1 23.833 621 376 17 154 753 66 610 6.00e-36 146
Msa0055440 AT5G19410.1 25.458 546 358 16 853 1378 66 582 6.05e-36 146
Msa0055440 AT5G19410.2 23.833 621 376 17 154 753 75 619 7.99e-36 146
Msa0055440 AT5G19410.2 25.641 546 357 16 853 1378 75 591 8.21e-36 146
Msa0055440 AT2G28070.2 23.304 575 366 17 154 705 133 655 5.06e-27 119
Msa0055440 AT2G28070.2 22.593 540 374 16 852 1365 132 653 2.68e-23 107
Msa0055440 AT2G28070.1 23.304 575 366 17 154 705 133 655 5.06e-27 119
Msa0055440 AT2G28070.1 22.593 540 374 16 852 1365 132 653 2.68e-23 107
Msa0055440 AT2G41700.1 28.042 189 116 7 854 1035 1474 1649 2.85e-12 72.4
Msa0055440 AT2G41700.2 26.984 189 120 6 854 1036 1432 1608 3.14e-12 72.4

Find 287 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTTGGCCTGATATTT+TGG 0.064855 1_2:+10416920 Msa0055440:CDS
ATATTATTCTTCCATGTTTA+TGG 0.100351 1_2:-10410350 None:intergenic
CACAATGCATAGCTTGTTTA+TGG 0.119114 1_2:+10416824 Msa0055440:CDS
TCACTGTACCTTCCAATATT+TGG 0.138892 1_2:-10414102 None:intergenic
TCAGCTGCTTCTTCTGAAAT+TGG 0.177299 1_2:+10416284 Msa0055440:intron
TTGTCTTTAATTCACCTTCT+AGG 0.190606 1_2:-10411212 None:intergenic
GTCTGCGTTATTTCGGTTTA+TGG 0.198480 1_2:+10414248 Msa0055440:CDS
ACTACTTGCTGTTACTGTTT+TGG 0.202865 1_2:+10414320 Msa0055440:CDS
GAAAAGATCAATGGCAATAT+TGG 0.204895 1_2:+10413348 Msa0055440:CDS
GCAACTTCAATGATAGTTAT+TGG 0.226588 1_2:-10414039 None:intergenic
TATGCTGCTGTTACCTTCAT+AGG 0.240386 1_2:+10417102 Msa0055440:CDS
TCAAATAGTTCATAAGTTTC+TGG 0.245548 1_2:-10413092 None:intergenic
TGAAACAATTCAACTTAAAT+TGG 0.246957 1_2:+10410572 Msa0055440:CDS
ATCTTTGATCTATATTCTTT+AGG 0.259991 1_2:+10418366 Msa0055440:three_prime_UTR
TTATACCCATCTTTGATCTT+AGG 0.264625 1_2:-10416474 None:intergenic
ATTGGCTTTGATCCAAATAT+TGG 0.266450 1_2:+10414090 Msa0055440:CDS
TTCTCTCTTGCAATTTCTCT+TGG 0.270097 1_2:-10415034 None:intergenic
GTTGTATATGATCAATTAAA+TGG 0.272170 1_2:+10410380 Msa0055440:exon
TTGGTTCAAGCTGTTGTATA+TGG 0.273066 1_2:+10417728 Msa0055440:CDS
AGTATATGTAACTGTTTCTT+TGG 0.277915 1_2:-10411164 None:intergenic
GGAAACAACATTTATCATAT+TGG 0.281024 1_2:+10416845 Msa0055440:CDS
GAGAGCAAAGGAGAAGAAAA+AGG 0.286394 1_2:+10410540 Msa0055440:CDS
AAAATCATTCGCTCGCATAT+CGG 0.287428 1_2:+10415633 Msa0055440:CDS
GTTGGATTGCCAGGCGAAAA+TGG 0.288773 1_2:+10415972 Msa0055440:CDS
CATTAGAGGATGTGCATAAA+TGG 0.292953 1_2:+10414529 Msa0055440:intron
ACTTTATTGTTGGCATTGGC+TGG 0.297079 1_2:+10411363 Msa0055440:CDS
TCCCTCAAGCTTATTGGTAT+TGG 0.304856 1_2:+10414812 Msa0055440:CDS
GTTCTCTCAATTGCTACTAT+TGG 0.306445 1_2:-10417150 None:intergenic
TCCATGAACAACACCTTTAT+AGG 0.308923 1_2:-10412957 None:intergenic
AATGGTTTCTTTGGGGTTAT+TGG 0.309634 1_2:+10414547 Msa0055440:CDS
CAGCTGCTTCTTCTGAAATT+GGG 0.309736 1_2:+10416285 Msa0055440:intron
ATAGCTGTGAATGAATTTCT+TGG 0.311083 1_2:+10414600 Msa0055440:CDS
ATGTGCATAAATGGTTTCTT+TGG 0.311277 1_2:+10414538 Msa0055440:CDS
TTCTTATACTATACATACTA+TGG 0.326457 1_2:+10417830 Msa0055440:CDS
CGCCAACGCCCCAAAATATC+AGG 0.328024 1_2:-10416930 None:intergenic
ACCTTCATAGGGGTTGTAAA+TGG 0.328796 1_2:+10417114 Msa0055440:CDS
GTCTTGATTACAAAGAAATA+TGG 0.336726 1_2:+10413503 Msa0055440:CDS
CATTAATAATCACAGTAAAA+AGG 0.337646 1_2:+10417047 Msa0055440:intron
AGATGGCGTCTGCGTTATTT+CGG 0.339586 1_2:+10414241 Msa0055440:CDS
ATCTGATATCATCAAAAGTT+AGG 0.340002 1_2:-10415289 None:intergenic
TGTGCATAAATGGTTTCTTT+GGG 0.341235 1_2:+10414539 Msa0055440:CDS
TATCATTGAAGTTGCCATTT+GGG 0.342696 1_2:+10414047 Msa0055440:CDS
TATTGGTATTGGATTGGAAT+TGG 0.345237 1_2:+10414823 Msa0055440:CDS
AAAGGGTTGAAGAATTTGTT+AGG 0.345327 1_2:+10418195 Msa0055440:CDS
CCACCTCATTCTATGCAATA+TGG 0.349574 1_2:+10417903 Msa0055440:CDS
CTAGTTGCATGATCAACTTC+AGG 0.353568 1_2:-10415739 None:intergenic
TTGACAGTGACAAAGTTATA+AGG 0.355019 1_2:-10413386 None:intergenic
TGTTCATGTTGTGTCCATAT+TGG 0.356943 1_2:-10418157 None:intergenic
ATTTCCAACATCCATGTTGC+AGG 0.362396 1_2:-10416498 None:intergenic
TCAAATCTAACTTCAATTGT+TGG 0.362763 1_2:-10410937 None:intergenic
ATGCCAGCAACATGTGGATT+TGG 0.364822 1_2:-10417875 None:intergenic
TTTCGGTTTATGGCAGCATT+AGG 0.365866 1_2:+10414258 Msa0055440:CDS
CATATACTTCAGAATGTTAG+TGG 0.366262 1_2:+10411179 Msa0055440:CDS
TTTAATTCTTACCTTCATAT+AGG 0.366791 1_2:-10412228 None:intergenic
TCATTAAGAGAAGCACTTGT+TGG 0.366983 1_2:+10415954 Msa0055440:CDS
CCTGTTGCATGGACCTTGAA+TGG 0.367493 1_2:+10418122 Msa0055440:CDS
TTTGCACTTATCTTCACCTT+TGG 0.368924 1_2:+10418287 Msa0055440:CDS
TCTCTTTGCTTGTAAAAGAT+AGG 0.371953 1_2:-10413961 None:intergenic
CTGAGATACCTCTTATCATT+TGG 0.374285 1_2:-10412792 None:intergenic
CTATCATTGAAGTTGCCATT+TGG 0.374934 1_2:+10414046 Msa0055440:CDS
GGATTGGTGACTTCCCAATA+TGG 0.375732 1_2:+10418143 Msa0055440:CDS
CGATACTCCCAATGTTTCAT+TGG 0.377834 1_2:-10414767 None:intergenic
ATTGTAGTGGCAAACACATT+TGG 0.379168 1_2:+10414288 Msa0055440:CDS
TGGAGTACTAACAGCTTTGA+TGG 0.379476 1_2:+10415504 Msa0055440:CDS
TATGGTGGAAATGGTACTAT+TGG 0.381479 1_2:+10418093 Msa0055440:CDS
CAAGATTTATTCAATGCAAT+GGG 0.382322 1_2:+10417072 Msa0055440:CDS
CTTCTTTGTGAATGTGATAG+AGG 0.382682 1_2:+10411020 Msa0055440:CDS
AAAAGATCAATGGCAATATT+GGG 0.384037 1_2:+10413349 Msa0055440:CDS
CAGATATATGCTGGTCCAAT+AGG 0.385213 1_2:+10416315 Msa0055440:CDS
TTCATATAGGCATTAATATC+AGG 0.386369 1_2:-10412215 None:intergenic
AAATCATTCGCTCGCATATC+GGG 0.386894 1_2:+10415634 Msa0055440:CDS
GTTCATGTTGTGTCCATATT+GGG 0.387495 1_2:-10418156 None:intergenic
TCTCTCTTGCAATTTCTCTT+GGG 0.387856 1_2:-10415033 None:intergenic
TAGTACCATTTCCACCATAT+TGG 0.389489 1_2:-10418089 None:intergenic
TGTAACTGTTTCTTTGGACT+TGG 0.391954 1_2:-10411158 None:intergenic
TCGGAACAGTGGTTGCCTAT+TGG 0.397546 1_2:-10416330 None:intergenic
ACATAAGCTGATGTTCTTTG+TGG 0.397956 1_2:-10411960 None:intergenic
AACAATTGAAGTTAGATTTG+AGG 0.398233 1_2:+10410939 Msa0055440:CDS
ATAATGACCGGTATATTGTT+TGG 0.398657 1_2:+10416907 Msa0055440:CDS
ACCTATAAAGGTGTTGTTCA+TGG 0.401163 1_2:+10412956 Msa0055440:CDS
GACGTTCCTCGGAAACTCCT+TGG 0.402818 1_2:-10415444 None:intergenic
CAAGCTTATTGGTATTGGAT+TGG 0.406340 1_2:+10414817 Msa0055440:CDS
GGTCATTGACTACATTCTTA+AGG 0.407138 1_2:+10412648 Msa0055440:CDS
TGAGGTTCTTCATTCATGTA+TGG 0.409943 1_2:-10418431 None:intergenic
GGATGAGATATCAAATGGTT+TGG 0.410386 1_2:+10412977 Msa0055440:CDS
TACCGGTCATTATAGTAAAT+AGG 0.410616 1_2:-10416897 None:intergenic
ATGCTGCTGTTACCTTCATA+GGG 0.412546 1_2:+10417103 Msa0055440:CDS
TGCTGGAAAGACTACTTTAA+TGG 0.413081 1_2:+10415537 Msa0055440:CDS
GTGATGAAACTTCAGCAATC+TGG 0.413679 1_2:+10411897 Msa0055440:intron
CATAGAACTTCCCCACATCT+TGG 0.416674 1_2:+10417709 Msa0055440:CDS
GATGTTTATTGAGGAAGTTA+TGG 0.419820 1_2:+10415914 Msa0055440:intron
GACCACTTTATTGTTGGCAT+TGG 0.422841 1_2:+10411359 Msa0055440:CDS
CCATTCAAGGTCCATGCAAC+AGG 0.425055 1_2:-10418122 None:intergenic
AATACCTGTGCAAGAGCATA+TGG 0.427325 1_2:-10417216 None:intergenic
TGGTCGTCGCCATTGATGTA+TGG 0.428069 1_2:+10414567 Msa0055440:CDS
GCTAGCAGTAGTGGAAGAAA+AGG 0.428499 1_2:+10415239 Msa0055440:CDS
GAGAAGGAACACTAAGCTCT+TGG 0.428866 1_2:-10416750 None:intergenic
TGGAAAGACCACTTTATTGT+TGG 0.429617 1_2:+10411353 Msa0055440:CDS
ACTCCAAATCCACATGTTGC+TGG 0.429832 1_2:+10417872 Msa0055440:CDS
AGTTCATAAGTTTCTGGTGC+TGG 0.431816 1_2:-10413086 None:intergenic
GAATACCAATATGGTGGAAA+TGG 0.431960 1_2:+10418084 Msa0055440:CDS
GAAGCACTTGTTGGATTGCC+AGG 0.432435 1_2:+10415963 Msa0055440:CDS
GAATCCATCGATAATATTCA+TGG 0.433230 1_2:+10416046 Msa0055440:CDS
GTTAGGGATAGAGGTTGAAA+AGG 0.434115 1_2:-10415272 None:intergenic
TTTGGGGCGTTGGCGCGAAA+AGG 0.437367 1_2:+10416938 Msa0055440:CDS
TGTAAGTCTCTTGCGTTGTT+CGG 0.437430 1_2:-10416003 None:intergenic
CCCAATGTTTCATTGGAACT+AGG 0.441237 1_2:-10414760 None:intergenic
CGGAAAAGAGGCAAATCTTA+AGG 0.446142 1_2:+10416530 Msa0055440:CDS
AACATGTGGATTTGGAGTTA+TGG 0.448272 1_2:-10417867 None:intergenic
TCTTTCTGGACACTTGAAAC+CGG 0.451565 1_2:-10413192 None:intergenic
ATTGGAATTGGAGCTTTGAT+TGG 0.452326 1_2:+10414835 Msa0055440:CDS
TGGTTCAAGCTGTTGTATAT+GGG 0.452429 1_2:+10417729 Msa0055440:CDS
GAATTTGTTAGGAATTACTT+TGG 0.453039 1_2:+10418206 Msa0055440:CDS
ATGCAGGAAGCAGCAATAGA+AGG 0.453401 1_2:+10412610 Msa0055440:intron
TTCATGGATGAGATATCAAA+TGG 0.455121 1_2:+10412972 Msa0055440:CDS
TGAAATTTAGACTTGTCAAA+TGG 0.457540 1_2:-10413473 None:intergenic
GAGACTTGGCAAAGATTTGA+AGG 0.466904 1_2:+10411386 Msa0055440:CDS
GTTCTCATATTCTCAATGTA+AGG 0.468030 1_2:+10418396 Msa0055440:three_prime_UTR
