AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0152150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0152150 MtrunA17_Chr1g0161111 92.562 363 27 0 1 363 60 422 0.0 670
Msa0152150 MtrunA17_Chr1g0161081 95.101 347 17 0 21 367 21 367 0.0 654
Msa0152150 MtrunA17_Chr1g0161041 85.831 367 45 1 1 367 31 390 0.0 622
Msa0152150 MtrunA17_Chr7g0266651 51.429 350 163 4 21 365 8 355 4.55e-128 373
Msa0152150 MtrunA17_Chr6g0472861 46.849 365 180 5 14 366 5 367 2.39e-113 336
Msa0152150 MtrunA17_Chr7g0225881 46.067 356 185 2 17 365 8 363 1.07e-111 331
Msa0152150 MtrunA17_Chr1g0184241 43.714 350 187 5 21 366 18 361 4.64e-104 311
Msa0152150 MtrunA17_Chr2g0311831 43.553 349 190 4 22 365 18 364 7.11e-102 306
Msa0152150 MtrunA17_Chr1g0187821 45.225 356 187 4 17 365 9 363 1.01e-100 303
Msa0152150 MtrunA17_Chr2g0311701 41.463 369 206 3 6 365 2 369 4.48e-100 302
Msa0152150 MtrunA17_Chr2g0311761 43.143 350 191 5 22 365 18 365 6.39e-100 301
Msa0152150 MtrunA17_Chr8g0336851 40.336 357 201 5 17 366 7 358 7.33e-100 301
Msa0152150 MtrunA17_Chr8g0336761 42.899 345 186 4 28 366 19 358 2.94e-99 299
Msa0152150 MtrunA17_Chr1g0187831 44.444 360 187 7 17 365 10 367 6.82e-98 297
Msa0152150 MtrunA17_Chr8g0348081 42.029 345 189 4 28 366 19 358 1.33e-97 295
Msa0152150 MtrunA17_Chr1g0187811 43.132 364 192 6 17 366 125 487 1.69e-97 299
Msa0152150 MtrunA17_Chr8g0336631 42.197 346 188 5 28 366 19 359 2.90e-97 294
Msa0152150 MtrunA17_Chr8g0336781 41.618 346 190 5 28 366 54 394 1.06e-96 294
Msa0152150 MtrunA17_Chr8g0354261 40.730 356 197 5 21 366 17 368 2.60e-96 292
Msa0152150 MtrunA17_Chr8g0336751 42.000 350 196 4 21 365 43 390 3.06e-96 293
Msa0152150 MtrunA17_Chr7g0235951 41.926 353 194 4 21 365 17 366 1.62e-95 290
Msa0152150 MtrunA17_Chr2g0311861 42.571 350 174 5 22 366 14 341 3.07e-94 286
Msa0152150 MtrunA17_Chr8g0354241 39.607 356 201 5 21 366 17 368 6.27e-94 286
Msa0152150 MtrunA17_Chr8g0336861 40.634 347 193 6 28 366 19 360 7.54e-94 286
Msa0152150 MtrunA17_Chr2g0311681 41.379 348 194 3 15 353 5 351 1.30e-93 285
Msa0152150 MtrunA17_Chr2g0311711 41.787 347 195 3 17 357 11 356 2.26e-93 285
Msa0152150 MtrunA17_Chr2g0311921 39.316 351 205 5 22 366 4 352 6.95e-92 280
Msa0152150 MtrunA17_Chr4g0055591 41.691 343 193 4 27 365 15 354 7.97e-92 280
Msa0152150 MtrunA17_Chr2g0311691 41.092 348 195 3 15 353 5 351 6.63e-91 278
Msa0152150 MtrunA17_Chr1g0167911 42.045 352 189 7 22 365 5 349 1.19e-90 277
Msa0152150 MtrunA17_Chr1g0167951 42.735 351 187 6 22 365 5 348 1.38e-90 277
Msa0152150 MtrunA17_Chr4g0066121 40.922 347 192 6 14 352 4 345 2.78e-90 276
Msa0152150 MtrunA17_Chr1g0167961 41.714 350 194 6 22 365 20 365 3.27e-90 276
Msa0152150 MtrunA17_Chr7g0247991 43.895 344 182 5 21 356 17 357 8.36e-90 275
Msa0152150 MtrunA17_Chr8g0364471 38.056 360 208 5 17 366 13 367 1.42e-89 275
Msa0152150 MtrunA17_Chr2g0311741 40.498 321 187 2 48 365 2 321 1.17e-87 268
Msa0152150 MtrunA17_Chr7g0236011 41.061 358 198 6 17 365 13 366 1.10e-86 267
Msa0152150 MtrunA17_Chr1g0161101 87.349 166 12 1 168 333 346 502 6.54e-86 270
Msa0152150 MtrunA17_Chr1g0161101 65.060 166 21 3 1 166 82 210 4.04e-54 186
Msa0152150 MtrunA17_Chr8g0335411 40.793 353 198 5 21 365 17 366 7.80e-84 260
Msa0152150 MtrunA17_Chr4g0066991 39.093 353 184 7 21 365 17 346 1.00e-76 241
Msa0152150 MtrunA17_Chr1g0167931 37.784 352 172 6 22 368 5 314 2.62e-76 239
Msa0152150 MtrunA17_Chr7g0235981 37.892 351 179 7 21 365 3 320 9.19e-74 233
Msa0152150 MtrunA17_Chr4g0011311 39.416 274 161 2 21 291 17 288 1.76e-69 221
Msa0152150 MtrunA17_Chr3g0128001 36.474 329 197 7 40 362 5 327 4.51e-61 200
Msa0152150 MtrunA17_Chr8g0362741 38.745 271 152 4 21 291 17 273 7.87e-61 198
Msa0152150 MtrunA17_Chr7g0242551 36.182 351 203 10 37 372 15 359 7.13e-60 198
Msa0152150 MtrunA17_Chr3g0113641 35.652 345 205 9 24 357 2 340 6.02e-59 195
Msa0152150 MtrunA17_Chr2g0311631 34.535 333 202 7 35 357 20 346 1.87e-58 194
Msa0152150 MtrunA17_Chr8g0345831 33.934 333 209 7 43 370 13 339 5.22e-58 192
Msa0152150 MtrunA17_Chr4g0006371 35.882 340 191 8 37 352 14 350 1.11e-57 192
Msa0152150 MtrunA17_Chr3g0093741 35.799 338 200 10 35 363 16 345 1.19e-57 192
Msa0152150 MtrunA17_Chr3g0093751 35.503 338 201 10 35 363 16 345 1.04e-56 189
Msa0152150 MtrunA17_Chr3g0093761 35.503 338 200 11 35 363 16 344 1.71e-55 186
Msa0152150 MtrunA17_Chr5g0437181 35.799 338 198 9 28 352 5 336 2.73e-55 186
Msa0152150 MtrunA17_Chr1g0184121 35.061 328 198 7 43 362 9 329 1.15e-54 184
Msa0152150 MtrunA17_Chr1g0184111 34.451 328 200 7 43 362 9 329 2.02e-54 183
Msa0152150 MtrunA17_Chr5g0421101 32.344 337 212 7 37 365 13 341 6.65e-54 182
Msa0152150 MtrunA17_Chr5g0423191 33.436 326 201 7 48 365 24 341 2.22e-53 181
Msa0152150 MtrunA17_Chr5g0423251 33.436 326 201 7 48 365 24 341 8.89e-53 179
Msa0152150 MtrunA17_Chr5g0421041 32.551 341 206 8 36 365 12 339 1.16e-52 179
Msa0152150 MtrunA17_Chr1g0179801 34.441 331 202 8 36 353 26 354 1.31e-52 179
Msa0152150 MtrunA17_Chr5g0420901 31.454 337 215 8 37 365 12 340 3.65e-52 177
Msa0152150 MtrunA17_Chr7g0220001 36.949 295 170 8 73 359 41 327 4.49e-52 177
Msa0152150 MtrunA17_Chr6g0455481 34.472 322 192 10 47 359 18 329 5.31e-52 177
Msa0152150 MtrunA17_Chr5g0423221 30.994 342 215 9 36 366 36 367 1.00e-51 177
Msa0152150 MtrunA17_Chr7g0220011 35.404 322 194 9 47 362 15 328 1.06e-51 176
Msa0152150 MtrunA17_Chr7g0265351 35.762 302 179 7 69 363 35 328 2.68e-51 175
Msa0152150 MtrunA17_Chr8g0375571 31.792 346 208 10 36 365 10 343 7.96e-51 174
Msa0152150 MtrunA17_Chr5g0412651 35.032 314 187 8 73 375 38 345 8.95e-51 174
Msa0152150 MtrunA17_Chr8g0336831 37.555 229 134 3 28 251 19 243 9.74e-51 171
Msa0152150 MtrunA17_Chr5g0421011 32.840 338 211 9 36 365 12 341 1.02e-50 174
Msa0152150 MtrunA17_Chr1g0184161 32.622 328 205 8 43 362 10 329 1.24e-50 173
Msa0152150 MtrunA17_Chr5g0423201 31.672 341 212 9 36 365 12 342 2.49e-50 173
Msa0152150 MtrunA17_Chr8g0365241 31.138 334 219 7 36 363 22 350 2.95e-50 173
Msa0152150 MtrunA17_Chr5g0420981 31.454 337 215 8 36 363 17 346 5.90e-50 172
Msa0152150 MtrunA17_Chr5g0420941 31.378 341 212 9 36 365 10 339 7.14e-50 171
Msa0152150 MtrunA17_Chr5g0421091 30.178 338 219 8 37 365 11 340 1.27e-49 171
Msa0152150 MtrunA17_Chr1g0184151 32.000 325 211 8 43 362 10 329 2.34e-49 170
Msa0152150 MtrunA17_Chr5g0423211 31.195 343 210 9 37 365 13 343 2.59e-49 170
Msa0152150 MtrunA17_Chr1g0184101 34.056 323 198 8 43 357 9 324 6.93e-49 169
Msa0152150 MtrunA17_Chr8g0371931 32.931 331 197 11 46 362 14 333 8.20e-49 169
Msa0152150 MtrunA17_Chr3g0109041 31.965 341 211 9 37 363 10 343 1.04e-48 168
Msa0152150 MtrunA17_Chr8g0375671 33.660 306 185 8 72 365 51 350 4.79e-48 167
Msa0152150 MtrunA17_Chr5g0420951 31.268 339 223 7 33 365 14 348 5.63e-48 167
