AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0012070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012070 MtrunA17_Chr1g0161111 92.204 372 29 0 1 372 60 431 0.0 682
Msa0012070 MtrunA17_Chr1g0161081 95.455 352 16 0 21 372 21 372 0.0 668
Msa0012070 MtrunA17_Chr1g0161041 85.753 372 46 1 1 372 31 395 0.0 632
Msa0012070 MtrunA17_Chr7g0266651 50.992 353 166 4 21 368 8 358 9.16e-129 374
Msa0012070 MtrunA17_Chr6g0472861 46.774 372 183 6 14 372 5 374 2.47e-113 335
Msa0012070 MtrunA17_Chr7g0225881 45.706 361 189 2 17 370 8 368 3.01e-112 332
Msa0012070 MtrunA17_Chr1g0184241 43.662 355 190 5 21 371 18 366 2.83e-105 314
Msa0012070 MtrunA17_Chr2g0311831 43.099 355 195 4 22 371 18 370 9.21e-103 308
Msa0012070 MtrunA17_Chr1g0187821 45.028 362 191 4 17 371 9 369 1.48e-101 305
Msa0012070 MtrunA17_Chr2g0311701 41.287 373 209 3 6 369 2 373 3.99e-101 304
Msa0012070 MtrunA17_Chr2g0311761 42.697 356 196 5 22 371 18 371 1.92e-100 302
Msa0012070 MtrunA17_Chr8g0336851 39.779 362 206 5 17 371 7 363 5.42e-100 300
Msa0012070 MtrunA17_Chr8g0336761 42.286 350 191 4 28 371 19 363 2.40e-99 299
Msa0012070 MtrunA17_Chr1g0187831 44.142 367 192 7 17 372 10 374 6.38e-99 298
Msa0012070 MtrunA17_Chr8g0348081 41.429 350 194 4 28 371 19 363 5.57e-98 295
Msa0012070 MtrunA17_Chr1g0187811 43.089 369 195 6 17 371 125 492 7.02e-98 299
Msa0012070 MtrunA17_Chr8g0354261 40.720 361 200 5 21 371 17 373 8.43e-98 295
Msa0012070 MtrunA17_Chr8g0336631 41.595 351 193 5 28 371 19 364 1.76e-97 294
Msa0012070 MtrunA17_Chr8g0336751 41.573 356 201 4 21 371 43 396 6.00e-97 294
Msa0012070 MtrunA17_Chr8g0336781 41.026 351 195 5 28 371 54 399 9.26e-97 293
Msa0012070 MtrunA17_Chr8g0354241 39.612 361 204 5 21 371 17 373 1.65e-95 290
Msa0012070 MtrunA17_Chr7g0235951 41.643 353 195 4 21 365 17 366 3.49e-95 288
Msa0012070 MtrunA17_Chr2g0311861 42.254 355 178 5 22 371 14 346 5.92e-95 287
Msa0012070 MtrunA17_Chr2g0311681 40.110 364 208 3 15 369 5 367 5.62e-94 285
Msa0012070 MtrunA17_Chr8g0336861 40.057 352 198 6 28 371 19 365 5.71e-94 285
Msa0012070 MtrunA17_Chr2g0311711 40.896 357 204 3 17 367 11 366 1.25e-93 284
Msa0012070 MtrunA17_Chr2g0311921 39.326 356 208 5 22 371 4 357 3.56e-93 283
Msa0012070 MtrunA17_Chr4g0055591 41.691 343 193 4 27 365 15 354 5.21e-92 280
Msa0012070 MtrunA17_Chr2g0311691 39.835 364 209 3 15 369 5 367 1.67e-91 279
Msa0012070 MtrunA17_Chr1g0167951 42.297 357 192 6 22 371 5 354 3.98e-91 277
Msa0012070 MtrunA17_Chr1g0167911 41.595 351 192 6 22 365 5 349 1.72e-90 276
Msa0012070 MtrunA17_Chr4g0066121 40.922 347 192 6 14 352 4 345 2.39e-90 276
Msa0012070 MtrunA17_Chr1g0167961 41.714 350 194 6 22 365 20 365 3.61e-90 275
Msa0012070 MtrunA17_Chr7g0247991 43.895 344 182 5 21 356 17 357 4.87e-90 275
Msa0012070 MtrunA17_Chr2g0311741 40.308 325 190 2 48 369 2 325 2.03e-89 272
Msa0012070 MtrunA17_Chr8g0364471 38.095 357 206 5 17 363 13 364 3.53e-89 273
Msa0012070 MtrunA17_Chr7g0236011 41.061 358 198 6 17 365 13 366 5.75e-87 267
Msa0012070 MtrunA17_Chr1g0161101 87.349 166 12 1 168 333 346 502 5.40e-86 269
Msa0012070 MtrunA17_Chr1g0161101 65.060 166 21 3 1 166 82 210 3.31e-54 186
Msa0012070 MtrunA17_Chr8g0335411 40.793 353 198 5 21 365 17 366 2.10e-84 261
Msa0012070 MtrunA17_Chr4g0066991 38.719 359 189 7 21 371 17 352 4.78e-77 241
Msa0012070 MtrunA17_Chr1g0167931 38.109 349 169 6 22 365 5 311 3.58e-76 238
Msa0012070 MtrunA17_Chr7g0235981 37.535 357 184 7 21 371 3 326 2.06e-74 234
Msa0012070 MtrunA17_Chr4g0011311 39.416 274 161 2 21 291 17 288 1.09e-69 221
Msa0012070 MtrunA17_Chr3g0128001 36.095 338 204 7 40 371 5 336 1.82e-63 206
Msa0012070 MtrunA17_Chr8g0362741 38.745 271 152 4 21 291 17 273 5.49e-61 197
Msa0012070 MtrunA17_Chr2g0311631 34.006 347 213 7 35 371 20 360 3.38e-60 198
Msa0012070 MtrunA17_Chr7g0242551 36.607 336 193 9 37 357 15 345 5.35e-60 197
Msa0012070 MtrunA17_Chr8g0345831 33.234 334 214 6 43 371 13 342 1.06e-59 196
Msa0012070 MtrunA17_Chr3g0113641 35.588 340 204 8 24 352 2 337 3.37e-59 195
Msa0012070 MtrunA17_Chr3g0093741 35.260 346 207 10 35 371 16 353 1.31e-58 194
Msa0012070 MtrunA17_Chr4g0006371 35.882 340 191 8 37 352 14 350 4.93e-58 192
Msa0012070 MtrunA17_Chr3g0093751 34.971 346 208 10 35 371 16 353 9.34e-58 191
Msa0012070 MtrunA17_Chr3g0093761 34.971 346 207 11 35 371 16 352 1.48e-56 188
Msa0012070 MtrunA17_Chr5g0421101 32.267 344 217 7 36 371 12 347 5.57e-56 187
Msa0012070 MtrunA17_Chr5g0437181 35.799 338 198 9 28 352 5 336 1.43e-55 186
Msa0012070 MtrunA17_Chr1g0184121 35.061 328 198 7 43 362 9 329 4.50e-55 184
Msa0012070 MtrunA17_Chr5g0423191 33.133 332 206 7 48 371 24 347 1.19e-54 183
Msa0012070 MtrunA17_Chr1g0184111 34.451 328 200 7 43 362 9 329 1.38e-54 183
Msa0012070 MtrunA17_Chr5g0423251 33.133 332 206 7 48 371 24 347 4.88e-54 182
Msa0012070 MtrunA17_Chr5g0421041 32.277 347 211 8 36 371 12 345 5.38e-54 181
Msa0012070 MtrunA17_Chr5g0420901 31.195 343 220 8 37 371 12 346 4.66e-53 179
Msa0012070 MtrunA17_Chr1g0179801 33.721 344 213 8 36 366 26 367 8.96e-53 179
Msa0012070 MtrunA17_Chr7g0220001 36.949 295 170 8 73 359 41 327 2.30e-52 177
Msa0012070 MtrunA17_Chr7g0265351 35.161 310 186 7 69 371 35 336 2.56e-52 177
Msa0012070 MtrunA17_Chr6g0455481 34.472 322 192 10 47 359 18 329 3.82e-52 176
Msa0012070 MtrunA17_Chr5g0423221 31.085 341 214 9 36 365 36 366 6.61e-52 177
Msa0012070 MtrunA17_Chr7g0220011 34.969 326 198 9 47 366 15 332 7.11e-52 176
Msa0012070 MtrunA17_Chr5g0421011 32.558 344 216 9 36 371 12 347 7.18e-52 176
Msa0012070 MtrunA17_Chr5g0420941 31.412 347 216 9 36 371 10 345 9.13e-52 176
Msa0012070 MtrunA17_Chr8g0375571 31.805 349 210 10 36 368 10 346 9.14e-52 176
Msa0012070 MtrunA17_Chr5g0423201 31.412 347 217 9 36 371 12 348 3.47e-51 174
Msa0012070 MtrunA17_Chr5g0412651 36.120 299 177 7 73 360 38 333 5.03e-51 174
Msa0012070 MtrunA17_Chr1g0184161 32.622 328 205 8 43 362 10 329 5.66e-51 173
Msa0012070 MtrunA17_Chr8g0336831 37.555 229 134 3 28 251 19 243 7.69e-51 170
Msa0012070 MtrunA17_Chr8g0365241 31.045 335 220 7 36 364 22 351 1.08e-50 173
Msa0012070 MtrunA17_Chr5g0421091 29.942 344 224 8 37 371 11 346 2.04e-50 172
Msa0012070 MtrunA17_Chr5g0420981 31.014 345 222 8 36 371 17 354 2.21e-50 172
Msa0012070 MtrunA17_Chr5g0423211 30.857 350 216 9 36 371 12 349 6.45e-50 171
Msa0012070 MtrunA17_Chr1g0184151 32.132 333 215 9 43 369 10 337 1.17e-49 170
Msa0012070 MtrunA17_Chr8g0375671 33.333 312 190 8 72 371 51 356 3.40e-49 169
Msa0012070 MtrunA17_Chr8g0371931 32.523 329 201 10 46 362 14 333 3.70e-49 169
Msa0012070 MtrunA17_Chr1g0184101 33.735 332 205 8 43 366 9 333 3.86e-49 169
Msa0012070 MtrunA17_Chr3g0109041 31.871 342 212 9 37 364 10 344 5.29e-49 169
Msa0012070 MtrunA17_Chr5g0420951 31.014 345 228 7 33 371 14 354 1.58e-48 167