GTGGAATCATAAAGCCTAGA+AGG 0.470094 1_2:+10411198 Msa0055440:CDS
AATGGCAGAGAATACCAATA+TGG 0.472097 1_2:+10418075 Msa0055440:intron
TTCTACAGAGAAAGAGCTGC+AGG 0.473026 1_2:+10417177 Msa0055440:CDS
AGGCATAATTCTTTCAGTAA+AGG 0.474024 1_2:+10418461 Msa0055440:three_prime_UTR
CAAGGGGTTGGACAAAATTA+CGG 0.475032 1_2:+10412050 Msa0055440:CDS
ATCAAAGCTGTTAGTACTCC+AGG 0.475542 1_2:-10415502 None:intergenic
TCCAATACCAATAAGCTTGA+GGG 0.475720 1_2:-10414813 None:intergenic
CGATCTGATTCAGTACTTCG+AGG 0.475840 1_2:+10416350 Msa0055440:CDS
TCTTGGACATGGTTGGAGAA+AGG 0.478610 1_2:+10414617 Msa0055440:CDS
GGAGTTCCTAAGATCAAAGA+TGG 0.479197 1_2:+10416468 Msa0055440:CDS
GTTGAAACTCAAGGAAAGAA+TGG 0.479559 1_2:+10410659 Msa0055440:CDS
GATGCTGGTTGGACCTATAA+AGG 0.482255 1_2:+10412944 Msa0055440:CDS
TTAACAAGAAGGAGCTGCTA+AGG 0.483240 1_2:+10413528 Msa0055440:CDS
GAAGGAAACATTACAGTATC+CGG 0.484200 1_2:+10415595 Msa0055440:CDS
AAAACTAGTGGATATATTGA+AGG 0.485153 1_2:+10415577 Msa0055440:CDS
AATGGTAGAATGATACATCT+TGG 0.489151 1_2:-10413842 None:intergenic
CCCTAGTTCCAATGAAACAT+TGG 0.489781 1_2:+10414759 Msa0055440:CDS
TCTGATATCATCAAAAGTTA+GGG 0.493436 1_2:-10415288 None:intergenic
GTCACAGTAGCAATGTTCAA+TGG 0.494283 1_2:+10413904 Msa0055440:CDS
ATTGGATTTGTCCTGTTGCA+TGG 0.496066 1_2:+10418111 Msa0055440:CDS
CAAAAGTTCGAGACGTTCCT+CGG 0.496151 1_2:-10415455 None:intergenic
CCTAGTTCCAATGAAACATT+GGG 0.497850 1_2:+10414760 Msa0055440:CDS
TCAGCAAGATGTCAAGGGGT+TGG 0.499033 1_2:+10412038 Msa0055440:CDS
GCAAGATTTATTCAATGCAA+TGG 0.500297 1_2:+10417071 Msa0055440:CDS
TTGGCATTGGCTGGGAGACT+TGG 0.500625 1_2:+10411372 Msa0055440:CDS
CACACTTGACAATGGTCAAA+GGG 0.501753 1_2:+10418178 Msa0055440:CDS
TCATCAAAAGTTAGGGATAG+AGG 0.501803 1_2:-10415281 None:intergenic
TTGATGGGTGTAAGTGGTGC+TGG 0.502215 1_2:+10415520 Msa0055440:CDS
GATCATAGTATATGCCATGA+TGG 0.503566 1_2:+10417751 Msa0055440:CDS
TTTCATGTAGGCAAACAACT+TGG 0.505508 1_2:+10413434 Msa0055440:CDS
TTAGGTGTAACTCACAGATA+AGG 0.505524 1_2:-10417951 None:intergenic
TGCATCTCTTACTACGCCAT+TGG 0.505723 1_2:+10414072 Msa0055440:CDS
CTGGAAGAGTAACATACAAT+GGG 0.508511 1_2:+10411916 Msa0055440:CDS
GATTCGTAGACCGTAACATT+GGG 0.509485 1_2:-10415685 None:intergenic
GTGGAAGCACAAGTTTATGT+TGG 0.509900 1_2:+10410970 Msa0055440:CDS
TTCATGGATGAACCAACCTC+TGG 0.510856 1_2:+10416062 Msa0055440:CDS
AAAGTTCTTGTTGAAACTCA+AGG 0.512345 1_2:+10410650 Msa0055440:CDS
CAACAATTGCAACCACTCCT+AGG 0.513061 1_2:-10418244 None:intergenic
TTAATACTATAGGCTATTCA+AGG 0.513141 1_2:+10416447 Msa0055440:intron
GCTTTCTCAGCAAGATGTCA+AGG 0.513914 1_2:+10412032 Msa0055440:CDS
CTTTCTCAGCAAGATGTCAA+GGG 0.514037 1_2:+10412033 Msa0055440:CDS
GAATAATGAAGCCTGAGAAA+AGG 0.516857 1_2:-10417928 None:intergenic
TAGGTGTAACTCACAGATAA+GGG 0.517022 1_2:-10417950 None:intergenic
TGAGATGCAGATGTTTATTG+AGG 0.517449 1_2:+10415905 Msa0055440:intron
CAAATGATAAGAGGTATCTC+AGG 0.517881 1_2:+10412793 Msa0055440:CDS
ATGAAGAACCTCATGTAACT+AGG 0.518884 1_2:+10418441 Msa0055440:three_prime_UTR
CCAATGTTTCATTGGAACTA+GGG 0.522252 1_2:-10414759 None:intergenic
AGATTCGTAGACCGTAACAT+TGG 0.522303 1_2:-10415686 None:intergenic
TAGGCATTAATATCAGGATC+TGG 0.523122 1_2:-10412209 None:intergenic
TATTCACTCACCCAATGTTA+CGG 0.523813 1_2:+10415675 Msa0055440:CDS
ACCATTTACAACCCCTATGA+AGG 0.523911 1_2:-10417115 None:intergenic
GGAGGATTTGTTATTTCAAG+AGG 0.524012 1_2:+10414342 Msa0055440:CDS
TAGAAATAATGTCGTCGTCA+AGG 0.525791 1_2:-10413815 None:intergenic
AACAACATTTATCATATTGG+AGG 0.526283 1_2:+10416848 Msa0055440:CDS
CTCCTATTTACTATAATGAC+CGG 0.528662 1_2:+10416895 Msa0055440:CDS
GTAGGAGACCAAATGATAAG+AGG 0.529332 1_2:+10412784 Msa0055440:CDS
GGAAGTCACCAATCCATTCA+AGG 0.531272 1_2:-10418135 None:intergenic
TTGAGAAAACATCCATGCAA+TGG 0.531599 1_2:-10410431 None:intergenic
GTAAGAGATGCATTCCCAAA+TGG 0.532442 1_2:-10414061 None:intergenic
TAATCCTGCAACATGGATGT+TGG 0.532590 1_2:+10416494 Msa0055440:CDS
TTTAGACTTGTCAAATGGAT+CGG 0.532619 1_2:-10413468 None:intergenic
TGATATTAATGCCTATATGA+AGG 0.533717 1_2:+10412217 Msa0055440:CDS
TGACATCAAGAAAAGATCAA+TGG 0.534017 1_2:+10413339 Msa0055440:CDS
GAAATATGGTATTAACAAGA+AGG 0.536004 1_2:+10413517 Msa0055440:CDS
ATATGTCAATACTCGGCTGA+TGG 0.536229 1_2:-10416166 None:intergenic
TGAGGATGCACAAACATACA+TGG 0.536386 1_2:+10413864 Msa0055440:CDS
AATCTTTGCTATATTCTGCA+TGG 0.536529 1_2:+10415704 Msa0055440:CDS
CTTTATTGTTGGCATTGGCT+GGG 0.539119 1_2:+10411364 Msa0055440:CDS
GGTTTATGGCAGCATTAGGA+AGG 0.541213 1_2:+10414262 Msa0055440:CDS
ACAAAGAAGTTAAATAATGT+AGG 0.542162 1_2:-10411006 None:intergenic
TCTATATTCTTTAGGAAACA+TGG 0.543078 1_2:+10418374 Msa0055440:three_prime_UTR
TTATAACTTTGTCACTGTCA+AGG 0.543634 1_2:+10413388 Msa0055440:CDS
AGTTGATCATGCAACTAGAA+AGG 0.544116 1_2:+10415744 Msa0055440:CDS
AATTACAACAGCCGGAAAAG+AGG 0.544521 1_2:+10416518 Msa0055440:CDS
CATATTTGATTCCTTTGATG+AGG 0.544638 1_2:+10416184 Msa0055440:CDS
CTATAAATATACCATAAACA+TGG 0.549910 1_2:+10410339 None:intergenic
ATGTTGGAAATTACAACAGC+CGG 0.551504 1_2:+10416510 Msa0055440:CDS
CAATGACCACACTGTTCTGA+TGG 0.551828 1_2:-10412633 None:intergenic
TAGATTTGAGGATATAAATG+TGG 0.553013 1_2:+10410951 Msa0055440:CDS
GAACAATTAAGCTAATTACT+AGG 0.554294 1_2:+10418483 Msa0055440:three_prime_UTR
AAGCACAAGTTTATGTTGGA+AGG 0.555462 1_2:+10410974 Msa0055440:CDS
ATCCAATACCAATAAGCTTG+AGG 0.556389 1_2:-10414814 None:intergenic
TTCAAGTGTCCAGAAAGAAA+AGG 0.557013 1_2:+10413197 Msa0055440:CDS
GATAATATGCCAGCAACATG+TGG 0.557494 1_2:-10417881 None:intergenic
AGCCAATGCCAACAATAAAG+TGG 0.557584 1_2:-10411361 None:intergenic
TCTGGAAGAGTAACATACAA+TGG 0.558505 1_2:+10411915 Msa0055440:CDS
ATGAATTTCTTGGACATGGT+TGG 0.558558 1_2:+10414610 Msa0055440:CDS
TATCAGGCCAAACAATATAC+CGG 0.559518 1_2:-10416914 None:intergenic
CAAACAACTTGGAGAAGAGC+TGG 0.560436 1_2:+10413445 Msa0055440:CDS
GCTTTGATCCAAATATTGGA+AGG 0.561184 1_2:+10414094 Msa0055440:CDS
GATGGACAAATTGTGTATCA+AGG 0.561608 1_2:+10413134 Msa0055440:CDS
TCATCCATGAATATTATCGA+TGG 0.562283 1_2:-10416050 None:intergenic
GAAAACAAAGCTAGCAGTAG+TGG 0.563476 1_2:+10415230 Msa0055440:CDS
GGAGGTGAGCAGATATATGC+TGG 0.564777 1_2:+10416306 Msa0055440:CDS
ATCTGAACGTGAAGATGATG+AGG 0.569558 1_2:+10410455 Msa0055440:CDS
GTTGAATGCTTTGATACCAA+AGG 0.570906 1_2:-10418303 None:intergenic
GATATACTACTTCTCACTGA+TGG 0.570972 1_2:+10413116 Msa0055440:CDS
GAGAATACTTACCTCATCAA+AGG 0.574222 1_2:-10416195 None:intergenic
ACGCCATCTGATTAATGCAT+AGG 0.575515 1_2:-10414227 None:intergenic
GGGCTTATTCTCTTCCACCA+TGG 0.578746 1_2:+10414004 Msa0055440:CDS
ATCATAGTATATGCCATGAT+GGG 0.579894 1_2:+10417752 Msa0055440:CDS
TGAACATGACTTCCTAGGAG+TGG 0.581126 1_2:+10418232 Msa0055440:CDS
AGGAGTGGTTGCAATTGTTG+TGG 0.583205 1_2:+10418247 Msa0055440:CDS
GCCTACATGAAATAATTCGA+AGG 0.584063 1_2:-10413423 None:intergenic
GTATGTTTGTGCATCCTCAA+TGG 0.585304 1_2:-10413860 None:intergenic
GAATCAAATATGTCAATACT+CGG 0.586210 1_2:-10416173 None:intergenic
AGGGGTTGTAAATGGTGCCT+CGG 0.587490 1_2:+10417122 Msa0055440:CDS
ACACACTTGACAATGGTCAA+AGG 0.589771 1_2:+10418177 Msa0055440:CDS
TGCATGGACCTTGAATGGAT+TGG 0.590662 1_2:+10418127 Msa0055440:CDS
AACAGCTTGAACCAAGATGT+GGG 0.591715 1_2:-10417720 None:intergenic
AACATGGAAGAACCATTGCA+TGG 0.591910 1_2:+10410419 Msa0055440:CDS
AAAGTGGTCTTTCCAGAACC+AGG 0.592498 1_2:-10411345 None:intergenic
AACTCAAGGAAAGAATGGAC+AGG 0.592934 1_2:+10410664 Msa0055440:CDS
AGTCAACATGATAATCACAT+TGG 0.593528 1_2:+10411984 Msa0055440:CDS
TGAACTGCTGAGAAAAGAGA+AGG 0.593745 1_2:+10412172 Msa0055440:CDS
GGCAGAGAATACCAATATGG+TGG 0.594386 1_2:+10418078 Msa0055440:intron
AGTCCTATGCATTAATCAGA+TGG 0.595979 1_2:+10414224 Msa0055440:CDS
GTGAATGAATTTCTTGGACA+TGG 0.598840 1_2:+10414606 Msa0055440:CDS
GAAATTTGGACTCACTTGTG+TGG 0.599157 1_2:-10413612 None:intergenic
CTGCTTCTTCTGAAATTGGG+AGG 0.600342 1_2:+10416288 Msa0055440:CDS
AGAGTAACATACAATGGGAA+AGG 0.604710 1_2:+10411921 Msa0055440:CDS
TGTGAAGGTGAGATGCTGGT+TGG 0.605289 1_2:+10412933 Msa0055440:intron
TGTCCACTCAAATCCCATCA+TGG 0.606589 1_2:-10417765 None:intergenic
GTGCATAAATGGTTTCTTTG+GGG 0.608849 1_2:+10414540 Msa0055440:CDS
CAACAGCTTGAACCAAGATG+TGG 0.610125 1_2:-10417721 None:intergenic
GTTTATGGCAGCATTAGGAA+GGG 0.610521 1_2:+10414263 Msa0055440:CDS
GCATTCAGAAAAGATCAAGC+AGG 0.612202 1_2:+10415005 Msa0055440:intron
TATGCCATATGCTCTTGCAC+AGG 0.612244 1_2:+10417212 Msa0055440:CDS
GCACCATATTGCATAGAATG+AGG 0.612531 1_2:-10417906 None:intergenic