Msa0152150 MtrunA17_Chr2g0314381 29.341 334 218 9 42 365 48 373 4.36e-47 165
Msa0152150 MtrunA17_Chr8g0336801 47.682 151 76 2 218 366 1 150 7.18e-47 157
Msa0152150 MtrunA17_Chr8g0371921 32.628 331 198 10 46 362 14 333 1.01e-46 164
Msa0152150 MtrunA17_Chr2g0314391 30.294 340 219 9 36 365 35 366 1.35e-46 163
Msa0152150 MtrunA17_Chr3g0126741 33.333 339 200 12 35 356 21 350 1.46e-46 163
Msa0152150 MtrunA17_Chr5g0412681 33.770 305 183 8 73 369 33 326 1.20e-45 160
Msa0152150 MtrunA17_Chr7g0239111 29.970 337 227 8 36 367 19 351 1.26e-45 160
Msa0152150 MtrunA17_Chr5g0412671 33.546 313 193 7 73 375 38 345 1.66e-45 160
Msa0152150 MtrunA17_Chr4g0045441 33.442 308 174 7 73 354 26 328 1.90e-45 160
Msa0152150 MtrunA17_Chr7g0250511 30.086 349 230 9 29 370 6 347 2.32e-45 159
Msa0152150 MtrunA17_Chr4g0045451 32.039 309 179 7 73 355 26 329 2.53e-45 159
Msa0152150 MtrunA17_Chr7g0265221 30.226 354 216 9 32 360 21 368 5.54e-45 159
Msa0152150 MtrunA17_Chr7g0239101 30.921 304 196 6 72 367 54 351 2.36e-44 157
Msa0152150 MtrunA17_Chr1g0162351 33.535 331 184 11 52 354 51 373 2.37e-44 158
Msa0152150 MtrunA17_Chr5g0405411 31.046 306 196 8 61 355 25 326 3.02e-44 157
Msa0152150 MtrunA17_Chr5g0398291 31.085 341 216 8 37 360 8 346 3.53e-44 156
Msa0152150 MtrunA17_Chr8g0375601 29.942 344 217 10 37 365 11 345 1.34e-43 155
Msa0152150 MtrunA17_Chr8g0336871 42.857 175 91 3 194 366 1 168 2.41e-43 149
Msa0152150 MtrunA17_Chr7g0239821 29.268 328 217 9 48 367 40 360 3.57e-43 154
Msa0152150 MtrunA17_Chr3g0102041 30.699 329 206 8 52 362 9 333 4.44e-43 154
Msa0152150 MtrunA17_Chr8g0375701 30.659 349 226 9 27 365 6 348 6.15e-43 153
Msa0152150 MtrunA17_Chr1g0162361 33.626 342 190 10 48 363 4 334 1.40e-42 152
Msa0152150 MtrunA17_Chr1g0162321 32.931 331 186 11 52 354 51 373 5.01e-42 152
Msa0152150 MtrunA17_Chr4g0045471 30.952 336 187 11 52 355 8 330 6.79e-42 150
Msa0152150 MtrunA17_Chr2g0314401 29.118 340 223 8 36 365 16 347 2.40e-41 149
Msa0152150 MtrunA17_Chr4g0045431 32.899 307 175 8 73 353 26 327 4.32e-41 148
Msa0152150 MtrunA17_Chr5g0426891 31.457 302 193 7 73 365 39 335 6.67e-41 147
Msa0152150 MtrunA17_Chr4g0045411 33.537 328 185 10 50 354 10 327 7.26e-41 147
Msa0152150 MtrunA17_Chr7g0239121 28.875 329 218 10 48 367 27 348 2.52e-40 146
Msa0152150 MtrunA17_Chr6g0474391 29.762 336 203 9 48 361 43 367 2.09e-39 144
Msa0152150 MtrunA17_Chr2g0296371 28.824 340 220 8 37 363 17 347 7.19e-39 142
Msa0152150 MtrunA17_Chr1g0191201 32.099 324 195 10 46 353 31 345 7.23e-39 143
Msa0152150 MtrunA17_Chr2g0289341 30.508 295 185 8 73 357 4 288 1.29e-38 140
Msa0152150 MtrunA17_Chr8g0370711 32.759 290 185 7 62 345 44 329 1.47e-38 141
Msa0152150 MtrunA17_Chr1g0162191 30.844 308 195 9 69 365 43 343 1.84e-38 141
Msa0152150 MtrunA17_Chr8g0375681 32.584 267 172 5 104 365 15 278 3.14e-38 139
Msa0152150 MtrunA17_Chr5g0439011 31.293 294 178 10 73 353 5 287 1.03e-37 138
Msa0152150 MtrunA17_Chr1g0204181 30.060 336 202 11 48 361 38 362 1.07e-37 140
Msa0152150 MtrunA17_Chr2g0319491 30.247 324 206 6 45 363 8 316 1.72e-37 138
Msa0152150 MtrunA17_Chr3g0121141 31.164 292 183 10 73 356 4 285 1.87e-37 137
Msa0152150 MtrunA17_Chr2g0332191 30.341 323 201 10 73 380 52 365 2.06e-37 139
Msa0152150 MtrunA17_Chr5g0420721 33.333 249 148 8 127 365 3 243 5.10e-37 135
Msa0152150 MtrunA17_Chr8g0351101 29.459 370 219 11 13 360 6 355 5.74e-37 137
Msa0152150 MtrunA17_Chr3g0145171 31.673 281 181 7 73 345 52 329 5.25e-36 135
Msa0152150 MtrunA17_Chr4g0045461 31.494 308 179 6 73 354 26 327 1.38e-35 134
Msa0152150 MtrunA17_Chr7g0239071 28.723 282 187 6 92 365 19 294 5.33e-35 131
Msa0152150 MtrunA17_Chr3g0130391 31.657 338 196 12 47 361 44 369 5.82e-35 132
Msa0152150 MtrunA17_Chr5g0424201 30.745 322 195 9 47 353 19 327 6.03e-35 131
Msa0152150 MtrunA17_Chr3g0114861 31.722 331 210 9 37 359 6 328 5.47e-34 129
Msa0152150 MtrunA17_Chr3g0125201 29.904 311 178 12 73 361 3 295 5.54e-34 128
Msa0152150 MtrunA17_Chr8g0370721 29.836 305 198 9 62 358 44 340 1.68e-33 128
Msa0152150 MtrunA17_Chr3g0145181 29.431 299 194 9 59 345 36 329 1.85e-33 128
Msa0152150 MtrunA17_Chr8g0336791 36.313 179 105 3 28 201 19 193 2.64e-33 123
Msa0152150 MtrunA17_Chr5g0424211 30.592 304 197 7 47 341 17 315 2.92e-33 127
Msa0152150 MtrunA17_Chr4g0064781 31.802 283 176 8 73 346 50 324 3.94e-33 127
Msa0152150 MtrunA17_Chr7g0239091 27.451 306 205 7 72 371 159 453 6.60e-33 128
Msa0152150 MtrunA17_Chr7g0232161 30.142 282 172 6 36 303 24 294 9.24e-33 125
Msa0152150 MtrunA17_Chr4g0050031 28.863 343 228 12 35 365 21 359 1.07e-32 126
Msa0152150 MtrunA17_Chr8g0364161 37.805 164 97 3 21 181 17 178 1.13e-32 121
Msa0152150 MtrunA17_Chr3g0092531 32.215 298 174 10 70 352 3 287 1.51e-32 124
Msa0152150 MtrunA17_Chr3g0125421 30.240 334 201 10 48 360 16 338 3.28e-32 124
Msa0152150 MtrunA17_Chr3g0126761 38.342 193 112 5 181 371 42 229 4.20e-32 121
Msa0152150 MtrunA17_Chr3g0145201 28.920 287 192 7 69 345 680 964 4.03e-31 125
Msa0152150 MtrunA17_Chr3g0087031 26.073 303 204 10 73 364 60 353 1.07e-30 120
Msa0152150 MtrunA17_Chr8g0364171 46.364 110 59 0 182 291 17 126 3.58e-30 113
Msa0152150 MtrunA17_Chr1g0168001 37.278 169 98 4 22 183 5 172 3.75e-30 114
Msa0152150 MtrunA17_Chr5g0420881 37.681 138 83 3 229 365 2 137 9.21e-30 112
Msa0152150 MtrunA17_Chr4g0037611 38.509 161 90 3 193 352 1 153 2.25e-29 112
Msa0152150 MtrunA17_Chr7g0235991 38.462 143 85 1 73 212 21 163 3.49e-29 112
Msa0152150 MtrunA17_Chr5g0394071 38.323 167 95 2 186 352 5 163 2.41e-28 109
Msa0152150 MtrunA17_Chr2g0285931 27.523 327 193 11 55 361 20 322 3.25e-28 113
Msa0152150 MtrunA17_Chr8g0384461 26.023 342 223 8 32 353 6 337 3.72e-28 113
Msa0152150 MtrunA17_Chr4g0068891 28.866 291 187 8 73 352 20 301 5.12e-28 112
Msa0152150 MtrunA17_Chr1g0167921 44.828 116 64 0 186 301 52 167 6.81e-28 108
Msa0152150 MtrunA17_Chr7g0233661 46.721 122 57 2 231 352 24 137 1.55e-27 106
Msa0152150 MtrunA17_Chr8g0384481 27.869 366 223 12 6 352 4 347 1.83e-27 112
Msa0152150 MtrunA17_Chr6g0488511 30.797 276 166 11 73 335 3 266 2.49e-26 107
Msa0152150 MtrunA17_Chr2g0314371 25.402 311 191 9 42 320 23 324 7.32e-26 106
Msa0152150 MtrunA17_Chr8g0358941 28.859 298 185 10 72 352 26 313 1.91e-25 105
Msa0152150 MtrunA17_Chr6g0486831 27.607 326 204 8 57 357 7 325 1.15e-24 103
Msa0152150 MtrunA17_Chr1g0194321 26.645 304 189 9 73 352 20 313 3.69e-24 102
Msa0152150 MtrunA17_Chr2g0313111 29.373 303 184 14 73 361 28 314 4.13e-24 101
Msa0152150 MtrunA17_Chr4g0052251 29.747 316 181 11 64 361 30 322 4.30e-24 101
Msa0152150 MtrunA17_Chr4g0075471 39.535 129 73 4 231 356 32 158 6.30e-24 97.1
Msa0152150 MtrunA17_Chr8g0389941 28.440 327 187 14 69 362 30 342 1.16e-23 100
Msa0152150 MtrunA17_Chr3g0105281 26.299 308 187 10 55 352 24 301 1.22e-23 100
