AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0012720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012720 MtrunA17_Chr8g0381541 61.866 493 179 3 1 485 1 492 0.0 657
Msa0012720 MtrunA17_Chr8g0381571 60.738 461 172 3 1 453 1 460 0.0 602
Msa0012720 MtrunA17_Chr8g0339861 55.556 495 204 7 1 485 1 489 0.0 551
Msa0012720 MtrunA17_Chr5g0400421 54.472 492 209 5 3 483 4 491 0.0 545
Msa0012720 MtrunA17_Chr1g0161671 75.851 323 64 2 1 320 1 312 1.92e-175 495
Msa0012720 MtrunA17_Chr5g0400411 51.429 490 226 6 3 483 4 490 4.04e-171 491
Msa0012720 MtrunA17_Chr2g0293421 47.010 485 250 4 6 485 9 491 2.38e-164 473
Msa0012720 MtrunA17_Chr2g0293411 45.585 487 257 3 6 485 5 490 6.81e-163 469
Msa0012720 MtrunA17_Chr1g0161651 66.250 320 64 3 1 276 1 320 9.97e-141 407
Msa0012720 MtrunA17_Chr8g0381551 56.402 328 134 3 1 320 1 327 2.16e-137 399
Msa0012720 MtrunA17_Chr4g0000171 52.439 328 143 6 1 320 1 323 2.25e-114 340
Msa0012720 MtrunA17_Chr4g0000161 50.610 328 149 5 1 320 1 323 2.26e-107 322
Msa0012720 MtrunA17_Chr4g0013471 50.299 334 153 5 1 326 1 329 2.26e-107 325
Msa0012720 MtrunA17_Chr1g0161691 92.029 138 11 0 99 236 1 138 2.04e-88 266
Msa0012720 MtrunA17_Chr1g0153371 33.042 457 292 9 32 485 27 472 9.16e-76 246
Msa0012720 MtrunA17_Chr5g0408181 34.009 444 275 10 12 453 7 434 4.01e-75 243
Msa0012720 MtrunA17_Chr4g0044851 32.339 436 284 6 40 474 37 462 1.81e-73 239
Msa0012720 MtrunA17_Chr3g0089361 30.197 457 307 8 27 478 24 473 2.27e-73 239
Msa0012720 MtrunA17_Chr7g0226771 32.251 431 280 6 38 464 31 453 2.11e-72 237
Msa0012720 MtrunA17_Chr6g0455461 31.760 466 279 13 8 460 4 443 4.81e-69 228
Msa0012720 MtrunA17_Chr3g0078411 31.466 464 279 13 8 458 4 441 5.01e-69 228
Msa0012720 MtrunA17_Chr8g0369791 33.182 440 276 10 37 474 34 457 6.72e-69 227
Msa0012720 MtrunA17_Chr8g0341951 30.973 452 297 7 6 453 5 445 1.43e-68 226
Msa0012720 MtrunA17_Chr4g0044841 32.143 420 268 7 40 455 38 444 7.16e-67 222
Msa0012720 MtrunA17_Chr5g0403931 31.519 441 278 10 40 467 36 465 4.47e-65 218
Msa0012720 MtrunA17_Chr6g0478161 29.234 431 284 10 40 460 50 469 7.13e-64 215
Msa0012720 MtrunA17_Chr7g0219961 30.283 459 296 12 7 460 3 442 1.49e-63 213
Msa0012720 MtrunA17_Chr3g0089351 28.358 402 281 5 81 482 1 395 2.47e-62 208
Msa0012720 MtrunA17_Chr1g0164371 31.343 469 304 9 12 479 22 473 2.93e-62 210
Msa0012720 MtrunA17_Chr3g0113321 29.673 428 279 8 32 449 21 436 3.32e-62 210
Msa0012720 MtrunA17_Chr4g0000151 65.926 135 45 1 351 485 12 145 1.54e-60 195
Msa0012720 MtrunA17_Chr8g0388921 28.018 439 309 5 40 474 34 469 1.95e-60 205
Msa0012720 MtrunA17_Chr5g0397971 28.070 456 305 10 6 453 2 442 1.60e-59 203
Msa0012720 MtrunA17_Chr8g0372411 30.445 427 268 11 41 453 40 451 4.93e-59 202
Msa0012720 MtrunA17_Chr3g0107511 27.626 438 307 6 40 471 33 466 1.24e-55 192
Msa0012720 MtrunA17_Chr8g0373441 32.225 391 246 10 31 412 24 404 4.08e-55 190
Msa0012720 MtrunA17_Chr3g0107501 27.438 441 304 7 40 471 33 466 1.88e-53 187
Msa0012720 MtrunA17_Chr5g0443401 27.391 460 311 10 19 471 23 466 6.18e-53 185
Msa0012720 MtrunA17_Chr8g0380471 26.042 480 337 8 1 474 1 468 1.60e-50 179
Msa0012720 MtrunA17_Chr8g0381561 67.273 110 36 0 344 453 2 111 9.71e-50 166
Msa0012720 MtrunA17_Chr8g0372711 28.054 442 291 10 42 464 48 481 1.42e-47 171
Msa0012720 MtrunA17_Chr3g0141801 27.865 445 304 11 27 463 29 464 1.73e-47 171
Msa0012720 MtrunA17_Chr5g0443731 24.439 446 325 10 40 479 29 468 3.05e-45 164
Msa0012720 MtrunA17_Chr8g0380931 24.832 447 313 11 40 474 62 497 3.37e-44 162
Msa0012720 MtrunA17_Chr1g0161661 76.404 89 21 0 394 482 12 100 5.84e-44 150
Msa0012720 MtrunA17_Chr1g0161641 75.949 79 19 0 375 453 10 88 9.37e-37 130
Msa0012720 MtrunA17_Chr5g0400391 64.368 87 31 0 395 481 1 87 1.55e-35 127
Msa0012720 MtrunA17_Chr8g0356001 25.676 444 272 15 32 437 32 455 2.84e-28 117
Msa0012720 MtrunA17_Chr3g0116741 24.374 439 280 13 29 433 40 460 7.65e-27 113
Msa0012720 MtrunA17_Chr5g0445421 23.758 463 294 17 12 448 88 517 4.61e-26 111
Msa0012720 MtrunA17_Chr8g0372251 25.618 445 266 17 32 433 28 450 2.37e-25 108
Msa0012720 MtrunA17_Chr5g0445451 24.576 472 304 16 12 452 14 464 2.54e-25 108
Msa0012720 MtrunA17_Chr8g0355961 23.983 467 296 14 8 437 11 455 2.79e-25 108
Msa0012720 MtrunA17_Chr5g0405001 24.454 458 283 16 33 449 39 474 2.80e-25 108
Msa0012720 MtrunA17_Chr5g0437001 37.121 132 80 1 345 473 1 132 8.97e-25 100
Msa0012720 MtrunA17_Chr5g0445381 23.983 467 310 19 12 448 44 495 9.53e-25 107
Msa0012720 MtrunA17_Chr7g0235551 23.505 485 310 17 1 445 2 465 9.59e-25 107
Msa0012720 MtrunA17_Chr5g0395321 24.048 499 297 18 3 455 4 466 1.51e-24 106
Msa0012720 MtrunA17_Chr3g0116681 24.230 487 303 18 14 461 15 474 3.16e-24 105
Msa0012720 MtrunA17_Chr1g0205361 25.727 447 265 21 32 437 26 446 9.02e-24 104
Msa0012720 MtrunA17_Chr7g0255531 23.679 473 301 20 28 459 17 470 1.85e-23 103
Msa0012720 MtrunA17_Chr4g0058281 24.890 454 290 16 41 458 47 485 2.40e-23 103
Msa0012720 MtrunA17_Chr5g0404861 35.036 137 79 2 325 455 2 134 2.42e-23 96.3
Msa0012720 MtrunA17_Chr3g0084921 25.843 445 264 17 40 437 35 460 5.73e-23 102
Msa0012720 MtrunA17_Chr5g0430031 24.490 490 303 23 9 454 6 472 7.68e-23 101
Msa0012720 MtrunA17_Chr1g0197851 26.835 436 268 19 34 437 28 444 8.59e-23 101
Msa0012720 MtrunA17_Chr1g0197881 26.835 436 268 19 34 437 27 443 9.51e-23 100
Msa0012720 MtrunA17_Chr5g0445441 22.747 466 316 17 12 448 55 505 1.04e-22 101
Msa0012720 MtrunA17_Chr5g0431671 26.126 444 277 18 40 448 38 465 1.13e-22 100
Msa0012720 MtrunA17_Chr5g0430081 25.000 472 289 22 12 441 7 455 2.24e-22 100
Msa0012720 MtrunA17_Chr3g0089291 23.431 239 179 3 81 319 1 235 2.39e-22 95.9
Msa0012720 MtrunA17_Chr1g0197891 26.078 464 282 21 6 437 10 444 2.59e-22 99.8
Msa0012720 MtrunA17_Chr1g0160851 24.638 483 301 20 7 455 11 464 3.14e-22 99.4
Msa0012720 MtrunA17_Chr5g0401691 23.146 445 305 14 40 460 51 482 3.16e-22 99.8
Msa0012720 MtrunA17_Chr5g0395381 24.641 487 284 20 3 455 4 441 4.45e-22 99.0
Msa0012720 MtrunA17_Chr1g0161681 54.945 91 12 2 395 485 1 62 4.93e-22 89.4
Msa0012720 MtrunA17_Chr6g0458561 23.568 454 291 15 43 457 66 502 5.24e-22 99.0
Msa0012720 MtrunA17_Chr1g0198191 20.877 479 323 15 15 453 20 482 5.48e-22 99.0
Msa0012720 MtrunA17_Chr4g0058191 26.637 443 272 19 24 434 15 436 6.17e-22 98.6
Msa0012720 MtrunA17_Chr8g0361471 25.806 496 273 21 12 448 6 465 7.86e-22 98.2
Msa0012720 MtrunA17_Chr5g0445461 23.226 465 315 17 12 448 14 464 8.40e-22 98.2
Msa0012720 MtrunA17_Chr4g0058231 23.299 485 316 18 9 455 2 468 9.11e-22 98.2
Msa0012720 MtrunA17_Chr8g0344151 26.490 453 275 20 37 448 33 468 1.00e-21 98.2
Msa0012720 MtrunA17_Chr4g0052851 23.620 453 285 16 40 460 33 456 1.21e-21 97.8