Msa0012070 MtrunA17_Chr2g0314381 29.118 340 223 9 42 371 48 379 7.98e-48 166
Msa0012070 MtrunA17_Chr2g0314391 30.058 346 224 9 36 371 35 372 1.23e-47 166
Msa0012070 MtrunA17_Chr8g0371921 32.628 331 198 10 46 362 14 333 2.96e-47 164
Msa0012070 MtrunA17_Chr8g0336801 46.154 156 81 2 218 371 1 155 3.80e-47 157
Msa0012070 MtrunA17_Chr3g0126741 33.333 339 200 12 35 356 21 350 1.22e-46 162
Msa0012070 MtrunA17_Chr7g0239111 29.882 338 228 8 36 368 19 352 5.70e-46 161
Msa0012070 MtrunA17_Chr4g0045441 32.317 328 186 8 73 369 26 348 6.30e-46 160
Msa0012070 MtrunA17_Chr4g0045451 31.269 323 191 7 73 369 26 343 1.18e-45 160
Msa0012070 MtrunA17_Chr5g0412681 34.130 293 177 7 73 357 33 317 1.84e-45 159
Msa0012070 MtrunA17_Chr7g0250511 30.120 332 220 8 29 353 6 332 1.88e-45 159
Msa0012070 MtrunA17_Chr7g0265221 30.226 354 216 9 32 360 21 368 2.34e-45 160
Msa0012070 MtrunA17_Chr5g0412671 34.915 295 180 6 73 357 38 330 3.28e-45 158
Msa0012070 MtrunA17_Chr7g0239101 30.820 305 197 6 72 368 54 352 1.15e-44 157
Msa0012070 MtrunA17_Chr1g0162351 32.479 351 196 12 52 369 51 393 1.23e-44 158
Msa0012070 MtrunA17_Chr5g0398291 31.085 341 216 8 37 360 8 346 1.49e-44 157
Msa0012070 MtrunA17_Chr8g0375601 29.714 350 222 10 37 371 11 351 1.82e-44 157
Msa0012070 MtrunA17_Chr5g0405411 31.046 306 196 8 61 355 25 326 2.39e-44 156
Msa0012070 MtrunA17_Chr7g0239821 29.179 329 218 9 48 368 40 361 1.24e-43 155
Msa0012070 MtrunA17_Chr1g0162361 33.908 348 193 12 48 369 4 340 1.64e-43 154
Msa0012070 MtrunA17_Chr8g0375701 30.659 349 226 9 27 365 6 348 2.24e-43 154
Msa0012070 MtrunA17_Chr3g0102041 30.699 329 206 8 52 362 9 333 2.73e-43 154
Msa0012070 MtrunA17_Chr8g0336871 43.103 174 90 3 194 365 1 167 4.05e-43 147
Msa0012070 MtrunA17_Chr5g0426891 30.347 346 224 10 36 371 3 341 1.81e-42 151
Msa0012070 MtrunA17_Chr1g0162321 31.909 351 198 12 52 369 51 393 1.82e-42 152
Msa0012070 MtrunA17_Chr4g0045471 30.286 350 199 11 52 369 8 344 2.68e-42 151
Msa0012070 MtrunA17_Chr2g0314401 28.902 346 228 8 36 371 16 353 3.39e-42 150
Msa0012070 MtrunA17_Chr4g0045411 32.759 348 196 11 50 369 10 347 1.01e-41 149
Msa0012070 MtrunA17_Chr7g0239121 27.928 333 224 8 48 371 27 352 3.68e-41 148
Msa0012070 MtrunA17_Chr4g0045431 32.899 307 175 8 73 353 26 327 3.88e-41 148
Msa0012070 MtrunA17_Chr2g0296371 28.783 337 218 8 46 369 26 353 7.67e-40 144
Msa0012070 MtrunA17_Chr6g0474391 29.674 337 204 9 47 361 42 367 1.45e-39 144
Msa0012070 MtrunA17_Chr1g0191201 32.099 324 195 10 46 353 31 345 4.63e-39 143
Msa0012070 MtrunA17_Chr1g0162191 30.844 308 195 9 69 365 43 343 6.11e-39 142
Msa0012070 MtrunA17_Chr8g0375681 32.234 273 177 5 104 371 15 284 6.74e-39 140
Msa0012070 MtrunA17_Chr2g0289341 30.612 294 184 8 74 357 5 288 7.62e-39 140
Msa0012070 MtrunA17_Chr8g0370711 32.759 290 185 7 62 345 44 329 8.17e-39 142
Msa0012070 MtrunA17_Chr5g0420721 32.941 255 153 8 127 371 3 249 2.94e-38 137
Msa0012070 MtrunA17_Chr2g0332191 30.844 308 192 8 73 367 52 351 6.05e-38 140
Msa0012070 MtrunA17_Chr5g0439011 30.976 297 181 10 73 356 5 290 6.20e-38 138
Msa0012070 MtrunA17_Chr1g0204181 30.060 336 202 11 48 361 38 362 6.94e-38 140
Msa0012070 MtrunA17_Chr2g0319491 30.247 324 206 6 45 363 8 316 9.13e-38 138
Msa0012070 MtrunA17_Chr3g0121141 31.164 292 183 10 73 356 4 285 1.18e-37 137
Msa0012070 MtrunA17_Chr8g0351101 29.396 381 225 12 13 371 6 364 2.11e-37 138
Msa0012070 MtrunA17_Chr3g0145171 31.673 281 181 7 73 345 52 329 4.01e-36 134
Msa0012070 MtrunA17_Chr3g0130391 31.897 348 200 13 47 371 44 377 7.76e-36 134
Msa0012070 MtrunA17_Chr4g0045461 31.494 308 179 6 73 354 26 327 1.28e-35 133
Msa0012070 MtrunA17_Chr7g0239071 28.723 282 187 6 92 365 19 294 2.05e-35 131
Msa0012070 MtrunA17_Chr5g0424201 30.745 322 195 9 47 353 19 327 3.61e-35 131
Msa0012070 MtrunA17_Chr8g0370721 29.245 318 209 9 62 371 44 353 3.78e-34 129
Msa0012070 MtrunA17_Chr3g0114861 31.722 331 210 9 37 359 6 328 3.79e-34 129
Msa0012070 MtrunA17_Chr3g0125201 29.904 311 178 12 73 361 3 295 4.17e-34 128
Msa0012070 MtrunA17_Chr4g0050031 28.902 346 230 12 35 368 21 362 6.22e-34 129
Msa0012070 MtrunA17_Chr3g0145181 29.431 299 194 9 59 345 36 329 1.21e-33 128
Msa0012070 MtrunA17_Chr7g0239091 27.333 300 204 6 72 368 159 447 1.87e-33 129
Msa0012070 MtrunA17_Chr8g0336791 36.313 179 105 3 28 201 19 193 1.88e-33 123
Msa0012070 MtrunA17_Chr5g0424211 30.592 304 197 7 47 341 17 315 2.10e-33 127
Msa0012070 MtrunA17_Chr3g0125421 30.612 343 204 11 48 369 16 345 2.16e-33 127
Msa0012070 MtrunA17_Chr4g0064781 31.802 283 176 8 73 346 50 324 2.92e-33 127
Msa0012070 MtrunA17_Chr7g0232161 30.142 282 172 6 36 303 24 294 7.27e-33 125
Msa0012070 MtrunA17_Chr8g0364161 37.805 164 97 3 21 181 17 178 1.10e-32 120
Msa0012070 MtrunA17_Chr3g0092531 31.544 298 176 10 70 352 3 287 1.14e-32 124
Msa0012070 MtrunA17_Chr3g0126761 39.153 189 109 5 181 366 42 227 1.91e-32 121
Msa0012070 MtrunA17_Chr3g0145201 28.920 287 192 7 69 345 680 964 4.15e-31 125
Msa0012070 MtrunA17_Chr5g0420881 36.806 144 88 3 229 371 2 143 4.99e-31 115
Msa0012070 MtrunA17_Chr3g0087031 25.914 301 203 10 73 362 60 351 1.56e-30 119
Msa0012070 MtrunA17_Chr1g0168001 37.278 169 98 4 22 183 5 172 2.70e-30 114
Msa0012070 MtrunA17_Chr8g0364171 46.364 110 59 0 182 291 17 126 3.19e-30 113
Msa0012070 MtrunA17_Chr4g0037611 36.957 184 104 4 193 372 1 176 8.17e-30 113
Msa0012070 MtrunA17_Chr7g0235991 38.462 143 85 1 73 212 21 163 2.94e-29 112
Msa0012070 MtrunA17_Chr4g0068891 28.387 310 201 9 73 371 20 319 7.40e-29 114
Msa0012070 MtrunA17_Chr2g0285931 27.463 335 199 11 55 369 20 330 1.58e-28 113
Msa0012070 MtrunA17_Chr5g0394071 38.323 167 95 2 186 352 5 163 1.93e-28 109
Msa0012070 MtrunA17_Chr8g0384461 26.023 342 223 8 32 353 6 337 2.92e-28 113
Msa0012070 MtrunA17_Chr8g0384481 27.604 384 236 13 6 369 4 365 4.15e-28 113
Msa0012070 MtrunA17_Chr1g0167921 44.828 116 64 0 186 301 52 167 4.61e-28 108
Msa0012070 MtrunA17_Chr7g0233661 46.721 122 57 2 231 352 24 137 1.24e-27 106
Msa0012070 MtrunA17_Chr8g0358941 28.391 317 200 10 72 371 26 332 5.06e-27 109
Msa0012070 MtrunA17_Chr6g0488511 30.797 276 166 11 73 335 3 266 2.63e-26 107
Msa0012070 MtrunA17_Chr2g0314371 25.402 311 191 9 42 320 23 324 5.50e-26 106
Msa0012070 MtrunA17_Chr2g0313111 29.393 313 191 14 73 371 28 324 1.83e-25 105
Msa0012070 MtrunA17_Chr6g0486831 27.607 326 204 8 57 357 7 325 7.96e-25 103
Msa0012070 MtrunA17_Chr4g0052251 29.538 325 188 11 63 369 29 330 8.36e-25 103
Msa0012070 MtrunA17_Chr1g0194321 26.168 321 203 9 73 369 20 330 8.91e-25 103
Msa0012070 MtrunA17_Chr4g0075471 39.535 129 73 4 231 356 32 158 5.77e-24 97.1
Msa0012070 MtrunA17_Chr8g0389941 28.440 327 187 14 69 362 30 342 8.79e-24 100
Msa0012070 MtrunA17_Chr3g0105281 26.299 308 187 10 55 352 24 301 9.98e-24 100