Msa0152150 MtrunA17_Chr1g0148771 29.572 257 165 10 73 322 63 310 3.05e-23 99.8
Msa0152150 MtrunA17_Chr4g0055871 27.675 271 162 11 75 322 6 265 6.61e-23 98.2
Msa0152150 MtrunA17_Chr2g0311751 35.659 129 80 1 58 183 12 140 2.07e-22 93.2
Msa0152150 MtrunA17_Chr3g0114871 29.804 255 165 7 46 291 16 265 8.17e-22 94.4
Msa0152150 MtrunA17_Chr3g0092581 35.802 162 95 6 195 352 3 159 9.77e-22 91.7
Msa0152150 MtrunA17_Chr8g0348951 27.181 298 189 11 74 353 6 293 3.67e-21 93.2
Msa0152150 MtrunA17_Chr4g0055911 26.182 275 165 9 73 322 9 270 4.57e-21 93.2
Msa0152150 MtrunA17_Chr1g0170631 30.542 203 134 5 181 381 1 198 5.94e-21 90.1
Msa0152150 MtrunA17_Chr7g0247741 28.315 279 171 8 69 331 7 272 2.46e-20 90.9
Msa0152150 MtrunA17_Chr1g0158011 27.459 244 166 6 112 351 4 240 3.63e-19 86.7
Msa0152150 MtrunA17_Chr4g0064771 32.584 178 111 5 171 346 19 189 4.76e-18 82.0
Msa0152150 MtrunA17_Chr5g0407731 26.502 283 195 9 73 352 33 305 8.03e-18 84.0
Msa0152150 MtrunA17_Chr1g0158021 28.444 225 143 8 69 283 45 261 9.69e-18 82.4
Msa0152150 MtrunA17_Chr2g0311611 50.000 70 28 1 229 291 2 71 1.09e-17 77.0
Msa0152150 MtrunA17_Chr5g0407781 27.397 292 181 12 73 352 5 277 7.86e-17 80.5
Msa0152150 MtrunA17_Chr2g0293931 29.379 177 114 5 186 352 10 185 2.74e-16 77.0
Msa0152150 MtrunA17_Chr8g0336841 46.154 78 39 2 291 366 9 85 8.07e-16 72.4
Msa0152150 MtrunA17_Chr2g0311641 31.852 135 85 4 35 166 20 150 1.21e-15 74.3
Msa0152150 MtrunA17_Chr4g0004071 24.585 301 207 10 72 360 8 300 3.98e-15 75.5
Msa0152150 MtrunA17_Chr4g0004061 23.667 300 218 7 69 360 5 301 4.41e-15 75.5
Msa0152150 MtrunA17_Chr2g0319521 33.028 109 73 0 183 291 16 124 7.43e-15 71.2
Msa0152150 MtrunA17_Chr8g0375581 41.573 89 45 3 204 288 1 86 1.14e-14 68.9
Msa0152150 MtrunA17_Chr5g0420891 31.884 138 85 4 37 171 12 143 4.63e-14 69.7
Msa0152150 MtrunA17_Chr2g0311621 32.479 117 74 3 18 132 2 115 8.12e-14 67.8
Msa0152150 MtrunA17_Chr7g0219991 42.045 88 49 2 200 286 265 351 2.14e-12 67.8
Msa0152150 MtrunA17_Chr7g0219991 29.600 125 85 2 47 170 15 137 1.64e-11 65.1
Msa0152150 MtrunA17_Chr4g0053251 46.914 81 40 3 241 319 199 278 3.90e-12 66.6
Msa0152150 MtrunA17_Chr1g0158031 29.310 174 101 7 204 370 12 170 3.61e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0152150 AT1G03410.2 46.512 344 173 5 22 356 5 346 1.55e-106 318
Msa0152150 AT1G03410.1 46.512 344 173 5 22 356 42 383 3.58e-106 318
Msa0152150 AT1G06650.2 44.722 360 187 5 19 368 8 365 6.63e-106 317
Msa0152150 AT1G06620.1 44.972 358 178 6 22 368 12 361 1.50e-105 316
Msa0152150 AT2G30840.1 43.020 351 194 2 21 365 5 355 2.72e-104 312
Msa0152150 AT1G03400.1 45.640 344 180 2 22 363 5 343 9.62e-104 311
Msa0152150 AT1G04350.1 43.103 348 195 2 21 365 6 353 1.22e-103 311
Msa0152150 AT5G59530.1 45.326 353 182 6 21 365 8 357 1.27e-102 308
Msa0152150 AT1G06640.1 43.836 365 193 5 14 368 3 365 5.45e-101 304
Msa0152150 AT2G30840.3 43.020 351 188 3 21 365 5 349 5.54e-100 301
Msa0152150 AT2G30830.1 41.714 350 196 3 21 365 5 351 3.10e-99 300
Msa0152150 AT5G59540.1 41.341 358 202 5 15 365 3 359 3.92e-99 300
Msa0152150 AT1G03400.2 42.204 372 180 3 22 363 5 371 1.44e-97 296
Msa0152150 AT3G61400.1 41.573 356 195 5 22 365 10 364 3.95e-97 295
Msa0152150 AT1G06645.1 42.382 361 193 5 18 368 20 375 1.09e-93 286
Msa0152150 AT2G25450.1 40.793 353 196 5 21 365 5 352 1.07e-89 275
Msa0152150 AT1G04380.1 40.994 322 180 4 48 365 23 338 2.05e-89 274
Msa0152150 AT5G43440.1 40.456 351 199 7 23 365 10 358 1.13e-87 270
Msa0152150 AT5G43450.1 39.944 358 204 6 15 365 2 355 5.15e-85 263
Msa0152150 AT1G06620.2 47.080 274 137 3 22 290 12 282 8.67e-85 260
Msa0152150 AT2G30840.2 45.091 275 146 1 21 290 5 279 1.72e-83 257
Msa0152150 AT1G06650.1 45.552 281 143 4 19 291 8 286 4.22e-82 254
Msa0152150 AT1G06640.2 44.746 295 153 4 14 300 3 295 3.87e-81 252
Msa0152150 AT1G06640.3 45.105 286 147 4 14 291 3 286 8.57e-80 247
Msa0152150 AT5G59540.2 40.426 282 163 3 15 291 3 284 1.23e-75 236
Msa0152150 AT3G61400.2 41.667 288 154 5 14 291 5 288 2.79e-74 233
Msa0152150 AT3G13610.1 38.953 344 196 9 27 363 16 352 5.27e-71 227
Msa0152150 AT1G55290.1 39.701 335 190 10 35 363 24 352 1.76e-68 221
Msa0152150 AT5G43450.2 41.219 279 160 3 15 290 2 279 6.55e-68 217
Msa0152150 AT1G04380.2 40.244 246 144 1 48 293 23 265 1.01e-67 216
Msa0152150 AT5G43440.2 40.876 274 155 5 23 290 10 282 1.54e-67 216
Msa0152150 AT3G12900.1 37.209 344 185 12 35 363 20 347 1.27e-60 200
Msa0152150 AT4G10490.1 35.135 333 203 7 41 365 11 338 1.18e-58 194
Msa0152150 AT5G24530.1 35.542 332 199 8 40 362 5 330 1.23e-58 194
Msa0152150 AT2G38240.1 34.743 331 204 7 37 359 12 338 3.85e-58 193
Msa0152150 AT3G11180.1 36.637 333 192 9 37 357 56 381 4.33e-57 192
Msa0152150 AT3G11180.2 36.637 333 192 9 37 357 56 381 4.47e-57 192
Msa0152150 AT3G55970.1 33.705 359 218 10 28 371 5 358 1.19e-56 190
Msa0152150 AT4G10500.1 34.756 328 196 7 48 365 20 339 3.89e-56 188
Msa0152150 AT5G05600.1 34.251 327 200 8 37 352 27 349 7.48e-53 180
Msa0152150 AT2G36690.2 31.845 336 218 6 34 360 18 351 1.57e-52 179
Msa0152150 AT2G36690.1 31.845 336 218 6 34 360 18 351 1.57e-52 179
Msa0152150 AT1G17010.1 30.448 335 216 8 42 365 23 351 1.20e-49 171
Msa0152150 AT4G25300.1 31.024 332 211 10 45 365 25 349 1.94e-49 171
Msa0152150 AT5G12270.1 33.141 347 216 11 27 363 10 350 1.55e-48 169
Msa0152150 AT3G51240.1 33.667 300 186 7 72 362 37 332 1.14e-47 166
Msa0152150 AT3G19000.1 35.952 331 174 11 52 353 8 329 1.69e-46 163
Msa0152150 AT1G78550.1 28.657 335 220 9 42 365 23 349 1.78e-46 163
Msa0152150 AT1G17020.1 30.655 336 214 9 42 365 23 351 1.76e-45 160
Msa0152150 AT3G60290.1 31.098 328 217 7 40 361 19 343 9.72e-44 155
Msa0152150 AT4G25310.1 31.469 286 178 8 89 365 70 346 1.32e-43 155
Msa0152150 AT4G25420.1 30.448 335 211 8 48 368 40 366 2.07e-43 155
Msa0152150 AT5G08640.2 32.787 305 176 9 71 359 41 332 1.89e-42 152
Msa0152150 AT5G08640.1 32.787 305 176 9 71 359 41 332 1.89e-42 152
Msa0152150 AT4G16330.2 33.445 299 181 7 73 363 67 355 3.97e-42 152
Msa0152150 AT4G22880.1 31.977 344 210 11 37 360 7 346 1.72e-41 150
Msa0152150 AT4G22880.2 31.977 344 210 11 37 360 7 346 1.72e-41 150
Msa0152150 AT4G22880.3 31.977 344 210 11 37 360 7 346 1.72e-41 150
Msa0152150 AT1G05010.1 32.601 273 164 8 73 335 4 266 1.80e-41 149
Msa0152150 AT1G78550.2 29.197 274 178 7 101 365 5 271 4.75e-40 144
Msa0152150 AT3G19010.1 33.230 322 188 10 52 352 8 323 5.32e-40 145
Msa0152150 AT3G19010.4 33.230 322 188 10 52 352 8 323 5.32e-40 145
Msa0152150 AT3G21420.1 32.673 303 190 7 72 363 54 353 1.48e-39 145
Msa0152150 AT2G44800.1 27.964 329 230 5 30 353 9 335 1.56e-39 144
Msa0152150 AT3G55970.2 31.900 279 174 8 28 291 5 282 3.92e-39 142
Msa0152150 AT5G07200.1 30.220 364 220 11 40 381 29 380 4.54e-39 144
Msa0152150 AT3G51240.2 35.965 228 137 5 141 362 24 248 8.94e-38 137