Msa0012720 MtrunA17_Chr4g0024771 23.451 452 308 16 41 464 39 480 1.52e-21 97.4
Msa0012720 MtrunA17_Chr4g0053621 22.424 495 315 19 9 460 1 469 1.68e-21 97.4
Msa0012720 MtrunA17_Chr5g0431641 25.054 467 305 18 12 448 13 464 1.78e-21 97.4
Msa0012720 MtrunA17_Chr6g0451781 22.736 497 301 19 46 475 80 560 2.06e-21 97.4
Msa0012720 MtrunA17_Chr2g0310391 22.461 512 327 21 9 476 1 486 2.57e-21 96.7
Msa0012720 MtrunA17_Chr3g0101721 22.222 459 297 18 32 448 27 467 3.17e-21 96.7
Msa0012720 MtrunA17_Chr4g0058261 23.673 452 297 16 37 454 62 499 3.52e-21 96.7
Msa0012720 MtrunA17_Chr3g0101611 24.396 455 289 16 40 458 38 473 3.63e-21 96.3
Msa0012720 MtrunA17_Chr4g0035921 22.432 477 304 16 29 458 26 483 3.74e-21 96.3
Msa0012720 MtrunA17_Chr5g0395331 23.251 486 277 17 29 455 25 473 4.68e-21 95.9
Msa0012720 MtrunA17_Chr6g0451681 21.413 467 290 18 18 460 37 450 4.85e-21 95.9
Msa0012720 MtrunA17_Chr5g0401681 22.658 459 292 17 40 460 32 465 5.13e-21 95.9
Msa0012720 MtrunA17_Chr5g0403321 24.078 461 290 16 32 448 26 470 6.21e-21 95.5
Msa0012720 MtrunA17_Chr2g0310381 23.107 515 326 21 9 479 1 489 6.40e-21 95.5
Msa0012720 MtrunA17_Chr5g0430131 23.319 476 307 19 12 449 9 464 1.37e-20 94.7
Msa0012720 MtrunA17_Chr6g0463551 29.508 183 111 3 206 377 14 189 1.45e-20 89.7
Msa0012720 MtrunA17_Chr4g0047631 23.729 472 313 18 9 448 20 476 2.06e-20 94.0
Msa0012720 MtrunA17_Chr6g0451811 27.830 212 127 6 286 475 1 208 2.54e-20 89.4
Msa0012720 MtrunA17_Chr1g0205371 24.280 486 302 23 7 455 11 467 2.57e-20 93.6
Msa0012720 MtrunA17_Chr6g0463801 24.274 482 308 16 1 449 1 458 2.58e-20 93.6
Msa0012720 MtrunA17_Chr1g0174451 23.093 485 312 17 41 476 37 509 2.72e-20 93.6
Msa0012720 MtrunA17_Chr1g0197871 24.842 475 300 19 32 467 26 482 3.55e-20 93.2
Msa0012720 MtrunA17_Chr8g0390881 23.270 477 303 18 15 448 12 468 3.55e-20 93.2
Msa0012720 MtrunA17_Chr3g0101831 24.348 460 285 20 32 448 27 466 4.00e-20 93.2
Msa0012720 MtrunA17_Chr2g0314721 30.165 242 153 7 238 467 254 491 4.09e-20 93.2
Msa0012720 MtrunA17_Chr8g0339331 24.464 466 294 19 30 455 36 483 4.73e-20 93.2
Msa0012720 MtrunA17_Chr8g0344191 23.482 494 303 20 6 454 43 506 5.68e-20 92.8
Msa0012720 MtrunA17_Chr8g0344181 25.109 458 285 19 37 454 35 474 6.38e-20 92.4
Msa0012720 MtrunA17_Chr5g0403351 22.981 483 310 18 10 448 3 467 6.74e-20 92.4
Msa0012720 MtrunA17_Chr3g0101801 24.609 447 287 17 38 448 40 472 8.20e-20 92.4
Msa0012720 MtrunA17_Chr8g0346261 28.571 231 148 6 239 458 296 520 8.74e-20 92.4
Msa0012720 MtrunA17_Chr4g0039901 23.427 461 281 18 40 455 35 468 8.78e-20 92.0
Msa0012720 MtrunA17_Chr1g0174441 21.730 474 316 15 2 437 22 478 8.89e-20 92.4
Msa0012720 MtrunA17_Chr1g0164211 23.776 429 280 15 40 437 31 443 1.11e-19 91.7
Msa0012720 MtrunA17_Chr5g0445531 23.371 445 286 17 40 448 38 463 1.12e-19 91.7
Msa0012720 MtrunA17_Chr6g0451641 22.629 464 291 20 41 454 39 484 1.22e-19 91.7
Msa0012720 MtrunA17_Chr4g0058201 24.835 455 295 19 26 448 17 456 1.23e-19 91.7
Msa0012720 MtrunA17_Chr3g0101631 22.717 449 283 18 40 448 36 460 1.53e-19 91.3
Msa0012720 MtrunA17_Chr4g0046631 24.894 470 272 21 35 448 40 484 1.98e-19 91.3
Msa0012720 MtrunA17_Chr6g0465511 25.855 468 252 20 40 448 34 465 2.18e-19 90.9
Msa0012720 MtrunA17_Chr3g0089381 25.434 173 123 2 209 377 22 192 2.78e-19 86.7
Msa0012720 MtrunA17_Chr6g0466331 25.641 468 253 20 40 448 34 465 2.83e-19 90.5
Msa0012720 MtrunA17_Chr5g0431511 24.945 453 287 17 40 455 33 469 3.20e-19 90.5
Msa0012720 MtrunA17_Chr4g0076161 22.366 465 304 17 24 448 20 467 6.11e-19 89.4
Msa0012720 MtrunA17_Chr7g0246221 23.965 459 278 16 40 452 34 467 6.41e-19 89.4
Msa0012720 MtrunA17_Chr8g0364651 21.818 495 335 15 1 463 1 475 7.07e-19 89.4
Msa0012720 MtrunA17_Chr1g0176831 27.273 242 160 6 238 467 273 510 9.42e-19 89.0
Msa0012720 MtrunA17_Chr6g0463541 46.429 84 44 1 377 460 6 88 1.25e-18 81.3
Msa0012720 MtrunA17_Chr3g0101821 23.312 459 278 18 38 448 33 465 1.36e-18 88.6
Msa0012720 MtrunA17_Chr6g0466941 22.737 475 289 19 34 448 27 483 1.43e-18 88.6
Msa0012720 MtrunA17_Chr6g0451741 25.523 239 159 5 238 461 286 520 1.49e-18 88.6
Msa0012720 MtrunA17_Chr5g0446151 22.297 444 295 12 40 452 41 465 1.54e-18 88.2
Msa0012720 MtrunA17_Chr3g0101621 22.748 444 297 16 40 454 33 459 1.55e-18 88.2
Msa0012720 MtrunA17_Chr4g0017411 29.680 219 146 4 243 460 242 453 1.58e-18 88.2
Msa0012720 MtrunA17_Chr1g0174481 21.963 428 292 11 41 437 35 451 1.62e-18 88.2
Msa0012720 MtrunA17_Chr8g0334891 21.847 444 301 13 40 459 38 459 1.99e-18 87.8
Msa0012720 MtrunA17_Chr1g0162801 21.677 489 320 17 1 448 1 467 1.99e-18 87.8
Msa0012720 MtrunA17_Chr3g0101751 23.377 462 274 17 38 448 40 472 2.26e-18 87.8
Msa0012720 MtrunA17_Chr4g0046331 21.810 431 280 12 72 459 63 479 2.36e-18 87.8
Msa0012720 MtrunA17_Chr2g0314731 28.099 242 158 6 238 467 243 480 2.74e-18 87.4
Msa0012720 MtrunA17_Chr5g0446161 22.299 435 305 13 40 452 41 464 2.91e-18 87.4
Msa0012720 MtrunA17_Chr4g0057001 22.004 459 312 16 27 452 35 480 3.10e-18 87.4
Msa0012720 MtrunA17_Chr7g0218601 23.146 445 301 15 40 455 34 466 3.65e-18 87.0
Msa0012720 MtrunA17_Chr4g0046351 21.226 424 281 11 72 455 63 473 4.07e-18 87.0
Msa0012720 MtrunA17_Chr3g0101601 22.523 444 301 16 40 454 36 465 4.64e-18 86.7
Msa0012720 MtrunA17_Chr6g0451691 20.378 476 307 14 41 460 42 501 4.75e-18 87.0
Msa0012720 MtrunA17_Chr2g0296661 25.581 215 154 3 243 456 257 466 5.01e-18 86.7
Msa0012720 MtrunA17_Chr4g0052881 26.009 223 157 4 239 460 251 466 6.64e-18 86.3
Msa0012720 MtrunA17_Chr4g0011961 22.965 479 314 21 9 452 1 459 9.67e-18 85.9
Msa0012720 MtrunA17_Chr5g0431591 27.039 233 146 9 230 448 60 282 1.20e-17 84.0
Msa0012720 MtrunA17_Chr1g0160861 29.204 226 145 7 239 455 86 305 1.41e-17 84.0
Msa0012720 MtrunA17_Chr5g0419691 23.935 493 309 20 34 480 23 495 1.41e-17 85.1
Msa0012720 MtrunA17_Chr8g0357421 23.400 453 297 18 32 448 27 465 1.64e-17 85.1
Msa0012720 MtrunA17_Chr1g0162811 20.833 480 319 16 8 448 7 464 2.19e-17 84.7
Msa0012720 MtrunA17_Chr1g0203141 25.000 308 206 11 169 459 191 490 2.23e-17 84.7
Msa0012720 MtrunA17_Chr4g0046321 21.678 429 289 10 72 463 63 481 2.33e-17 84.7
Msa0012720 MtrunA17_Chr7g0218611 22.149 456 316 16 29 455 22 467 2.73e-17 84.3
Msa0012720 MtrunA17_Chr3g0135841 25.304 494 267 22 32 452 39 503 2.91e-17 84.3
Msa0012720 MtrunA17_Chr3g0101731 24.229 454 279 19 38 448 34 465 3.33e-17 84.3
Msa0012720 MtrunA17_Chr7g0215181 22.444 450 298 12 31 445 38 471 3.53e-17 84.0
Msa0012720 MtrunA17_Chr4g0011871 24.784 464 285 21 34 455 23 464 4.43e-17 84.0
Msa0012720 MtrunA17_Chr4g0052861 22.268 485 320 18 8 460 6 465 5.39e-17 83.6
Msa0012720 MtrunA17_Chr8g0334941 25.641 234 159 4 236 459 76 304 5.51e-17 82.0
Msa0012720 MtrunA17_Chr8g0362481 25.328 229 152 6 224 437 163 387 6.41e-17 82.8