Msa0012070 MtrunA17_Chr1g0148771 29.572 257 165 10 73 322 63 310 2.84e-23 99.4
Msa0012070 MtrunA17_Chr4g0055871 27.612 268 166 10 75 322 6 265 4.28e-23 98.2
Msa0012070 MtrunA17_Chr2g0311751 35.659 129 80 1 58 183 12 140 1.52e-22 93.2
Msa0012070 MtrunA17_Chr3g0114871 29.804 255 165 7 46 291 16 265 6.55e-22 94.4
Msa0012070 MtrunA17_Chr3g0092581 35.802 162 95 6 195 352 3 159 7.45e-22 92.0
Msa0012070 MtrunA17_Chr8g0348951 27.181 298 189 11 74 353 6 293 2.62e-21 93.2
Msa0012070 MtrunA17_Chr4g0055911 26.394 269 172 9 73 322 9 270 3.53e-21 93.2
Msa0012070 MtrunA17_Chr1g0170631 29.381 194 131 5 181 371 1 191 7.27e-21 89.4
Msa0012070 MtrunA17_Chr7g0247741 28.315 279 171 8 69 331 7 272 1.48e-20 91.3
Msa0012070 MtrunA17_Chr1g0158011 27.132 258 177 6 112 365 4 254 1.19e-19 87.4
Msa0012070 MtrunA17_Chr4g0064771 32.584 178 111 5 171 346 19 189 4.21e-18 82.0
Msa0012070 MtrunA17_Chr5g0407731 26.502 283 195 9 73 352 33 305 4.86e-18 84.3
Msa0012070 MtrunA17_Chr1g0158021 28.444 225 143 8 69 283 45 261 5.81e-18 82.8
Msa0012070 MtrunA17_Chr2g0311611 50.000 70 28 1 229 291 2 71 6.74e-18 77.4
Msa0012070 MtrunA17_Chr5g0407781 27.974 311 184 15 73 366 5 292 1.25e-17 82.4
Msa0012070 MtrunA17_Chr2g0293931 28.426 197 129 6 186 372 10 204 9.55e-17 78.2
Msa0012070 MtrunA17_Chr8g0336841 44.578 83 43 2 291 371 9 90 1.63e-16 74.3
Msa0012070 MtrunA17_Chr2g0311641 31.852 135 85 4 35 166 20 150 1.30e-15 73.9
Msa0012070 MtrunA17_Chr4g0004061 23.667 300 218 7 69 360 5 301 3.14e-15 75.9
Msa0012070 MtrunA17_Chr4g0004071 24.585 301 207 10 72 360 8 300 3.20e-15 75.9
Msa0012070 MtrunA17_Chr2g0319521 33.028 109 73 0 183 291 16 124 6.43e-15 71.2
Msa0012070 MtrunA17_Chr8g0375581 41.573 89 45 3 204 288 1 86 9.86e-15 68.9
Msa0012070 MtrunA17_Chr5g0420891 31.884 138 85 4 37 171 12 143 4.40e-14 69.7
Msa0012070 MtrunA17_Chr2g0311621 32.479 117 74 3 18 132 2 115 8.55e-14 67.4
Msa0012070 MtrunA17_Chr4g0053251 37.405 131 71 5 241 369 199 320 2.14e-12 67.4
Msa0012070 MtrunA17_Chr7g0219991 42.045 88 49 2 200 286 265 351 2.15e-12 67.8
Msa0012070 MtrunA17_Chr7g0219991 29.600 125 85 2 47 170 15 137 1.20e-11 65.5
Msa0012070 MtrunA17_Chr3g0138351 22.956 318 222 10 69 369 3 314 5.09e-11 63.2
Msa0012070 MtrunA17_Chr8g0375661 29.412 136 83 4 36 164 17 146 9.65e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012070 AT1G03410.2 45.378 357 184 5 22 369 5 359 8.52e-108 320
Msa0012070 AT1G03410.1 45.378 357 184 5 22 369 42 396 2.04e-107 321
Msa0012070 AT1G06650.2 44.628 363 189 5 19 371 8 368 1.78e-105 315
Msa0012070 AT1G03400.1 45.429 350 184 2 22 369 5 349 4.37e-105 313
Msa0012070 AT2G30840.1 42.577 357 199 2 21 371 5 361 1.07e-104 313
Msa0012070 AT1G06620.1 45.070 355 176 6 22 365 12 358 2.64e-104 312
Msa0012070 AT1G04350.1 42.373 354 201 2 21 371 6 359 6.32e-104 311
Msa0012070 AT5G59530.1 45.304 362 186 7 17 369 4 362 1.66e-103 310
Msa0012070 AT1G06640.1 44.199 362 190 5 14 365 3 362 1.45e-100 302
Msa0012070 AT2G30840.3 42.577 357 193 3 21 371 5 355 3.33e-100 301
Msa0012070 AT2G30830.1 41.573 356 200 3 21 371 5 357 1.22e-99 300
Msa0012070 AT5G59540.1 41.341 358 202 5 15 365 3 359 3.52e-99 299
Msa0012070 AT1G03400.2 42.063 378 184 3 22 369 5 377 8.83e-99 298
Msa0012070 AT3G61400.1 41.370 365 198 6 14 366 5 365 3.27e-97 294
Msa0012070 AT1G06645.1 42.308 364 195 5 18 371 20 378 2.60e-93 284
Msa0012070 AT2G25450.1 40.390 359 201 5 21 371 5 358 3.97e-90 275
Msa0012070 AT1G04380.1 40.549 328 185 4 48 371 23 344 6.30e-90 274
Msa0012070 AT5G43440.1 40.336 357 203 7 23 371 10 364 6.27e-89 272
Msa0012070 AT5G43450.1 40.110 364 206 7 15 370 2 361 1.64e-86 266
Msa0012070 AT1G06620.2 47.080 274 137 3 22 290 12 282 7.84e-85 259
Msa0012070 AT2G30840.2 45.091 275 146 1 21 290 5 279 9.15e-84 257
Msa0012070 AT1G06650.1 45.552 281 143 4 19 291 8 286 3.84e-82 253
Msa0012070 AT1G06640.2 44.746 295 153 4 14 300 3 295 3.85e-81 251
Msa0012070 AT1G06640.3 45.105 286 147 4 14 291 3 286 7.05e-80 246
Msa0012070 AT5G59540.2 40.426 282 163 3 15 291 3 284 8.27e-76 236
Msa0012070 AT3G61400.2 41.667 288 154 5 14 291 5 288 1.51e-74 233
Msa0012070 AT3G13610.1 38.286 350 202 9 27 369 16 358 5.01e-72 229
Msa0012070 AT1G55290.1 38.529 340 199 8 35 369 24 358 8.70e-70 223
Msa0012070 AT5G43450.2 41.219 279 160 3 15 290 2 279 3.81e-68 216
Msa0012070 AT1G04380.2 40.244 246 144 1 48 293 23 265 6.23e-68 215
Msa0012070 AT5G43440.2 40.876 274 155 5 23 290 10 282 9.98e-68 216
Msa0012070 AT3G12900.1 36.932 352 191 12 35 371 20 355 3.76e-62 203
Msa0012070 AT4G10490.1 34.808 339 208 7 41 371 11 344 3.28e-60 198
Msa0012070 AT5G24530.1 35.484 341 204 9 40 370 5 339 1.09e-59 196
Msa0012070 AT2G38240.1 34.743 331 204 7 37 359 12 338 2.05e-58 193
Msa0012070 AT3G11180.2 36.637 333 192 9 37 357 56 381 2.68e-57 192
Msa0012070 AT3G11180.1 36.637 333 192 9 37 357 56 381 2.77e-57 192
Msa0012070 AT4G10500.1 34.954 329 206 7 48 371 20 345 6.15e-57 189
Msa0012070 AT3G55970.1 33.824 340 207 9 28 352 5 341 2.31e-56 188
Msa0012070 AT5G05600.1 34.251 327 200 8 37 352 27 349 4.60e-53 180
Msa0012070 AT2G36690.2 31.845 336 218 6 34 360 18 351 1.01e-52 179
Msa0012070 AT2G36690.1 31.845 336 218 6 34 360 18 351 1.01e-52 179
Msa0012070 AT4G25300.1 30.769 338 216 10 45 371 25 355 1.11e-50 173
Msa0012070 AT1G17010.1 30.205 341 221 8 42 371 23 357 1.47e-50 173
Msa0012070 AT5G12270.1 33.046 348 217 11 27 364 10 351 8.62e-49 169
Msa0012070 AT3G51240.1 33.667 300 186 7 72 362 37 332 5.66e-48 166
Msa0012070 AT1G78550.1 28.446 341 225 9 42 371 23 355 2.17e-47 165
Msa0012070 AT3G19000.1 34.943 352 186 12 52 369 8 350 1.03e-46 163
Msa0012070 AT1G17020.1 30.973 339 215 10 45 371 26 357 2.18e-46 162
Msa0012070 AT3G60290.1 30.678 339 226 7 40 372 19 354 3.38e-45 159
Msa0012070 AT4G25310.1 31.164 292 183 8 89 371 70 352 1.65e-44 157
Msa0012070 AT4G25420.1 29.738 343 216 9 48 372 40 375 9.61e-44 155
Msa0012070 AT4G16330.2 33.333 300 182 7 73 364 67 356 1.61e-42 152
Msa0012070 AT5G08640.2 32.787 305 176 9 71 359 41 332 1.81e-42 151
Msa0012070 AT5G08640.1 32.787 305 176 9 71 359 41 332 1.81e-42 151
Msa0012070 AT4G22880.1 31.977 344 210 10 37 360 7 346 1.17e-41 149
Msa0012070 AT4G22880.2 31.977 344 210 10 37 360 7 346 1.17e-41 149
Msa0012070 AT4G22880.3 31.977 344 210 10 37 360 7 346 1.17e-41 149
Msa0012070 AT1G05010.1 32.601 273 164 8 73 335 4 266 1.42e-41 149
Msa0012070 AT1G78550.2 28.929 280 183 7 101 371 5 277 7.12e-41 145
Msa0012070 AT3G21420.1 32.362 309 195 7 72 369 54 359 1.55e-40 147
Msa0012070 AT3G19010.1 32.267 344 201 11 52 369 8 345 1.76e-40 146
Msa0012070 AT3G19010.4 32.267 344 201 11 52 369 8 345 1.76e-40 146
Msa0012070 AT2G44800.1 26.724 348 248 5 30 372 9 354 1.05e-39 144
Msa0012070 AT3G55970.2 31.541 279 175 7 28 291 5 282 3.45e-39 142