GATGTATCATTCTACCATTG+AGG 0.613188 1_2:+10413846 Msa0055440:CDS
ATATTCTGTTGACATGCCAC+AGG 0.615869 1_2:+10415310 Msa0055440:CDS
TAACAAGAAGGAGCTGCTAA+GGG 0.616737 1_2:+10413529 Msa0055440:CDS
CAATTGTAATGCGAACAGTA+AGG 0.617387 1_2:+10416105 Msa0055440:CDS
GGAGTACTAACAGCTTTGAT+GGG 0.619565 1_2:+10415505 Msa0055440:CDS
AATATTTGGATCAAAGCCAA+TGG 0.620900 1_2:-10414088 None:intergenic
ACAGCTTTGATGGGTGTAAG+TGG 0.622071 1_2:+10415514 Msa0055440:CDS
GGAAGAGAATAAGCCCATGA+AGG 0.624504 1_2:-10413997 None:intergenic
CCATATTGCATAGAATGAGG+TGG 0.626247 1_2:-10417903 None:intergenic
CTCGAAGTACTGAATCAGAT+CGG 0.632993 1_2:-10416349 None:intergenic
ATGGGTATAATCCTGCAACA+TGG 0.635121 1_2:+10416487 Msa0055440:CDS
AACATGAACACACTTGACAA+TGG 0.635524 1_2:+10418170 Msa0055440:CDS
GCCTTCGAATTATTTCATGT+AGG 0.635886 1_2:+10413422 Msa0055440:CDS
TGCTCTAGCATCAAGTCCAG+AGG 0.639684 1_2:-10416078 None:intergenic
CTAGCATCAAGTCCAGAGGT+TGG 0.639863 1_2:-10416074 None:intergenic
TTTCTCAGCAAGATGTCAAG+GGG 0.644020 1_2:+10412034 Msa0055440:CDS
GTAAGGAACACTGTGGACAC+AGG 0.644504 1_2:+10416122 Msa0055440:CDS
ATTAGGAAGGGATATTGTAG+TGG 0.647301 1_2:+10414275 Msa0055440:CDS
CAGTAGTGGAAGAAAAGGCA+TGG 0.647646 1_2:+10415244 Msa0055440:CDS
GAATTATGCCTAGTTACATG+AGG 0.648356 1_2:-10418449 None:intergenic
ATACTATGGTATGATGACAA+TGG 0.651111 1_2:+10417844 Msa0055440:CDS
ATGATAAGAGGTATCTCAGG+TGG 0.655391 1_2:+10412796 Msa0055440:CDS
GAGGATGCACAAACATACAT+GGG 0.658532 1_2:+10413865 Msa0055440:CDS
GAGTTCCTAAGATCAAAGAT+GGG 0.658778 1_2:+10416469 Msa0055440:CDS
ATATGATCAATTAAATGGAG+AGG 0.661770 1_2:+10410385 Msa0055440:exon
ATGCCATGATGGGATTTGAG+TGG 0.663142 1_2:+10417762 Msa0055440:CDS
TGATGTTTGTGCTGACACAA+TGG 0.669187 1_2:+10412762 Msa0055440:CDS
TGCTACTATTGGTTGTACCG+AGG 0.671410 1_2:-10417139 None:intergenic
TGCTGCTGTTACCTTCATAG+GGG 0.677062 1_2:+10417104 Msa0055440:CDS
CTGATGGATTGTGCACACCA+CGG 0.681846 1_2:-10416150 None:intergenic
AGAGGAGTGACACTAAAACA+TGG 0.682472 1_2:+10410403 Msa0055440:CDS
GTTTGTGCTGACACAATGGT+AGG 0.682652 1_2:+10412766 Msa0055440:CDS
ACTGAATCAGATCGGAACAG+TGG 0.685710 1_2:-10416341 None:intergenic
GTATCGATACTGAAATCTCG+CGG 0.706769 1_2:+10414784 Msa0055440:CDS
AAGATTTATTCAATGCAATG+GGG 0.709593 1_2:+10417073 Msa0055440:CDS
ACAGCTTGAACCAAGATGTG+GGG 0.710152 1_2:-10417719 None:intergenic
TGTGGACACAGGACGTACCG+TGG 0.713192 1_2:+10416133 Msa0055440:CDS
GTGGTCTTTCCAGAACCAGG+TGG 0.752161 1_2:-10411342 None:intergenic
AGAAGGCCATCAGAACAGTG+TGG 0.758039 1_2:+10412627 Msa0055440:CDS
GCGAACAGTAAGGAACACTG+TGG 0.795490 1_2:+10416115 Msa0055440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGAATTAAATAATCTTTT+TGG + chr1_2:10412240-10412259 Msa0055440:intron 10.0%
!! AAAAATATTAAAAACAAAAG+GGG - chr1_2:10414650-10414669 None:intergenic 10.0%
!!! ATATATACAGATTTTATTTA+AGG + chr1_2:10418600-10418619 Msa0055440:three_prime_UTR 10.0%
!! ACAAGAATTAATAATCAAAA+TGG - chr1_2:10410716-10410735 None:intergenic 15.0%
!! AAAAAGACATAAAACAATTT+CGG - chr1_2:10410812-10410831 None:intergenic 15.0%
!!! ATTTACTTTTTAAGATTTTG+AGG + chr1_2:10411291-10411310 Msa0055440:intron 15.0%
!! GTAAATTCAAATTTAAACTA+TGG - chr1_2:10411854-10411873 None:intergenic 15.0%
!! AGATAATAACTAAATTAGAT+TGG + chr1_2:10411875-10411894 Msa0055440:intron 15.0%
!!! TAAGATTGGTTTAAAATATT+TGG - chr1_2:10412112-10412131 None:intergenic 15.0%
!!! ATTGTTTAAGTTTCAAATTA+AGG - chr1_2:10412890-10412909 None:intergenic 15.0%
!!! TGATTAATAATATTTTGTGA+AGG + chr1_2:10412918-10412937 Msa0055440:intron 15.0%
!!! TTGTTTTAAAATCAGAAATT+TGG - chr1_2:10413629-10413648 None:intergenic 15.0%
!!! CACTTTATTTAACATTTTTA+TGG - chr1_2:10413703-10413722 None:intergenic 15.0%
!! CAAAATCATTAAATATGTTA+TGG - chr1_2:10415172-10415191 None:intergenic 15.0%
!!! ATTTATTTTTAAGATCATAG+TGG + chr1_2:10415341-10415360 Msa0055440:intron 15.0%
!!! TTTATTTTTAAGATCATAGT+GGG + chr1_2:10415342-10415361 Msa0055440:intron 15.0%
!! ATTCAGTACTTAAAATAAAA+TGG - chr1_2:10416226-10416245 None:intergenic 15.0%
!!! ACTGAAATTTATTATTTTGA+TGG + chr1_2:10416667-10416686 Msa0055440:intron 15.0%
!! TGATTATTAATGATATAACA+TGG - chr1_2:10417039-10417058 None:intergenic 15.0%
!! ATCATATAATAGATGTTATT+AGG - chr1_2:10417985-10418004 None:intergenic 15.0%
!!! ACTTTAAAAATTGATAACAA+TGG + chr1_2:10418057-10418076 Msa0055440:intron 15.0%
!! ATATTATTCTTCCATGTTTA+TGG - chr1_2:10410353-10410372 None:intergenic 20.0%
!! GTTGTATATGATCAATTAAA+TGG + chr1_2:10410380-10410399 Msa0055440:exon 20.0%
!! TGAAACAATTCAACTTAAAT+TGG + chr1_2:10410572-10410591 Msa0055440:CDS 20.0%
!! ATTCTTGTTCAAAAAGATTA+TGG + chr1_2:10410728-10410747 Msa0055440:intron 20.0%
!! ACAAAGAAGTTAAATAATGT+AGG - chr1_2:10411009-10411028 None:intergenic 20.0%
!! TTTAATTCTTACCTTCATAT+AGG - chr1_2:10412231-10412250 None:intergenic 20.0%
!! TAGTATTTGTGAAATTGTTT+GGG + chr1_2:10412292-10412311 Msa0055440:intron 20.0%
!! TTTCACAAGTTAACTATATT+TGG - chr1_2:10412690-10412709 None:intergenic 20.0%
!!! AATTTGAAACTTAAACAATG+AGG + chr1_2:10412891-10412910 Msa0055440:intron 20.0%
!!! TTTTTTTTTCTTCGTATTTG+AGG + chr1_2:10414421-10414440 Msa0055440:intron 20.0%
!! TAAGAAAGATTCAATACATT+AGG - chr1_2:10414490-10414509 None:intergenic 20.0%
!! TAGTTAAGAAATCTTATGAT+AGG + chr1_2:10414671-10414690 Msa0055440:intron 20.0%
!!! TAGCTTAAATTTTTGTATTC+AGG + chr1_2:10415146-10415165 Msa0055440:intron 20.0%
!!! TTATTTTTAAGATCATAGTG+GGG + chr1_2:10415343-10415362 Msa0055440:intron 20.0%
!!! TCTGTTATGTTGATTATATA+GGG + chr1_2:10415412-10415431 Msa0055440:intron 20.0%
!!! TTGTTTTCTTTTGAAATTAG+AGG + chr1_2:10415772-10415791 Msa0055440:intron 20.0%
!!! GATGTTTAAATCCTATTTTA+AGG - chr1_2:10415812-10415831 None:intergenic 20.0%
!!! TACAAAAACGTATTTTTACA+AGG - chr1_2:10416604-10416623 None:intergenic 20.0%
!! AATTATTAGAACATAAACTG+CGG - chr1_2:10416643-10416662 None:intergenic 20.0%
!! CAAAATAATAAATTTCAGTG+AGG - chr1_2:10416666-10416685 None:intergenic 20.0%
!! ATTAATGATATAACATGGTA+AGG - chr1_2:10417034-10417053 None:intergenic 20.0%
!! CATTAATAATCACAGTAAAA+AGG + chr1_2:10417047-10417066 Msa0055440:intron 20.0%
!! ATCACAATGAAAATGAATAA+TGG - chr1_2:10417249-10417268 None:intergenic 20.0%
!!! TTTTCTATTATGAAATGCAT+AGG + chr1_2:10417446-10417465 Msa0055440:intron 20.0%
!! TTTCTATTATGAAATGCATA+GGG + chr1_2:10417447-10417466 Msa0055440:intron 20.0%
!! AATGTTGCATTTAAATAATC+CGG + chr1_2:10417490-10417509 Msa0055440:intron 20.0%
!!! TTTTGTGTATTATTTATCGA+CGG - chr1_2:10417575-10417594 None:intergenic 20.0%
!! AATTGTTTATTATGAATTGC+AGG + chr1_2:10417682-10417701 Msa0055440:intron 20.0%
!! TTCTTATACTATACATACTA+TGG + chr1_2:10417830-10417849 Msa0055440:CDS 20.0%
!! ATAATAGATGTTATTAGGAA+AGG - chr1_2:10417980-10417999 None:intergenic 20.0%
!! ATCTTTGATCTATATTCTTT+AGG + chr1_2:10418366-10418385 Msa0055440:three_prime_UTR 20.0%
! ATATGATCAATTAAATGGAG+AGG + chr1_2:10410385-10410404 Msa0055440:exon 25.0%
!!! ATTATGGTTTTTTATCTGTG+AGG + chr1_2:10410744-10410763 Msa0055440:intron 25.0%
! AGTTTGACCTTATAACTTTA+AGG + chr1_2:10410785-10410804 Msa0055440:intron 25.0%
! GTTTGACCTTATAACTTTAA+GGG + chr1_2:10410786-10410805 Msa0055440:intron 25.0%
! TCAAATCTAACTTCAATTGT+TGG - chr1_2:10410940-10410959 None:intergenic 25.0%
! AACAATTGAAGTTAGATTTG+AGG + chr1_2:10410939-10410958 Msa0055440:CDS 25.0%
! TAGATTTGAGGATATAAATG+TGG + chr1_2:10410951-10410970 Msa0055440:CDS 25.0%
!!! GCTATTTTTTGTTTGTTAAG+AGG + chr1_2:10411111-10411130 Msa0055440:intron 25.0%
!! AGTATATGTAACTGTTTCTT+TGG - chr1_2:10411167-10411186 None:intergenic 25.0%
!!! TAAGATTTTGAGGTTTTTGT+AGG + chr1_2:10411301-10411320 Msa0055440:intron 25.0%
! ATTTGAAGGTAAAGAAACTA+AGG + chr1_2:10411400-10411419 Msa0055440:intron 25.0%
!! ACTAAGGTTTCAATCATTTT+AGG + chr1_2:10411416-10411435 Msa0055440:intron 25.0%
!! CTAAGGTTTCAATCATTTTA+GGG + chr1_2:10411417-10411436 Msa0055440:intron 25.0%
!! CAATGATTAGTTATAACCTA+TGG + chr1_2:10411486-10411505 Msa0055440:intron 25.0%
! TTCAAAACTCTGATTAAGAT+TGG - chr1_2:10412126-10412145 None:intergenic 25.0%
! TTCATATAGGCATTAATATC+AGG - chr1_2:10412218-10412237 None:intergenic 25.0%
! TGATATTAATGCCTATATGA+AGG + chr1_2:10412217-10412236 Msa0055440:CDS 25.0%
! GTAGTATTTGTGAAATTGTT+TGG + chr1_2:10412291-10412310 Msa0055440:intron 25.0%
!! AAATTGTTTGGGATAACTTA+TGG + chr1_2:10412303-10412322 Msa0055440:intron 25.0%
! AAGGATTCAAAACATAGTTT+AGG - chr1_2:10412518-10412537 None:intergenic 25.0%