Msa0012720 MtrunA17_Chr5g0404881 29.469 207 138 6 30 234 27 227 6.83e-17 80.1
Msa0012720 MtrunA17_Chr8g0351801 26.180 233 141 4 232 437 239 467 7.09e-17 83.2
Msa0012720 MtrunA17_Chr6g0451751 27.053 207 134 5 255 448 287 489 7.10e-17 83.2
Msa0012720 MtrunA17_Chr7g0265611 24.528 477 296 17 32 466 38 492 9.14e-17 82.8
Msa0012720 MtrunA17_Chr3g0101671 24.729 461 266 22 40 448 38 469 9.86e-17 82.8
Msa0012720 MtrunA17_Chr7g0235261 23.598 428 260 17 75 461 87 488 1.07e-16 82.8
Msa0012720 MtrunA17_Chr3g0101761 22.030 463 279 18 38 448 33 465 1.09e-16 82.4
Msa0012720 MtrunA17_Chr4g0047661 21.951 451 289 17 24 433 34 462 1.18e-16 82.4
Msa0012720 MtrunA17_Chr1g0174461 21.130 478 311 16 2 437 3 456 1.34e-16 82.4
Msa0012720 MtrunA17_Chr5g0431501 24.781 456 284 20 40 455 33 469 1.34e-16 82.4
Msa0012720 MtrunA17_Chr5g0431461 24.781 456 284 20 40 455 33 469 1.34e-16 82.4
Msa0012720 MtrunA17_Chr5g0446101 28.846 208 137 3 252 452 74 277 1.53e-16 80.5
Msa0012720 MtrunA17_Chr6g0466901 29.412 187 120 5 280 458 306 488 1.64e-16 82.0
Msa0012720 MtrunA17_Chr5g0419451 27.232 224 148 7 239 453 268 485 2.05e-16 81.6
Msa0012720 MtrunA17_Chr4g0061381 29.960 247 141 11 214 437 215 452 2.40e-16 81.6
Msa0012720 MtrunA17_Chr4g0039391 22.380 353 245 8 133 460 126 474 2.48e-16 81.6
Msa0012720 MtrunA17_Chr2g0280071 22.495 489 315 19 7 452 36 503 2.53e-16 82.0
Msa0012720 MtrunA17_Chr7g0246151 27.434 226 150 7 238 453 246 467 2.99e-16 81.3
Msa0012720 MtrunA17_Chr5g0403331 21.677 489 321 20 1 448 1 468 3.67e-16 80.9
Msa0012720 MtrunA17_Chr6g0457421 22.897 428 283 15 74 472 88 497 3.80e-16 80.9
Msa0012720 MtrunA17_Chr4g0046681 29.070 172 105 5 289 448 30 196 5.02e-16 77.4
Msa0012720 MtrunA17_Chr4g0026941 26.496 234 146 9 240 460 295 515 5.67e-16 80.5
Msa0012720 MtrunA17_Chr3g0082701 23.605 233 154 6 236 448 262 490 7.80e-16 80.1
Msa0012720 MtrunA17_Chr4g0058211 35.032 157 89 5 283 434 16 164 9.45e-16 76.3
Msa0012720 MtrunA17_Chr4g0011851 28.902 173 114 4 288 455 14 182 1.04e-15 76.3
Msa0012720 MtrunA17_Chr3g0128461 28.899 218 134 7 239 445 279 486 1.05e-15 79.7
Msa0012720 MtrunA17_Chr1g0151221 24.609 512 287 26 11 452 13 495 1.10e-15 79.7
Msa0012720 MtrunA17_Chr4g0011901 23.111 450 289 18 41 452 30 460 1.14e-15 79.3
Msa0012720 MtrunA17_Chr3g0101741 27.064 218 143 6 242 448 175 387 1.23e-15 79.0
Msa0012720 MtrunA17_Chr7g0258221 21.364 440 286 14 40 437 34 455 1.55e-15 79.0
Msa0012720 MtrunA17_Chr6g0463791 21.286 451 313 13 29 448 24 463 1.73e-15 79.0
Msa0012720 MtrunA17_Chr4g0004601 23.611 432 267 16 69 461 102 509 1.75e-15 79.0
Msa0012720 MtrunA17_Chr4g0008101 25.912 274 166 10 238 480 265 532 1.78e-15 79.0
Msa0012720 MtrunA17_Chr4g0020041 27.016 248 136 9 241 448 224 466 2.17e-15 78.6
Msa0012720 MtrunA17_Chr3g0101711 23.077 481 285 19 40 466 37 486 2.44e-15 78.6
Msa0012720 MtrunA17_Chr8g0364081 24.506 253 163 7 237 463 273 523 2.81e-15 78.2
Msa0012720 MtrunA17_Chr4g0030701 23.060 451 296 13 35 445 30 469 3.30e-15 78.2
Msa0012720 MtrunA17_Chr6g0451771 27.624 181 116 5 283 452 15 191 3.40e-15 75.1
Msa0012720 MtrunA17_Chr1g0200961 22.991 448 290 17 41 448 29 461 4.06e-15 77.8
Msa0012720 MtrunA17_Chr7g0258211 26.961 204 128 4 249 437 264 461 4.10e-15 77.8
Msa0012720 MtrunA17_Chr4g0011921 24.521 522 321 26 9 483 1 496 4.82e-15 77.4
Msa0012720 MtrunA17_Chr3g0101811 23.517 472 284 18 38 454 35 484 5.05e-15 77.4
Msa0012720 MtrunA17_Chr7g0246131 21.784 482 318 16 9 453 10 469 6.09e-15 77.0
Msa0012720 MtrunA17_Chr1g0174431 28.846 156 96 3 293 437 4 155 7.22e-15 73.6
Msa0012720 MtrunA17_Chr4g0063221 29.167 168 110 3 283 445 318 481 7.46e-15 77.0
Msa0012720 MtrunA17_Chr4g0004481 21.171 444 313 12 45 457 29 466 1.02e-14 76.3
Msa0012720 MtrunA17_Chr3g0094171 26.126 222 144 7 238 445 251 466 1.25e-14 76.3
Msa0012720 MtrunA17_Chr5g0409051 26.050 238 151 7 237 453 243 476 1.29e-14 76.3
Msa0012720 MtrunA17_Chr5g0406651 22.555 501 291 20 28 468 18 481 1.53e-14 75.9
Msa0012720 MtrunA17_Chr7g0254641 22.472 445 280 16 40 437 37 463 1.89e-14 75.5
Msa0012720 MtrunA17_Chr8g0357431 23.160 462 288 17 32 448 27 466 2.13e-14 75.5
Msa0012720 MtrunA17_Chr2g0280121 27.570 214 145 5 248 452 264 476 2.64e-14 75.1
Msa0012720 MtrunA17_Chr1g0167321 21.522 460 301 16 30 448 24 464 2.75e-14 75.1
Msa0012720 MtrunA17_Chr1g0174471 25.108 231 151 7 257 471 288 512 2.90e-14 75.1
Msa0012720 MtrunA17_Chr0c19g0493771 24.883 213 147 4 249 455 414 619 3.27e-14 75.1
Msa0012720 MtrunA17_Chr3g0086651 32.864 213 126 6 238 437 247 455 4.03e-14 74.7
Msa0012720 MtrunA17_Chr8g0362701 26.344 186 124 3 261 437 275 456 4.14e-14 74.7
Msa0012720 MtrunA17_Chr4g0011941 29.762 168 107 6 291 452 2 164 4.52e-14 70.9
Msa0012720 MtrunA17_Chr4g0047641 21.353 473 312 17 17 448 27 480 4.81e-14 74.3
Msa0012720 MtrunA17_Chr4g0011881 22.424 495 327 21 28 482 18 495 4.85e-14 74.3
Msa0012720 MtrunA17_Chr6g0449381 26.991 226 157 4 248 465 262 487 5.45e-14 74.3
Msa0012720 MtrunA17_Chr7g0227281 22.004 459 306 14 47 468 33 476 6.20e-14 73.9
Msa0012720 MtrunA17_Chr3g0086661 32.394 213 127 6 238 437 247 455 6.92e-14 73.9
Msa0012720 MtrunA17_Chr5g0396521 26.141 241 135 7 250 455 309 541 8.07e-14 73.9
Msa0012720 MtrunA17_Chr1g0154731 24.528 318 213 10 150 454 171 474 1.23e-13 73.2
Msa0012720 MtrunA17_Chr4g0038271 26.389 216 138 5 259 457 323 534 1.26e-13 73.2
Msa0012720 MtrunA17_Chr7g0246121 26.383 235 152 8 229 453 242 465 1.34e-13 72.8
Msa0012720 MtrunA17_Chr7g0224551 22.468 316 210 8 177 463 168 477 1.34e-13 73.2
Msa0012720 MtrunA17_Chr2g0296651 25.822 213 149 4 247 458 259 463 1.66e-13 72.8
Msa0012720 MtrunA17_Chr8g0390871 29.310 174 106 5 284 448 25 190 2.57e-13 69.3
Msa0012720 MtrunA17_Chr4g0047691 20.628 446 311 15 17 433 29 460 3.25e-13 71.6
Msa0012720 MtrunA17_Chr4g0056951 24.201 219 149 6 239 445 255 468 3.98e-13 71.6
Msa0012720 MtrunA17_Chr5g0432751 20.950 463 310 14 32 454 25 471 4.18e-13 71.2
Msa0012720 MtrunA17_Chr7g0260831 22.464 414 253 15 87 454 80 471 4.35e-13 71.2
Msa0012720 MtrunA17_Chr2g0313771 25.967 181 124 3 280 455 320 495 4.61e-13 71.2
Msa0012720 MtrunA17_Chr5g0436981 31.132 106 70 2 37 141 25 128 5.20e-13 67.8
Msa0012720 MtrunA17_Chr4g0011981 27.004 237 157 8 258 482 263 495 6.15e-13 70.9
Msa0012720 MtrunA17_Chr1g0164321 25.455 220 148 5 254 457 302 521 8.13e-13 70.5
Msa0012720 MtrunA17_Chr2g0280081 24.464 233 162 6 234 452 238 470 9.63e-13 70.9
Msa0012720 MtrunA17_Chr6g0484811 20.399 451 297 17 41 448 38 469 1.17e-12 70.1
Msa0012720 MtrunA17_Chr1g0207841 21.429 364 245 11 136 463 131 489 1.20e-12 70.1
Msa0012720 MtrunA17_Chr8g0380501 22.707 458 304 17 47 466 29 474 1.54e-12 69.7
Msa0012720 MtrunA17_Chr7g0260821 21.700 447 296 14 46 454 42 472 1.56e-12 69.7