Msa0012070 AT5G07200.1 30.952 336 199 10 40 353 29 353 2.74e-38 141
Msa0012070 AT3G51240.2 35.965 228 137 5 141 362 24 248 5.06e-38 138
Msa0012070 AT5G05600.2 31.955 266 168 6 37 291 27 290 1.90e-37 137
Msa0012070 AT5G20400.1 29.969 327 214 9 48 364 19 340 4.24e-37 137
Msa0012070 AT1G15550.1 31.849 292 178 10 73 353 57 338 1.52e-36 136
Msa0012070 AT4G21200.1 31.488 289 174 10 72 352 41 313 7.44e-36 134
Msa0012070 AT3G19000.2 35.472 265 143 9 52 291 8 269 1.49e-35 131
Msa0012070 AT3G19010.3 31.515 330 192 14 52 369 8 315 1.49e-35 132
Msa0012070 AT5G51810.1 29.338 317 205 6 48 353 42 350 2.68e-35 133
Msa0012070 AT5G07480.1 28.440 327 213 9 48 361 24 342 1.16e-34 131
Msa0012070 AT4G25300.2 36.216 185 114 4 189 371 79 261 1.95e-34 128
Msa0012070 AT5G63590.1 30.065 306 189 8 61 349 2 299 3.23e-34 129
Msa0012070 AT1G62380.1 28.814 295 187 9 72 356 6 287 8.40e-34 128
Msa0012070 AT1G12010.1 29.831 295 184 10 72 356 6 287 1.00e-33 127
Msa0012070 AT1G60980.1 28.035 346 217 10 48 371 36 371 1.11e-33 129
Msa0012070 AT1G80330.1 29.154 319 200 9 67 368 43 352 2.28e-33 127
Msa0012070 AT4G16330.1 34.450 209 127 4 160 364 48 250 2.88e-33 125
Msa0012070 AT5G20550.1 30.547 311 198 11 48 345 19 324 1.26e-32 125
Msa0012070 AT1G78440.1 30.581 327 194 11 64 372 11 322 2.54e-32 124
Msa0012070 AT4G25420.2 29.344 259 164 5 47 291 39 292 3.77e-32 123
Msa0012070 AT1G77330.1 31.104 299 179 12 73 356 3 289 5.48e-32 122
Msa0012070 AT5G63600.1 28.475 295 192 7 69 355 29 312 7.33e-32 122
Msa0012070 AT4G25310.2 27.835 291 166 8 89 371 70 324 2.12e-31 121
Msa0012070 AT5G63600.2 28.378 296 192 8 69 355 29 313 5.96e-31 120
Msa0012070 AT1G50960.1 28.671 286 189 6 72 352 39 314 7.02e-30 117
Msa0012070 AT1G44090.1 29.041 365 231 13 23 369 18 372 1.18e-29 118
Msa0012070 AT2G19590.1 30.986 284 171 11 72 345 10 278 1.02e-28 114
Msa0012070 AT1G49390.1 27.864 323 217 10 37 348 9 326 1.09e-28 114
Msa0012070 AT1G80340.1 26.959 319 212 9 45 353 24 331 2.32e-28 114
Msa0012070 AT1G47990.1 30.556 324 178 13 72 369 14 316 4.98e-28 112
Msa0012070 AT4G21690.1 30.252 357 191 18 20 353 12 333 7.47e-28 112
Msa0012070 AT5G51810.2 28.682 258 167 4 48 294 42 293 1.02e-27 110
Msa0012070 AT5G54000.2 29.682 283 187 7 72 345 45 324 1.12e-27 112
Msa0012070 AT1G30040.1 26.582 316 211 8 71 372 24 332 1.15e-27 111
Msa0012070 AT3G19010.2 32.061 262 153 9 52 292 8 265 6.09e-27 108
Msa0012070 AT2G34555.1 27.564 312 203 9 73 372 27 327 2.48e-25 105
Msa0012070 AT1G02400.1 27.219 338 215 13 53 371 2 327 2.06e-24 102
Msa0012070 AT2G19590.2 31.225 253 150 10 102 345 26 263 1.41e-23 99.8
Msa0012070 AT5G43935.1 27.090 299 184 8 72 361 18 291 1.71e-23 99.4
Msa0012070 AT5G54000.1 28.745 247 167 6 105 345 1 244 5.97e-23 97.4
Msa0012070 AT5G63595.1 27.692 260 158 6 69 322 21 256 6.74e-23 97.4
Msa0012070 AT4G23340.1 27.798 277 168 9 95 353 30 292 1.51e-22 97.4
Msa0012070 AT1G49390.2 27.490 251 171 7 105 348 1 247 1.62e-21 93.2
Msa0012070 AT3G46500.5 27.103 321 201 10 73 372 17 325 1.71e-21 94.4
Msa0012070 AT3G47190.1 25.000 300 183 8 72 352 31 307 1.31e-20 92.0
Msa0012070 AT1G35190.2 28.523 298 183 9 75 359 14 294 2.48e-20 90.9
Msa0012070 AT3G49620.1 28.049 328 181 10 73 356 34 350 4.26e-20 90.9
Msa0012070 AT5G07480.2 31.771 192 121 6 177 361 45 233 6.82e-20 88.2
Msa0012070 AT5G63580.2 29.204 226 149 5 73 291 19 240 7.59e-20 88.2
Msa0012070 AT5G63580.1 30.043 233 149 7 73 298 19 244 8.03e-20 88.2
Msa0012070 AT4G23340.2 37.815 119 71 3 236 353 58 174 6.49e-19 84.7
Msa0012070 AT1G14120.2 28.873 284 175 11 73 345 8 275 1.09e-18 86.3
Msa0012070 AT1G14120.1 28.873 284 175 11 73 345 8 275 1.09e-18 86.3
Msa0012070 AT1G14120.3 28.873 284 175 11 73 345 8 275 1.09e-18 86.3
Msa0012070 AT1G14130.1 28.197 305 193 10 73 366 9 298 1.66e-18 85.5
Msa0012070 AT3G50210.4 29.474 285 167 9 66 319 3 284 2.27e-18 85.5
Msa0012070 AT3G50210.1 29.474 285 167 9 66 319 3 284 2.27e-18 85.5
Msa0012070 AT3G50210.3 29.474 285 167 9 66 319 3 284 2.27e-18 85.5
Msa0012070 AT3G49630.1 28.571 294 166 9 73 332 9 292 2.50e-18 85.5
Msa0012070 AT1G35190.1 27.010 311 194 8 75 359 14 317 3.55e-18 85.1
Msa0012070 AT3G49630.3 29.259 270 158 8 86 332 29 288 4.02e-18 84.7
Msa0012070 AT3G46490.1 26.129 310 200 9 73 358 17 321 1.20e-17 83.6
Msa0012070 AT3G46500.7 27.306 271 168 8 73 322 17 279 3.85e-17 81.6
Msa0012070 AT5G58660.1 25.152 330 183 11 73 366 34 335 4.09e-17 82.0
Msa0012070 AT3G46490.2 25.753 299 189 9 73 345 17 308 1.76e-16 79.7
Msa0012070 AT1G30040.2 25.660 265 162 8 41 291 10 253 1.71e-14 73.2
Msa0012070 AT1G52820.1 25.413 303 202 10 64 357 13 300 4.12e-14 72.8
Msa0012070 AT4G16765.6 32.886 149 89 4 183 322 60 206 9.31e-14 70.9
Msa0012070 AT4G16765.1 32.886 149 89 4 183 322 60 206 9.31e-14 70.9
Msa0012070 AT4G16765.2 32.886 149 89 4 183 322 60 206 9.31e-14 70.9
Msa0012070 AT4G16765.3 31.638 177 109 5 183 350 60 233 9.40e-14 70.5
Msa0012070 AT4G22870.1 35.294 102 64 2 260 360 2 102 8.80e-13 64.7
Msa0012070 AT3G46500.4 31.618 136 82 4 242 372 60 189 2.43e-12 65.5
Msa0012070 AT3G50210.2 44.186 86 45 3 236 319 118 202 5.24e-12 65.9
Msa0012070 AT3G46500.10 31.618 136 82 4 242 372 122 251 7.96e-12 65.1
Msa0012070 AT3G46500.1 31.618 136 82 4 242 372 122 251 7.96e-12 65.1
Msa0012070 AT4G16770.1 29.245 212 125 6 72 265 21 225 9.39e-12 65.1
Msa0012070 AT4G22870.2 30.370 135 79 5 233 360 17 143 9.88e-11 60.1

Find 148 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGTCGATTGTGGGAATTTC+TGG 0.203913 1_1:-18167932 None:intergenic
GAAACAAAATCCGGCGTAAA+AGG 0.209794 1_1:+18167815 Msa0012070:CDS
ATCTATAAAGCAGCGGTTTC+TGG 0.229034 1_1:+18170442 Msa0012070:three_prime_UTR
GAATGTTTGTGTGTGGGGTT+TGG 0.239471 1_1:-18167670 None:intergenic
GGAGCTTTGGTTATCAATAT+TGG 0.241731 1_1:+18169875 Msa0012070:CDS
AATGTTTGTGTGTGGGGTTT+GGG 0.246780 1_1:-18167669 None:intergenic
GAATTGATGCGAAACGTTAT+TGG 0.254822 1_1:+18168055 Msa0012070:CDS
AGCGGCACGGGAATGGTTTA+TGG 0.269928 1_1:-18167960 None:intergenic
ATAACGTTTCGCATCAATTC+CGG 0.288758 1_1:-18168052 None:intergenic
TCTCCCTATTACCCGGGTTT+AGG 0.289476 1_1:-18170276 None:intergenic
CAATATTGGAGATTTATTTC+AGG 0.290679 1_1:+18169889 Msa0012070:CDS
GGATCATATTGGTGGCTTAC+AGG 0.300374 1_1:+18169811 Msa0012070:CDS
GTGAGGTCAGATAGAGTTTC+GGG 0.306381 1_1:-18167887 None:intergenic
ACCAAGCCGTTACACTAATC+TGG 0.327929 1_1:+18170628 Msa0012070:three_prime_UTR
AGATTAGGCTGAGGGCAAAA+TGG 0.338207 1_1:-18169734 None:intergenic
CTCAATTCTCATGCAGATCC+TGG 0.339245 1_1:+18169767 Msa0012070:CDS
CAGCTGGCGTGACACGCTTC+AGG 0.347179 1_1:+18168195 Msa0012070:CDS
TGAAGAAAGGCTCACAGAAT+TGG 0.350493 1_1:+18169673 Msa0012070:CDS
GAGACCCGTGGCTCGTTAGA+AGG 0.359180 1_1:-18170241 None:intergenic
GGAATCTCCTTCTCTTCCGC+TGG 0.367358 1_1:-18169554 None:intergenic