! TTGAATCCTTATGTTTGAAA+TGG + chr1_2:10412528-10412547 Msa0055440:intron 25.0%
!! TTAACTATATTTGGTGAATC+TGG - chr1_2:10412681-10412700 None:intergenic 25.0%
!!! TTAACTTGTGAAACAAGAAA+AGG + chr1_2:10412697-10412716 Msa0055440:intron 25.0%
! TCAAATAGTTCATAAGTTTC+TGG - chr1_2:10413095-10413114 None:intergenic 25.0%
!! AACTCAAGTACATTTTCTTT+TGG - chr1_2:10413161-10413180 None:intergenic 25.0%
!!! CAAGAGACAATATTTTTCAA+AGG - chr1_2:10413272-10413291 None:intergenic 25.0%
! AAAAGATCAATGGCAATATT+GGG + chr1_2:10413349-10413368 Msa0055440:CDS 25.0%
! TGAAATTTAGACTTGTCAAA+TGG - chr1_2:10413476-10413495 None:intergenic 25.0%
! GTCTTGATTACAAAGAAATA+TGG + chr1_2:10413503-10413522 Msa0055440:CDS 25.0%
! GAAATATGGTATTAACAAGA+AGG + chr1_2:10413517-10413536 Msa0055440:CDS 25.0%
!! TGATAGTTATTGGTATTTTG+AGG - chr1_2:10414032-10414051 None:intergenic 25.0%
!! CATATGAAATTTTCTTAGCT+AGG + chr1_2:10414133-10414152 Msa0055440:intron 25.0%
!!! ACATTGTTATTTTGCATTAG+AGG + chr1_2:10414515-10414534 Msa0055440:intron 25.0%
! ATATTAAAAACAAAAGGGGT+TGG - chr1_2:10414646-10414665 None:intergenic 25.0%
! TGATACACAATTATGTGTTA+GGG - chr1_2:10414968-10414987 None:intergenic 25.0%
! ATGATACACAATTATGTGTT+AGG - chr1_2:10414969-10414988 None:intergenic 25.0%
! CAAGTACATTATCTATATCT+TGG - chr1_2:10415126-10415145 None:intergenic 25.0%
! TGAAAAATCAGCTACAAATA+CGG + chr1_2:10415193-10415212 Msa0055440:intron 25.0%
! TCTGATATCATCAAAAGTTA+GGG - chr1_2:10415291-10415310 None:intergenic 25.0%
! ATCTGATATCATCAAAAGTT+AGG - chr1_2:10415292-10415311 None:intergenic 25.0%
! ACATAACAGACTTAAAAGTT+AGG - chr1_2:10415402-10415421 None:intergenic 25.0%
!! GTCTGTTATGTTGATTATAT+AGG + chr1_2:10415411-10415430 Msa0055440:intron 25.0%
!! AAAACTAGTGGATATATTGA+AGG + chr1_2:10415577-10415596 Msa0055440:CDS 25.0%
! GAATCAAATATGTCAATACT+CGG - chr1_2:10416176-10416195 None:intergenic 25.0%
! ACCTAGTGAATTAATACTAT+AGG + chr1_2:10416437-10416456 Msa0055440:intron 25.0%
! TTAATACTATAGGCTATTCA+AGG + chr1_2:10416447-10416466 Msa0055440:intron 25.0%
! AGTTTAGTATCAAGATCTTT+CGG - chr1_2:10416700-10416719 None:intergenic 25.0%
!! TTGTTTATTTCTCCTGAAAA+GGG - chr1_2:10416725-10416744 None:intergenic 25.0%
!! ATTGTTTATTTCTCCTGAAA+AGG - chr1_2:10416726-10416745 None:intergenic 25.0%
! GGAAACAACATTTATCATAT+TGG + chr1_2:10416845-10416864 Msa0055440:CDS 25.0%
! AACAACATTTATCATATTGG+AGG + chr1_2:10416848-10416867 Msa0055440:CDS 25.0%
! CAAGATTTATTCAATGCAAT+GGG + chr1_2:10417072-10417091 Msa0055440:CDS 25.0%
! AAGATTTATTCAATGCAATG+GGG + chr1_2:10417073-10417092 Msa0055440:CDS 25.0%
! ATGAATCGTTAAGTAGATAT+TGG + chr1_2:10417286-10417305 Msa0055440:intron 25.0%
! TTAAACCGTTTATCTAAACA+TGG + chr1_2:10418030-10418049 Msa0055440:intron 25.0%
! TTAGACCATGTTTAGATAAA+CGG - chr1_2:10418038-10418057 None:intergenic 25.0%
!!! GAATTTGTTAGGAATTACTT+TGG + chr1_2:10418206-10418225 Msa0055440:CDS 25.0%
!! TCTATATTCTTTAGGAAACA+TGG + chr1_2:10418374-10418393 Msa0055440:three_prime_UTR 25.0%
! GAACAATTAAGCTAATTACT+AGG + chr1_2:10418483-10418502 Msa0055440:three_prime_UTR 25.0%
AAGAAAAATGTAGAGAGCAA+AGG + chr1_2:10410528-10410547 Msa0055440:CDS 30.0%
AAAGTTCTTGTTGAAACTCA+AGG + chr1_2:10410650-10410669 Msa0055440:CDS 30.0%
CATATACTTCAGAATGTTAG+TGG + chr1_2:10411179-10411198 Msa0055440:CDS 30.0%
TTGTCTTTAATTCACCTTCT+AGG - chr1_2:10411215-10411234 None:intergenic 30.0%
!!! TCAATCATTTTAGGGTAGAA+AGG + chr1_2:10411425-10411444 Msa0055440:intron 30.0%
!!! CAATCATTTTAGGGTAGAAA+GGG + chr1_2:10411426-10411445 Msa0055440:intron 30.0%
!!! AATCATTTTAGGGTAGAAAG+GGG + chr1_2:10411427-10411446 Msa0055440:intron 30.0%
ACCGAATATAATCACATTGT+CGG + chr1_2:10411577-10411596 Msa0055440:intron 30.0%
ACCGACAATGTGATTATATT+CGG - chr1_2:10411581-10411600 None:intergenic 30.0%
ACAAGACACGTAAACAATTT+CGG + chr1_2:10411620-10411639 Msa0055440:intron 30.0%
!! TTCGGACATTGATTTGAAAT+TGG + chr1_2:10411638-10411657 Msa0055440:intron 30.0%
! AGTATTTCAAGTGTCTGAAA+TGG - chr1_2:10411769-10411788 None:intergenic 30.0%
TTCCATGTGGTAAATTTCTA+CGG - chr1_2:10411810-10411829 None:intergenic 30.0%
TGTCAAATTCAAATTCCATG+TGG - chr1_2:10411823-10411842 None:intergenic 30.0%
AGTCAACATGATAATCACAT+TGG + chr1_2:10411984-10412003 Msa0055440:CDS 30.0%
CAATTTCACAAATACTACGT+CGG - chr1_2:10412289-10412308 None:intergenic 30.0%
ATTATACGGAAATGAGCTTA+TGG - chr1_2:10412347-10412366 None:intergenic 30.0%
CTTAGACATAAGCACTTATA+TGG + chr1_2:10412457-10412476 Msa0055440:intron 30.0%
TGTTCACCATTTCAAACATA+AGG - chr1_2:10412537-10412556 None:intergenic 30.0%
GTAATTCACTCAAAATATGC+AGG + chr1_2:10412594-10412613 Msa0055440:intron 30.0%
AATCTGCAACATATCACAAA+GGG - chr1_2:10412734-10412753 None:intergenic 30.0%
AAATCTGCAACATATCACAA+AGG - chr1_2:10412735-10412754 None:intergenic 30.0%
! TTGTGATATGTTGCAGATTT+TGG + chr1_2:10412735-10412754 Msa0055440:intron 30.0%
! TGTGATATGTTGCAGATTTT+GGG + chr1_2:10412736-10412755 Msa0055440:intron 30.0%
CAGGTATAATCTATTTGACA+AGG + chr1_2:10412839-10412858 Msa0055440:intron 30.0%
TTCATGGATGAGATATCAAA+TGG + chr1_2:10412972-10412991 Msa0055440:CDS 30.0%
TGACATCAAGAAAAGATCAA+TGG + chr1_2:10413339-10413358 Msa0055440:CDS 30.0%
GAAAAGATCAATGGCAATAT+TGG + chr1_2:10413348-10413367 Msa0055440:CDS 30.0%
TTGACAGTGACAAAGTTATA+AGG - chr1_2:10413389-10413408 None:intergenic 30.0%
TTATAACTTTGTCACTGTCA+AGG + chr1_2:10413388-10413407 Msa0055440:CDS 30.0%
TTTAGACTTGTCAAATGGAT+CGG - chr1_2:10413471-10413490 None:intergenic 30.0%
AATGGTAGAATGATACATCT+TGG - chr1_2:10413845-10413864 None:intergenic 30.0%
TCTCTTTGCTTGTAAAAGAT+AGG - chr1_2:10413964-10413983 None:intergenic 30.0%
! ATCTTCTTTTCTATCCTTCA+TGG + chr1_2:10413983-10414002 Msa0055440:CDS 30.0%
! TCTTCTTTTCTATCCTTCAT+GGG + chr1_2:10413984-10414003 Msa0055440:CDS 30.0%
GCAACTTCAATGATAGTTAT+TGG - chr1_2:10414042-10414061 None:intergenic 30.0%
! TATCATTGAAGTTGCCATTT+GGG + chr1_2:10414047-10414066 Msa0055440:CDS 30.0%
AATATTTGGATCAAAGCCAA+TGG - chr1_2:10414091-10414110 None:intergenic 30.0%
!! ATTGGCTTTGATCCAAATAT+TGG + chr1_2:10414090-10414109 Msa0055440:CDS 30.0%
AGCCTAATGATAAATCTGAT+TGG + chr1_2:10414177-10414196 Msa0055440:intron 30.0%
TGCCAATCAGATTTATCATT+AGG - chr1_2:10414182-10414201 None:intergenic 30.0%
TAATGATAAATCTGATTGGC+AGG + chr1_2:10414181-10414200 Msa0055440:intron 30.0%
TTATAGTGTGACTCTAAACT+TGG + chr1_2:10414372-10414391 Msa0055440:intron 30.0%
ATGTGCATAAATGGTTTCTT+TGG + chr1_2:10414538-10414557 Msa0055440:CDS 30.0%
TGTGCATAAATGGTTTCTTT+GGG + chr1_2:10414539-10414558 Msa0055440:CDS 30.0%
ATAGCTGTGAATGAATTTCT+TGG + chr1_2:10414600-10414619 Msa0055440:CDS 30.0%
AAAATTTCCTTGAATGTTGC+AGG + chr1_2:10414732-10414751 Msa0055440:intron 30.0%
! TATTGGTATTGGATTGGAAT+TGG + chr1_2:10414823-10414842 Msa0055440:CDS 30.0%
!! ATTTAATTTTCTCTTCGCGT+TGG + chr1_2:10414870-10414889 Msa0055440:CDS 30.0%
ATATAGGGAATGAAAAACCA+AGG + chr1_2:10415427-10415446 Msa0055440:intron 30.0%
!!! ACTTTAATGGATGTTTTAGC+TGG + chr1_2:10415550-10415569 Msa0055440:CDS 30.0%
!! TTTTTGATTCTTTGGATAGC+CGG - chr1_2:10415617-10415636 None:intergenic 30.0%
!! GCGAATGATTTTTGATTCTT+TGG - chr1_2:10415625-10415644 None:intergenic 30.0%
! AATCTTTGCTATATTCTGCA+TGG + chr1_2:10415704-10415723 Msa0055440:CDS 30.0%
GAAACACTAAGCCTTAAAAT+AGG + chr1_2:10415798-10415817 Msa0055440:intron 30.0%
GATGTTTATTGAGGAAGTTA+TGG + chr1_2:10415914-10415933 Msa0055440:intron 30.0%
GAATCCATCGATAATATTCA+TGG + chr1_2:10416046-10416065 Msa0055440:CDS 30.0%
TCATCCATGAATATTATCGA+TGG - chr1_2:10416053-10416072 None:intergenic 30.0%
CATATTTGATTCCTTTGATG+AGG + chr1_2:10416184-10416203 Msa0055440:CDS 30.0%
GCCTATAGTATTAATTCACT+AGG - chr1_2:10416441-10416460 None:intergenic 30.0%
TTATACCCATCTTTGATCTT+AGG - chr1_2:10416477-10416496 None:intergenic 30.0%
ACAAAAACTCTGAACTACAT+CGG + chr1_2:10416571-10416590 Msa0055440:CDS 30.0%
! ATACTAAACTTTCCCTTTTC+AGG + chr1_2:10416710-10416729 Msa0055440:intron 30.0%
!! AGATCTTTTGAACTTTGAGA+AGG - chr1_2:10416769-10416788 None:intergenic 30.0%
CTCCTATTTACTATAATGAC+CGG + chr1_2:10416895-10416914 Msa0055440:CDS 30.0%
TACCGGTCATTATAGTAAAT+AGG - chr1_2:10416900-10416919 None:intergenic 30.0%
ATAATGACCGGTATATTGTT+TGG + chr1_2:10416907-10416926 Msa0055440:CDS 30.0%
! TATTGTTTGGCCTGATATTT+TGG + chr1_2:10416920-10416939 Msa0055440:CDS 30.0%
! ATTGTTTGGCCTGATATTTT+GGG + chr1_2:10416921-10416940 Msa0055440:CDS 30.0%
GCAAGATTTATTCAATGCAA+TGG + chr1_2:10417071-10417090 Msa0055440:CDS 30.0%