Msa0152150 AT5G05600.2 31.955 266 168 6 37 291 27 290 2.71e-37 137
Msa0152150 AT5G20400.1 30.218 321 209 9 48 358 19 334 9.68e-37 137
Msa0152150 AT1G15550.1 31.849 292 178 10 73 353 57 338 2.67e-36 136
Msa0152150 AT4G21200.1 31.488 289 174 10 72 352 41 313 7.43e-36 134
Msa0152150 AT3G19000.2 35.472 265 143 9 52 291 8 269 1.68e-35 132
Msa0152150 AT5G51810.1 28.571 343 225 7 48 379 42 375 1.75e-35 134
Msa0152150 AT3G19010.3 32.468 308 179 13 52 352 8 293 7.02e-35 131
Msa0152150 AT5G07480.1 28.440 327 213 9 48 361 24 342 2.21e-34 130
Msa0152150 AT5G63590.1 30.065 306 189 8 61 349 2 299 6.10e-34 128
Msa0152150 AT1G12010.1 29.831 295 184 10 72 356 6 287 1.17e-33 128
Msa0152150 AT1G62380.1 28.814 295 187 9 72 356 6 287 1.52e-33 127
Msa0152150 AT4G25300.2 36.872 179 109 4 189 365 79 255 2.09e-33 125
Msa0152150 AT1G60980.1 28.125 352 224 9 48 381 36 376 3.35e-33 128
Msa0152150 AT4G16330.1 34.615 208 126 4 160 363 48 249 5.75e-33 124
Msa0152150 AT1G80330.1 29.299 314 196 9 67 363 43 347 1.54e-32 125
Msa0152150 AT5G20550.1 30.547 311 198 11 48 345 19 324 2.11e-32 125
Msa0152150 AT4G25420.2 29.457 258 163 5 48 291 40 292 5.47e-32 123
Msa0152150 AT1G77330.1 31.104 299 179 12 73 356 3 289 9.76e-32 122
Msa0152150 AT5G63600.1 28.475 295 192 7 69 355 29 312 1.20e-31 122
Msa0152150 AT5G63600.2 28.716 296 191 8 69 355 29 313 9.10e-31 120
Msa0152150 AT4G25310.2 28.070 285 161 8 89 365 70 318 1.47e-30 119
Msa0152150 AT1G78440.1 30.380 316 187 11 64 361 11 311 2.50e-30 119
Msa0152150 AT1G50960.1 28.671 286 189 6 72 352 39 314 1.04e-29 117
Msa0152150 AT2G19590.1 30.986 284 171 11 72 345 10 278 1.09e-28 114
Msa0152150 AT1G44090.1 29.326 341 218 11 23 348 18 350 1.13e-28 115
Msa0152150 AT1G49390.1 27.864 323 217 10 37 348 9 326 2.07e-28 114
Msa0152150 AT1G80340.1 26.959 319 212 9 45 353 24 331 2.87e-28 114
Msa0152150 AT4G21690.1 30.252 357 191 18 20 353 12 333 1.41e-27 112
Msa0152150 AT5G51810.2 28.682 258 167 4 48 294 42 293 1.68e-27 110
Msa0152150 AT5G54000.2 30.038 263 175 6 89 345 65 324 1.81e-27 112
Msa0152150 AT1G47990.1 30.341 323 170 14 72 364 14 311 1.84e-27 111
Msa0152150 AT1G30040.1 26.885 305 202 8 71 361 24 321 2.95e-27 111
Msa0152150 AT3G19010.2 32.061 262 153 9 52 292 8 265 6.75e-27 109
Msa0152150 AT2G34555.1 27.907 301 194 9 73 361 27 316 8.30e-25 104
Msa0152150 AT1G02400.1 27.052 329 210 12 53 362 2 319 3.71e-24 102
Msa0152150 AT2G19590.2 31.225 253 150 10 102 345 26 263 1.71e-23 99.8
Msa0152150 AT5G43935.1 27.090 299 184 8 72 361 18 291 2.82e-23 99.0
Msa0152150 AT5G54000.1 28.745 247 167 6 105 345 1 244 6.33e-23 97.4
Msa0152150 AT5G63595.1 27.692 260 158 6 69 322 21 256 7.91e-23 97.4
Msa0152150 AT4G23340.1 27.798 277 168 9 95 353 30 292 2.58e-22 97.1
Msa0152150 AT1G49390.2 27.490 251 171 7 105 348 1 247 2.26e-21 93.2
Msa0152150 AT3G46500.5 27.362 307 193 9 73 358 17 314 3.20e-21 94.0
Msa0152150 AT3G47190.1 25.000 300 183 8 72 352 31 307 1.70e-20 92.0
Msa0152150 AT1G35190.2 28.523 298 183 9 75 359 14 294 2.84e-20 90.9
Msa0152150 AT3G49620.1 28.808 302 171 9 88 356 60 350 6.67e-20 90.5
Msa0152150 AT5G63580.2 29.204 226 149 5 73 291 19 240 8.16e-20 88.2
Msa0152150 AT5G07480.2 31.771 192 121 6 177 361 45 233 9.13e-20 88.2
Msa0152150 AT5G63580.1 30.043 233 149 7 73 298 19 244 9.93e-20 88.2
Msa0152150 AT1G14120.2 28.873 284 175 11 73 345 8 275 9.77e-19 86.7
Msa0152150 AT1G14120.1 28.873 284 175 11 73 345 8 275 9.77e-19 86.7
Msa0152150 AT1G14120.3 28.873 284 175 11 73 345 8 275 9.77e-19 86.7
Msa0152150 AT4G23340.2 37.815 119 71 3 236 353 58 174 9.92e-19 84.3
Msa0152150 AT3G49630.1 28.571 294 166 9 73 332 9 292 2.52e-18 85.9
Msa0152150 AT3G50210.4 29.474 285 167 9 66 319 3 284 2.99e-18 85.5
Msa0152150 AT3G50210.1 29.474 285 167 9 66 319 3 284 2.99e-18 85.5
Msa0152150 AT3G50210.3 29.474 285 167 9 66 319 3 284 2.99e-18 85.5
Msa0152150 AT3G49630.3 29.259 270 158 8 86 332 29 288 4.65e-18 84.7
Msa0152150 AT1G35190.1 27.010 311 194 8 75 359 14 317 4.65e-18 84.7
Msa0152150 AT1G14130.1 27.922 308 196 10 73 369 9 301 8.26e-18 84.0
Msa0152150 AT3G46490.1 26.129 310 200 9 73 358 17 321 1.39e-17 83.6
Msa0152150 AT5G58660.1 25.000 316 176 10 73 352 34 324 5.86e-17 82.0
Msa0152150 AT3G46500.7 27.306 271 168 8 73 322 17 279 6.13e-17 81.3
Msa0152150 AT3G46490.2 25.753 299 189 9 73 345 17 308 1.99e-16 79.7
Msa0152150 AT1G30040.2 25.106 235 157 6 71 291 24 253 1.73e-14 73.6
Msa0152150 AT1G52820.1 25.413 303 202 10 64 357 13 300 3.33e-14 73.6
Msa0152150 AT4G16765.3 31.638 177 109 5 183 350 60 233 9.88e-14 70.9
Msa0152150 AT4G16765.6 32.886 149 89 4 183 322 60 206 1.11e-13 70.9
Msa0152150 AT4G16765.1 32.886 149 89 4 183 322 60 206 1.11e-13 70.9
Msa0152150 AT4G16765.2 32.886 149 89 4 183 322 60 206 1.11e-13 70.9
Msa0152150 AT4G22870.1 35.294 102 64 2 260 360 2 102 8.61e-13 65.1
Msa0152150 AT3G46500.4 32.787 122 74 3 242 358 60 178 5.00e-12 64.7
Msa0152150 AT3G50210.2 44.186 86 45 3 236 319 118 202 6.44e-12 65.9
Msa0152150 AT4G16770.1 28.708 209 130 5 72 265 21 225 9.47e-12 65.5
Msa0152150 AT3G46500.10 32.787 122 74 3 242 358 122 240 1.50e-11 64.7
Msa0152150 AT3G46500.1 32.787 122 74 3 242 358 122 240 1.50e-11 64.7
Msa0152150 AT4G22870.2 30.370 135 79 5 233 360 17 143 9.52e-11 60.5

Find 140 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAACAAAATCCGGCGTAAA+AGG 0.209794 1_4:-14696920 Msa0152150:CDS
AGGTCGATGGTGGGAATTTC+CGG 0.216319 1_4:+14696803 None:intergenic
GTTATGAATTAAATGAATAA+TGG 0.237601 1_4:+14697037 None:intergenic
AATGTTTGTGTGTGGGGTTT+GGG 0.242648 1_4:+14697061 None:intergenic
GAATGTTTGTGTGTGGGGTT+TGG 0.243159 1_4:+14697060 None:intergenic
GAATTGATGCGAAACGTTAT+TGG 0.254822 1_4:-14696680 Msa0152150:CDS
CAACATTGGAGATTTATTTC+AGG 0.268048 1_4:-14695085 Msa0152150:intron
AGCGGCACGGGAATGGTTTA+TGG 0.269928 1_4:+14696775 None:intergenic
ATAACGTTTCGCATCAATTC+CGG 0.288758 1_4:+14696683 None:intergenic
TCTCCCTATTACCCGGGTTT+AGG 0.289476 1_4:+14694704 None:intergenic
GGATCATATTGGTGGCTTAC+AGG 0.300374 1_4:-14695163 Msa0152150:CDS
GTGAGGTCAGATAGAGTTTC+GGG 0.306381 1_4:+14696848 None:intergenic
TTATGAATTAAATGAATAAT+GGG 0.324326 1_4:+14697038 None:intergenic
AGATTAGGCTGAGGGCAAAA+TGG 0.338207 1_4:+14695240 None:intergenic
CTCAATTCTCATGCAGATCC+TGG 0.339245 1_4:-14695207 Msa0152150:CDS
CAGCTGGCGTGACACGCTTC+AGG 0.347179 1_4:-14696540 Msa0152150:intron
TGAAGAAAGGCTCACAGAAT+TGG 0.350493 1_4:-14695301 Msa0152150:CDS
AATCAATTCCTATCATCTTA+TGG 0.356953 1_4:-14694149 Msa0152150:CDS
ATCATAGGATTCATCAATAA+TGG 0.359101 1_4:+14694184 None:intergenic
GAGACCCGTGGCTCGTTAGA+AGG 0.359180 1_4:+14694739 None:intergenic
GGAATCTCCTTCTCTTCCGC+TGG 0.367358 1_4:+14695420 None:intergenic
GACATTAATCCAACCATGTT+GGG 0.368631 1_4:+14695134 None:intergenic