GACATTAATCCAACCATGTT+GGG 0.368631 1_1:-18169840 None:intergenic
ACGGTGGTTGGTGGTGGTGA+AGG 0.371074 1_1:-18167746 None:intergenic
CGGTGGTTGGTGGTGGTGAA+GGG 0.372563 1_1:-18167745 None:intergenic
TATGTATGTATGTATATATT+AGG 0.376436 1_1:+18170524 Msa0012070:three_prime_UTR
GGCATTGACAGTATTGTTGC+AGG 0.379466 1_1:+18169790 Msa0012070:CDS
CAAGCCTCTTGATGGAGCTT+TGG 0.380373 1_1:+18169862 Msa0012070:CDS
ATTAATGTCAAGCCTCTTGA+TGG 0.388054 1_1:+18169854 Msa0012070:CDS
CGTTCCGCTGCAAGTACGTT+TGG 0.389362 1_1:+18167998 Msa0012070:CDS
GAAGAAAGGCTCACAGAATT+GGG 0.402379 1_1:+18169674 Msa0012070:CDS
ATATTGGTGGCTTACAGGTT+AGG 0.411623 1_1:+18169816 Msa0012070:CDS
GGTGGTGAAGGGGTGGCGAT+TGG 0.413351 1_1:-18167734 None:intergenic
GGTAATAGGGAGAAGCTCTT+TGG 0.421313 1_1:+18170286 Msa0012070:CDS
TTTCCTAAACCCGGGTAATA+GGG 0.421959 1_1:+18170273 Msa0012070:CDS
GGTGGTTGGTGGTGGTGAAG+GGG 0.423936 1_1:-18167744 None:intergenic
TCCTTCTCTTCCGCTGGGAC+AGG 0.425236 1_1:-18169548 None:intergenic
AGGAGATTCCGGAGGTATGC+AGG 0.432250 1_1:+18169567 Msa0012070:CDS
GGAAGGGAATGTTTGTGTGT+GGG 0.434295 1_1:-18167676 None:intergenic
CTGAAGCGTGTCACGCCAGC+TGG 0.442761 1_1:-18168194 None:intergenic
GGTTGGTGGTGGTGAAGGGG+TGG 0.443343 1_1:-18167741 None:intergenic
AGCGGAAGAGAAGGAGATTC+CGG 0.446303 1_1:+18169556 Msa0012070:CDS
TTCTTTAAGAAAGAGCTTGA+TGG 0.447736 1_1:+18170385 Msa0012070:CDS
GATTGTGGGAATTTCTGGTT+GGG 0.452096 1_1:-18167927 None:intergenic
GAAGGGAATGTTTGTGTGTG+GGG 0.453029 1_1:-18167675 None:intergenic
AGTGAGGTCAGATAGAGTTT+CGG 0.456213 1_1:-18167888 None:intergenic
TACCGTAGGGAGATGGGAAC+TGG 0.456266 1_1:+18168127 Msa0012070:CDS
TGATAAATTTGTATATTATG+TGG 0.463554 1_1:-18170580 None:intergenic
TTCTCTGCTGATGTTAGCTC+TGG 0.467059 1_1:-18170316 None:intergenic
TGTTTCGTCGAAGTCTTTCA+CGG 0.467972 1_1:-18167798 None:intergenic
ACCTTCTTCCTCTCGTCCGC+AGG 0.470158 1_1:-18168103 None:intergenic
GGTGATGAGACGGTGGTTGG+TGG 0.471586 1_1:-18167755 None:intergenic
TATGTGGTTTGTATATTATG+TGG 0.471744 1_1:-18170564 None:intergenic
GTTATGAATTGAATGAATGA+TGG 0.471923 1_1:-18167698 None:intergenic
TCGCTTCTAAAGCTGCCAGC+TGG 0.472617 1_1:+18168179 Msa0012070:CDS
GATGAGACGGTGGTTGGTGG+TGG 0.480200 1_1:-18167752 None:intergenic
GAAGGTGTACCGTAGGGAGA+TGG 0.481378 1_1:+18168120 Msa0012070:CDS
CGATTGTGGGAATTTCTGGT+TGG 0.482129 1_1:-18167928 None:intergenic
GATTAGGCTGAGGGCAAAAT+GGG 0.486909 1_1:-18169733 None:intergenic
TCAATTCCGGCGCGACTCCA+TGG 0.487105 1_1:-18168039 None:intergenic
TCAATTCTCATGCAGATCCT+GGG 0.490704 1_1:+18169768 Msa0012070:CDS
CCGTGGCTCGTTAGAAGGAT+TGG 0.491190 1_1:-18170236 None:intergenic
ACCTCCTTCCTGCATACCTC+CGG 0.492923 1_1:-18169575 None:intergenic
ACCTGTCCCAGCGGAAGAGA+AGG 0.494521 1_1:+18169547 Msa0012070:CDS
CTGATCAACGACAGCGGCAC+GGG 0.496866 1_1:-18167972 None:intergenic
GTATTGTTGCAGGATCATAT+TGG 0.500449 1_1:+18169800 Msa0012070:CDS
GTAATAGTAACTTTGTAAGA+TGG 0.504268 1_1:+18170480 Msa0012070:three_prime_UTR
GGCTTGTTGAGTGAAGGGTT+AGG 0.506041 1_1:+18169644 Msa0012070:CDS
GAGGGCAAAATGGGTAATAG+TGG 0.511066 1_1:-18169724 None:intergenic
GGGAAGGGAATGTTTGTGTG+TGG 0.513444 1_1:-18167677 None:intergenic
CAGAATTGGGTTTGTCGCAA+GGG 0.514313 1_1:+18169687 Msa0012070:CDS
TTGCTGGGCTTGTTGAGTGA+AGG 0.516325 1_1:+18169638 Msa0012070:CDS
CCAAGCCGTTACACTAATCT+GGG 0.517782 1_1:+18170629 Msa0012070:three_prime_UTR
TATGGCTGAGAGGTCGATTG+TGG 0.519394 1_1:-18167942 None:intergenic
AGAGGAAGAAGGTGTACCGT+AGG 0.520273 1_1:+18168113 Msa0012070:CDS
ACAGAATTGGGTTTGTCGCA+AGG 0.525999 1_1:+18169686 Msa0012070:CDS
AAATTCCCAGATTAGTGTAA+CGG 0.529367 1_1:-18170634 None:intergenic
TGCTGGGCTTGTTGAGTGAA+GGG 0.531596 1_1:+18169639 Msa0012070:CDS
TGACATTAATCCAACCATGT+TGG 0.533450 1_1:-18169841 None:intergenic
AGGTTAGGTCCCAACATGGT+TGG 0.535641 1_1:+18169831 Msa0012070:CDS
AAGAGCTTCTCCCTATTACC+CGG 0.538989 1_1:-18170283 None:intergenic
GAATCTCCTTCTCTTCCGCT+GGG 0.540070 1_1:-18169553 None:intergenic
CCCAGATTAGTGTAACGGCT+TGG 0.541504 1_1:-18170629 None:intergenic
GGTGGGTGAATGAAGAAAGA+TGG 0.543986 1_1:-18167866 None:intergenic
AAGGTGTACCGTAGGGAGAT+GGG 0.544203 1_1:+18168121 Msa0012070:CDS
ATGGCTGAGAGGTCGATTGT+GGG 0.548872 1_1:-18167941 None:intergenic
CGCTCAACGAATTTATGACA+AGG 0.549583 1_1:+18170362 Msa0012070:CDS
TTTGTCGCAAGGGAGGGTGA+TGG 0.551800 1_1:+18169697 Msa0012070:CDS
CAACGACAGCGGCACGGGAA+TGG 0.552804 1_1:-18167967 None:intergenic
GACTTCGACGAAACAAAATC+CGG 0.555299 1_1:+18167806 Msa0012070:CDS
GTGAAATCTCTATAAAGAGC+TGG 0.556464 1_1:-18170340 None:intergenic
TTATGAATTGAATGAATGAT+GGG 0.558085 1_1:-18167697 None:intergenic
TTGTTGCAGGATCATATTGG+TGG 0.559461 1_1:+18169803 Msa0012070:CDS
AATTGGGTTTGTCGCAAGGG+AGG 0.563814 1_1:+18169690 Msa0012070:CDS
CCAATCCTTCTAACGAGCCA+CGG 0.564324 1_1:+18170236 Msa0012070:CDS
GGTATGCAGGAAGGAGGTCA+TGG 0.565254 1_1:+18169580 Msa0012070:CDS
CAATCCTTCTAACGAGCCAC+GGG 0.566309 1_1:+18170237 Msa0012070:CDS
TTGAGTCCAACGGTAAGATT+AGG 0.566485 1_1:-18169749 None:intergenic
GGTTAGGATTACGTGAAGAA+AGG 0.568337 1_1:+18169660 Msa0012070:CDS
ATTGGGTTTGTCGCAAGGGA+GGG 0.570147 1_1:+18169691 Msa0012070:CDS
AACAATACTGTCAATGCCCC+AGG 0.574218 1_1:-18169785 None:intergenic
GGTGGTGATGAGACGGTGGT+TGG 0.574489 1_1:-18167758 None:intergenic
TTCTTTCAAGTGATCAACCA+TGG 0.576207 1_1:+18168022 Msa0012070:CDS
AATAAGTACTCCCTCCGTCT+CGG 0.578600 1_1:-18167626 None:intergenic
AGAGCTTCTCCCTATTACCC+GGG 0.579455 1_1:-18170282 None:intergenic
GCTGATGTTAGCTCTGGTAA+AGG 0.581133 1_1:-18170310 None:intergenic
CAGGAAGGAGGTCATGGAGT+GGG 0.584884 1_1:+18169586 Msa0012070:CDS
TCGCAAGGGAGGGTGATGGT+TGG 0.589053 1_1:+18169701 Msa0012070:CDS
GAGGAAGAAGGTGTACCGTA+GGG 0.589131 1_1:+18168114 Msa0012070:CDS
GAATTGAATGAATGATGGGA+AGG 0.591868 1_1:-18167693 None:intergenic
CACCAGTTCCCATCTCCCTA+CGG 0.596077 1_1:-18168129 None:intergenic
GCTGATCAACGACAGCGGCA+CGG 0.596266 1_1:-18167973 None:intergenic
ATAACCAAAGCTCCATCAAG+AGG 0.600498 1_1:-18169866 None:intergenic
CCTCAGCCTAATCTTACCGT+TGG 0.602504 1_1:+18169743 Msa0012070:CDS
ATGAACAGCCTGCGGACGAG+AGG 0.602972 1_1:+18168095 Msa0012070:CDS
GGATAAAGAAGTGGTTCGTG+TGG 0.605239 1_1:+18169607 Msa0012070:CDS
GCCTGCGGACGAGAGGAAGA+AGG 0.605646 1_1:+18168102 Msa0012070:CDS
GTCTCAGATAATTTCGAACG+AGG 0.609437 1_1:+18170183 Msa0012070:intron
AATTGAATGAATGATGGGAA+GGG 0.610617 1_1:-18167692 None:intergenic
GTAAAAGGCTTAATCGACTC+CGG 0.613520 1_1:+18167830 Msa0012070:CDS
GTGAATGAAGAAAGATGGAA+TGG 0.616875 1_1:-18167861 None:intergenic
GTCTGTTATTCCGAGACGGA+GGG 0.618898 1_1:+18167616 Msa0012070:five_prime_UTR
CAACGGTAAGATTAGGCTGA+GGG 0.624561 1_1:-18169742 None:intergenic
CAATTCTCATGCAGATCCTG+GGG 0.624564 1_1:+18169769 Msa0012070:CDS
CCAACGGTAAGATTAGGCTG+AGG 0.627839 1_1:-18169743 None:intergenic
GTCGTACGGTGGTGATGAGA+CGG 0.634248 1_1:-18167765 None:intergenic