CAACGATTGATCACAAAATT+CGG + chr1_2:10417380-10417399 Msa0055440:intron 30.0%
AATATGAGTCATACACAACA+TGG + chr1_2:10417548-10417567 Msa0055440:intron 30.0%
TCGATAAACGAATCATTCAA+TGG + chr1_2:10417615-10417634 Msa0055440:intron 30.0%
ATCATAGTATATGCCATGAT+GGG + chr1_2:10417752-10417771 Msa0055440:CDS 30.0%
ATACTATGGTATGATGACAA+TGG + chr1_2:10417844-10417863 Msa0055440:CDS 30.0%
TGTTATTAGGAAAGGTTGTT+AGG - chr1_2:10417972-10417991 None:intergenic 30.0%
! AAAGGGTTGAAGAATTTGTT+AGG + chr1_2:10418195-10418214 Msa0055440:CDS 30.0%
!!! TGGAGTGATTTCATCTTTTT+TGG - chr1_2:10418331-10418350 None:intergenic 30.0%
!! AAGATTTTGAAGAGAAGCAT+TGG - chr1_2:10418351-10418370 None:intergenic 30.0%
GTTCTCATATTCTCAATGTA+AGG + chr1_2:10418396-10418415 Msa0055440:three_prime_UTR 30.0%
AGGCATAATTCTTTCAGTAA+AGG + chr1_2:10418461-10418480 Msa0055440:three_prime_UTR 30.0%
TTGAGAAAACATCCATGCAA+TGG - chr1_2:10410434-10410453 None:intergenic 35.0%
GTTGAAACTCAAGGAAAGAA+TGG + chr1_2:10410659-10410678 Msa0055440:CDS 35.0%
!!! GTTTTTTATCTGTGAGGTGT+CGG + chr1_2:10410750-10410769 Msa0055440:intron 35.0%
TTTCGGCCCTTAAAGTTATA+AGG - chr1_2:10410795-10410814 None:intergenic 35.0%
GAAGTCAATGCTTCATCAAT+AGG - chr1_2:10410843-10410862 None:intergenic 35.0%
AAGCACAAGTTTATGTTGGA+AGG + chr1_2:10410974-10410993 Msa0055440:CDS 35.0%
CTTCTTTGTGAATGTGATAG+AGG + chr1_2:10411020-10411039 Msa0055440:CDS 35.0%
! TGTAACTGTTTCTTTGGACT+TGG - chr1_2:10411161-10411180 None:intergenic 35.0%
!! TGTAGGATGACATTGCTTTT+AGG + chr1_2:10411318-10411337 Msa0055440:intron 35.0%
!! GTAGGATGACATTGCTTTTA+GGG + chr1_2:10411319-10411338 Msa0055440:intron 35.0%
TGGAAAGACCACTTTATTGT+TGG + chr1_2:10411353-10411372 Msa0055440:CDS 35.0%
!!! ATCATTTTAGGGTAGAAAGG+GGG + chr1_2:10411428-10411447 Msa0055440:intron 35.0%
TACCTTTGATTCAGATCAGA+TGG + chr1_2:10411704-10411723 Msa0055440:intron 35.0%
TACCATCTGATCTGAATCAA+AGG - chr1_2:10411709-10411728 None:intergenic 35.0%
AAACTGTGTGATGCATTTAC+CGG + chr1_2:10411737-10411756 Msa0055440:intron 35.0%
GTGGTAAATTTCTACGGAAA+AGG - chr1_2:10411804-10411823 None:intergenic 35.0%
TTCCGTAGAAATTTACCACA+TGG + chr1_2:10411805-10411824 Msa0055440:intron 35.0%
TCTGGAAGAGTAACATACAA+TGG + chr1_2:10411915-10411934 Msa0055440:CDS 35.0%
CTGGAAGAGTAACATACAAT+GGG + chr1_2:10411916-10411935 Msa0055440:CDS 35.0%
AGAGTAACATACAATGGGAA+AGG + chr1_2:10411921-10411940 Msa0055440:CDS 35.0%
ACATAAGCTGATGTTCTTTG+TGG - chr1_2:10411963-10411982 None:intergenic 35.0%
TAGGCATTAATATCAGGATC+TGG - chr1_2:10412212-10412231 None:intergenic 35.0%
GGAGAGCTTATGGAATTATA+CGG - chr1_2:10412361-10412380 None:intergenic 35.0%
! GGTCATTGACTACATTCTTA+AGG + chr1_2:10412648-10412667 Msa0055440:CDS 35.0%
ATCTGCAACATATCACAAAG+GGG - chr1_2:10412733-10412752 None:intergenic 35.0%
! GTGATATGTTGCAGATTTTG+GGG + chr1_2:10412737-10412756 Msa0055440:intron 35.0%
CTGAGATACCTCTTATCATT+TGG - chr1_2:10412795-10412814 None:intergenic 35.0%
!! CAAATGATAAGAGGTATCTC+AGG + chr1_2:10412793-10412812 Msa0055440:CDS 35.0%
!! ACCTATAAAGGTGTTGTTCA+TGG + chr1_2:10412956-10412975 Msa0055440:CDS 35.0%
TCCATGAACAACACCTTTAT+AGG - chr1_2:10412960-10412979 None:intergenic 35.0%
GGATGAGATATCAAATGGTT+TGG + chr1_2:10412977-10412996 Msa0055440:CDS 35.0%
GATATACTACTTCTCACTGA+TGG + chr1_2:10413116-10413135 Msa0055440:CDS 35.0%
GATGGACAAATTGTGTATCA+AGG + chr1_2:10413134-10413153 Msa0055440:CDS 35.0%
!!! CTTGAGTTTTTTGAATCGAC+CGG + chr1_2:10413173-10413192 Msa0055440:CDS 35.0%
TTCAAGTGTCCAGAAAGAAA+AGG + chr1_2:10413197-10413216 Msa0055440:CDS 35.0%
GCCTTCGAATTATTTCATGT+AGG + chr1_2:10413422-10413441 Msa0055440:CDS 35.0%
GCCTACATGAAATAATTCGA+AGG - chr1_2:10413426-10413445 None:intergenic 35.0%
TTTCATGTAGGCAAACAACT+TGG + chr1_2:10413434-10413453 Msa0055440:CDS 35.0%
! CCTTTACTCGATCAGATTTT+TGG - chr1_2:10413662-10413681 None:intergenic 35.0%
CCAAAAATCTGATCGAGTAA+AGG + chr1_2:10413659-10413678 Msa0055440:intron 35.0%
GCTAAATAAGTAAGCTGAGA+AGG - chr1_2:10413793-10413812 None:intergenic 35.0%
TAGAAATAATGTCGTCGTCA+AGG - chr1_2:10413818-10413837 None:intergenic 35.0%
GATGTATCATTCTACCATTG+AGG + chr1_2:10413846-10413865 Msa0055440:CDS 35.0%
!! ATTGGTATTTTGAGGATCCA+TGG - chr1_2:10414024-10414043 None:intergenic 35.0%
CTATCATTGAAGTTGCCATT+TGG + chr1_2:10414046-10414065 Msa0055440:CDS 35.0%
GCTTTGATCCAAATATTGGA+AGG + chr1_2:10414094-10414113 Msa0055440:CDS 35.0%
TCACTGTACCTTCCAATATT+TGG - chr1_2:10414105-10414124 None:intergenic 35.0%
!!! CAGGTTTTTTAAACAGTCGT+TGG + chr1_2:10414200-10414219 Msa0055440:intron 35.0%
AGTCCTATGCATTAATCAGA+TGG + chr1_2:10414224-10414243 Msa0055440:CDS 35.0%
ATTAGGAAGGGATATTGTAG+TGG + chr1_2:10414275-10414294 Msa0055440:CDS 35.0%
ATTGTAGTGGCAAACACATT+TGG + chr1_2:10414288-10414307 Msa0055440:CDS 35.0%
!!! ACTACTTGCTGTTACTGTTT+TGG + chr1_2:10414320-10414339 Msa0055440:CDS 35.0%
!!! CTACTTGCTGTTACTGTTTT+GGG + chr1_2:10414321-10414340 Msa0055440:CDS 35.0%
!! GGAGGATTTGTTATTTCAAG+AGG + chr1_2:10414342-10414361 Msa0055440:CDS 35.0%
CATTAGAGGATGTGCATAAA+TGG + chr1_2:10414529-10414548 Msa0055440:intron 35.0%
GTGCATAAATGGTTTCTTTG+GGG + chr1_2:10414540-10414559 Msa0055440:CDS 35.0%
!! AATGGTTTCTTTGGGGTTAT+TGG + chr1_2:10414547-10414566 Msa0055440:CDS 35.0%
! GCATTTTGTCCATACATCAA+TGG - chr1_2:10414579-10414598 None:intergenic 35.0%
GTGAATGAATTTCTTGGACA+TGG + chr1_2:10414606-10414625 Msa0055440:CDS 35.0%
ATGAATTTCTTGGACATGGT+TGG + chr1_2:10414610-10414629 Msa0055440:CDS 35.0%
ATAGGCGATTCATTGATCTT+TGG + chr1_2:10414689-10414708 Msa0055440:intron 35.0%
CCAATGTTTCATTGGAACTA+GGG - chr1_2:10414762-10414781 None:intergenic 35.0%
CCTAGTTCCAATGAAACATT+GGG + chr1_2:10414760-10414779 Msa0055440:CDS 35.0%
! GATTTTTCCCTCAAGCTTAT+TGG + chr1_2:10414806-10414825 Msa0055440:CDS 35.0%
TCCAATACCAATAAGCTTGA+GGG - chr1_2:10414816-10414835 None:intergenic 35.0%
ATCCAATACCAATAAGCTTG+AGG - chr1_2:10414817-10414836 None:intergenic 35.0%
! CAAGCTTATTGGTATTGGAT+TGG + chr1_2:10414817-10414836 Msa0055440:CDS 35.0%
! ATTGGAATTGGAGCTTTGAT+TGG + chr1_2:10414835-10414854 Msa0055440:CDS 35.0%
TCTCTCTTGCAATTTCTCTT+GGG - chr1_2:10415036-10415055 None:intergenic 35.0%
TTCTCTCTTGCAATTTCTCT+TGG - chr1_2:10415037-10415056 None:intergenic 35.0%
TCATCAAAAGTTAGGGATAG+AGG - chr1_2:10415284-10415303 None:intergenic 35.0%
! AAGATCATAGTGGGGAAAAA+AGG + chr1_2:10415351-10415370 Msa0055440:intron 35.0%
TGCTGGAAAGACTACTTTAA+TGG + chr1_2:10415537-10415556 Msa0055440:CDS 35.0%
TTAGCTGGAAGAAAAACTAG+TGG + chr1_2:10415565-10415584 Msa0055440:CDS 35.0%
GAAGGAAACATTACAGTATC+CGG + chr1_2:10415595-10415614 Msa0055440:CDS 35.0%
AAAATCATTCGCTCGCATAT+CGG + chr1_2:10415633-10415652 Msa0055440:CDS 35.0%
TATTCACTCACCCAATGTTA+CGG + chr1_2:10415675-10415694 Msa0055440:CDS 35.0%
AGTTGATCATGCAACTAGAA+AGG + chr1_2:10415744-10415763 Msa0055440:CDS 35.0%
TGAGATGCAGATGTTTATTG+AGG + chr1_2:10415905-10415924 Msa0055440:intron 35.0%
!! TCATTAAGAGAAGCACTTGT+TGG + chr1_2:10415954-10415973 Msa0055440:CDS 35.0%
CAATTGTAATGCGAACAGTA+AGG + chr1_2:10416105-10416124 Msa0055440:CDS 35.0%
GAGAATACTTACCTCATCAA+AGG - chr1_2:10416198-10416217 None:intergenic 35.0%
GAGTTCCTAAGATCAAAGAT+GGG + chr1_2:10416469-10416488 Msa0055440:CDS 35.0%
ATGTTGGAAATTACAACAGC+CGG + chr1_2:10416510-10416529 Msa0055440:CDS 35.0%
! CTTAAGATTTGCCTCTTTTC+CGG - chr1_2:10416532-10416551 None:intergenic 35.0%
TTAGTATCAAGATCTTTCGG+CGG - chr1_2:10416697-10416716 None:intergenic 35.0%
!! CACAATGCATAGCTTGTTTA+TGG + chr1_2:10416824-10416843 Msa0055440:CDS 35.0%
TATCAGGCCAAACAATATAC+CGG - chr1_2:10416917-10416936 None:intergenic 35.0%
! TTGTTTGGCCTGATATTTTG+GGG + chr1_2:10416922-10416941 Msa0055440:CDS 35.0%
GTTCTCTCAATTGCTACTAT+TGG - chr1_2:10417153-10417172 None:intergenic 35.0%
TTCAATGGAAAGAGTTGTCA+AGG + chr1_2:10417630-10417649 Msa0055440:intron 35.0%
TTGGTTCAAGCTGTTGTATA+TGG + chr1_2:10417728-10417747 Msa0055440:CDS 35.0%
TGGTTCAAGCTGTTGTATAT+GGG + chr1_2:10417729-10417748 Msa0055440:CDS 35.0%
GATCATAGTATATGCCATGA+TGG + chr1_2:10417751-10417770 Msa0055440:CDS 35.0%
! AACATGTGGATTTGGAGTTA+TGG - chr1_2:10417870-10417889 None:intergenic 35.0%
GAATAATGAAGCCTGAGAAA+AGG - chr1_2:10417931-10417950 None:intergenic 35.0%
TAGGTGTAACTCACAGATAA+GGG - chr1_2:10417953-10417972 None:intergenic 35.0%
TTAGGTGTAACTCACAGATA+AGG - chr1_2:10417954-10417973 None:intergenic 35.0%
AATGGCAGAGAATACCAATA+TGG + chr1_2:10418075-10418094 Msa0055440:intron 35.0%