Msa0012720 MtrunA17_Chr1g0193811 21.901 484 323 17 9 452 17 485 1.74e-12 69.3
Msa0012720 MtrunA17_Chr4g0030711 24.412 340 214 10 136 437 130 464 1.83e-12 69.3
Msa0012720 MtrunA17_Chr1g0204271 24.375 320 185 13 167 444 162 466 2.15e-12 69.3
Msa0012720 MtrunA17_Chr2g0314781 29.762 168 105 5 309 467 4 167 4.24e-12 64.7
Msa0012720 MtrunA17_Chr1g0184421 26.178 191 118 7 262 441 282 460 4.60e-12 68.2
Msa0012720 MtrunA17_Chr8g0387001 25.316 237 158 7 240 461 251 483 5.52e-12 67.8
Msa0012720 MtrunA17_Chr8g0387101 26.486 185 127 4 277 452 288 472 5.92e-12 67.8
Msa0012720 MtrunA17_Chr2g0310351 27.778 180 107 7 286 454 1 168 6.19e-12 64.7
Msa0012720 MtrunA17_Chr2g0280061 25.281 178 125 3 283 452 1 178 7.37e-12 64.7
Msa0012720 MtrunA17_Chr3g0101661 23.581 458 274 22 40 448 38 468 7.60e-12 67.4
Msa0012720 MtrunA17_Chr3g0104351 24.710 259 173 9 214 454 233 487 8.10e-12 67.4
Msa0012720 MtrunA17_Chr8g0351401 28.151 238 146 8 245 460 254 488 1.12e-11 67.0
Msa0012720 MtrunA17_Chr6g0463561 33.962 106 62 4 42 143 40 141 1.57e-11 63.5
Msa0012720 MtrunA17_Chr7g0248991 26.772 127 88 1 285 411 230 351 1.90e-11 65.5
Msa0012720 MtrunA17_Chr4g0046661 28.324 173 107 5 288 448 23 190 2.08e-11 63.9
Msa0012720 MtrunA17_Chr2g0313791 23.245 413 272 18 67 448 82 480 2.70e-11 65.9
Msa0012720 MtrunA17_Chr6g0449341 26.087 253 155 8 243 466 302 551 2.87e-11 65.9
Msa0012720 MtrunA17_Chr6g0472311 22.465 503 318 20 17 476 21 494 6.49e-11 64.7
Msa0012720 MtrunA17_Chr4g0014051 22.430 428 267 16 68 452 96 501 7.94e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012720 AT2G32440.2 46.791 483 252 3 3 482 7 487 7.95e-167 480
Msa0012720 AT2G32440.1 46.791 483 252 3 3 482 7 487 7.95e-167 480
Msa0012720 AT1G05160.2 46.154 481 254 3 3 479 8 487 1.58e-164 474
Msa0012720 AT1G05160.1 46.154 481 254 3 3 479 8 487 1.58e-164 474
Msa0012720 AT3G19270.2 31.501 473 307 8 6 477 5 461 2.95e-73 239
Msa0012720 AT3G19270.1 31.849 449 289 8 6 453 5 437 1.02e-71 234
Msa0012720 AT4G19230.2 33.560 441 260 11 39 463 35 458 2.91e-70 232
Msa0012720 AT4G19230.1 33.410 437 273 9 39 474 35 454 7.14e-70 230
Msa0012720 AT5G45340.1 31.116 466 297 10 10 474 12 454 6.90e-68 225
Msa0012720 AT5G45340.2 31.416 452 286 10 10 460 12 440 1.65e-67 223
Msa0012720 AT1G73340.1 29.621 449 287 13 34 470 37 468 1.98e-65 219
Msa0012720 AT3G13730.2 29.976 417 286 5 40 453 51 464 2.08e-65 218
Msa0012720 AT4G36380.1 30.788 419 281 6 40 452 69 484 2.15e-65 220
Msa0012720 AT3G13730.1 29.976 417 286 5 40 453 51 464 2.55e-65 219
Msa0012720 AT1G12740.1 29.977 437 298 6 24 457 15 446 3.61e-64 215
Msa0012720 AT2G29090.2 29.630 459 308 9 26 482 37 482 1.72e-63 214
Msa0012720 AT2G29090.1 29.630 459 308 9 26 482 37 482 1.72e-63 214
Msa0012720 AT1G12740.2 29.797 443 297 7 24 457 15 452 2.20e-62 211
Msa0012720 AT5G05690.1 31.429 420 270 9 40 452 31 439 2.41e-62 211
Msa0012720 AT1G12740.4 29.571 443 298 7 24 457 15 452 7.26e-62 209
Msa0012720 AT3G50660.1 29.424 469 287 10 34 464 33 495 3.30e-60 206
Msa0012720 AT5G38970.1 28.637 433 291 10 32 460 26 444 7.70e-60 204
Msa0012720 AT5G36110.1 29.724 434 293 7 33 460 26 453 1.27e-59 203
Msa0012720 AT1G55940.2 26.552 467 330 10 1 458 7 469 9.30e-59 202
Msa0012720 AT1G55940.1 26.681 461 325 10 1 452 7 463 2.28e-58 200
Msa0012720 AT3G30180.1 28.139 462 312 10 1 460 1 444 3.64e-58 199
Msa0012720 AT1G19630.1 29.748 437 290 11 34 463 29 455 9.76e-58 198
Msa0012720 AT1G19630.3 29.466 431 287 11 34 457 29 449 8.39e-57 195
Msa0012720 AT5G14400.2 27.700 426 275 9 45 464 1 399 4.07e-53 185
Msa0012720 AT5G14400.3 27.885 416 267 9 45 454 1 389 6.44e-53 183
Msa0012720 AT1G78490.1 26.609 466 329 9 7 467 4 461 1.22e-52 185
Msa0012720 AT5G05690.2 31.117 376 244 8 40 411 31 395 4.94e-51 179
Msa0012720 AT2G29090.3 29.082 392 271 6 93 482 1 387 2.80e-50 176
Msa0012720 AT3G50660.2 29.736 417 258 10 34 424 33 440 1.34e-48 173
Msa0012720 AT5G38970.3 27.937 383 259 9 32 411 26 394 3.67e-48 171
Msa0012720 AT3G44970.1 25.793 473 324 11 8 468 5 462 1.52e-47 171
Msa0012720 AT2G42850.1 27.686 484 331 10 6 483 11 481 8.46e-46 166
Msa0012720 AT5G38970.2 26.703 367 262 6 96 460 2 363 8.09e-45 161
Msa0012720 AT5G38970.4 26.703 367 262 6 96 460 2 363 8.09e-45 161
Msa0012720 AT1G19630.2 27.979 386 262 10 34 412 29 405 1.23e-44 162
Msa0012720 AT4G15300.3 26.304 441 305 10 20 453 5 432 1.28e-43 160
Msa0012720 AT4G15300.2 26.304 441 305 10 20 453 15 442 1.42e-43 160
Msa0012720 AT5G05690.3 31.173 324 208 7 135 452 6 320 1.64e-43 157
Msa0012720 AT1G78490.2 26.161 409 292 7 7 412 4 405 1.57e-42 156
Msa0012720 AT1G65670.1 26.328 433 296 9 23 448 18 434 4.19e-42 156
Msa0012720 AT1G12740.3 29.132 357 247 5 24 379 15 366 6.57e-42 153
Msa0012720 AT5G48000.1 24.828 435 313 9 25 452 61 488 2.20e-41 155
Msa0012720 AT5G48000.2 25.287 435 311 10 25 452 20 447 2.32e-41 154
Msa0012720 AT5G48000.4 25.287 435 311 10 25 452 20 447 2.32e-41 154
Msa0012720 AT5G48000.7 25.287 435 311 10 25 452 20 447 2.32e-41 154
Msa0012720 AT5G48000.6 25.287 435 311 10 25 452 20 447 2.32e-41 154
Msa0012720 AT5G48000.5 25.287 435 311 10 25 452 20 447 2.32e-41 154
Msa0012720 AT5G48000.3 25.287 435 311 10 25 452 20 447 2.32e-41 154
Msa0012720 AT5G36110.2 28.889 360 244 7 33 386 26 379 2.75e-39 147
Msa0012720 AT4G15300.1 24.946 461 308 11 20 453 5 454 5.57e-38 145
Msa0012720 AT5G14400.1 26.630 368 239 8 103 464 3 345 5.84e-38 142
Msa0012720 AT4G36380.2 27.273 341 242 5 40 377 69 406 1.18e-37 143
Msa0012720 AT4G15310.1 24.594 431 312 10 23 448 19 441 1.07e-36 141
Msa0012720 AT5G36140.1 27.211 294 210 4 27 319 19 309 3.56e-33 128
Msa0012720 AT4G15393.2 24.036 441 308 14 23 453 18 441 9.22e-31 124
Msa0012720 AT3G30290.1 23.797 374 268 8 82 448 5 368 1.21e-30 123
Msa0012720 AT4G15396.3 22.222 414 308 9 40 448 35 439 1.20e-29 121
Msa0012720 AT4G15396.1 22.222 414 308 9 40 448 35 439 1.73e-29 121
Msa0012720 AT2G28860.1 23.760 484 302 22 28 475 29 481 4.31e-29 120
Msa0012720 AT2G42850.2 26.289 388 269 10 6 386 11 388 5.36e-29 118
Msa0012720 AT5G14400.4 25.369 339 238 8 45 377 1 330 8.72e-29 116
Msa0012720 AT2G28850.1 23.347 484 304 21 28 475 29 481 2.86e-28 117
Msa0012720 AT5G04630.1 24.597 496 317 19 5 463 10 485 2.26e-25 109
Msa0012720 AT2G34490.1 24.396 455 303 18 48 475 45 485 3.60e-25 108
Msa0012720 AT2G45550.1 24.843 479 299 17 15 452 13 471 5.54e-25 108
Msa0012720 AT2G29090.4 27.551 294 199 8 26 317 37 318 1.35e-24 105
Msa0012720 AT2G34500.1 22.272 449 315 14 48 475 45 480 1.47e-24 107
Msa0012720 AT5G57220.1 23.060 464 300 16 38 468 28 467 1.67e-23 103
Msa0012720 AT3G10560.1 24.161 447 293 15 40 453 46 479 1.82e-23 103
Msa0012720 AT2G45560.1 22.689 476 319 15 12 452 10 471 7.55e-23 102