GATCAACCATGGAGTCGCGC+CGG 0.634384 1_1:+18168033 Msa0012070:CDS
GATTCCGGAGGTATGCAGGA+AGG 0.635167 1_1:+18169571 Msa0012070:CDS
ATGGGTCTGTTATTCCGAGA+CGG 0.635699 1_1:+18167612 Msa0012070:five_prime_UTR
CATGGAGTGGGATAAAGAAG+TGG 0.636273 1_1:+18169598 Msa0012070:CDS
GATAAAGAAGTGGTTCGTGT+GGG 0.638210 1_1:+18169608 Msa0012070:CDS
AGAAATCTGATCGTGGAGTG+AGG 0.641872 1_1:-18167904 None:intergenic
GAATCCAAACGTACTTGCAG+CGG 0.644221 1_1:-18168002 None:intergenic
GGTCTGTTATTCCGAGACGG+AGG 0.646358 1_1:+18167615 Msa0012070:five_prime_UTR
TCCGGAGGTATGCAGGAAGG+AGG 0.655340 1_1:+18169574 Msa0012070:CDS
AGGTCAGATAGAGTTTCGGG+TGG 0.668069 1_1:-18167884 None:intergenic
TTACAGGTTAGGTCCCAACA+TGG 0.668383 1_1:+18169827 Msa0012070:CDS
GAAGTTTCATGAACAGCCTG+CGG 0.668945 1_1:+18168087 Msa0012070:CDS
GGAAGAGAAGGAGATTCCGG+AGG 0.687285 1_1:+18169559 Msa0012070:CDS
GGGAATGGTTTATGGCTGAG+AGG 0.688908 1_1:-18167952 None:intergenic
GGTTGGGAGAAATCTGATCG+TGG 0.689784 1_1:-18167911 None:intergenic
GCAGGAAGGAGGTCATGGAG+TGG 0.690360 1_1:+18169585 Msa0012070:CDS
TAGAAGGATTGGCTAATACA+CGG 0.694993 1_1:-18170225 None:intergenic
GGTCAGATAGAGTTTCGGGT+GGG 0.698833 1_1:-18167883 None:intergenic
GTGATGTATCTATAAAGCAG+CGG 0.709204 1_1:+18170435 Msa0012070:exon
AAAACAGCAATCGAGACCCG+TGG 0.709361 1_1:-18170253 None:intergenic
ACGAAGCTGATCAACGACAG+CGG 0.715398 1_1:-18167978 None:intergenic
TGCATGAGAATTGAGTCCAA+CGG 0.715845 1_1:-18169759 None:intergenic
TAAGATGGGACCTGTCCCAG+CGG 0.729083 1_1:+18169538 Msa0012070:CDS
GTACGGTGGTGATGAGACGG+TGG 0.734372 1_1:-18167762 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTCAATTAAGATTACA+TGG + chr1_1:18168639-18168658 Msa0012070:intron 15.0%
!!! TTTTTCAATTAAGATTACAT+GGG + chr1_1:18168640-18168659 Msa0012070:intron 15.0%
!!! TCAGTTAGTTAATTATTTTT+TGG + chr1_1:18169079-18169098 Msa0012070:intron 15.0%
!! TATGTATGTATGTATATATT+AGG + chr1_1:18170524-18170543 Msa0012070:three_prime_UTR 15.0%
!! TGATAAATTTGTATATTATG+TGG - chr1_1:18170583-18170602 None:intergenic 15.0%
!! TTATGAATTGAATGAATGAT+GGG - chr1_1:18167700-18167719 None:intergenic 20.0%
!! TTGACAAAATTTGTATTGTT+CGG + chr1_1:18168543-18168562 Msa0012070:intron 20.0%
!! TGTAAATTATGAAATTCAGT+TGG + chr1_1:18168980-18168999 Msa0012070:intron 20.0%
!!! AATTTAGTTTCTAAAATTGC+AGG + chr1_1:18169327-18169346 Msa0012070:intron 20.0%
!! TTATTCAAAAAGAAAAGACA+AGG - chr1_1:18169950-18169969 None:intergenic 20.0%
!!! GAAAATTTATTGTGTTTTGA+TGG + chr1_1:18170043-18170062 Msa0012070:intron 20.0%
!! TGAGAAATCCAAATTAAAAA+AGG - chr1_1:18170149-18170168 None:intergenic 20.0%
!!! ATTATCTGAGACAAAAATTA+TGG - chr1_1:18170175-18170194 None:intergenic 20.0%
! GTTATGAATTGAATGAATGA+TGG - chr1_1:18167701-18167720 None:intergenic 25.0%
! ATAAGCTTGTGAAAAAATGA+CGG + chr1_1:18168711-18168730 Msa0012070:intron 25.0%
!! AGACATAATTTTGAGCTTAT+AGG - chr1_1:18168783-18168802 None:intergenic 25.0%
! AAGTTGAAGTAAACTTGAAA+AGG + chr1_1:18168867-18168886 Msa0012070:intron 25.0%
! AGTTGAAGTAAACTTGAAAA+GGG + chr1_1:18168868-18168887 Msa0012070:intron 25.0%
!! AGTTAACAGAATTTTTCTCA+TGG - chr1_1:18168898-18168917 None:intergenic 25.0%
!! TACAATTTTCAGAACCAAAA+TGG + chr1_1:18169481-18169500 Msa0012070:intron 25.0%
!! ATAAGGATGAAATACCATTT+TGG - chr1_1:18169498-18169517 None:intergenic 25.0%
!! GTATTTCATCCTTATTTCAA+TGG + chr1_1:18169503-18169522 Msa0012070:intron 25.0%
! TGCAAAATTCCATTGAAATA+AGG - chr1_1:18169515-18169534 None:intergenic 25.0%
! CAATATTGGAGATTTATTTC+AGG + chr1_1:18169889-18169908 Msa0012070:CDS 25.0%
!! ATGTTCACATCAATTTTTCA+AGG + chr1_1:18170014-18170033 Msa0012070:intron 25.0%
!!! TTTGCTGTCCTTTTTTAATT+TGG + chr1_1:18170138-18170157 Msa0012070:intron 25.0%
! GTAATAGTAACTTTGTAAGA+TGG + chr1_1:18170480-18170499 Msa0012070:three_prime_UTR 25.0%
!! TATGTGGTTTGTATATTATG+TGG - chr1_1:18170567-18170586 None:intergenic 25.0%
! AATTGAATGAATGATGGGAA+GGG - chr1_1:18167695-18167714 None:intergenic 30.0%
AACTTAATTGAGCAACGAAA+AGG + chr1_1:18168348-18168367 Msa0012070:intron 30.0%
TTATAAGAGATAGCTGATAG+TGG + chr1_1:18168407-18168426 Msa0012070:intron 30.0%
! AGCTGACAGAATTTTATGAA+CGG + chr1_1:18168437-18168456 Msa0012070:intron 30.0%
TTATAACAGATAGCTGATAG+CGG + chr1_1:18168511-18168530 Msa0012070:intron 30.0%
GTATTGTTCGGTAGAATTAA+TGG + chr1_1:18168555-18168574 Msa0012070:intron 30.0%
AAAAAATGACGGTTACCAAA+CGG + chr1_1:18168722-18168741 Msa0012070:intron 30.0%
TTGACTAAAAAAGATCCGTT+TGG - chr1_1:18168740-18168759 None:intergenic 30.0%
!! CATTCATGCTTTTTGTAGAA+AGG - chr1_1:18168924-18168943 None:intergenic 30.0%
TTGCAAGAATGAGTTTATGT+TGG + chr1_1:18169025-18169044 Msa0012070:intron 30.0%
GAAAAACATGAAGAGCTTAA+AGG - chr1_1:18169192-18169211 None:intergenic 30.0%
ATGTTACTCACACACTAAAT+AGG + chr1_1:18169248-18169267 Msa0012070:intron 30.0%
ATGAAAGACTGATCAAATTG+AGG - chr1_1:18169381-18169400 None:intergenic 30.0%
ATTAACATGATCAACCCAAT+GGG + chr1_1:18169414-18169433 Msa0012070:intron 30.0%
! TGGAATTTTGCAGATTAAGA+TGG + chr1_1:18169523-18169542 Msa0012070:intron 30.0%
! GGAATTTTGCAGATTAAGAT+GGG + chr1_1:18169524-18169543 Msa0012070:intron 30.0%
CACAATCACAAAACACTAAT+TGG - chr1_1:18170087-18170106 None:intergenic 30.0%
! TTCTTTAAGAAAGAGCTTGA+TGG + chr1_1:18170385-18170404 Msa0012070:CDS 30.0%
!!! GGTTTGGGTTTTGATTTTGA+AGG - chr1_1:18167657-18167676 None:intergenic 35.0%
! GAATTGAATGAATGATGGGA+AGG - chr1_1:18167696-18167715 None:intergenic 35.0%
!!! AGATGGAATGGTTTTGATTC+CGG - chr1_1:18167852-18167871 None:intergenic 35.0%
GTGAATGAAGAAAGATGGAA+TGG - chr1_1:18167864-18167883 None:intergenic 35.0%
! TTCTTTCAAGTGATCAACCA+TGG + chr1_1:18168022-18168041 Msa0012070:CDS 35.0%
ATAACGTTTCGCATCAATTC+CGG - chr1_1:18168055-18168074 None:intergenic 35.0%
GAATTGATGCGAAACGTTAT+TGG + chr1_1:18168055-18168074 Msa0012070:CDS 35.0%
CCAGGATGTGTTTATGATTT+CGG - chr1_1:18168303-18168322 None:intergenic 35.0%
GTTGAAAAACCAGCTTATAG+CGG + chr1_1:18168482-18168501 Msa0012070:intron 35.0%
TGATCAAACGTATCAGAAGA+AGG - chr1_1:18169229-18169248 None:intergenic 35.0%
GATTAACATGATCAACCCAA+TGG + chr1_1:18169413-18169432 Msa0012070:intron 35.0%
GTATTGTTGCAGGATCATAT+TGG + chr1_1:18169800-18169819 Msa0012070:CDS 35.0%
GACATTAATCCAACCATGTT+GGG - chr1_1:18169843-18169862 None:intergenic 35.0%
TGACATTAATCCAACCATGT+TGG - chr1_1:18169844-18169863 None:intergenic 35.0%
ATTAATGTCAAGCCTCTTGA+TGG + chr1_1:18169854-18169873 Msa0012070:CDS 35.0%
! GGAGCTTTGGTTATCAATAT+TGG + chr1_1:18169875-18169894 Msa0012070:CDS 35.0%
!!! TGTGTTTTGATGGAAATCAC+AGG + chr1_1:18170053-18170072 Msa0012070:intron 35.0%
!!! GTGTTTTGATGGAAATCACA+GGG + chr1_1:18170054-18170073 Msa0012070:intron 35.0%
CTTGGCATTACGAAAAGAAA+AGG - chr1_1:18170115-18170134 None:intergenic 35.0%
AAAAAGGACAGCAAAATGCT+TGG - chr1_1:18170133-18170152 None:intergenic 35.0%