! GAATACCAATATGGTGGAAA+TGG + chr1_2:10418084-10418103 Msa0055440:CDS 35.0%
TAGTACCATTTCCACCATAT+TGG - chr1_2:10418092-10418111 None:intergenic 35.0%
! TATGGTGGAAATGGTACTAT+TGG + chr1_2:10418093-10418112 Msa0055440:CDS 35.0%
GTTCATGTTGTGTCCATATT+GGG - chr1_2:10418159-10418178 None:intergenic 35.0%
TGTTCATGTTGTGTCCATAT+TGG - chr1_2:10418160-10418179 None:intergenic 35.0%
AACATGAACACACTTGACAA+TGG + chr1_2:10418170-10418189 Msa0055440:CDS 35.0%
TTTGCACTTATCTTCACCTT+TGG + chr1_2:10418287-10418306 Msa0055440:CDS 35.0%
GTTGAATGCTTTGATACCAA+AGG - chr1_2:10418306-10418325 None:intergenic 35.0%
TGAGGTTCTTCATTCATGTA+TGG - chr1_2:10418434-10418453 None:intergenic 35.0%
ATGAAGAACCTCATGTAACT+AGG + chr1_2:10418441-10418460 Msa0055440:three_prime_UTR 35.0%
GAATTATGCCTAGTTACATG+AGG - chr1_2:10418452-10418471 None:intergenic 35.0%
AGAGGAGTGACACTAAAACA+TGG + chr1_2:10410403-10410422 Msa0055440:CDS 40.0%
AACATGGAAGAACCATTGCA+TGG + chr1_2:10410419-10410438 Msa0055440:CDS 40.0%
ATCTGAACGTGAAGATGATG+AGG + chr1_2:10410455-10410474 Msa0055440:CDS 40.0%
GAGAGCAAAGGAGAAGAAAA+AGG + chr1_2:10410540-10410559 Msa0055440:CDS 40.0%
AACTCAAGGAAAGAATGGAC+AGG + chr1_2:10410664-10410683 Msa0055440:CDS 40.0%
AACTAAACCTTGCACAGAGT+TGG + chr1_2:10410904-10410923 Msa0055440:intron 40.0%
! GTGGAAGCACAAGTTTATGT+TGG + chr1_2:10410970-10410989 Msa0055440:CDS 40.0%
GTGGAATCATAAAGCCTAGA+AGG + chr1_2:10411198-10411217 Msa0055440:CDS 40.0%
GACCACTTTATTGTTGGCAT+TGG + chr1_2:10411359-10411378 Msa0055440:CDS 40.0%
AGCCAATGCCAACAATAAAG+TGG - chr1_2:10411364-10411383 None:intergenic 40.0%
!! ACTTTATTGTTGGCATTGGC+TGG + chr1_2:10411363-10411382 Msa0055440:CDS 40.0%
!! CTTTATTGTTGGCATTGGCT+GGG + chr1_2:10411364-10411383 Msa0055440:CDS 40.0%
GAGACTTGGCAAAGATTTGA+AGG + chr1_2:10411386-10411405 Msa0055440:CDS 40.0%
!!! TCATTTTAGGGTAGAAAGGG+GGG + chr1_2:10411429-10411448 Msa0055440:intron 40.0%
TGTATGTGTCAGTGATCCAT+AGG - chr1_2:10411505-10411524 None:intergenic 40.0%
! GTGTCTGAAATGGATTCATC+CGG - chr1_2:10411759-10411778 None:intergenic 40.0%
GTGATGAAACTTCAGCAATC+TGG + chr1_2:10411897-10411916 Msa0055440:intron 40.0%
CTTTCTCAGCAAGATGTCAA+GGG + chr1_2:10412033-10412052 Msa0055440:CDS 40.0%
TTTCTCAGCAAGATGTCAAG+GGG + chr1_2:10412034-10412053 Msa0055440:CDS 40.0%
CAAGGGGTTGGACAAAATTA+CGG + chr1_2:10412050-10412069 Msa0055440:CDS 40.0%
TGAACTGCTGAGAAAAGAGA+AGG + chr1_2:10412172-10412191 Msa0055440:CDS 40.0%
TGAGCTTATGGACATGTCAT+AGG - chr1_2:10412335-10412354 None:intergenic 40.0%
!! GCTGTTTTCATAAGCTATCG+TGG - chr1_2:10412382-10412401 None:intergenic 40.0%
! TGATGTTTGTGCTGACACAA+TGG + chr1_2:10412762-10412781 Msa0055440:CDS 40.0%
GTAGGAGACCAAATGATAAG+AGG + chr1_2:10412784-10412803 Msa0055440:CDS 40.0%
!! ATGATAAGAGGTATCTCAGG+TGG + chr1_2:10412796-10412815 Msa0055440:CDS 40.0%
! ATTTTGTGAAGGTGAGATGC+TGG + chr1_2:10412929-10412948 Msa0055440:intron 40.0%
!! AGTTCATAAGTTTCTGGTGC+TGG - chr1_2:10413089-10413108 None:intergenic 40.0%
TCTTTCTGGACACTTGAAAC+CGG - chr1_2:10413195-10413214 None:intergenic 40.0%
TTTCCCTAACGCAATGCAAT+AGG + chr1_2:10413316-10413335 Msa0055440:intron 40.0%
TCACCTATTGCATTGCGTTA+GGG - chr1_2:10413322-10413341 None:intergenic 40.0%
TTAACAAGAAGGAGCTGCTA+AGG + chr1_2:10413528-10413547 Msa0055440:CDS 40.0%
TAACAAGAAGGAGCTGCTAA+GGG + chr1_2:10413529-10413548 Msa0055440:CDS 40.0%
GAAATTTGGACTCACTTGTG+TGG - chr1_2:10413615-10413634 None:intergenic 40.0%
! TTTTATGGCATAACTGCACG+AGG - chr1_2:10413688-10413707 None:intergenic 40.0%
GTATGTTTGTGCATCCTCAA+TGG - chr1_2:10413863-10413882 None:intergenic 40.0%
TGAGGATGCACAAACATACA+TGG + chr1_2:10413864-10413883 Msa0055440:CDS 40.0%
GAGGATGCACAAACATACAT+GGG + chr1_2:10413865-10413884 Msa0055440:CDS 40.0%
GTCACAGTAGCAATGTTCAA+TGG + chr1_2:10413904-10413923 Msa0055440:CDS 40.0%
GTAAGAGATGCATTCCCAAA+TGG - chr1_2:10414064-10414083 None:intergenic 40.0%
ACGCCATCTGATTAATGCAT+AGG - chr1_2:10414230-10414249 None:intergenic 40.0%
! GTCTGCGTTATTTCGGTTTA+TGG + chr1_2:10414248-10414267 Msa0055440:CDS 40.0%
TTTCGGTTTATGGCAGCATT+AGG + chr1_2:10414258-10414277 Msa0055440:CDS 40.0%
GTTTATGGCAGCATTAGGAA+GGG + chr1_2:10414263-10414282 Msa0055440:CDS 40.0%
CCCTAGTTCCAATGAAACAT+TGG + chr1_2:10414759-10414778 Msa0055440:CDS 40.0%
CCCAATGTTTCATTGGAACT+AGG - chr1_2:10414763-10414782 None:intergenic 40.0%
CGATACTCCCAATGTTTCAT+TGG - chr1_2:10414770-10414789 None:intergenic 40.0%
! GTATCGATACTGAAATCTCG+CGG + chr1_2:10414784-10414803 Msa0055440:CDS 40.0%
TCCCTCAAGCTTATTGGTAT+TGG + chr1_2:10414812-10414831 Msa0055440:CDS 40.0%
TCATTGCTCGAAATGAGAGA+CGG - chr1_2:10414926-10414945 None:intergenic 40.0%
GCATTCAGAAAAGATCAAGC+AGG + chr1_2:10415005-10415024 Msa0055440:intron 40.0%
GAAAACAAAGCTAGCAGTAG+TGG + chr1_2:10415230-10415249 Msa0055440:CDS 40.0%
GTTAGGGATAGAGGTTGAAA+AGG - chr1_2:10415275-10415294 None:intergenic 40.0%
ATATTCTGTTGACATGCCAC+AGG + chr1_2:10415310-10415329 Msa0055440:CDS 40.0%
! CATAGTGGGGAAAAAAGGAA+TGG + chr1_2:10415356-10415375 Msa0055440:intron 40.0%
! GAACGTCTCGAACTTTTGAA+GGG + chr1_2:10415460-10415479 Msa0055440:CDS 40.0%
!!! GAACTTTTGAAGGGTGTTAG+TGG + chr1_2:10415469-10415488 Msa0055440:CDS 40.0%
ATCAAAGCTGTTAGTACTCC+AGG - chr1_2:10415505-10415524 None:intergenic 40.0%
! TGGAGTACTAACAGCTTTGA+TGG + chr1_2:10415504-10415523 Msa0055440:CDS 40.0%
! GGAGTACTAACAGCTTTGAT+GGG + chr1_2:10415505-10415524 Msa0055440:CDS 40.0%
AAATCATTCGCTCGCATATC+GGG + chr1_2:10415634-10415653 Msa0055440:CDS 40.0%
GATTCGTAGACCGTAACATT+GGG - chr1_2:10415688-10415707 None:intergenic 40.0%
AGATTCGTAGACCGTAACAT+TGG - chr1_2:10415689-10415708 None:intergenic 40.0%
CTAGTTGCATGATCAACTTC+AGG - chr1_2:10415742-10415761 None:intergenic 40.0%
TGTAAGTCTCTTGCGTTGTT+CGG - chr1_2:10416006-10416025 None:intergenic 40.0%
ATATGTCAATACTCGGCTGA+TGG - chr1_2:10416169-10416188 None:intergenic 40.0%
!! TCAGCTGCTTCTTCTGAAAT+TGG + chr1_2:10416284-10416303 Msa0055440:intron 40.0%
!! CAGCTGCTTCTTCTGAAATT+GGG + chr1_2:10416285-10416304 Msa0055440:intron 40.0%
CAGATATATGCTGGTCCAAT+AGG + chr1_2:10416315-10416334 Msa0055440:CDS 40.0%
!! CTCGAAGTACTGAATCAGAT+CGG - chr1_2:10416352-10416371 None:intergenic 40.0%
GGAGTTCCTAAGATCAAAGA+TGG + chr1_2:10416468-10416487 Msa0055440:CDS 40.0%
ATGGGTATAATCCTGCAACA+TGG + chr1_2:10416487-10416506 Msa0055440:CDS 40.0%
TAATCCTGCAACATGGATGT+TGG + chr1_2:10416494-10416513 Msa0055440:CDS 40.0%
ATTTCCAACATCCATGTTGC+AGG - chr1_2:10416501-10416520 None:intergenic 40.0%
AATTACAACAGCCGGAAAAG+AGG + chr1_2:10416518-10416537 Msa0055440:CDS 40.0%
CGGAAAAGAGGCAAATCTTA+AGG + chr1_2:10416530-10416549 Msa0055440:CDS 40.0%
TATGCTGCTGTTACCTTCAT+AGG + chr1_2:10417102-10417121 Msa0055440:CDS 40.0%
ATGCTGCTGTTACCTTCATA+GGG + chr1_2:10417103-10417122 Msa0055440:CDS 40.0%
ACCTTCATAGGGGTTGTAAA+TGG + chr1_2:10417114-10417133 Msa0055440:CDS 40.0%
ACCATTTACAACCCCTATGA+AGG - chr1_2:10417118-10417137 None:intergenic 40.0%
! AATACCTGTGCAAGAGCATA+TGG - chr1_2:10417219-10417238 None:intergenic 40.0%
AACAGCTTGAACCAAGATGT+GGG - chr1_2:10417723-10417742 None:intergenic 40.0%
! GGACAGCATCAAAAGTTTTG+TGG + chr1_2:10417783-10417802 Msa0055440:CDS 40.0%
GATAATATGCCAGCAACATG+TGG - chr1_2:10417884-10417903 None:intergenic 40.0%
CCATATTGCATAGAATGAGG+TGG - chr1_2:10417906-10417925 None:intergenic 40.0%
CCACCTCATTCTATGCAATA+TGG + chr1_2:10417903-10417922 Msa0055440:CDS 40.0%
GCACCATATTGCATAGAATG+AGG - chr1_2:10417909-10417928 None:intergenic 40.0%
ATTGGATTTGTCCTGTTGCA+TGG + chr1_2:10418111-10418130 Msa0055440:CDS 40.0%
ACACACTTGACAATGGTCAA+AGG + chr1_2:10418177-10418196 Msa0055440:CDS 40.0%
CACACTTGACAATGGTCAAA+GGG + chr1_2:10418178-10418197 Msa0055440:CDS 40.0%
!!! GGTTTTGAACATGACTTCCT+AGG + chr1_2:10418227-10418246 Msa0055440:CDS 40.0%
TTCAAGTCCAACTCTGTGCA+AGG - chr1_2:10410914-10410933 None:intergenic 45.0%
AAAGTGGTCTTTCCAGAACC+AGG - chr1_2:10411348-10411367 None:intergenic 45.0%
CTTGTGTCTGCATTAGTGTC+AGG - chr1_2:10411605-10411624 None:intergenic 45.0%
GCTTTCTCAGCAAGATGTCA+AGG + chr1_2:10412032-10412051 Msa0055440:CDS 45.0%
AAGCTATCGTGGAGAGCTTA+TGG - chr1_2:10412371-10412390 None:intergenic 45.0%
ATGCAGGAAGCAGCAATAGA+AGG + chr1_2:10412610-10412629 Msa0055440:intron 45.0%
CAATGACCACACTGTTCTGA+TGG - chr1_2:10412636-10412655 None:intergenic 45.0%
! GTTTGTGCTGACACAATGGT+AGG + chr1_2:10412766-10412785 Msa0055440:CDS 45.0%