Msa0012720 AT4G15396.2 21.014 414 292 9 40 448 35 418 1.27e-22 100
Msa0012720 AT5G36130.1 34.286 140 91 1 345 483 1 140 1.46e-22 94.0
Msa0012720 AT1G66540.2 27.149 221 154 4 239 458 75 289 1.70e-22 98.6
Msa0012720 AT4G15393.1 23.485 396 280 12 23 411 18 397 4.25e-22 98.6
Msa0012720 AT1G13110.1 21.776 473 322 14 12 449 5 464 4.29e-22 99.8
Msa0012720 AT1G66540.1 26.906 223 156 4 239 460 134 350 4.38e-22 98.2
Msa0012720 AT3G26180.1 23.579 475 315 15 15 454 8 469 6.17e-22 99.0
Msa0012720 AT4G12300.1 22.198 455 299 15 34 448 36 475 8.60e-22 98.6
Msa0012720 AT3G26170.1 23.077 481 320 16 11 454 2 469 2.36e-21 97.4
Msa0012720 AT3G28740.1 27.273 220 152 4 239 457 256 468 2.56e-21 97.4
Msa0012720 AT4G12320.1 22.629 464 300 18 27 448 31 477 2.66e-21 97.4
Msa0012720 AT4G15396.4 20.856 374 285 7 40 411 35 399 4.69e-21 95.5
Msa0012720 AT3G26270.1 21.795 468 306 15 29 454 21 470 6.12e-21 95.9
Msa0012720 AT4G37410.1 22.892 415 266 14 81 458 65 462 1.17e-20 95.1
Msa0012720 AT3G20940.1 22.146 438 299 11 40 445 42 469 1.25e-20 95.1
Msa0012720 AT3G26280.1 22.609 460 301 15 29 449 21 464 1.78e-20 94.7
Msa0012720 AT5G25120.1 22.934 484 306 17 6 452 4 457 1.90e-20 94.4
Msa0012720 AT3G26310.1 24.107 448 287 17 37 448 30 460 2.04e-20 94.4
Msa0012720 AT3G26280.2 22.609 460 301 15 29 449 38 481 2.21e-20 94.4
Msa0012720 AT4G37400.1 21.212 429 288 13 69 461 51 465 3.91e-20 93.6
Msa0012720 AT3G26330.1 24.208 442 289 17 41 448 32 461 4.66e-20 93.2
Msa0012720 AT4G37370.1 25.692 253 172 7 239 482 247 492 5.04e-20 93.2
Msa0012720 AT4G36220.1 22.538 457 273 16 47 449 47 476 6.00e-20 93.2
Msa0012720 AT4G31970.1 28.755 233 149 5 249 469 272 499 6.64e-20 93.2
Msa0012720 AT2G45570.1 23.821 403 263 15 87 452 77 472 7.16e-20 92.8
Msa0012720 AT4G37340.1 26.009 223 158 4 239 460 247 463 8.79e-20 92.4
Msa0012720 AT3G48300.1 23.904 456 299 16 36 464 28 462 1.00e-19 92.4
Msa0012720 AT3G48300.2 23.904 456 299 16 36 464 30 464 1.01e-19 92.4
Msa0012720 AT3G26180.2 28.632 234 151 6 234 454 105 335 1.23e-19 90.9
Msa0012720 AT2G40890.1 23.312 459 292 18 33 449 20 460 1.35e-19 92.0
Msa0012720 AT4G37430.1 23.799 458 294 19 37 457 25 464 1.83e-19 91.7
Msa0012720 AT4G13770.1 24.947 473 294 21 27 458 17 469 3.44e-19 90.9
Msa0012720 AT4G31940.1 27.897 233 151 5 249 469 273 500 3.53e-19 90.9
Msa0012720 AT5G36220.1 22.757 457 293 20 40 458 33 467 4.31e-19 90.5
Msa0012720 AT3G61040.1 27.917 240 162 5 229 462 236 470 6.31e-19 89.7
Msa0012720 AT5G06900.1 22.091 507 335 19 1 471 2 484 7.21e-19 89.7
Msa0012720 AT4G37320.1 25.000 252 170 7 239 480 248 490 9.19e-19 89.4
Msa0012720 AT4G37310.1 23.951 405 264 15 103 471 96 492 9.22e-19 89.4
Msa0012720 AT3G48270.1 24.615 455 267 18 39 452 33 452 1.08e-18 89.0
Msa0012720 AT5G04330.1 22.788 452 291 12 39 449 31 465 1.11e-18 89.4
Msa0012720 AT5G67310.1 22.687 454 293 15 40 458 42 472 1.13e-18 89.4
Msa0012720 AT1G33730.1 28.319 226 147 5 239 453 115 336 1.45e-18 87.8
Msa0012720 AT1G33730.2 28.319 226 147 5 239 453 115 336 1.45e-18 87.8
Msa0012720 AT4G31950.1 28.755 233 149 6 249 469 261 488 1.51e-18 89.0
Msa0012720 AT4G37360.1 25.446 224 154 5 263 478 270 488 2.38e-18 88.2
Msa0012720 AT5G35715.1 28.910 211 138 4 236 437 178 385 3.03e-18 87.4
Msa0012720 AT2G23190.1 27.234 235 158 7 230 460 282 507 4.10e-18 87.4
Msa0012720 AT5G07990.1 24.194 434 278 15 40 437 33 451 4.78e-18 87.4
Msa0012720 AT5G36220.2 25.225 222 158 4 238 458 107 321 5.40e-18 85.9
Msa0012720 AT1G33720.1 25.000 452 282 18 41 453 39 472 5.99e-18 87.0
Msa0012720 AT3G26290.1 24.283 453 288 19 32 448 28 461 8.04e-18 86.7
Msa0012720 AT1G11610.1 23.462 439 293 15 40 449 33 457 9.52e-18 86.3
Msa0012720 AT1G13080.1 21.218 476 319 17 12 449 5 462 1.01e-17 86.3
Msa0012720 AT1G11610.2 23.462 439 293 15 40 449 33 457 1.09e-17 86.3
Msa0012720 AT2G23220.1 25.112 223 159 4 239 460 263 478 1.10e-17 86.3
Msa0012720 AT1G11680.1 27.935 247 159 6 225 459 222 461 1.17e-17 85.9
Msa0012720 AT3G26290.2 24.283 453 288 19 32 448 41 474 1.28e-17 85.9
Msa0012720 AT3G53300.1 23.380 432 285 12 40 437 28 447 1.31e-17 85.9
Msa0012720 AT2G26710.1 23.044 473 300 18 22 451 36 487 1.38e-17 85.9
Msa0012720 AT3G26150.1 22.993 461 309 15 11 437 2 450 1.72e-17 85.5
Msa0012720 AT1G13080.2 24.127 315 209 10 161 449 34 344 1.90e-17 84.3
Msa0012720 AT2G45580.2 25.103 243 166 4 232 462 90 328 1.92e-17 84.3
Msa0012720 AT3G20950.1 22.826 368 241 9 126 458 130 489 2.67e-17 85.1
Msa0012720 AT4G37330.1 26.009 223 157 4 239 460 245 460 4.50e-17 84.3
Msa0012720 AT2G45580.1 25.103 243 166 4 232 462 244 482 5.02e-17 84.0
Msa0012720 AT2G25160.1 21.684 475 303 18 32 456 28 483 5.10e-17 84.0
Msa0012720 AT1G13090.2 23.303 442 278 16 33 433 21 442 7.18e-17 83.6
Msa0012720 AT5G44620.1 27.111 225 146 7 238 448 258 478 8.45e-17 83.6
Msa0012720 AT2G30750.1 24.368 435 284 16 40 443 33 453 1.02e-16 83.2
Msa0012720 AT5G47990.1 25.670 261 171 8 216 458 230 485 1.64e-16 82.4
Msa0012720 AT2G30770.1 24.766 428 277 17 40 437 33 445 1.64e-16 82.4
Msa0012720 AT3G26830.1 21.087 460 298 14 33 449 21 458 1.77e-16 82.4
Msa0012720 AT3G26300.1 22.247 454 307 14 29 448 20 461 1.80e-16 82.4
Msa0012720 AT3G26160.1 23.465 456 305 15 11 433 2 446 1.84e-16 82.4
Msa0012720 AT1G13100.1 25.000 332 214 9 133 433 115 442 3.32e-16 81.6
Msa0012720 AT3G26200.1 22.299 435 294 11 32 433 20 443 4.76e-16 80.9
Msa0012720 AT3G26210.1 24.138 348 226 12 133 449 121 461 5.22e-16 80.9
Msa0012720 AT3G25180.1 25.764 229 153 7 253 469 266 489 5.73e-16 80.9
Msa0012720 AT5G25130.1 22.958 453 299 14 33 452 22 457 6.54e-16 80.5
Msa0012720 AT1G50520.1 26.087 230 135 4 239 437 238 463 8.80e-16 80.5
Msa0012720 AT4G22710.1 24.163 418 262 18 72 448 81 484 1.21e-15 79.7
Msa0012720 AT5G25140.1 22.149 456 297 16 34 452 23 457 1.37e-15 79.7
Msa0012720 AT5G23190.1 21.681 452 313 12 47 458 65 515 1.43e-15 79.7
Msa0012720 AT3G26190.1 22.864 433 278 14 40 433 28 443 1.92e-15 79.0
Msa0012720 AT5G04660.1 24.800 250 167 7 221 453 233 478 2.30e-15 79.0
Msa0012720 AT3G20935.1 27.957 186 117 3 286 458 130 311 3.17e-15 77.4
Msa0012720 AT3G10570.1 25.000 232 154 7 247 463 263 489 3.60e-15 78.2
Msa0012720 AT4G32170.1 26.728 217 144 7 250 455 263 475 3.82e-15 78.2
Msa0012720 AT1G33720.4 26.129 310 195 11 168 453 41 340 4.37e-15 77.4
Msa0012720 AT1G33720.3 26.129 310 195 11 168 453 41 340 4.37e-15 77.4
Msa0012720 AT1G33720.5 26.129 310 195 11 168 453 41 340 4.37e-15 77.4
Msa0012720 AT2G27690.1 24.895 237 165 6 240 469 247 477 6.05e-15 77.4
Msa0012720 AT4G15330.1 20.432 509 336 15 12 472 17 504 6.52e-15 77.4
Msa0012720 AT5G06905.1 21.649 485 305 19 10 443 6 466 9.48e-15 77.0
Msa0012720 AT2G26170.1 22.777 461 287 16 42 452 47 488 9.76e-15 77.0