ACGGTGGTTGGTGGTGGTGA+AGG 0.371074 1_4:+14696989 None:intergenic
CCAAATACTTCAGGAAGTTC+TGG 0.372114 1_4:-14694209 Msa0152150:intron
CGGTGGTTGGTGGTGGTGAA+GGG 0.372563 1_4:+14696990 None:intergenic
GGCATTGACAGTATTGTTGC+AGG 0.379466 1_4:-14695184 Msa0152150:CDS
CAAGCCTCTTGATGGAGCTT+TGG 0.380373 1_4:-14695112 Msa0152150:CDS
ATTAATGTCAAGCCTCTTGA+TGG 0.388054 1_4:-14695120 Msa0152150:CDS
CGTTCCGCTGCAAGTACGTT+TGG 0.389362 1_4:-14696737 Msa0152150:CDS
GAAGAAAGGCTCACAGAATT+GGG 0.402379 1_4:-14695300 Msa0152150:CDS
ATATTGGTGGCTTACAGGTT+AGG 0.411623 1_4:-14695158 Msa0152150:CDS
GGTGGTGAAGGGGTGGCGAT+TGG 0.413351 1_4:+14697001 None:intergenic
GGTAATAGGGAGAAGCTCTT+TGG 0.421313 1_4:-14694694 Msa0152150:CDS
TTTCCTAAACCCGGGTAATA+GGG 0.421959 1_4:-14694707 Msa0152150:CDS
GGTGGTTGGTGGTGGTGAAG+GGG 0.423936 1_4:+14696991 None:intergenic
TCCTTCTCTTCCGCTGGGAC+AGG 0.425236 1_4:+14695426 None:intergenic
AGGAGATTCCGGAGGTATGC+AGG 0.432250 1_4:-14695407 Msa0152150:CDS
TTCTTTAAGAAAGAGCTTGA+TGG 0.440915 1_4:-14694595 Msa0152150:intron
CTGAAGCGTGTCACGCCAGC+TGG 0.442761 1_4:+14696541 None:intergenic
GGTTGGTGGTGGTGAAGGGG+TGG 0.443343 1_4:+14696994 None:intergenic
AGCGGAAGAGAAGGAGATTC+CGG 0.446303 1_4:-14695418 Msa0152150:CDS
AGTGAGGTCAGATAGAGTTT+CGG 0.456213 1_4:+14696847 None:intergenic
TACCGTAGGGAGATGGGAAC+TGG 0.456266 1_4:-14696608 Msa0152150:CDS
AATGGGAATGTTTGTGTGTG+GGG 0.464544 1_4:+14697055 None:intergenic
TTCTCTGCTGATGTTAGCTC+TGG 0.467059 1_4:+14694664 None:intergenic
TGTTTCGTCGAAGTCTTTCA+CGG 0.467972 1_4:+14696937 None:intergenic
ACCTTCTTCCTCTCGTCCGC+AGG 0.470158 1_4:+14696632 None:intergenic
TTACTGGGCTTGTTGAGTGA+AGG 0.471495 1_4:-14695336 Msa0152150:CDS
GGTGATGAGACGGTGGTTGG+TGG 0.471586 1_4:+14696980 None:intergenic
TCGCTTCTAAAGCTGCCAGC+TGG 0.472617 1_4:-14696556 Msa0152150:CDS
CAGATAGAGTTTCGGGTGGA+TGG 0.477759 1_4:+14696855 None:intergenic
GATGAGACGGTGGTTGGTGG+TGG 0.480200 1_4:+14696983 None:intergenic
GAAGGTGTACCGTAGGGAGA+TGG 0.481378 1_4:-14696615 Msa0152150:CDS
GATTAGGCTGAGGGCAAAAT+GGG 0.486909 1_4:+14695241 None:intergenic
TCAATTCCGGCGCGACTCCA+TGG 0.487105 1_4:+14696696 None:intergenic
TTCCTATCATCTTATGGTAT+CGG 0.487153 1_4:-14694143 Msa0152150:CDS
TCAATTCTCATGCAGATCCT+GGG 0.490704 1_4:-14695206 Msa0152150:CDS
CCGTGGCTCGTTAGAAGGAT+TGG 0.491190 1_4:+14694744 None:intergenic
ACCTCCTTCCTGCATACCTC+CGG 0.492923 1_4:+14695399 None:intergenic
ACGATCAGATTTCTCCCAAC+CGG 0.493561 1_4:-14696822 Msa0152150:CDS
ACCTGTCCCAGCGGAAGAGA+AGG 0.494521 1_4:-14695427 Msa0152150:CDS
CTGATCAACGACAGCGGCAC+GGG 0.496866 1_4:+14696763 None:intergenic
GGAGCTTTGGTTATCAACAT+TGG 0.499778 1_4:-14695099 Msa0152150:CDS
GTATTGTTGCAGGATCATAT+TGG 0.500449 1_4:-14695174 Msa0152150:CDS
AACCGATACCATAAGATGAT+AGG 0.505203 1_4:+14694141 None:intergenic
TACTGGGCTTGTTGAGTGAA+GGG 0.509108 1_4:-14695335 Msa0152150:CDS
GAGGGCAAAATGGGTAATAG+TGG 0.511066 1_4:+14695250 None:intergenic
CAGAATTGGGTTTGTCGCAA+GGG 0.514313 1_4:-14695287 Msa0152150:CDS
AGAGGAAGAAGGTGTACCGT+AGG 0.520273 1_4:-14696622 Msa0152150:CDS
ACAGAATTGGGTTTGTCGCA+AGG 0.525999 1_4:-14695288 Msa0152150:CDS
TGACATTAATCCAACCATGT+TGG 0.533450 1_4:+14695133 None:intergenic
AGGTTAGGTCCCAACATGGT+TGG 0.535641 1_4:-14695143 Msa0152150:CDS
GATGGTGGGAATTTCCGGTT+GGG 0.536705 1_4:+14696808 None:intergenic
AAGAGCTTCTCCCTATTACC+CGG 0.538989 1_4:+14694697 None:intergenic
GAATCTCCTTCTCTTCCGCT+GGG 0.540070 1_4:+14695421 None:intergenic
CGATGGTGGGAATTTCCGGT+TGG 0.542611 1_4:+14696807 None:intergenic
AATCAATCAATTTCACATTG+TGG 0.543402 1_4:-14697159 Msa0152150:five_prime_UTR
AAGGTGTACCGTAGGGAGAT+GGG 0.544203 1_4:-14696614 Msa0152150:CDS
GGCTTGTTGAGTGAAGGGTT+AGG 0.547699 1_4:-14695330 Msa0152150:CDS
CGCTCAACGAATTTATGACA+AGG 0.549583 1_4:-14694618 Msa0152150:CDS
TTTGTCGCAAGGGAGGGTGA+TGG 0.551800 1_4:-14695277 Msa0152150:CDS
CAACGACAGCGGCACGGGAA+TGG 0.552804 1_4:+14696768 None:intergenic
GACTTCGACGAAACAAAATC+CGG 0.555299 1_4:-14696929 Msa0152150:CDS
GTGAAATCTCTATAAAGAGC+TGG 0.556464 1_4:+14694640 None:intergenic
TTGTTGCAGGATCATATTGG+TGG 0.559461 1_4:-14695171 Msa0152150:CDS
TAATGGGAATGTTTGTGTGT+GGG 0.561263 1_4:+14697054 None:intergenic
AATTGGGTTTGTCGCAAGGG+AGG 0.563814 1_4:-14695284 Msa0152150:CDS
CCAATCCTTCTAACGAGCCA+CGG 0.564324 1_4:-14694744 Msa0152150:CDS
GGTATGCAGGAAGGAGGTCA+TGG 0.565254 1_4:-14695394 Msa0152150:CDS
CAATCCTTCTAACGAGCCAC+GGG 0.566309 1_4:-14694743 Msa0152150:CDS
TTGAGTCCAACGGTAAGATT+AGG 0.566485 1_4:+14695225 None:intergenic
GGTTAGGATTACGTGAAGAA+AGG 0.568337 1_4:-14695314 Msa0152150:CDS
ATTGGGTTTGTCGCAAGGGA+GGG 0.570147 1_4:-14695283 Msa0152150:CDS
GGTGGATGGATGAAGAATGA+TGG 0.573720 1_4:+14696869 None:intergenic
AACAATACTGTCAATGCCCC+AGG 0.574218 1_4:+14695189 None:intergenic
GGTGGTGATGAGACGGTGGT+TGG 0.574489 1_4:+14696977 None:intergenic
TTCTTTCAAGTGATCAACCA+TGG 0.576207 1_4:-14696713 Msa0152150:CDS
AGAGCTTCTCCCTATTACCC+GGG 0.579455 1_4:+14694698 None:intergenic
GCTGATGTTAGCTCTGGTAA+AGG 0.581133 1_4:+14694670 None:intergenic
CAGGAAGGAGGTCATGGAGT+GGG 0.584884 1_4:-14695388 Msa0152150:CDS
TCGCAAGGGAGGGTGATGGT+TGG 0.589053 1_4:-14695273 Msa0152150:CDS
GAGGAAGAAGGTGTACCGTA+GGG 0.589131 1_4:-14696621 Msa0152150:CDS
CACCAGTTCCCATCTCCCTA+CGG 0.596077 1_4:+14696606 None:intergenic
GCTGATCAACGACAGCGGCA+CGG 0.596266 1_4:+14696762 None:intergenic
ATGGATGAAGAATGATGGAA+TGG 0.596986 1_4:+14696874 None:intergenic
TATGGCTGAGAGGTCGATGG+TGG 0.597332 1_4:+14696793 None:intergenic
ATAACCAAAGCTCCATCAAG+AGG 0.600908 1_4:+14695108 None:intergenic
CCTCAGCCTAATCTTACCGT+TGG 0.602504 1_4:-14695231 Msa0152150:CDS
ATGAACAGCCTGCGGACGAG+AGG 0.602972 1_4:-14696640 Msa0152150:CDS
GGATAAAGAAGTGGTTCGTG+TGG 0.605239 1_4:-14695367 Msa0152150:CDS
GCCTGCGGACGAGAGGAAGA+AGG 0.605646 1_4:-14696633 Msa0152150:CDS
GTCTCAGATAATTTCGAACG+AGG 0.609437 1_4:-14694797 Msa0152150:intron
CAACGGTAAGATTAGGCTGA+GGG 0.624561 1_4:+14695232 None:intergenic
CAATTCTCATGCAGATCCTG+GGG 0.624564 1_4:-14695205 Msa0152150:CDS
CCAACGGTAAGATTAGGCTG+AGG 0.627839 1_4:+14695231 None:intergenic
GTCGTACGGTGGTGATGAGA+CGG 0.634248 1_4:+14696970 None:intergenic
GATCAACCATGGAGTCGCGC+CGG 0.634384 1_4:-14696702 Msa0152150:CDS
GATTCCGGAGGTATGCAGGA+AGG 0.635167 1_4:-14695403 Msa0152150:CDS
CATGGAGTGGGATAAAGAAG+TGG 0.636273 1_4:-14695376 Msa0152150:CDS
GATAAAGAAGTGGTTCGTGT+GGG 0.638210 1_4:-14695366 Msa0152150:CDS
AGAAATCTGATCGTGGAGTG+AGG 0.641872 1_4:+14696831 None:intergenic
GAATCCAAACGTACTTGCAG+CGG 0.644221 1_4:+14696733 None:intergenic
TCCGGAGGTATGCAGGAAGG+AGG 0.655340 1_4:-14695400 Msa0152150:CDS
ATGGCTGAGAGGTCGATGGT+GGG 0.657383 1_4:+14696794 None:intergenic
GTAAAAGGCCTAATAGACTC+CGG 0.658738 1_4:-14696905 Msa0152150:CDS
TTACAGGTTAGGTCCCAACA+TGG 0.668383 1_4:-14695147 Msa0152150:CDS
GAAGTTTCATGAACAGCCTG+CGG 0.668945 1_4:-14696648 Msa0152150:CDS