GAGAAAAAGCGACTCACTAC+AGG + chr1_2:10412820-10412839 Msa0055440:CDS 45.0%
! GATGCTGGTTGGACCTATAA+AGG + chr1_2:10412944-10412963 Msa0055440:CDS 45.0%
! TCAGCAACGCCTTTTCTTTC+TGG - chr1_2:10413209-10413228 None:intergenic 45.0%
GTCACCTATTGCATTGCGTT+AGG - chr1_2:10413323-10413342 None:intergenic 45.0%
CAAACAACTTGGAGAAGAGC+TGG + chr1_2:10413445-10413464 Msa0055440:CDS 45.0%
GGAAGAGAATAAGCCCATGA+AGG - chr1_2:10414000-10414019 None:intergenic 45.0%
!! GGTATTTTGAGGATCCATGG+TGG - chr1_2:10414021-10414040 None:intergenic 45.0%
TGCATCTCTTACTACGCCAT+TGG + chr1_2:10414072-10414091 Msa0055440:CDS 45.0%
AGATGGCGTCTGCGTTATTT+CGG + chr1_2:10414241-10414260 Msa0055440:CDS 45.0%
GGTTTATGGCAGCATTAGGA+AGG + chr1_2:10414262-10414281 Msa0055440:CDS 45.0%
!!! CTTGCTGTTACTGTTTTGGG+AGG + chr1_2:10414324-10414343 Msa0055440:CDS 45.0%
TCTTGGACATGGTTGGAGAA+AGG + chr1_2:10414617-10414636 Msa0055440:CDS 45.0%
! GCTAGCAGTAGTGGAAGAAA+AGG + chr1_2:10415239-10415258 Msa0055440:CDS 45.0%
! CAGTAGTGGAAGAAAAGGCA+TGG + chr1_2:10415244-10415263 Msa0055440:CDS 45.0%
GAAAAACCAAGGAGTTTCCG+AGG + chr1_2:10415438-10415457 Msa0055440:CDS 45.0%
CAAAAGTTCGAGACGTTCCT+CGG - chr1_2:10415458-10415477 None:intergenic 45.0%
! GGAACGTCTCGAACTTTTGA+AGG + chr1_2:10415459-10415478 Msa0055440:CDS 45.0%
! GTTAGTGGTGCTTTTAGACC+TGG + chr1_2:10415484-10415503 Msa0055440:CDS 45.0%
! ACAGCTTTGATGGGTGTAAG+TGG + chr1_2:10415514-10415533 Msa0055440:CDS 45.0%
! GTTGAAAGTCCATTTTCGCC+TGG - chr1_2:10415984-10416003 None:intergenic 45.0%
TTCATGGATGAACCAACCTC+TGG + chr1_2:10416062-10416081 Msa0055440:CDS 45.0%
!! CTGCTTCTTCTGAAATTGGG+AGG + chr1_2:10416288-10416307 Msa0055440:CDS 45.0%
ACTGAATCAGATCGGAACAG+TGG - chr1_2:10416344-10416363 None:intergenic 45.0%
CGATCTGATTCAGTACTTCG+AGG + chr1_2:10416350-10416369 Msa0055440:CDS 45.0%
GAGAAGGAACACTAAGCTCT+TGG - chr1_2:10416753-10416772 None:intergenic 45.0%
TGCTGCTGTTACCTTCATAG+GGG + chr1_2:10417104-10417123 Msa0055440:CDS 45.0%
! TGCTACTATTGGTTGTACCG+AGG - chr1_2:10417142-10417161 None:intergenic 45.0%
TTCTACAGAGAAAGAGCTGC+AGG + chr1_2:10417177-10417196 Msa0055440:CDS 45.0%
TATGCCATATGCTCTTGCAC+AGG + chr1_2:10417212-10417231 Msa0055440:CDS 45.0%
! GTCTGAGACGTAGACACAAT+AGG - chr1_2:10417406-10417425 None:intergenic 45.0%
GAGTAGCCTCTCAAACTTAG+AGG - chr1_2:10417517-10417536 None:intergenic 45.0%
CATAGAACTTCCCCACATCT+TGG + chr1_2:10417709-10417728 Msa0055440:CDS 45.0%
ACAGCTTGAACCAAGATGTG+GGG - chr1_2:10417722-10417741 None:intergenic 45.0%
CAACAGCTTGAACCAAGATG+TGG - chr1_2:10417724-10417743 None:intergenic 45.0%
! ATGCCATGATGGGATTTGAG+TGG + chr1_2:10417762-10417781 Msa0055440:CDS 45.0%
TGTCCACTCAAATCCCATCA+TGG - chr1_2:10417768-10417787 None:intergenic 45.0%
ACTCCAAATCCACATGTTGC+TGG + chr1_2:10417872-10417891 Msa0055440:CDS 45.0%
ATGCCAGCAACATGTGGATT+TGG - chr1_2:10417878-10417897 None:intergenic 45.0%
! GCAATATGGTGCCTTTTCTC+AGG + chr1_2:10417917-10417936 Msa0055440:CDS 45.0%
GGCAGAGAATACCAATATGG+TGG + chr1_2:10418078-10418097 Msa0055440:intron 45.0%
TGCATGGACCTTGAATGGAT+TGG + chr1_2:10418127-10418146 Msa0055440:CDS 45.0%
GGAAGTCACCAATCCATTCA+AGG - chr1_2:10418138-10418157 None:intergenic 45.0%
! GGATTGGTGACTTCCCAATA+TGG + chr1_2:10418143-10418162 Msa0055440:CDS 45.0%
TGAACATGACTTCCTAGGAG+TGG + chr1_2:10418232-10418251 Msa0055440:CDS 45.0%
CAACAATTGCAACCACTCCT+AGG - chr1_2:10418247-10418266 None:intergenic 45.0%
AGGAGTGGTTGCAATTGTTG+TGG + chr1_2:10418247-10418266 Msa0055440:CDS 45.0%
!! ATTAATAATATTTCTTAATT+TGG + chr1_2:10410688-10410707 Msa0055440:intron 5.0%
!! TAAAAATATTAAAAACAAAA+GGG - chr1_2:10414651-10414670 None:intergenic 5.0%
!! ATAAAAATATTAAAAACAAA+AGG - chr1_2:10414652-10414671 None:intergenic 5.0%
!!! ACATTGCTTTTAGGGCCACC+TGG + chr1_2:10411327-10411346 Msa0055440:CDS 50.0%
TCAGCAAGATGTCAAGGGGT+TGG + chr1_2:10412038-10412057 Msa0055440:CDS 50.0%
AGAAGGCCATCAGAACAGTG+TGG + chr1_2:10412627-10412646 Msa0055440:CDS 50.0%
TGTGAAGGTGAGATGCTGGT+TGG + chr1_2:10412933-10412952 Msa0055440:intron 50.0%
GGGCTTATTCTCTTCCACCA+TGG + chr1_2:10414004-10414023 Msa0055440:CDS 50.0%
TGGTCGTCGCCATTGATGTA+TGG + chr1_2:10414567-10414586 Msa0055440:CDS 50.0%
GGGACAACCTGCAACATTCA+AGG - chr1_2:10414742-10414761 None:intergenic 50.0%
! TTGATGGGTGTAAGTGGTGC+TGG + chr1_2:10415520-10415539 Msa0055440:CDS 50.0%
! GAAGCACTTGTTGGATTGCC+AGG + chr1_2:10415963-10415982 Msa0055440:CDS 50.0%
GTTGGATTGCCAGGCGAAAA+TGG + chr1_2:10415972-10415991 Msa0055440:CDS 50.0%
CTAGCATCAAGTCCAGAGGT+TGG - chr1_2:10416077-10416096 None:intergenic 50.0%
TGCTCTAGCATCAAGTCCAG+AGG - chr1_2:10416081-10416100 None:intergenic 50.0%
GCGAACAGTAAGGAACACTG+TGG + chr1_2:10416115-10416134 Msa0055440:CDS 50.0%
GTAAGGAACACTGTGGACAC+AGG + chr1_2:10416122-10416141 Msa0055440:CDS 50.0%
!! CTGATGGATTGTGCACACCA+CGG - chr1_2:10416153-10416172 None:intergenic 50.0%
GGAGGTGAGCAGATATATGC+TGG + chr1_2:10416306-10416325 Msa0055440:CDS 50.0%
TCGGAACAGTGGTTGCCTAT+TGG - chr1_2:10416333-10416352 None:intergenic 50.0%
AGGGGTTGTAAATGGTGCCT+CGG + chr1_2:10417122-10417141 Msa0055440:CDS 50.0%
TCCGGTCCTCTAAGTTTGAG+AGG + chr1_2:10417508-10417527 Msa0055440:intron 50.0%
GCCTCTCAAACTTAGAGGAC+CGG - chr1_2:10417512-10417531 None:intergenic 50.0%
CCATTCAAGGTCCATGCAAC+AGG - chr1_2:10418125-10418144 None:intergenic 50.0%
CCTGTTGCATGGACCTTGAA+TGG + chr1_2:10418122-10418141 Msa0055440:CDS 50.0%
!! TCTGTGAGGTGTCGGTTCAG+TGG + chr1_2:10410758-10410777 Msa0055440:intron 55.0%
!!! CTTTTAGGGCCACCTGGTTC+TGG + chr1_2:10411333-10411352 Msa0055440:CDS 55.0%
GTGGTCTTTCCAGAACCAGG+TGG - chr1_2:10411345-10411364 None:intergenic 55.0%
!! TTGGCATTGGCTGGGAGACT+TGG + chr1_2:10411372-10411391 Msa0055440:CDS 55.0%
GACGTTCCTCGGAAACTCCT+TGG - chr1_2:10415447-10415466 None:intergenic 55.0%
!!! GGCCTGATATTTTGGGGCGT+TGG + chr1_2:10416928-10416947 Msa0055440:CDS 55.0%
CGCCAACGCCCCAAAATATC+AGG - chr1_2:10416933-10416952 None:intergenic 55.0%
TGTGGACACAGGACGTACCG+TGG + chr1_2:10416133-10416152 Msa0055440:CDS 60.0%
!! TTTGGGGCGTTGGCGCGAAA+AGG + chr1_2:10416938-10416957 Msa0055440:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 10410340 10418631 10410340 ID=Msa0055440;Name=Msa0055440
chr1_2 mRNA 10410340 10418631 10410340 ID=Msa0055440-mRNA-1;Parent=Msa0055440;Name=Msa0055440-mRNA-1;_AED=0.29;_eAED=0.29;_QI=59|0.86|0.75|1|1|1|24|291|1423
chr1_2 exon 10410340 10410685 10410340 ID=Msa0055440-mRNA-1:exon:3930;Parent=Msa0055440-mRNA-1
chr1_2 exon 10410921 10411041 10410921 ID=Msa0055440-mRNA-1:exon:3931;Parent=Msa0055440-mRNA-1
chr1_2 exon 10411131 10411219 10411131 ID=Msa0055440-mRNA-1:exon:3932;Parent=Msa0055440-mRNA-1
chr1_2 exon 10411323 10411407 10411323 ID=Msa0055440-mRNA-1:exon:3933;Parent=Msa0055440-mRNA-1
chr1_2 exon 10411912 10412071 10411912 ID=Msa0055440-mRNA-1:exon:3934;Parent=Msa0055440-mRNA-1
chr1_2 exon 10412162 10412238 10412162 ID=Msa0055440-mRNA-1:exon:3935;Parent=Msa0055440-mRNA-1
chr1_2 exon 10412616 10412669 10412616 ID=Msa0055440-mRNA-1:exon:3936;Parent=Msa0055440-mRNA-1
chr1_2 exon 10412751 10412841 10412751 ID=Msa0055440-mRNA-1:exon:3937;Parent=Msa0055440-mRNA-1
chr1_2 exon 10412940 10413241 10412940 ID=Msa0055440-mRNA-1:exon:3938;Parent=Msa0055440-mRNA-1
chr1_2 exon 10413338 10413619 10413338 ID=Msa0055440-mRNA-1:exon:3939;Parent=Msa0055440-mRNA-1
chr1_2 exon 10413799 10414115 10413799 ID=Msa0055440-mRNA-1:exon:3940;Parent=Msa0055440-mRNA-1
chr1_2 exon 10414203 10414363 10414203 ID=Msa0055440-mRNA-1:exon:3941;Parent=Msa0055440-mRNA-1
chr1_2 exon 10414535 10414638 10414535 ID=Msa0055440-mRNA-1:exon:3942;Parent=Msa0055440-mRNA-1
chr1_2 exon 10414754 10414910 10414754 ID=Msa0055440-mRNA-1:exon:3943;Parent=Msa0055440-mRNA-1
chr1_2 exon 10415006 10415107 10415006 ID=Msa0055440-mRNA-1:exon:3944;Parent=Msa0055440-mRNA-1
chr1_2 exon 10415204 10415331 10415204 ID=Msa0055440-mRNA-1:exon:3945;Parent=Msa0055440-mRNA-1
chr1_2 exon 10415433 10415765 10415433 ID=Msa0055440-mRNA-1:exon:3946;Parent=Msa0055440-mRNA-1
chr1_2 exon 10415915 10416205 10415915 ID=Msa0055440-mRNA-1:exon:3947;Parent=Msa0055440-mRNA-1
chr1_2 exon 10416288 10416371 10416288 ID=Msa0055440-mRNA-1:exon:3948;Parent=Msa0055440-mRNA-1
chr1_2 exon 10416459 10416592 10416459 ID=Msa0055440-mRNA-1:exon:3949;Parent=Msa0055440-mRNA-1
chr1_2 exon 10416732 10416959 10416732 ID=Msa0055440-mRNA-1:exon:3950;Parent=Msa0055440-mRNA-1