Msa0012720 AT1G50560.1 25.214 234 159 5 238 460 258 486 9.95e-15 77.0
Msa0012720 AT3G26220.1 30.275 218 137 7 255 460 262 476 1.11e-14 76.6
Msa0012720 AT3G61880.1 27.232 224 142 7 239 448 279 495 1.20e-14 76.6
Msa0012720 AT2G21910.1 27.136 199 133 6 268 457 285 480 1.29e-14 76.6
Msa0012720 AT3G61880.2 27.232 224 142 7 239 448 279 495 1.75e-14 76.3
Msa0012720 AT3G26230.1 26.601 203 134 6 259 448 263 463 1.79e-14 76.3
Msa0012720 AT5G08250.1 20.899 445 314 12 47 454 4 447 1.85e-14 75.9
Msa0012720 AT2G23180.1 24.201 219 152 5 253 457 268 486 2.16e-14 75.9
Msa0012720 AT5G24900.2 26.415 212 134 9 248 445 169 372 2.59e-14 75.1
Msa0012720 AT4G22690.1 23.909 481 296 20 9 448 64 515 2.68e-14 75.9
Msa0012720 AT4G15330.2 23.574 263 173 5 234 472 218 476 2.84e-14 75.5
Msa0012720 AT5G24900.1 26.415 212 134 9 248 445 286 489 3.25e-14 75.5
Msa0012720 AT5G08250.2 21.064 451 315 13 44 454 60 509 3.98e-14 75.1
Msa0012720 AT5G24910.1 25.081 307 183 11 178 445 196 494 5.14e-14 74.7
Msa0012720 AT3G32047.1 21.935 465 284 17 65 475 63 502 5.19e-14 74.7
Msa0012720 AT1G63710.1 22.678 463 294 16 43 454 29 478 6.45e-14 74.3
Msa0012720 AT3G44970.2 20.166 362 266 8 8 360 5 352 6.52e-14 73.6
Msa0012720 AT1G28430.1 22.143 420 264 15 86 458 80 483 8.53e-14 73.9
Msa0012720 AT3G14620.1 28.319 226 150 7 237 455 267 487 9.03e-14 73.9
Msa0012720 AT2G24180.1 24.107 224 153 6 238 448 248 467 9.43e-14 73.9
Msa0012720 AT5G52400.1 24.107 224 154 6 239 454 275 490 1.17e-13 73.6
Msa0012720 AT4G39490.1 27.149 221 140 7 257 457 271 490 1.20e-13 73.6
Msa0012720 AT3G20110.1 24.670 227 159 4 242 460 255 477 1.22e-13 73.6
Msa0012720 AT4G12330.1 21.277 423 287 14 64 448 63 477 1.27e-13 73.6
Msa0012720 AT1G47620.1 27.230 213 143 6 256 458 280 490 1.28e-13 73.6
Msa0012720 AT2G46660.1 21.622 444 291 15 42 448 72 495 1.60e-13 73.2
Msa0012720 AT4G15360.1 24.359 234 159 5 239 458 253 482 2.09e-13 72.8
Msa0012720 AT4G12310.1 25.714 245 154 9 224 448 243 479 2.78e-13 72.4
Msa0012720 AT2G42250.1 25.128 195 128 4 257 437 272 462 4.51e-13 71.6
Msa0012720 AT3G20140.1 19.703 472 320 14 27 458 29 481 7.59e-13 70.9
Msa0012720 AT5G02900.1 25.743 202 137 6 278 469 266 464 8.44e-13 70.9
Msa0012720 AT1G31800.1 25.000 184 126 4 285 462 369 546 8.70e-13 71.2
Msa0012720 AT1G24540.1 22.294 462 305 17 43 458 42 495 1.21e-12 70.5
Msa0012720 AT2G26170.2 26.009 223 151 5 239 452 188 405 1.29e-12 70.1
Msa0012720 AT1G75130.1 23.843 432 278 17 61 460 67 479 1.42e-12 70.1
Msa0012720 AT3G53130.1 27.273 187 123 5 285 464 339 519 2.10e-12 69.7
Msa0012720 AT1G01190.2 24.153 236 154 7 239 460 290 514 2.55e-12 69.3
Msa0012720 AT1G01190.1 24.153 236 154 7 239 460 285 509 2.55e-12 69.3
Msa0012720 AT1G64940.1 24.444 225 154 5 247 458 260 481 3.04e-12 69.3
Msa0012720 AT3G48520.1 25.000 216 138 5 260 463 276 479 3.89e-12 68.9
Msa0012720 AT4G15110.1 21.319 455 275 14 80 461 112 556 4.18e-12 68.9
Msa0012720 AT1G64950.1 25.333 225 152 5 247 458 259 480 4.28e-12 68.6
Msa0012720 AT2G12190.1 25.551 227 151 5 247 458 259 482 6.98e-12 68.2
Msa0012720 AT3G53280.1 21.330 436 295 14 32 433 20 441 7.09e-12 67.8
Msa0012720 AT5G24960.1 23.214 448 298 19 40 455 33 466 2.19e-11 66.2
Msa0012720 AT3G20080.2 19.874 478 317 14 27 458 29 486 3.72e-11 65.9
Msa0012720 AT3G20080.1 19.874 478 317 14 27 458 29 486 3.72e-11 65.9
Msa0012720 AT1G13150.1 20.950 463 311 17 43 458 38 492 3.76e-11 65.9
Msa0012720 AT3G14680.1 23.849 239 164 7 223 448 248 481 3.92e-11 65.9
Msa0012720 AT5G05260.1 20.000 445 296 13 40 452 40 456 5.61e-11 65.1
Msa0012720 AT1G13140.1 21.654 254 179 6 222 455 243 496 6.20e-11 65.1
Msa0012720 AT5G38450.1 28.191 188 127 4 283 466 318 501 7.52e-11 64.7

Find 129 sgRNAs with CRISPR-Local

Find 500 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACGATAGGTTGAAATAATT+TGG 0.109436 1_1:+19383923 None:intergenic
CAACACATCATTACTAAAAT+AGG 0.127293 1_1:-19384168 Msa0012720:CDS
ATCACTTCCATAGTGGATTT+TGG 0.133399 1_1:+19384426 None:intergenic
AATATCGATGATTACTTTAA+AGG 0.142531 1_1:+19384209 None:intergenic
ACATTACCAGGAGTCCTTTA+TGG 0.179185 1_1:+19384079 None:intergenic
GTTGGGACCTTCCTTTCTTT+TGG 0.202592 1_1:-19378883 Msa0012720:CDS
TGATGAGATGTAAATTCTTT+TGG 0.243236 1_1:-19384407 Msa0012720:CDS
AGACATTGTGATCAATTCTT+TGG 0.249443 1_1:-19384289 Msa0012720:CDS
AGATTTGCTTGATAATATTC+TGG 0.260832 1_1:-19383862 Msa0012720:CDS
GTAATCATCGATATTCTTAT+AGG 0.263526 1_1:-19384201 Msa0012720:CDS
CCCACTGCCTCCTGGTCATA+TGG 0.279492 1_1:-19385125 Msa0012720:CDS
TCTATGCCCATTAACCTTCC+TGG 0.289148 1_1:-19384111 Msa0012720:CDS
CTTAGCAAGGCAATTGTCTC+TGG 0.291577 1_1:+19378396 None:intergenic
CATATGGGATGGCCACTTAT+TGG 0.306076 1_1:-19385109 Msa0012720:CDS
TTGCCTTGCTAAGGTGATAA+AGG 0.308770 1_1:-19378386 Msa0012720:CDS
ATCTACAAGTCACACTTGTT+TGG 0.309127 1_1:-19384528 Msa0012720:CDS
CAAAGATGGAAATACAATAC+TGG 0.309840 1_1:-19385243 Msa0012720:exon
TCATCAACAACCTTGTTTCC+AGG 0.333764 1_1:-19385036 Msa0012720:intron
TCATTCTCATCTTAGATAGA+TGG 0.340525 1_1:-19385535 Msa0012720:five_prime_UTR
AGCAAAACCAGGAAGGTTAA+TGG 0.340683 1_1:+19384104 None:intergenic
TGGAAATACAATACTGGGTT+TGG 0.348201 1_1:-19385237 Msa0012720:CDS
GGTGATGGTAAGCTAGTAAT+AGG 0.349881 1_1:+19378424 None:intergenic
TCCTACATATTATCCGAATT+CGG 0.354679 1_1:-19379502 Msa0012720:CDS
AAAAGAGATGTTACCATCAA+TGG 0.359714 1_1:-19379681 Msa0012720:intron
TTTGTTAAAGATTTCTCATC+AGG 0.361995 1_1:-19385073 Msa0012720:CDS
AGGCAATTGTCTCTGGGCTT+TGG 0.371507 1_1:+19378403 None:intergenic
AACACATCATTACTAAAATA+GGG 0.393685 1_1:-19384167 Msa0012720:CDS
GGGTTAAATTCACCCGAATT+CGG 0.393844 1_1:+19379489 None:intergenic
CAACTTACATCCCATCTTGA+TGG 0.394210 1_1:+19379468 None:intergenic
GGTAACACTTTCCATCCTTT+CGG 0.403942 1_1:+19379549 None:intergenic
GAATAGCCACAAACCATTGA+TGG 0.407577 1_1:+19379668 None:intergenic
TCTACAAGTCACACTTGTTT+GGG 0.413311 1_1:-19384527 Msa0012720:CDS
GCAAAACCAGGAAGGTTAAT+GGG 0.415270 1_1:+19384105 None:intergenic
TGCTTTCCATAAAGGACTCC+TGG 0.418652 1_1:-19384085 Msa0012720:intron
GACATTATTGACATGTTGAT+AGG 0.419087 1_1:-19383801 Msa0012720:CDS
CAATGTCTTCCATACGAGTT+AGG 0.419997 1_1:+19384304 None:intergenic
CGTTCAAAATATATAAGACT+TGG 0.421263 1_1:-19378243 Msa0012720:three_prime_UTR
CCTACATATTATCCGAATTC+GGG 0.426768 1_1:-19379501 Msa0012720:CDS
TCTTAATGAGATTAAACAAA+TGG 0.427145 1_1:-19380237 Msa0012720:CDS
CGGTTATCCAAAATCCACTA+TGG 0.432167 1_1:-19384433 Msa0012720:CDS
GATATCTATTATATCTTATG+AGG 0.439312 1_1:+19378168 None:intergenic
CATTGTGATCAATTCTTTGG+AGG 0.452272 1_1:-19384286 Msa0012720:CDS
AGAAAGGAAGGTCCCAACTT+TGG 0.462167 1_1:+19378888 None:intergenic
CCACTGCCTCCTGGTCATAT+GGG 0.462987 1_1:-19385124 Msa0012720:CDS