GTTTATGGCTGAGAGGTCGA+TGG 0.677985 1_4:+14696790 None:intergenic
AGGTCAGATAGAGTTTCGGG+TGG 0.683279 1_4:+14696851 None:intergenic
GGAAGAGAAGGAGATTCCGG+AGG 0.687285 1_4:-14695415 Msa0152150:CDS
GGGAATGGTTTATGGCTGAG+AGG 0.688908 1_4:+14696783 None:intergenic
GCAGGAAGGAGGTCATGGAG+TGG 0.690360 1_4:-14695389 Msa0152150:CDS
TAGAAGGATTGGCTAATACA+CGG 0.694993 1_4:+14694755 None:intergenic
ATAATGGGAATGTTTGTGTG+TGG 0.697766 1_4:+14697053 None:intergenic
GGTTGGGAGAAATCTGATCG+TGG 0.700282 1_4:+14696824 None:intergenic
AAAACAGCAATCGAGACCCG+TGG 0.709361 1_4:+14694727 None:intergenic
ACGAAGCTGATCAACGACAG+CGG 0.715398 1_4:+14696757 None:intergenic
TGCATGAGAATTGAGTCCAA+CGG 0.715845 1_4:+14695215 None:intergenic
TAAGATGGGACCTGTCCCAG+CGG 0.729083 1_4:-14695436 Msa0152150:CDS
GTACGGTGGTGATGAGACGG+TGG 0.734372 1_4:+14696973 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGAATTAAATGAATAAT+GGG + chr1_4:14694261-14694280 None:intergenic 10.0%
!! GTTATGAATTAAATGAATAA+TGG + chr1_4:14694262-14694281 None:intergenic 15.0%
!!! TTTTTTCAATTAAGATTACA+TGG - chr1_4:14694979-14694998 Msa0152150:intron 15.0%
!!! TTTTTCAATTAAGATTACAT+GGG - chr1_4:14694980-14694999 Msa0152150:intron 15.0%
!!! TCAGTTAGTTAATTATTTTT+TGG - chr1_4:14695402-14695421 Msa0152150:CDS 15.0%
!! TATGTATGTATGTATATATT+AGG - chr1_4:14696840-14696859 Msa0152150:CDS 15.0%
!! TGATAAATTTGTATATTATG+TGG + chr1_4:14696899-14696918 None:intergenic 15.0%
!! TAATTAGTTGCATTATAAAA+GGG - chr1_4:14697018-14697037 Msa0152150:exon 15.0%
!! TTGACAAAATTTGTATTGTT+CGG - chr1_4:14694883-14694902 Msa0152150:intron 20.0%
!! TGTAAATTATGAAATTCAGT+TGG - chr1_4:14695320-14695339 Msa0152150:CDS 20.0%
!!! AATTTAGTTTCTAAAATTGC+AGG - chr1_4:14695649-14695668 Msa0152150:intron 20.0%
!! TTATTCAAAAAGAAAAGACA+AGG + chr1_4:14696270-14696289 None:intergenic 20.0%
!!! GAAAATTTATTGTGTTTTGA+TGG - chr1_4:14696359-14696378 Msa0152150:intron 20.0%
!! TGAGAAATCCAAATTAAAAA+AGG + chr1_4:14696465-14696484 None:intergenic 20.0%
!!! ATTATCTGAGACAAAAATTA+TGG + chr1_4:14696491-14696510 None:intergenic 20.0%
!!! AATCTGGTAATTTTTAATGT+TGG - chr1_4:14696960-14696979 Msa0152150:CDS 20.0%
!! GTAATTAGTTGCATTATAAA+AGG - chr1_4:14697017-14697036 Msa0152150:exon 20.0%
!!! ATTTTGATTCACAATATCAT+AGG + chr1_4:14697130-14697149 None:intergenic 20.0%
! AATCAATCAATTTCACATTG+TGG - chr1_4:14694137-14694156 Msa0152150:CDS 25.0%
! ATAAGCTTGTGAAAAAATGA+CGG - chr1_4:14695051-14695070 Msa0152150:intron 25.0%
!! AGACATAATTTTGAGCTTAT+AGG + chr1_4:14695123-14695142 None:intergenic 25.0%
! AGTTGAAGTAAACTTGAAAA+AGG - chr1_4:14695208-14695227 Msa0152150:CDS 25.0%
!! AGTTAACAGAATTTTTCTCA+TGG + chr1_4:14695238-14695257 None:intergenic 25.0%
!! TACAATTTTCAGAACCAAAA+TGG - chr1_4:14695803-14695822 Msa0152150:intron 25.0%
!! ATAACGATGAAATACCATTT+TGG + chr1_4:14695820-14695839 None:intergenic 25.0%
!! GTATTTCATCGTTATTTCAA+TGG - chr1_4:14695825-14695844 Msa0152150:intron 25.0%
!! ATGTTCACATCAATTTTTCA+AGG - chr1_4:14696330-14696349 Msa0152150:intron 25.0%
!!! TTTGCTGTCCTTTTTTAATT+TGG - chr1_4:14696454-14696473 Msa0152150:intron 25.0%
! GTAATAGTAACTTTGTAAGA+TGG - chr1_4:14696796-14696815 Msa0152150:CDS 25.0%
!! TATGTGGTTTGTATATTATG+TGG + chr1_4:14696883-14696902 None:intergenic 25.0%
! AAATTACCAGATTAGTGTAA+CGG + chr1_4:14696953-14696972 None:intergenic 25.0%
! ATCATAGGATTCATCAATAA+TGG + chr1_4:14697115-14697134 None:intergenic 25.0%
! AATCAATTCCTATCATCTTA+TGG - chr1_4:14697147-14697166 Msa0152150:five_prime_UTR 25.0%
TTATAACAGATAGCTGATAG+CGG - chr1_4:14694851-14694870 Msa0152150:intron 30.0%
GTATTGTTCGGTAGAATTAA+TGG - chr1_4:14694895-14694914 Msa0152150:intron 30.0%
AAAAAATGACGGTTACCAAA+CGG - chr1_4:14695062-14695081 Msa0152150:intron 30.0%
TTGACTAAAAAAGATCCGTT+TGG + chr1_4:14695080-14695099 None:intergenic 30.0%
!! CATTCATGCTTTTTGTAGAA+AGG + chr1_4:14695264-14695283 None:intergenic 30.0%
GAAAAACATGAAGAGCTTAA+AGG + chr1_4:14695515-14695534 None:intergenic 30.0%
ATGTTACTCACACACTAAAT+AGG - chr1_4:14695570-14695589 Msa0152150:intron 30.0%
ATGAAAGACTGATCAAATTG+AGG + chr1_4:14695703-14695722 None:intergenic 30.0%
ATTAACATGATCAACCCAAT+GGG - chr1_4:14695736-14695755 Msa0152150:intron 30.0%
! TGGAATTTTGCAGATTAAGA+TGG - chr1_4:14695845-14695864 Msa0152150:intron 30.0%
! GGAATTTTGCAGATTAAGAT+GGG - chr1_4:14695846-14695865 Msa0152150:intron 30.0%
CAACATTGGAGATTTATTTC+AGG - chr1_4:14696211-14696230 Msa0152150:intron 30.0%
CACAATCACAAAACACTAAT+TGG + chr1_4:14696403-14696422 None:intergenic 30.0%
! TTCTTTAAGAAAGAGCTTGA+TGG - chr1_4:14696701-14696720 Msa0152150:CDS 30.0%
TTCCTATCATCTTATGGTAT+CGG - chr1_4:14697153-14697172 Msa0152150:five_prime_UTR 30.0%
!!! GGTTTGGGTTTTGATTTTGA+AGG + chr1_4:14694223-14694242 None:intergenic 35.0%
TAATGGGAATGTTTGTGTGT+GGG + chr1_4:14694245-14694264 None:intergenic 35.0%
! ATAATGGGAATGTTTGTGTG+TGG + chr1_4:14694246-14694265 None:intergenic 35.0%
!! TTTTGATTCCGGAGTCTATT+AGG + chr1_4:14694402-14694421 None:intergenic 35.0%
!!! TGATGGAATGGTTTTGATTC+CGG + chr1_4:14694413-14694432 None:intergenic 35.0%
! ATGGATGAAGAATGATGGAA+TGG + chr1_4:14694425-14694444 None:intergenic 35.0%
! TTCTTTCAAGTGATCAACCA+TGG - chr1_4:14694583-14694602 Msa0152150:intron 35.0%
ATAACGTTTCGCATCAATTC+CGG + chr1_4:14694616-14694635 None:intergenic 35.0%
GAATTGATGCGAAACGTTAT+TGG - chr1_4:14694616-14694635 Msa0152150:CDS 35.0%
GTTGAAAAACCAGCTTATAG+CGG - chr1_4:14694822-14694841 Msa0152150:intron 35.0%
TTGCAAGAATGAGTTTACGT+TGG - chr1_4:14695365-14695384 Msa0152150:CDS 35.0%
ATGATCAACGTATCAGAAGA+AGG + chr1_4:14695552-14695571 None:intergenic 35.0%
GATTAACATGATCAACCCAA+TGG - chr1_4:14695735-14695754 Msa0152150:intron 35.0%
GTATTGTTGCAGGATCATAT+TGG - chr1_4:14696122-14696141 Msa0152150:intron 35.0%
GACATTAATCCAACCATGTT+GGG + chr1_4:14696165-14696184 None:intergenic 35.0%
TGACATTAATCCAACCATGT+TGG + chr1_4:14696166-14696185 None:intergenic 35.0%
ATTAATGTCAAGCCTCTTGA+TGG - chr1_4:14696176-14696195 Msa0152150:intron 35.0%
!!! TGTGTTTTGATGGAAATCAC+AGG - chr1_4:14696369-14696388 Msa0152150:intron 35.0%
!!! GTGTTTTGATGGAAATCACA+GGG - chr1_4:14696370-14696389 Msa0152150:intron 35.0%
CTTGGCATTACGAAAAGAAA+AGG + chr1_4:14696431-14696450 None:intergenic 35.0%
AAAAAGGACAGCAAAATGCT+TGG + chr1_4:14696449-14696468 None:intergenic 35.0%
!! TAGAAGGATTGGCTAATACA+CGG + chr1_4:14696544-14696563 None:intergenic 35.0%
GTGAAATCTCTATAAAGAGC+TGG + chr1_4:14696659-14696678 None:intergenic 35.0%
GTGATGTATCTATAAAGCAG+CGG - chr1_4:14696751-14696770 Msa0152150:CDS 35.0%
! CAGAACTTCCTGAAGTATTT+GGG + chr1_4:14697089-14697108 None:intergenic 35.0%
AACCGATACCATAAGATGAT+AGG + chr1_4:14697158-14697177 None:intergenic 35.0%
AATGTTTGTGTGTGGGGTTT+GGG + chr1_4:14694238-14694257 None:intergenic 40.0%