chr1_2 exon 10417062 10417233 10417062 ID=Msa0055440-mRNA-1:exon:3951;Parent=Msa0055440-mRNA-1
chr1_2 exon 10417704 10417958 10417704 ID=Msa0055440-mRNA-1:exon:3952;Parent=Msa0055440-mRNA-1
chr1_2 exon 10418083 10418631 10418083 ID=Msa0055440-mRNA-1:exon:3953;Parent=Msa0055440-mRNA-1
chr1_2 five_prime_UTR 10410340 10410398 10410340 ID=Msa0055440-mRNA-1:five_prime_utr;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10410399 10410685 10410399 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10410921 10411041 10410921 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10411131 10411219 10411131 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10411323 10411407 10411323 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10411912 10412071 10411912 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10412162 10412238 10412162 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10412616 10412669 10412616 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10412751 10412841 10412751 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10412940 10413241 10412940 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10413338 10413619 10413338 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10413799 10414115 10413799 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10414203 10414363 10414203 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10414535 10414638 10414535 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10414754 10414910 10414754 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10415006 10415107 10415006 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10415204 10415331 10415204 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10415433 10415765 10415433 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10415915 10416205 10415915 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10416288 10416371 10416288 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10416459 10416592 10416459 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10416732 10416959 10416732 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10417062 10417233 10417062 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10417704 10417958 10417704 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 CDS 10418083 10418340 10418083 ID=Msa0055440-mRNA-1:cds;Parent=Msa0055440-mRNA-1
chr1_2 three_prime_UTR 10418341 10418631 10418341 ID=Msa0055440-mRNA-1:three_prime_utr;Parent=Msa0055440-mRNA-1
Gene Sequence

>Msa0055440

ATGGAGAGGAGTGACACTAAAACATGGAAGAACCATTGCATGGATGTTTTCTCAAAATCTGAACGTGAAGATGATGAGGAAGCTCTAAAGTGTGTTGCAATAAAGAGAATTCTTACAAGTAAATGCTTTAAGAAAAATGTAGAGAGCAAAGGAGAAGAAAAAGGAAAAGATGTTGAAACAATTCAACTTAAATTGGTAGAGAAAAGAGCATTGTTAGAAAGACTTGTGAAGATTGCTGAAGAAGATAATGAAAAGTTCTTGTTGAAACTCAAGGAAAGAATGGACAGAGTTGGACTTGAACTTCCAACAATTGAAGTTAGATTTGAGGATATAAATGTGGAAGCACAAGTTTATGTTGGAAGGAGAGCATTGCCTACATTATTTAACTTCTTTGTGAATGTGATAGAGAGGTGTTTAAATAATCTTCAAATAATTCCAAGTCCAAAGAAACAGTTACATATACTTCAGAATGTTAGTGGAATCATAAAGCCTAGAAGGATGACATTGCTTTTAGGGCCACCTGGTTCTGGAAAGACCACTTTATTGTTGGCATTGGCTGGGAGACTTGGCAAAGATTTGAAGCAATCTGGAAGAGTAACATACAATGGGAAAGGACTAGAAGAGTTTGTTCCACAAAGAACATCAGCTTATGTAAGTCAACATGATAATCACATTGGAGAAATGACTGTGAGAGAGACACTAGCTTTCTCAGCAAGATGTCAAGGGGTTGGACAAAATTACGAAATGTTGACTGAACTGCTGAGAAAAGAGAAGGAATCAAAGATTGAACCAGATCCTGATATTAATGCCTATATGAAGGAAGCAGCAATAGAAGGCCATCAGAACAGTGTGGTCATTGACTACATTCTTAAGATTTTGGGGCTTGATGTTTGTGCTGACACAATGGTAGGAGACCAAATGATAAGAGGTATCTCAGGTGGCGAGAAAAAGCGACTCACTACAGGTGAGATGCTGGTTGGACCTATAAAGGTGTTGTTCATGGATGAGATATCAAATGGTTTGGACAGTTCAACAACTTTTCAGATAATCAACTCAATCAAGCAATCTATTCATATTCTAAATGAAACTGCACTTGTTTCTCTTCTACAACCAGCACCAGAAACTTATGAACTATTTGATGATATACTACTTCTCACTGATGGACAAATTGTGTATCAAGGACCAAAAGAAAATGTACTTGAGTTTTTTGAATCGACCGGTTTCAAGTGTCCAGAAAGAAAAGGCGTTGCTGATTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAATATTGGGCTCGTGAAGATGAACCTTATAACTTTGTCACTGTCAAGGATTTTTCTCGAGCCTTCGAATTATTTCATGTAGGCAAACAACTTGGAGAAGAGCTGGCCGATCCATTTGACAAGTCTAAATTTCATTCAAATGTCTTGATTACAAAGAAATATGGTATTAACAAGAAGGAGCTGCTAAGGGCTTGTGCTAGCAGAGAGTTATTGCTTATGAAGAGAAATTCTTTTGTCTACATATTCAAAGCCACACAACTTACTTATTTAGCTACCTTGACGACGACATTATTTCTACGAACCAAGATGTATCATTCTACCATTGAGGATGCACAAACATACATGGGAGCACTATTTTTCACAGTCACAGTAGCAATGTTCAATGGAATATCAGAGCTAAATATGACTATCATGAAACTTCCTATCTTTTACAAGCAAAGAGATCTTCTTTTCTATCCTTCATGGGCTTATTCTCTTCCACCATGGATCCTCAAAATACCAATAACTATCATTGAAGTTGCCATTTGGGAATGCATCTCTTACTACGCCATTGGCTTTGATCCAAATATTGGAAGGTTTTTTAAACAGTCGTTGGTAGTCCTATGCATTAATCAGATGGCGTCTGCGTTATTTCGGTTTATGGCAGCATTAGGAAGGGATATTGTAGTGGCAAACACATTTGGAACATTTTCACTACTTGCTGTTACTGTTTTGGGAGGATTTGTTATTTCAAGAGAGGATGTGCATAAATGGTTTCTTTGGGGTTATTGGTCGTCGCCATTGATGTATGGACAAAATGCTATAGCTGTGAATGAATTTCTTGGACATGGTTGGAGAAAGGTTGTCCCTAGTTCCAATGAAACATTGGGAGTATCGATACTGAAATCTCGCGGATTTTTCCCTCAAGCTTATTGGTATTGGATTGGAATTGGAGCTTTGATTGGTTATGTTTTTCTATTTAATTTTCTCTTCGCGTTGGCTTTGCACTTTCTCAGTCCATTCAGAAAAGATCAAGCAGGCTTATCCCAAGAGAAATTGCAAGAGAGAAATGCTTCAACAGATGAAAAGTTTATTCAATCGCAACAAGAGAACTCTTCTACTACAAATACGGACGAAGCAGTTAGCGAAAACAAAGCTAGCAGTAGTGGAAGAAAAGGCATGGTTCTTCCTTTTCAACCTCTATCCCTAACTTTTGATGATATCAGATATTCTGTTGACATGCCACAGGGAATGAAAAACCAAGGAGTTTCCGAGGAACGTCTCGAACTTTTGAAGGGTGTTAGTGGTGCTTTTAGACCTGGAGTACTAACAGCTTTGATGGGTGTAAGTGGTGCTGGAAAGACTACTTTAATGGATGTTTTAGCTGGAAGAAAAACTAGTGGATATATTGAAGGAAACATTACAGTATCCGGCTATCCAAAGAATCAAAAATCATTCGCTCGCATATCGGGATATTGTGAACAATTCGATATTCACTCACCCAATGTTACGGTCTACGAATCTTTGCTATATTCTGCATGGCTTCGTTTATCGCCTGAAGTTGATCATGCAACTAGAAAGATGTTTATTGAGGAAGTTATGGAGCTTGTAGAGCTTAACTCATTAAGAGAAGCACTTGTTGGATTGCCAGGCGAAAATGGACTTTCAACCGAACAACGCAAGAGACTTACAATTGCAGTTGAACTTGTAGCGAATCCATCGATAATATTCATGGATGAACCAACCTCTGGACTTGATGCTAGAGCAGCTGCAATTGTAATGCGAACAGTAAGGAACACTGTGGACACAGGACGTACCGTGGTGTGCACAATCCATCAGCCGAGTATTGACATATTTGATTCCTTTGATGAGCTGCTTCTTCTGAAATTGGGAGGTGAGCAGATATATGCTGGTCCAATAGGCAACCACTGTTCCGATCTGATTCAGTACTTCGAGGCTATTCAAGGAGTTCCTAAGATCAAAGATGGGTATAATCCTGCAACATGGATGTTGGAAATTACAACAGCCGGAAAAGAGGCAAATCTTAAGGTCAATTTCACTGATGTGTACAAAAACTCTGAACTACATCGGAGAAATAAACAATTGATCCAAGAGCTTAGTGTTCCTTCTCAAAGTTCAAAAGATCTATACTTTGATGCTCAATATTCACAGACATTTGTAGCACAATGCATAGCTTGTTTATGGAAACAACATTTATCATATTGGAGGAATACATCATATACAGCTGTTAGACTCCTATTTACTATAATGACCGGTATATTGTTTGGCCTGATATTTTGGGGCGTTGGCGCGAAAAGTAAAAAGGAGCAAGATTTATTCAATGCAATGGGGTCAATGTATGCTGCTGTTACCTTCATAGGGGTTGTAAATGGTGCCTCGGTACAACCAATAGTAGCAATTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCAGGAATGTATTCAGCTATGCCATATGCTCTTGCACAGGTTATCATAGAACTTCCCCACATCTTGGTTCAAGCTGTTGTATATGGGATCATAGTATATGCCATGATGGGATTTGAGTGGACAGCATCAAAAGTTTTGTGGAATCTCTTCTTCACTTATTTTAGTTTCTTATACTATACATACTATGGTATGATGACAATGGCCATAACTCCAAATCCACATGTTGCTGGCATATTATCCACCTCATTCTATGCAATATGGTGCCTTTTCTCAGGCTTCATTATTCCCTTATCTAGAATACCAATATGGTGGAAATGGTACTATTGGATTTGTCCTGTTGCATGGACCTTGAATGGATTGGTGACTTCCCAATATGGACACAACATGAACACACTTGACAATGGTCAAAGGGTTGAAGAATTTGTTAGGAATTACTTTGGTTTTGAACATGACTTCCTAGGAGTGGTTGCAATTGTTGTGGCTAGTTTATCAGTGTTCTTTGCACTTATCTTCACCTTTGGTATCAAAGCATTCAACTTCCAAAAAAGATGA
Protein sequence

>Msa0055440

MERSDTKTWKNHCMDVFSKSEREDDEEALKCVAIKRILTSKCFKKNVESKGEEKGKDVETIQLKLVEKRALLERLVKIAEEDNEKFLLKLKERMDRVGLELPTIEVRFEDINVEAQVYVGRRALPTLFNFFVNVIERCLNNLQIIPSPKKQLHILQNVSGIIKPRRMTLLLGPPGSGKTTLLLALAGRLGKDLKQSGRVTYNGKGLEEFVPQRTSAYVSQHDNHIGEMTVRETLAFSARCQGVGQNYEMLTELLRKEKESKIEPDPDINAYMKEAAIEGHQNSVVIDYILKILGLDVCADTMVGDQMIRGISGGEKKRLTTGEMLVGPIKVLFMDEISNGLDSSTTFQIINSIKQSIHILNETALVSLLQPAPETYELFDDILLLTDGQIVYQGPKENVLEFFESTGFKCPERKGVADFLQEVTSRKDQWQYWAREDEPYNFVTVKDFSRAFELFHVGKQLGEELADPFDKSKFHSNVLITKKYGINKKELLRACASRELLLMKRNSFVYIFKATQLTYLATLTTTLFLRTKMYHSTIEDAQTYMGALFFTVTVAMFNGISELNMTIMKLPIFYKQRDLLFYPSWAYSLPPWILKIPITIIEVAIWECISYYAIGFDPNIGRFFKQSLVVLCINQMASALFRFMAALGRDIVVANTFGTFSLLAVTVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHGWRKVVPSSNETLGVSILKSRGFFPQAYWYWIGIGALIGYVFLFNFLFALALHFLSPFRKDQAGLSQEKLQERNASTDEKFIQSQQENSSTTNTDEAVSENKASSSGRKGMVLPFQPLSLTFDDIRYSVDMPQGMKNQGVSEERLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYIEGNITVSGYPKNQKSFARISGYCEQFDIHSPNVTVYESLLYSAWLRLSPEVDHATRKMFIEEVMELVELNSLREALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDSFDELLLLKLGGEQIYAGPIGNHCSDLIQYFEAIQGVPKIKDGYNPATWMLEITTAGKEANLKVNFTDVYKNSELHRRNKQLIQELSVPSQSSKDLYFDAQYSQTFVAQCIACLWKQHLSYWRNTSYTAVRLLFTIMTGILFGLIFWGVGAKSKKEQDLFNAMGSMYAAVTFIGVVNGASVQPIVAIERTVFYRERAAGMYSAMPYALAQVIIELPHILVQAVVYGIIVYAMMGFEWTASKVLWNLFFTYFSFLYYTYYGMMTMAITPNPHVAGILSTSFYAIWCLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVTSQYGHNMNTLDNGQRVEEFVRNYFGFEHDFLGVVAIVVASLSVFFALIFTFGIKAFNFQKR*