ACATCTCATCACTTCCATAG+TGG 0.468733 1_1:+19384419 None:intergenic
TTGTCTCTGGGCTTTGGTGA+TGG 0.469088 1_1:+19378409 None:intergenic
CCAACTCTGACACAAGATCA+AGG 0.470450 1_1:-19385381 Msa0012720:five_prime_UTR
AAATTTGTTGCAGAAGGAGC+AGG 0.476870 1_1:-19380303 Msa0012720:intron
CCCATATGACCAGGAGGCAG+TGG 0.477667 1_1:+19385124 None:intergenic
AAGCTAGTAATAGGACAGTC+TGG 0.478065 1_1:+19378433 None:intergenic
CAGGATCACAATGCCAAAGT+TGG 0.481651 1_1:-19378901 Msa0012720:CDS
TTCAACCTATCGTAGAAGAA+AGG 0.481735 1_1:-19383914 Msa0012720:CDS
CCACATCATACCGGTTGCTA+TGG 0.486100 1_1:+19383755 None:intergenic
TAGTTGTTTGTTTCATCACT+TGG 0.486612 1_1:-19378352 Msa0012720:three_prime_UTR
GCAGGAAGTATGTATTGTCC+TGG 0.486991 1_1:-19378859 Msa0012720:CDS
TTGCTTATTATATATAGCCT+TGG 0.493311 1_1:+19385295 None:intergenic
AAGGAAATGATGTAGAAATA+CGG 0.500913 1_1:+19378810 None:intergenic
AGCACTATAAATTTCAGTAA+AGG 0.502128 1_1:+19384140 None:intergenic
AATCAAAGAAAGATTAAGAA+TGG 0.503890 1_1:+19385563 None:intergenic
TCAATAATGTCCTCATCCTC+AGG 0.505576 1_1:+19383813 None:intergenic
TAATATTCTGGAATTGAAAG+AGG 0.506223 1_1:-19383850 Msa0012720:CDS
GCATCACAAATGATGATGCT+TGG 0.509852 1_1:+19384501 None:intergenic
ATATTCAATTAATTCAAAGA+TGG 0.511278 1_1:-19385257 Msa0012720:exon
GGTCATGAAGCCATAGCAAC+CGG 0.511335 1_1:-19383765 Msa0012720:CDS
TACTTCCTGCTCCAAAAGAA+AGG 0.512941 1_1:+19378872 None:intergenic
TGCCTCCTGGTCATATGGGA+TGG 0.514622 1_1:-19385120 Msa0012720:CDS
ATTATATATAGCCTTGGAAG+TGG 0.514903 1_1:+19385301 None:intergenic
GTTATATAATACCGAAAGGA+TGG 0.516884 1_1:-19379560 Msa0012720:CDS
TTCTAATGTATTGTGGCCCA+TGG 0.517816 1_1:+19384332 None:intergenic
AAACTCACTTGTAATTAAGA+AGG 0.520375 1_1:+19378791 None:intergenic
GGTACATTTCTAATGTATTG+TGG 0.520826 1_1:+19384325 None:intergenic
GTCAACATATTGCCAATAAG+TGG 0.525688 1_1:+19385097 None:intergenic
GTGAATTTAACCCATCAAGA+TGG 0.526651 1_1:-19379479 Msa0012720:CDS
AGGTTGTTGATGAATGAATC+AGG 0.528148 1_1:+19385046 None:intergenic
TGATGAGAAATCTTTAACAA+AGG 0.530390 1_1:+19385075 None:intergenic
ATACAATACCCACTGCCTCC+TGG 0.533046 1_1:-19385133 Msa0012720:CDS
TGAATTTAACCCATCAAGAT+GGG 0.535394 1_1:-19379478 Msa0012720:CDS
AACTTACATCCCATCTTGAT+GGG 0.538803 1_1:+19379469 None:intergenic
AGGATCACAATGCCAAAGTT+GGG 0.540082 1_1:-19378900 Msa0012720:CDS
CCTTGATCTTGTGTCAGAGT+TGG 0.545963 1_1:+19385381 None:intergenic
TTAGCAAGGCAATTGTCTCT+GGG 0.548649 1_1:+19378397 None:intergenic
AACCTCCTTTCTTCTACGAT+AGG 0.549585 1_1:+19383909 None:intergenic
CGGTTGGAAACCTGAGGATG+AGG 0.556295 1_1:-19383823 Msa0012720:CDS
GCTGCAACAACATGAAAAGA+AGG 0.556942 1_1:+19385629 None:intergenic
CAGAGACAATTGCCTTGCTA+AGG 0.559969 1_1:-19378395 Msa0012720:CDS
CCATAGCAACCGGTATGATG+TGG 0.564942 1_1:-19383755 Msa0012720:CDS
GGAAATCATGAAGAGAAGAA+TGG 0.565068 1_1:-19380279 Msa0012720:CDS
TCCTGCTCCAAAAGAAAGGA+AGG 0.565172 1_1:+19378876 None:intergenic
ATGAAAGAGACCTGGAAACA+AGG 0.566057 1_1:+19385026 None:intergenic
AGAAATGTACCTAACTCGTA+TGG 0.566605 1_1:-19384313 Msa0012720:CDS
AAAGATGGAAATACAATACT+GGG 0.567203 1_1:-19385242 Msa0012720:exon
TTAATCTCAGTTCTTACCAT+GGG 0.569659 1_1:-19384348 Msa0012720:CDS
AAGGATGGAAAGTGTTACCT+TGG 0.572454 1_1:-19379545 Msa0012720:CDS
TATAATTGCCCACATCATAC+CGG 0.575320 1_1:+19383746 None:intergenic
TCTTCAACGTCCCACTTCCA+AGG 0.580992 1_1:-19385312 Msa0012720:five_prime_UTR
TCAGGTTATATAATACCGAA+AGG 0.581229 1_1:-19379564 Msa0012720:intron
AAACCTTTATCACCTTAGCA+AGG 0.581753 1_1:+19378383 None:intergenic
CCCGAATTCGGATAATATGT+AGG 0.585738 1_1:+19379501 None:intergenic
ATCTTGTGTCAGAGTTGGTG+AGG 0.587639 1_1:+19385386 None:intergenic
TTGGAAGTGGGACGTTGAAG+AGG 0.587971 1_1:+19385314 None:intergenic
CAACTCTGACACAAGATCAA+GGG 0.589535 1_1:-19385380 Msa0012720:five_prime_UTR
CAGAGTTGGTGAGGATGAGA+TGG 0.590988 1_1:+19385395 None:intergenic
AATTGAAAGAGGAAGACGGT+TGG 0.591885 1_1:-19383839 Msa0012720:CDS
TTTCATGTTGTTGCAGCATG+TGG 0.592384 1_1:-19385623 Msa0012720:five_prime_UTR
AACTCTGACACAAGATCAAG+GGG 0.594075 1_1:-19385379 Msa0012720:five_prime_UTR
CAGGAAGTATGTATTGTCCT+GGG 0.596939 1_1:-19378858 Msa0012720:CDS
TTATATATAGCCTTGGAAGT+GGG 0.602850 1_1:+19385302 None:intergenic
CCTTTATGGAAAGCAAAACC+AGG 0.605116 1_1:+19384093 None:intergenic
CTTAATCTCAGTTCTTACCA+TGG 0.610386 1_1:-19384349 Msa0012720:CDS
TATGGAAAGCAAAACCAGGA+AGG 0.610935 1_1:+19384097 None:intergenic
AACCTATCGTAGAAGAAAGG+AGG 0.614560 1_1:-19383911 Msa0012720:CDS
CATAGCAACCGGTATGATGT+GGG 0.614769 1_1:-19383754 Msa0012720:CDS
AGTGGCCATCCCATATGACC+AGG 0.618868 1_1:+19385115 None:intergenic
TGGAAGTGGGACGTTGAAGA+GGG 0.619433 1_1:+19385315 None:intergenic
TTATGAGGAGATTAACTGAG+TGG 0.626660 1_1:-19385180 Msa0012720:CDS
CTGGAATTGAAAGAGGAAGA+CGG 0.629590 1_1:-19383843 Msa0012720:CDS
GTATTGTCCTGGGAGTGACT+TGG 0.632968 1_1:-19378848 Msa0012720:CDS
TTTGTTGCAGAAGGAGCAGG+AGG 0.634319 1_1:-19380300 Msa0012720:intron
CCATATGACCAGGAGGCAGT+GGG 0.638047 1_1:+19385125 None:intergenic
GAAGAAAAGATAATATTACA+AGG 0.647074 1_1:-19385598 Msa0012720:five_prime_UTR
TTGCGAAGTTTATACTCACA+AGG 0.656668 1_1:+19379718 None:intergenic
GGAAGACGGTTGGAAACCTG+AGG 0.676566 1_1:-19383829 Msa0012720:CDS
ATGTGAATAGCTCTTAACCA+AGG 0.680773 1_1:+19379528 None:intergenic
GGCCATCCCATATGACCAGG+AGG 0.682350 1_1:+19385118 None:intergenic
TTTGTGATGCTGATATGTGT+AGG 0.683244 1_1:-19384488 Msa0012720:CDS
TTGGTTAAGAGCTATTCACA+TGG 0.683703 1_1:-19379526 Msa0012720:CDS
TGTTGATGAATGAATCAGGA+TGG 0.721070 1_1:+19385050 None:intergenic
ATCTAGTATGAATCACCCAG+TGG 0.732203 1_1:-19384259 Msa0012720:CDS
ACTCTGACACAAGATCAAGG+GGG 0.865783 1_1:-19385378 Msa0012720:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATATAAAAAAATAT+AGG + chr1_1:19384907-19384926 None:intergenic 0.0%
!!! TATTTTTTTATATTATTATA+TGG - chr1_1:19384908-19384927 Msa0012720:intron 0.0%
!!! TTTTATATTTAATTTAGTGT+CGG + chr1_1:19380720-19380739 None:intergenic 10.0%
!!! CTATTTTGAATAAATTATTT+TGG + chr1_1:19382921-19382940 None:intergenic 10.0%
!! TAATATACAAAATATTGTTA+TGG + chr1_1:19383000-19383019 None:intergenic 10.0%
!!! AATGATATACAATTTTTTTT+TGG + chr1_1:19383029-19383048 None:intergenic 10.0%
!! TAACTAAATACTAATTTAAT+TGG + chr1_1:19384618-19384637 None:intergenic 10.0%
!!! TATAAAATTACTTTTAACTA+TGG - chr1_1:19384636-19384655 Msa0012720:intron 10.0%
!!! ATTTAATTTTGAAAGATATA+CGG - chr1_1:19384727-19384746 Msa0012720:intron 10.0%
!!! ATATTTATTTTTCTTTTGAA+AGG - chr1_1:19385277-19385296 Msa0012720:five_prime_UTR 10.0%
!!! TTTTTTCATTTGTTAAGTTT+TGG - chr1_1:19378371-19378390 Msa0012720:exon 15.0%
!! ATATTCAATTAATTCAAAGA+TGG - chr1_1:19378576-19378595 Msa0012720:intron 15.0%
!! AAATTAAGTTTACATTATGT+AGG - chr1_1:19380151-19380170 Msa0012720:intron 15.0%