AATGGGAATGTTTGTGTGTG+GGG + chr1_4:14694244-14694263 None:intergenic 40.0%
! AGTCTTTCACGGCTTTTACA+CGG + chr1_4:14694351-14694370 None:intergenic 40.0%
TGTTTCGTCGAAGTCTTTCA+CGG + chr1_4:14694362-14694381 None:intergenic 40.0%
GACTTCGACGAAACAAAATC+CGG - chr1_4:14694367-14694386 Msa0152150:intron 40.0%
GAAACAAAATCCGGCGTAAA+AGG - chr1_4:14694376-14694395 Msa0152150:intron 40.0%
GTAAAAGGCCTAATAGACTC+CGG - chr1_4:14694391-14694410 Msa0152150:intron 40.0%
AGTGAGGTCAGATAGAGTTT+CGG + chr1_4:14694452-14694471 None:intergenic 40.0%
TAAGTTCATCCGCTATAAGC+TGG + chr1_4:14694834-14694853 None:intergenic 40.0%
ATTACATGGGTAAAGCTGAG+AGG - chr1_4:14694993-14695012 Msa0152150:intron 40.0%
GATAAAGAAGTGGTTCGTGT+GGG - chr1_4:14695930-14695949 Msa0152150:intron 40.0%
! TCGTGTGGGAGATATTTTAC+TGG - chr1_4:14695944-14695963 Msa0152150:intron 40.0%
! CGTGTGGGAGATATTTTACT+GGG - chr1_4:14695945-14695964 Msa0152150:intron 40.0%
GGTTAGGATTACGTGAAGAA+AGG - chr1_4:14695982-14696001 Msa0152150:intron 40.0%
TGAAGAAAGGCTCACAGAAT+TGG - chr1_4:14695995-14696014 Msa0152150:intron 40.0%
GAAGAAAGGCTCACAGAATT+GGG - chr1_4:14695996-14696015 Msa0152150:intron 40.0%
TTGAGTCCAACGGTAAGATT+AGG + chr1_4:14696074-14696093 None:intergenic 40.0%
TGCATGAGAATTGAGTCCAA+CGG + chr1_4:14696084-14696103 None:intergenic 40.0%
TCAATTCTCATGCAGATCCT+GGG - chr1_4:14696090-14696109 Msa0152150:intron 40.0%
TTGTTGCAGGATCATATTGG+TGG - chr1_4:14696125-14696144 Msa0152150:intron 40.0%
! ATATTGGTGGCTTACAGGTT+AGG - chr1_4:14696138-14696157 Msa0152150:intron 40.0%
ATAACCAAAGCTCCATCAAG+AGG + chr1_4:14696191-14696210 None:intergenic 40.0%
! GGAGCTTTGGTTATCAACAT+TGG - chr1_4:14696197-14696216 Msa0152150:intron 40.0%
GATGGAAATCACAGGGTTAA+TGG - chr1_4:14696377-14696396 Msa0152150:intron 40.0%
GTCTCAGATAATTTCGAACG+AGG - chr1_4:14696499-14696518 Msa0152150:intron 40.0%
!!! GATTGCTGTTTTCCTAAACC+CGG - chr1_4:14696580-14696599 Msa0152150:CDS 40.0%
!!! ATTGCTGTTTTCCTAAACCC+GGG - chr1_4:14696581-14696600 Msa0152150:CDS 40.0%
! TTTTCCTAAACCCGGGTAAT+AGG - chr1_4:14696588-14696607 Msa0152150:CDS 40.0%
TTTCCTAAACCCGGGTAATA+GGG - chr1_4:14696589-14696608 Msa0152150:CDS 40.0%
CGCTCAACGAATTTATGACA+AGG - chr1_4:14696678-14696697 Msa0152150:CDS 40.0%
ATCTATAAAGCAGCGGTTTC+TGG - chr1_4:14696758-14696777 Msa0152150:CDS 40.0%
AAGCACTCATTAGTCATGAG+TGG + chr1_4:14697060-14697079 None:intergenic 40.0%
TTCCATGTCCCAAATACTTC+AGG - chr1_4:14697078-14697097 Msa0152150:five_prime_UTR 40.0%
! TTCCTGAAGTATTTGGGACA+TGG + chr1_4:14697083-14697102 None:intergenic 40.0%
! CCAGAACTTCCTGAAGTATT+TGG + chr1_4:14697090-14697109 None:intergenic 40.0%
CCAAATACTTCAGGAAGTTC+TGG - chr1_4:14697087-14697106 Msa0152150:five_prime_UTR 40.0%
GAATGTTTGTGTGTGGGGTT+TGG + chr1_4:14694239-14694258 None:intergenic 45.0%
! GTCTATTAGGCCTTTTACGC+CGG + chr1_4:14694389-14694408 None:intergenic 45.0%
GGTGGATGGATGAAGAATGA+TGG + chr1_4:14694430-14694449 None:intergenic 45.0%
GTGAGGTCAGATAGAGTTTC+GGG + chr1_4:14694451-14694470 None:intergenic 45.0%
AGAAATCTGATCGTGGAGTG+AGG + chr1_4:14694468-14694487 None:intergenic 45.0%
ACGATCAGATTTCTCCCAAC+CGG - chr1_4:14694474-14694493 Msa0152150:intron 45.0%
GAATCCAAACGTACTTGCAG+CGG + chr1_4:14694566-14694585 None:intergenic 45.0%
GAAGTTTCATGAACAGCCTG+CGG - chr1_4:14694648-14694667 Msa0152150:CDS 45.0%
TTACGTTGGTCGTTGCTTAC+AGG - chr1_4:14695379-14695398 Msa0152150:CDS 45.0%
TCGAGCACATTAGTCCCATT+GGG + chr1_4:14695753-14695772 None:intergenic 45.0%
CATGGAGTGGGATAAAGAAG+TGG - chr1_4:14695920-14695939 Msa0152150:intron 45.0%
GGATAAAGAAGTGGTTCGTG+TGG - chr1_4:14695929-14695948 Msa0152150:intron 45.0%
!! TTACTGGGCTTGTTGAGTGA+AGG - chr1_4:14695960-14695979 Msa0152150:intron 45.0%
!! TACTGGGCTTGTTGAGTGAA+GGG - chr1_4:14695961-14695980 Msa0152150:intron 45.0%
ACAGAATTGGGTTTGTCGCA+AGG - chr1_4:14696008-14696027 Msa0152150:intron 45.0%
CAGAATTGGGTTTGTCGCAA+GGG - chr1_4:14696009-14696028 Msa0152150:intron 45.0%
GAGGGCAAAATGGGTAATAG+TGG + chr1_4:14696049-14696068 None:intergenic 45.0%
GATTAGGCTGAGGGCAAAAT+GGG + chr1_4:14696058-14696077 None:intergenic 45.0%
AGATTAGGCTGAGGGCAAAA+TGG + chr1_4:14696059-14696078 None:intergenic 45.0%
CAACGGTAAGATTAGGCTGA+GGG + chr1_4:14696067-14696086 None:intergenic 45.0%
CTCAATTCTCATGCAGATCC+TGG - chr1_4:14696089-14696108 Msa0152150:intron 45.0%
CAATTCTCATGCAGATCCTG+GGG - chr1_4:14696091-14696110 Msa0152150:intron 45.0%
AACAATACTGTCAATGCCCC+AGG + chr1_4:14696110-14696129 None:intergenic 45.0%
!! GGCATTGACAGTATTGTTGC+AGG - chr1_4:14696112-14696131 Msa0152150:intron 45.0%
! GGATCATATTGGTGGCTTAC+AGG - chr1_4:14696133-14696152 Msa0152150:intron 45.0%
TTACAGGTTAGGTCCCAACA+TGG - chr1_4:14696149-14696168 Msa0152150:intron 45.0%
AAGAGCTTCTCCCTATTACC+CGG + chr1_4:14696602-14696621 None:intergenic 45.0%
GGTAATAGGGAGAAGCTCTT+TGG - chr1_4:14696602-14696621 Msa0152150:CDS 45.0%
!! GCTGATGTTAGCTCTGGTAA+AGG + chr1_4:14696629-14696648 None:intergenic 45.0%
TTCTCTGCTGATGTTAGCTC+TGG + chr1_4:14696635-14696654 None:intergenic 45.0%
ACCAAGCCGTTACACTAATC+TGG - chr1_4:14696944-14696963 Msa0152150:CDS 45.0%
ACCAGATTAGTGTAACGGCT+TGG + chr1_4:14696948-14696967 None:intergenic 45.0%
! ACGGCTTTTACACGGTCGTA+CGG + chr1_4:14694343-14694362 None:intergenic 50.0%
! CAGATAGAGTTTCGGGTGGA+TGG + chr1_4:14694444-14694463 None:intergenic 50.0%
AGGTCAGATAGAGTTTCGGG+TGG + chr1_4:14694448-14694467 None:intergenic 50.0%
GGTTGGGAGAAATCTGATCG+TGG + chr1_4:14694475-14694494 None:intergenic 50.0%
!! GATGGTGGGAATTTCCGGTT+GGG + chr1_4:14694491-14694510 None:intergenic 50.0%
!! AGGTCGATGGTGGGAATTTC+CGG + chr1_4:14694496-14694515 None:intergenic 50.0%
GTTTATGGCTGAGAGGTCGA+TGG + chr1_4:14694509-14694528 None:intergenic 50.0%
GGGAATGGTTTATGGCTGAG+AGG + chr1_4:14694516-14694535 None:intergenic 50.0%
ACGAAGCTGATCAACGACAG+CGG + chr1_4:14694542-14694561 None:intergenic 50.0%
! AGAGGAAGAAGGTGTACCGT+AGG - chr1_4:14694674-14694693 Msa0152150:CDS 50.0%
! GAGGAAGAAGGTGTACCGTA+GGG - chr1_4:14694675-14694694 Msa0152150:CDS 50.0%
AAGGTGTACCGTAGGGAGAT+GGG - chr1_4:14694682-14694701 Msa0152150:CDS 50.0%
GTCGAGCACATTAGTCCCAT+TGG + chr1_4:14695754-14695773 None:intergenic 50.0%
GAATCTCCTTCTCTTCCGCT+GGG + chr1_4:14695878-14695897 None:intergenic 50.0%
AGCGGAAGAGAAGGAGATTC+CGG - chr1_4:14695878-14695897 Msa0152150:intron 50.0%
!! GGCTTGTTGAGTGAAGGGTT+AGG - chr1_4:14695966-14695985 Msa0152150:intron 50.0%
AATTGGGTTTGTCGCAAGGG+AGG - chr1_4:14696012-14696031 Msa0152150:intron 50.0%
ATTGGGTTTGTCGCAAGGGA+GGG - chr1_4:14696013-14696032 Msa0152150:intron 50.0%
CCAACGGTAAGATTAGGCTG+AGG + chr1_4:14696068-14696087 None:intergenic 50.0%
CCTCAGCCTAATCTTACCGT+TGG - chr1_4:14696065-14696084 Msa0152150:intron 50.0%
AGGTTAGGTCCCAACATGGT+TGG - chr1_4:14696153-14696172 Msa0152150:intron 50.0%