!! TAGAAGGATTGGCTAATACA+CGG - chr1_1:18170228-18170247 None:intergenic 35.0%
GTGAAATCTCTATAAAGAGC+TGG - chr1_1:18170343-18170362 None:intergenic 35.0%
GTGATGTATCTATAAAGCAG+CGG + chr1_1:18170435-18170454 Msa0012070:exon 35.0%
AATGTTTGTGTGTGGGGTTT+GGG - chr1_1:18167672-18167691 None:intergenic 40.0%
! AGTCTTTCACGGCTTTTACA+CGG - chr1_1:18167790-18167809 None:intergenic 40.0%
TGTTTCGTCGAAGTCTTTCA+CGG - chr1_1:18167801-18167820 None:intergenic 40.0%
GACTTCGACGAAACAAAATC+CGG + chr1_1:18167806-18167825 Msa0012070:CDS 40.0%
GAAACAAAATCCGGCGTAAA+AGG + chr1_1:18167815-18167834 Msa0012070:CDS 40.0%
! GTAAAAGGCTTAATCGACTC+CGG + chr1_1:18167830-18167849 Msa0012070:CDS 40.0%
AGTGAGGTCAGATAGAGTTT+CGG - chr1_1:18167891-18167910 None:intergenic 40.0%
!! GATTGTGGGAATTTCTGGTT+GGG - chr1_1:18167930-18167949 None:intergenic 40.0%
CCGAAATCATAAACACATCC+TGG + chr1_1:18168300-18168319 Msa0012070:intron 40.0%
TAAGTTCATCCGCTATAAGC+TGG - chr1_1:18168494-18168513 None:intergenic 40.0%
ATTACATGGGTAAAGCTGAG+AGG + chr1_1:18168653-18168672 Msa0012070:intron 40.0%
GTTTACTGATCGTTGCTTAC+AGG + chr1_1:18169056-18169075 Msa0012070:intron 40.0%
GATAAAGAAGTGGTTCGTGT+GGG + chr1_1:18169608-18169627 Msa0012070:CDS 40.0%
GGTTAGGATTACGTGAAGAA+AGG + chr1_1:18169660-18169679 Msa0012070:CDS 40.0%
TGAAGAAAGGCTCACAGAAT+TGG + chr1_1:18169673-18169692 Msa0012070:CDS 40.0%
GAAGAAAGGCTCACAGAATT+GGG + chr1_1:18169674-18169693 Msa0012070:CDS 40.0%
TTGAGTCCAACGGTAAGATT+AGG - chr1_1:18169752-18169771 None:intergenic 40.0%
TGCATGAGAATTGAGTCCAA+CGG - chr1_1:18169762-18169781 None:intergenic 40.0%
TCAATTCTCATGCAGATCCT+GGG + chr1_1:18169768-18169787 Msa0012070:CDS 40.0%
TTGTTGCAGGATCATATTGG+TGG + chr1_1:18169803-18169822 Msa0012070:CDS 40.0%
! ATATTGGTGGCTTACAGGTT+AGG + chr1_1:18169816-18169835 Msa0012070:CDS 40.0%
ATAACCAAAGCTCCATCAAG+AGG - chr1_1:18169869-18169888 None:intergenic 40.0%
GATGGAAATCACAGGGTTAA+TGG + chr1_1:18170061-18170080 Msa0012070:intron 40.0%
GTCTCAGATAATTTCGAACG+AGG + chr1_1:18170183-18170202 Msa0012070:intron 40.0%
!!! GATTGCTGTTTTCCTAAACC+CGG + chr1_1:18170264-18170283 Msa0012070:CDS 40.0%
!!! ATTGCTGTTTTCCTAAACCC+GGG + chr1_1:18170265-18170284 Msa0012070:CDS 40.0%
! TTTTCCTAAACCCGGGTAAT+AGG + chr1_1:18170272-18170291 Msa0012070:CDS 40.0%
TTTCCTAAACCCGGGTAATA+GGG + chr1_1:18170273-18170292 Msa0012070:CDS 40.0%
CGCTCAACGAATTTATGACA+AGG + chr1_1:18170362-18170381 Msa0012070:CDS 40.0%
ATCTATAAAGCAGCGGTTTC+TGG + chr1_1:18170442-18170461 Msa0012070:three_prime_UTR 40.0%
ATGGGTCTGTTATTCCGAGA+CGG + chr1_1:18167612-18167631 Msa0012070:five_prime_UTR 45.0%
AATAAGTACTCCCTCCGTCT+CGG - chr1_1:18167629-18167648 None:intergenic 45.0%
GAATGTTTGTGTGTGGGGTT+TGG - chr1_1:18167673-18167692 None:intergenic 45.0%
GAAGGGAATGTTTGTGTGTG+GGG - chr1_1:18167678-18167697 None:intergenic 45.0%
GGAAGGGAATGTTTGTGTGT+GGG - chr1_1:18167679-18167698 None:intergenic 45.0%
! GTCGATTAAGCCTTTTACGC+CGG - chr1_1:18167828-18167847 None:intergenic 45.0%
GGTGGGTGAATGAAGAAAGA+TGG - chr1_1:18167869-18167888 None:intergenic 45.0%
GTGAGGTCAGATAGAGTTTC+GGG - chr1_1:18167890-18167909 None:intergenic 45.0%
AGAAATCTGATCGTGGAGTG+AGG - chr1_1:18167907-18167926 None:intergenic 45.0%
!! CGATTGTGGGAATTTCTGGT+TGG - chr1_1:18167931-18167950 None:intergenic 45.0%
AGGTCGATTGTGGGAATTTC+TGG - chr1_1:18167935-18167954 None:intergenic 45.0%
GAATCCAAACGTACTTGCAG+CGG - chr1_1:18168005-18168024 None:intergenic 45.0%
GAAGTTTCATGAACAGCCTG+CGG + chr1_1:18168087-18168106 Msa0012070:CDS 45.0%
TCGAGCACATTAGTCCCATT+GGG - chr1_1:18169431-18169450 None:intergenic 45.0%
CATGGAGTGGGATAAAGAAG+TGG + chr1_1:18169598-18169617 Msa0012070:CDS 45.0%
GGATAAAGAAGTGGTTCGTG+TGG + chr1_1:18169607-18169626 Msa0012070:CDS 45.0%
! TCGTGTGGGAGATATTTTGC+TGG + chr1_1:18169622-18169641 Msa0012070:CDS 45.0%
! CGTGTGGGAGATATTTTGCT+GGG + chr1_1:18169623-18169642 Msa0012070:CDS 45.0%
ACAGAATTGGGTTTGTCGCA+AGG + chr1_1:18169686-18169705 Msa0012070:CDS 45.0%
CAGAATTGGGTTTGTCGCAA+GGG + chr1_1:18169687-18169706 Msa0012070:CDS 45.0%
GAGGGCAAAATGGGTAATAG+TGG - chr1_1:18169727-18169746 None:intergenic 45.0%
GATTAGGCTGAGGGCAAAAT+GGG - chr1_1:18169736-18169755 None:intergenic 45.0%
AGATTAGGCTGAGGGCAAAA+TGG - chr1_1:18169737-18169756 None:intergenic 45.0%
CAACGGTAAGATTAGGCTGA+GGG - chr1_1:18169745-18169764 None:intergenic 45.0%
CTCAATTCTCATGCAGATCC+TGG + chr1_1:18169767-18169786 Msa0012070:CDS 45.0%
CAATTCTCATGCAGATCCTG+GGG + chr1_1:18169769-18169788 Msa0012070:CDS 45.0%
AACAATACTGTCAATGCCCC+AGG - chr1_1:18169788-18169807 None:intergenic 45.0%
!! GGCATTGACAGTATTGTTGC+AGG + chr1_1:18169790-18169809 Msa0012070:CDS 45.0%
! GGATCATATTGGTGGCTTAC+AGG + chr1_1:18169811-18169830 Msa0012070:CDS 45.0%
TTACAGGTTAGGTCCCAACA+TGG + chr1_1:18169827-18169846 Msa0012070:CDS 45.0%
AAGAGCTTCTCCCTATTACC+CGG - chr1_1:18170286-18170305 None:intergenic 45.0%
GGTAATAGGGAGAAGCTCTT+TGG + chr1_1:18170286-18170305 Msa0012070:CDS 45.0%
!! GCTGATGTTAGCTCTGGTAA+AGG - chr1_1:18170313-18170332 None:intergenic 45.0%
TTCTCTGCTGATGTTAGCTC+TGG - chr1_1:18170319-18170338 None:intergenic 45.0%
GTCTGTTATTCCGAGACGGA+GGG + chr1_1:18167616-18167635 Msa0012070:five_prime_UTR 50.0%
GGGAAGGGAATGTTTGTGTG+TGG - chr1_1:18167680-18167699 None:intergenic 50.0%
! ACGGCTTTTACACGGTCGTA+CGG - chr1_1:18167782-18167801 None:intergenic 50.0%
! GGTCAGATAGAGTTTCGGGT+GGG - chr1_1:18167886-18167905 None:intergenic 50.0%
AGGTCAGATAGAGTTTCGGG+TGG - chr1_1:18167887-18167906 None:intergenic 50.0%
GGTTGGGAGAAATCTGATCG+TGG - chr1_1:18167914-18167933 None:intergenic 50.0%
ATGGCTGAGAGGTCGATTGT+GGG - chr1_1:18167944-18167963 None:intergenic 50.0%
TATGGCTGAGAGGTCGATTG+TGG - chr1_1:18167945-18167964 None:intergenic 50.0%
GGGAATGGTTTATGGCTGAG+AGG - chr1_1:18167955-18167974 None:intergenic 50.0%
ACGAAGCTGATCAACGACAG+CGG - chr1_1:18167981-18168000 None:intergenic 50.0%
! AGAGGAAGAAGGTGTACCGT+AGG + chr1_1:18168113-18168132 Msa0012070:CDS 50.0%
! GAGGAAGAAGGTGTACCGTA+GGG + chr1_1:18168114-18168133 Msa0012070:CDS 50.0%
AAGGTGTACCGTAGGGAGAT+GGG + chr1_1:18168121-18168140 Msa0012070:CDS 50.0%
ACACATCCTGGTGTCTCTTG+TGG + chr1_1:18168312-18168331 Msa0012070:intron 50.0%
TTACTGCCACAAGAGACACC+AGG - chr1_1:18168321-18168340 None:intergenic 50.0%
GTCGAGCACATTAGTCCCAT+TGG - chr1_1:18169432-18169451 None:intergenic 50.0%
GAATCTCCTTCTCTTCCGCT+GGG - chr1_1:18169556-18169575 None:intergenic 50.0%
AGCGGAAGAGAAGGAGATTC+CGG + chr1_1:18169556-18169575 Msa0012070:CDS 50.0%
!! TTGCTGGGCTTGTTGAGTGA+AGG + chr1_1:18169638-18169657 Msa0012070:CDS 50.0%
!! TGCTGGGCTTGTTGAGTGAA+GGG + chr1_1:18169639-18169658 Msa0012070:CDS 50.0%
!! GGCTTGTTGAGTGAAGGGTT+AGG + chr1_1:18169644-18169663 Msa0012070:CDS 50.0%