CAAGCCTCTTGATGGAGCTT+TGG - chr1_4:14696184-14696203 Msa0152150:intron 50.0%
CCAATCCTTCTAACGAGCCA+CGG - chr1_4:14696552-14696571 Msa0152150:CDS 50.0%
CAATCCTTCTAACGAGCCAC+GGG - chr1_4:14696553-14696572 Msa0152150:CDS 50.0%
AAAACAGCAATCGAGACCCG+TGG + chr1_4:14696572-14696591 None:intergenic 50.0%
TCTCCCTATTACCCGGGTTT+AGG + chr1_4:14696595-14696614 None:intergenic 50.0%
AGAGCTTCTCCCTATTACCC+GGG + chr1_4:14696601-14696620 None:intergenic 50.0%
! GTCGTACGGTGGTGATGAGA+CGG + chr1_4:14694329-14694348 None:intergenic 55.0%
! GCTTTTACACGGTCGTACGG+TGG + chr1_4:14694340-14694359 None:intergenic 55.0%
!! CGATGGTGGGAATTTCCGGT+TGG + chr1_4:14694492-14694511 None:intergenic 55.0%
ATGGCTGAGAGGTCGATGGT+GGG + chr1_4:14694505-14694524 None:intergenic 55.0%
TATGGCTGAGAGGTCGATGG+TGG + chr1_4:14694506-14694525 None:intergenic 55.0%
AGCGGCACGGGAATGGTTTA+TGG + chr1_4:14694524-14694543 None:intergenic 55.0%
CGTTCCGCTGCAAGTACGTT+TGG - chr1_4:14694559-14694578 Msa0152150:intron 55.0%
! GAAGGTGTACCGTAGGGAGA+TGG - chr1_4:14694681-14694700 Msa0152150:CDS 55.0%
TACCGTAGGGAGATGGGAAC+TGG - chr1_4:14694688-14694707 Msa0152150:CDS 55.0%
CACCAGTTCCCATCTCCCTA+CGG + chr1_4:14694693-14694712 None:intergenic 55.0%
!! TCGCTTCTAAAGCTGCCAGC+TGG - chr1_4:14694740-14694759 Msa0152150:CDS 55.0%
TAAGATGGGACCTGTCCCAG+CGG - chr1_4:14695860-14695879 Msa0152150:intron 55.0%
GGAATCTCCTTCTCTTCCGC+TGG + chr1_4:14695879-14695898 None:intergenic 55.0%
GGAAGAGAAGGAGATTCCGG+AGG - chr1_4:14695881-14695900 Msa0152150:intron 55.0%
! AGGAGATTCCGGAGGTATGC+AGG - chr1_4:14695889-14695908 Msa0152150:intron 55.0%
! GATTCCGGAGGTATGCAGGA+AGG - chr1_4:14695893-14695912 Msa0152150:intron 55.0%
ACCTCCTTCCTGCATACCTC+CGG + chr1_4:14695900-14695919 None:intergenic 55.0%
GGTATGCAGGAAGGAGGTCA+TGG - chr1_4:14695902-14695921 Msa0152150:intron 55.0%
CAGGAAGGAGGTCATGGAGT+GGG - chr1_4:14695908-14695927 Msa0152150:intron 55.0%
TTTGTCGCAAGGGAGGGTGA+TGG - chr1_4:14696019-14696038 Msa0152150:intron 55.0%
CCGTGGCTCGTTAGAAGGAT+TGG + chr1_4:14696555-14696574 None:intergenic 55.0%
!! GGTGGTTGGTGGTGGTGAAG+GGG + chr1_4:14694308-14694327 None:intergenic 60.0%
!! CGGTGGTTGGTGGTGGTGAA+GGG + chr1_4:14694309-14694328 None:intergenic 60.0%
!! ACGGTGGTTGGTGGTGGTGA+AGG + chr1_4:14694310-14694329 None:intergenic 60.0%
!! GATGAGACGGTGGTTGGTGG+TGG + chr1_4:14694316-14694335 None:intergenic 60.0%
GGTGATGAGACGGTGGTTGG+TGG + chr1_4:14694319-14694338 None:intergenic 60.0%
! GGTGGTGATGAGACGGTGGT+TGG + chr1_4:14694322-14694341 None:intergenic 60.0%
! GTACGGTGGTGATGAGACGG+TGG + chr1_4:14694326-14694345 None:intergenic 60.0%
CTGATCAACGACAGCGGCAC+GGG + chr1_4:14694536-14694555 None:intergenic 60.0%
GCTGATCAACGACAGCGGCA+CGG + chr1_4:14694537-14694556 None:intergenic 60.0%
GATCAACCATGGAGTCGCGC+CGG - chr1_4:14694594-14694613 Msa0152150:intron 60.0%
TCAATTCCGGCGCGACTCCA+TGG + chr1_4:14694603-14694622 None:intergenic 60.0%
ATGAACAGCCTGCGGACGAG+AGG - chr1_4:14694656-14694675 Msa0152150:CDS 60.0%
ACCTTCTTCCTCTCGTCCGC+AGG + chr1_4:14694667-14694686 None:intergenic 60.0%
ACCTGTCCCAGCGGAAGAGA+AGG - chr1_4:14695869-14695888 Msa0152150:intron 60.0%
TCCTTCTCTTCCGCTGGGAC+AGG + chr1_4:14695873-14695892 None:intergenic 60.0%
! TCCGGAGGTATGCAGGAAGG+AGG - chr1_4:14695896-14695915 Msa0152150:intron 60.0%
GCAGGAAGGAGGTCATGGAG+TGG - chr1_4:14695907-14695926 Msa0152150:intron 60.0%
! TCGCAAGGGAGGGTGATGGT+TGG - chr1_4:14696023-14696042 Msa0152150:intron 60.0%
GAGACCCGTGGCTCGTTAGA+AGG + chr1_4:14696560-14696579 None:intergenic 60.0%
GGTGGTGAAGGGGTGGCGAT+TGG + chr1_4:14694298-14694317 None:intergenic 65.0%
!! GGTTGGTGGTGGTGAAGGGG+TGG + chr1_4:14694305-14694324 None:intergenic 65.0%
CAACGACAGCGGCACGGGAA+TGG + chr1_4:14694531-14694550 None:intergenic 65.0%
GCCTGCGGACGAGAGGAAGA+AGG - chr1_4:14694663-14694682 Msa0152150:CDS 65.0%
CTGAAGCGTGTCACGCCAGC+TGG + chr1_4:14694758-14694777 None:intergenic 65.0%
CAGCTGGCGTGACACGCTTC+AGG - chr1_4:14694756-14694775 Msa0152150:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 14694118 14697200 14694118 ID=Msa0152150;Name=Msa0152150
chr1_4 mRNA 14694118 14697200 14694118 ID=Msa0152150-mRNA-1;Parent=Msa0152150;Name=Msa0152150-mRNA-1;_AED=0.16;_eAED=0.16;_QI=165|0.66|0.5|0.75|1|1|4|0|395
chr1_4 exon 14694118 14694218 14694118 ID=Msa0152150-mRNA-1:exon:5809;Parent=Msa0152150-mRNA-1
chr1_4 exon 14694596 14694812 14694596 ID=Msa0152150-mRNA-1:exon:5808;Parent=Msa0152150-mRNA-1
chr1_4 exon 14695086 14695460 14695086 ID=Msa0152150-mRNA-1:exon:5807;Parent=Msa0152150-mRNA-1
chr1_4 exon 14696541 14697200 14696541 ID=Msa0152150-mRNA-1:exon:5806;Parent=Msa0152150-mRNA-1
chr1_4 five_prime_UTR 14697036 14697200 14697036 ID=Msa0152150-mRNA-1:five_prime_utr;Parent=Msa0152150-mRNA-1
chr1_4 CDS 14696541 14697035 14696541 ID=Msa0152150-mRNA-1:cds;Parent=Msa0152150-mRNA-1
chr1_4 CDS 14695086 14695460 14695086 ID=Msa0152150-mRNA-1:cds;Parent=Msa0152150-mRNA-1
chr1_4 CDS 14694596 14694812 14694596 ID=Msa0152150-mRNA-1:cds;Parent=Msa0152150-mRNA-1
chr1_4 CDS 14694118 14694218 14694118 ID=Msa0152150-mRNA-1:cds;Parent=Msa0152150-mRNA-1
Gene Sequence

>Msa0152150

ATGTCATCATCACCAATCGCCACCCCTTCACCACCACCAACCACCGTCTCATCACCACCGTACGACCGTGTAAAAGCCGTGAAAGACTTCGACGAAACAAAATCCGGCGTAAAAGGCCTAATAGACTCCGGAATCAAAACCATTCCATCATTCTTCATCCATCCACCCGAAACTCTATCTGACCTCACTCCACGATCAGATTTCTCCCAACCGGAAATTCCCACCATCGACCTCTCAGCCATAAACCATTCCCGTGCCGCTGTCGTTGATCAGCTTCGTTCCGCTGCAAGTACGTTTGGATTCTTTCAAGTGATCAACCATGGAGTCGCGCCGGAATTGATGCGAAACGTTATTGGTGCTATGAAGAAGTTTCATGAACAGCCTGCGGACGAGAGGAAGAAGGTGTACCGTAGGGAGATGGGAACTGGTGTTTCGTATATATCAAATGTTGATCTTTTCGCTTCTAAAGCTGCCAGCTGGCGTGACACGCTTCAGATTAAGATGGGACCTGTCCCAGCGGAAGAGAAGGAGATTCCGGAGGTATGCAGGAAGGAGGTCATGGAGTGGGATAAAGAAGTGGTTCGTGTGGGAGATATTTTACTGGGCTTGTTGAGTGAAGGGTTAGGATTACGTGAAGAAAGGCTCACAGAATTGGGTTTGTCGCAAGGGAGGGTGATGGTTGGCCACTATTACCCATTTTGCCCTCAGCCTAATCTTACCGTTGGACTCAATTCTCATGCAGATCCTGGGGCATTGACAGTATTGTTGCAGGATCATATTGGTGGCTTACAGGTTAGGTCCCAACATGGTTGGATTAATGTCAAGCCTCTTGATGGAGCTTTGGTTATCAACATTGGAGATTTATTTCAGATAATTTCGAACGAGGAGTATAAGAGTGCTGATCACCGTGTATTAGCCAATCCTTCTAACGAGCCACGGGTCTCGATTGCTGTTTTCCTAAACCCGGGTAATAGGGAGAAGCTCTTTGGTCCTTTACCAGAGCTAACATCAGCAGAGAAGCCAGCTCTTTATAGAGATTTCACGCTCAACGAATTTATGACAAGGTTCTTTAAGAAAGAGCTTGATGGAAGTTCTGGTACCATTATTGATGAATCCTATGATATTGTGAATCAAAATCAATTCCTATCATCTTATGGTATCGGTTCAGTTTCAAAGAAATCTATATAA
Protein sequence

>Msa0152150

MSSSPIATPSPPPTTVSSPPYDRVKAVKDFDETKSGVKGLIDSGIKTIPSFFIHPPETLSDLTPRSDFSQPEIPTIDLSAINHSRAAVVDQLRSAASTFGFFQVINHGVAPELMRNVIGAMKKFHEQPADERKKVYRREMGTGVSYISNVDLFASKAASWRDTLQIKMGPVPAEEKEIPEVCRKEVMEWDKEVVRVGDILLGLLSEGLGLREERLTELGLSQGRVMVGHYYPFCPQPNLTVGLNSHADPGALTVLLQDHIGGLQVRSQHGWINVKPLDGALVINIGDLFQIISNEEYKSADHRVLANPSNEPRVSIAVFLNPGNREKLFGPLPELTSAEKPALYRDFTLNEFMTRFFKKELDGSSGTIIDESYDIVNQNQFLSSYGIGSVSKKSI*