AATTGGGTTTGTCGCAAGGG+AGG + chr1_1:18169690-18169709 Msa0012070:CDS 50.0%
ATTGGGTTTGTCGCAAGGGA+GGG + chr1_1:18169691-18169710 Msa0012070:CDS 50.0%
CCAACGGTAAGATTAGGCTG+AGG - chr1_1:18169746-18169765 None:intergenic 50.0%
CCTCAGCCTAATCTTACCGT+TGG + chr1_1:18169743-18169762 Msa0012070:CDS 50.0%
AGGTTAGGTCCCAACATGGT+TGG + chr1_1:18169831-18169850 Msa0012070:CDS 50.0%
CAAGCCTCTTGATGGAGCTT+TGG + chr1_1:18169862-18169881 Msa0012070:CDS 50.0%
CCAATCCTTCTAACGAGCCA+CGG + chr1_1:18170236-18170255 Msa0012070:CDS 50.0%
CAATCCTTCTAACGAGCCAC+GGG + chr1_1:18170237-18170256 Msa0012070:CDS 50.0%
AAAACAGCAATCGAGACCCG+TGG - chr1_1:18170256-18170275 None:intergenic 50.0%
TCTCCCTATTACCCGGGTTT+AGG - chr1_1:18170279-18170298 None:intergenic 50.0%
AGAGCTTCTCCCTATTACCC+GGG - chr1_1:18170285-18170304 None:intergenic 50.0%
GGTCTGTTATTCCGAGACGG+AGG + chr1_1:18167615-18167634 Msa0012070:five_prime_UTR 55.0%
! GTCGTACGGTGGTGATGAGA+CGG - chr1_1:18167768-18167787 None:intergenic 55.0%
! GCTTTTACACGGTCGTACGG+TGG - chr1_1:18167779-18167798 None:intergenic 55.0%
AGCGGCACGGGAATGGTTTA+TGG - chr1_1:18167963-18167982 None:intergenic 55.0%
CGTTCCGCTGCAAGTACGTT+TGG + chr1_1:18167998-18168017 Msa0012070:CDS 55.0%
! GAAGGTGTACCGTAGGGAGA+TGG + chr1_1:18168120-18168139 Msa0012070:CDS 55.0%
TACCGTAGGGAGATGGGAAC+TGG + chr1_1:18168127-18168146 Msa0012070:CDS 55.0%
CACCAGTTCCCATCTCCCTA+CGG - chr1_1:18168132-18168151 None:intergenic 55.0%
!! TCGCTTCTAAAGCTGCCAGC+TGG + chr1_1:18168179-18168198 Msa0012070:CDS 55.0%
TAAGATGGGACCTGTCCCAG+CGG + chr1_1:18169538-18169557 Msa0012070:CDS 55.0%
GGAATCTCCTTCTCTTCCGC+TGG - chr1_1:18169557-18169576 None:intergenic 55.0%
GGAAGAGAAGGAGATTCCGG+AGG + chr1_1:18169559-18169578 Msa0012070:CDS 55.0%
! AGGAGATTCCGGAGGTATGC+AGG + chr1_1:18169567-18169586 Msa0012070:CDS 55.0%
! GATTCCGGAGGTATGCAGGA+AGG + chr1_1:18169571-18169590 Msa0012070:CDS 55.0%
ACCTCCTTCCTGCATACCTC+CGG - chr1_1:18169578-18169597 None:intergenic 55.0%
GGTATGCAGGAAGGAGGTCA+TGG + chr1_1:18169580-18169599 Msa0012070:CDS 55.0%
CAGGAAGGAGGTCATGGAGT+GGG + chr1_1:18169586-18169605 Msa0012070:CDS 55.0%
TTTGTCGCAAGGGAGGGTGA+TGG + chr1_1:18169697-18169716 Msa0012070:CDS 55.0%
CCGTGGCTCGTTAGAAGGAT+TGG - chr1_1:18170239-18170258 None:intergenic 55.0%
!! GGTGGTTGGTGGTGGTGAAG+GGG - chr1_1:18167747-18167766 None:intergenic 60.0%
!! CGGTGGTTGGTGGTGGTGAA+GGG - chr1_1:18167748-18167767 None:intergenic 60.0%
!! ACGGTGGTTGGTGGTGGTGA+AGG - chr1_1:18167749-18167768 None:intergenic 60.0%
!! GATGAGACGGTGGTTGGTGG+TGG - chr1_1:18167755-18167774 None:intergenic 60.0%
GGTGATGAGACGGTGGTTGG+TGG - chr1_1:18167758-18167777 None:intergenic 60.0%
! GGTGGTGATGAGACGGTGGT+TGG - chr1_1:18167761-18167780 None:intergenic 60.0%
! GTACGGTGGTGATGAGACGG+TGG - chr1_1:18167765-18167784 None:intergenic 60.0%
CTGATCAACGACAGCGGCAC+GGG - chr1_1:18167975-18167994 None:intergenic 60.0%
GCTGATCAACGACAGCGGCA+CGG - chr1_1:18167976-18167995 None:intergenic 60.0%
GATCAACCATGGAGTCGCGC+CGG + chr1_1:18168033-18168052 Msa0012070:CDS 60.0%
TCAATTCCGGCGCGACTCCA+TGG - chr1_1:18168042-18168061 None:intergenic 60.0%
ATGAACAGCCTGCGGACGAG+AGG + chr1_1:18168095-18168114 Msa0012070:CDS 60.0%
ACCTTCTTCCTCTCGTCCGC+AGG - chr1_1:18168106-18168125 None:intergenic 60.0%
ACCTGTCCCAGCGGAAGAGA+AGG + chr1_1:18169547-18169566 Msa0012070:CDS 60.0%
TCCTTCTCTTCCGCTGGGAC+AGG - chr1_1:18169551-18169570 None:intergenic 60.0%
! TCCGGAGGTATGCAGGAAGG+AGG + chr1_1:18169574-18169593 Msa0012070:CDS 60.0%
GCAGGAAGGAGGTCATGGAG+TGG + chr1_1:18169585-18169604 Msa0012070:CDS 60.0%
! TCGCAAGGGAGGGTGATGGT+TGG + chr1_1:18169701-18169720 Msa0012070:CDS 60.0%
GAGACCCGTGGCTCGTTAGA+AGG - chr1_1:18170244-18170263 None:intergenic 60.0%
GGTGGTGAAGGGGTGGCGAT+TGG - chr1_1:18167737-18167756 None:intergenic 65.0%
!! GGTTGGTGGTGGTGAAGGGG+TGG - chr1_1:18167744-18167763 None:intergenic 65.0%
CAACGACAGCGGCACGGGAA+TGG - chr1_1:18167970-18167989 None:intergenic 65.0%
GCCTGCGGACGAGAGGAAGA+AGG + chr1_1:18168102-18168121 Msa0012070:CDS 65.0%
CTGAAGCGTGTCACGCCAGC+TGG - chr1_1:18168197-18168216 None:intergenic 65.0%
CAGCTGGCGTGACACGCTTC+AGG + chr1_1:18168195-18168214 Msa0012070:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 18167605 18170650 18167605 ID=Msa0012070;Name=Msa0012070
chr1_1 mRNA 18167605 18170650 18167605 ID=Msa0012070-mRNA-1;Parent=Msa0012070;Name=Msa0012070-mRNA-1;_AED=0.07;_eAED=0.07;_QI=117|1|1|1|1|1|3|212|372
chr1_1 exon 18167605 18168216 18167605 ID=Msa0012070-mRNA-1:exon:6591;Parent=Msa0012070-mRNA-1
chr1_1 exon 18169536 18169910 18169536 ID=Msa0012070-mRNA-1:exon:6592;Parent=Msa0012070-mRNA-1
chr1_1 exon 18170190 18170650 18170190 ID=Msa0012070-mRNA-1:exon:6593;Parent=Msa0012070-mRNA-1
chr1_1 five_prime_UTR 18167605 18167721 18167605 ID=Msa0012070-mRNA-1:five_prime_utr;Parent=Msa0012070-mRNA-1
chr1_1 CDS 18167722 18168216 18167722 ID=Msa0012070-mRNA-1:cds;Parent=Msa0012070-mRNA-1
chr1_1 CDS 18169536 18169910 18169536 ID=Msa0012070-mRNA-1:cds;Parent=Msa0012070-mRNA-1
chr1_1 CDS 18170190 18170438 18170190 ID=Msa0012070-mRNA-1:cds;Parent=Msa0012070-mRNA-1
chr1_1 three_prime_UTR 18170439 18170650 18170439 ID=Msa0012070-mRNA-1:three_prime_utr;Parent=Msa0012070-mRNA-1
Gene Sequence

>Msa0012070

ATGTCATCATCACCAATCGCCACCCCTTCACCACCACCAACCACCGTCTCATCACCACCGTACGACCGTGTAAAAGCCGTGAAAGACTTCGACGAAACAAAATCCGGCGTAAAAGGCTTAATCGACTCCGGAATCAAAACCATTCCATCTTTCTTCATTCACCCACCCGAAACTCTATCTGACCTCACTCCACGATCAGATTTCTCCCAACCAGAAATTCCCACAATCGACCTCTCAGCCATAAACCATTCCCGTGCCGCTGTCGTTGATCAGCTTCGTTCCGCTGCAAGTACGTTTGGATTCTTTCAAGTGATCAACCATGGAGTCGCGCCGGAATTGATGCGAAACGTTATTGGTGCTATGAAGAAGTTTCATGAACAGCCTGCGGACGAGAGGAAGAAGGTGTACCGTAGGGAGATGGGAACTGGTGTTTCGTATATATCAAATGTTGATCTTTTCGCTTCTAAAGCTGCCAGCTGGCGTGACACGCTTCAGATTAAGATGGGACCTGTCCCAGCGGAAGAGAAGGAGATTCCGGAGGTATGCAGGAAGGAGGTCATGGAGTGGGATAAAGAAGTGGTTCGTGTGGGAGATATTTTGCTGGGCTTGTTGAGTGAAGGGTTAGGATTACGTGAAGAAAGGCTCACAGAATTGGGTTTGTCGCAAGGGAGGGTGATGGTTGGCCACTATTACCCATTTTGCCCTCAGCCTAATCTTACCGTTGGACTCAATTCTCATGCAGATCCTGGGGCATTGACAGTATTGTTGCAGGATCATATTGGTGGCTTACAGGTTAGGTCCCAACATGGTTGGATTAATGTCAAGCCTCTTGATGGAGCTTTGGTTATCAATATTGGAGATTTATTTCAGATAATTTCGAACGAGGAGTATAAGAGTGCTGATCACCGTGTATTAGCCAATCCTTCTAACGAGCCACGGGTCTCGATTGCTGTTTTCCTAAACCCGGGTAATAGGGAGAAGCTCTTTGGTCCTTTACCAGAGCTAACATCAGCAGAGAAGCCAGCTCTTTATAGAGATTTCACGCTCAACGAATTTATGACAAGGTTCTTTAAGAAAGAGCTTGATGGTCAATCATTGACTAATTTCTTCAGAAAGTGA
Protein sequence

>Msa0012070

MSSSPIATPSPPPTTVSSPPYDRVKAVKDFDETKSGVKGLIDSGIKTIPSFFIHPPETLSDLTPRSDFSQPEIPTIDLSAINHSRAAVVDQLRSAASTFGFFQVINHGVAPELMRNVIGAMKKFHEQPADERKKVYRREMGTGVSYISNVDLFASKAASWRDTLQIKMGPVPAEEKEIPEVCRKEVMEWDKEVVRVGDILLGLLSEGLGLREERLTELGLSQGRVMVGHYYPFCPQPNLTVGLNSHADPGALTVLLQDHIGGLQVRSQHGWINVKPLDGALVINIGDLFQIISNEEYKSADHRVLANPSNEPRVSIAVFLNPGNREKLFGPLPELTSAEKPALYRDFTLNEFMTRFFKKELDGQSLTNFFRK*