!!! AGTGTTAATATAATTCATTT+TGG + chr1_1:19380256-19380275 None:intergenic 15.0%
!! TTTATATCTATAATTGATAG+TGG - chr1_1:19380455-19380474 Msa0012720:intron 15.0%
!!! TTATATCTATAATTGATAGT+GGG - chr1_1:19380456-19380475 Msa0012720:intron 15.0%
!! TATGAGAAAAATTATGAAAT+GGG - chr1_1:19381193-19381212 Msa0012720:intron 15.0%
!!! AATTTAGTCTTTTAACAAAA+AGG + chr1_1:19381553-19381572 None:intergenic 15.0%
!!! TATTAGAAAAAATCTTTTGA+TGG - chr1_1:19381598-19381617 Msa0012720:intron 15.0%
!!! ATTAGAAAAAATCTTTTGAT+GGG - chr1_1:19381599-19381618 Msa0012720:intron 15.0%
!!! TTTGAATAAATTATTTTGGA+GGG + chr1_1:19382917-19382936 None:intergenic 15.0%
!!! TTTTGAATAAATTATTTTGG+AGG + chr1_1:19382918-19382937 None:intergenic 15.0%
!! AAGTCAATATATTAATCATA+TGG + chr1_1:19383686-19383705 None:intergenic 15.0%
!!! TTTTAAAATGTGAACTTATA+AGG - chr1_1:19383727-19383746 Msa0012720:CDS 15.0%
!! TGTGAGTATAAAAAATATAT+AGG + chr1_1:19383786-19383805 None:intergenic 15.0%
!!! ATATTGATGTTTTTAGTTTT+AGG + chr1_1:19383923-19383942 None:intergenic 15.0%
!! AATATGAAAAAAAAATTCCA+AGG + chr1_1:19384526-19384545 None:intergenic 15.0%
!!! TGTTCATTGTTATTATATAA+AGG + chr1_1:19384823-19384842 None:intergenic 15.0%
!!! TTTTATATTATTATATGGAC+AGG - chr1_1:19384913-19384932 Msa0012720:intron 15.0%
!!! TGAAATTTTAGAAATAATCA+TGG + chr1_1:19385182-19385201 None:intergenic 15.0%
!!! CAAATAAAACAAGATATTTT+AGG + chr1_1:19385541-19385560 None:intergenic 15.0%
!!! TGAAAAGAAGGAAATTTTAT+GGG + chr1_1:19378195-19378214 None:intergenic 20.0%
!!! ATGAAAAGAAGGAAATTTTA+TGG + chr1_1:19378196-19378215 None:intergenic 20.0%
!! GAAGAAAAGATAATATTACA+AGG - chr1_1:19378235-19378254 Msa0012720:three_prime_UTR 20.0%
!! AATCAAAGAAAGATTAAGAA+TGG + chr1_1:19378273-19378292 None:intergenic 20.0%
!!! TTTTCTGTAAAATTTGTTTG+AGG - chr1_1:19378405-19378424 Msa0012720:CDS 20.0%
!!! TTTGTTTGATCAATTTTATG+AGG - chr1_1:19378638-19378657 Msa0012720:intron 20.0%
!! AATATCGATGATTACTTTAA+AGG + chr1_1:19379627-19379646 None:intergenic 20.0%
!! AACACATCATTACTAAAATA+GGG - chr1_1:19379666-19379685 Msa0012720:intron 20.0%
!! AATGTAAACTTAATTTACCT+TGG + chr1_1:19380147-19380166 None:intergenic 20.0%
!!! AGATATAAACAATTTTCTGT+GGG + chr1_1:19380444-19380463 None:intergenic 20.0%
!!! TAGATATAAACAATTTTCTG+TGG + chr1_1:19380445-19380464 None:intergenic 20.0%
!! CATCATTAGAAGAAAATAAA+CGG + chr1_1:19380507-19380526 None:intergenic 20.0%
!!! GCAAAAAATAAATTGTTTTC+TGG - chr1_1:19380553-19380572 Msa0012720:intron 20.0%
!!! TCGGTTTCTTTTTATATTTT+TGG + chr1_1:19380701-19380720 None:intergenic 20.0%
!! TGAGTAGAGAAAAATAAAAA+TGG - chr1_1:19380743-19380762 Msa0012720:intron 20.0%
!!! ACATATTTTTCTATCATTGT+CGG - chr1_1:19380896-19380915 Msa0012720:intron 20.0%
!! CTATGAGAAAAATTATGAAA+TGG - chr1_1:19381192-19381211 Msa0012720:intron 20.0%
!! TTACTTTACTGCAATAAAAA+AGG + chr1_1:19381298-19381317 None:intergenic 20.0%
!!! TTTTTTATTGCAGTAAAGTA+AGG - chr1_1:19381297-19381316 Msa0012720:intron 20.0%
!!! TTTTTATTGCAGTAAAGTAA+GGG - chr1_1:19381298-19381317 Msa0012720:intron 20.0%
!! TTCATTTATATTTGTGTCTA+TGG + chr1_1:19381502-19381521 None:intergenic 20.0%
!!! AAGTAAAGTATTATTTGTTG+TGG + chr1_1:19381818-19381837 None:intergenic 20.0%
!! TTATCTAATAGCTGAAATAT+AGG - chr1_1:19381837-19381856 Msa0012720:intron 20.0%
!! TATCTAATAGCTGAAATATA+GGG - chr1_1:19381838-19381857 Msa0012720:intron 20.0%
!!! TTGAATAAATTATTTTGGAG+GGG + chr1_1:19382916-19382935 None:intergenic 20.0%
!! AGATTAGTGAAATTTATTAG+AGG - chr1_1:19383127-19383146 Msa0012720:intron 20.0%
!! TCTTAATGAGATTAAACAAA+TGG - chr1_1:19383596-19383615 Msa0012720:intron 20.0%
!!! GAAAAAAACTAAGTTTGTTT+AGG - chr1_1:19384581-19384600 Msa0012720:intron 20.0%
!!! TTTTCCTTCAAAAAAAACTA+TGG - chr1_1:19384667-19384686 Msa0012720:intron 20.0%
!! TAGCTTCTTTCAATATAATT+AGG - chr1_1:19385082-19385101 Msa0012720:CDS 20.0%
!! ATTTCACACACATATATAAA+TGG - chr1_1:19385196-19385215 Msa0012720:CDS 20.0%
!!! TCTTGTTTTATTTGTACTTT+TGG - chr1_1:19385547-19385566 Msa0012720:five_prime_UTR 20.0%
!! GATATCTATTATATCTTATG+AGG + chr1_1:19385668-19385687 None:intergenic 20.0%
! TTGCTTATTATATATAGCCT+TGG + chr1_1:19378541-19378560 None:intergenic 25.0%
! AAAGATGGAAATACAATACT+GGG - chr1_1:19378591-19378610 Msa0012720:intron 25.0%
! GATCAAACAAAAATAGCATA+TGG + chr1_1:19378629-19378648 None:intergenic 25.0%
! TGATGAGAAATCTTTAACAA+AGG + chr1_1:19378761-19378780 None:intergenic 25.0%
! TTTGTTAAAGATTTCTCATC+AGG - chr1_1:19378760-19378779 Msa0012720:intron 25.0%
! TTTGAAGAAAGATGAAGAAA+AGG - chr1_1:19379045-19379064 Msa0012720:intron 25.0%
!! TGATGAGATGTAAATTCTTT+TGG - chr1_1:19379426-19379445 Msa0012720:intron 25.0%
! GTAATCATCGATATTCTTAT+AGG - chr1_1:19379632-19379651 Msa0012720:intron 25.0%
! CAACACATCATTACTAAAAT+AGG - chr1_1:19379665-19379684 Msa0012720:intron 25.0%
! AGCACTATAAATTTCAGTAA+AGG + chr1_1:19379696-19379715 None:intergenic 25.0%
! TAAGAAGATGAAGATCATAT+AGG + chr1_1:19379783-19379802 None:intergenic 25.0%
! AACATTTGCATGCATATAAT+AGG - chr1_1:19379872-19379891 Msa0012720:intron 25.0%
!! TACGATAGGTTGAAATAATT+TGG + chr1_1:19379913-19379932 None:intergenic 25.0%
!! AGATTTGCTTGATAATATTC+TGG - chr1_1:19379971-19379990 Msa0012720:intron 25.0%
!!! TAATATTCTGGAATTGAAAG+AGG - chr1_1:19379983-19380002 Msa0012720:intron 25.0%
! AAGTTTACATTATGTAGGTA+CGG - chr1_1:19380156-19380175 Msa0012720:intron 25.0%
!! GATATAAACAATTTTCTGTG+GGG + chr1_1:19380443-19380462 None:intergenic 25.0%
! CACAATGAAGAGAAAATTAA+AGG + chr1_1:19380864-19380883 None:intergenic 25.0%
!! TTTTATTGCAGTAAAGTAAG+GGG - chr1_1:19381299-19381318 Msa0012720:intron 25.0%
! TAATTGTATCATGTTGAAAC+CGG - chr1_1:19381376-19381395 Msa0012720:intron 25.0%
!!! ATGTCTCTTTTTTTGGTTAA+CGG + chr1_1:19381475-19381494 None:intergenic 25.0%
! TTCATTTATGTTTGTGACTA+TGG - chr1_1:19381639-19381658 Msa0012720:intron 25.0%
! AGCAAAAAAGACTATGTATT+TGG + chr1_1:19381787-19381806 None:intergenic 25.0%
!!! TAAAGTATTATTTGTTGTGG+TGG + chr1_1:19381815-19381834 None:intergenic 25.0%
!! TTTTATCGTGTACATTCTTT+GGG + chr1_1:19382061-19382080 None:intergenic 25.0%
!! TTTTTATCGTGTACATTCTT+TGG + chr1_1:19382062-19382081 None:intergenic 25.0%
!!! AGAATTTTTCAACTGATGTT+TGG + chr1_1:19382346-19382365 None:intergenic 25.0%
! GAAAGAGGTAGTAAAAATTA+GGG + chr1_1:19382660-19382679 None:intergenic 25.0%
! ATTGAAGAAATTATACCTGA+TGG - chr1_1:19382946-19382965 Msa0012720:intron 25.0%
! AGAAATAAAATGATGAGTGT+CGG + chr1_1:19383432-19383451 None:intergenic 25.0%
!! ATAGTTCTTTTACTTTGACT+GGG + chr1_1:19383482-19383501 None:intergenic 25.0%
!! TATAGTTCTTTTACTTTGAC+TGG + chr1_1:19383483-19383502 None:intergenic 25.0%
! AAGAACTATAGTTATGTTGA+TGG - chr1_1:19383493-19383512 Msa0012720:intron 25.0%
!!! TGTATTAAATTTGTTGCAGA+AGG - chr1_1:19383524-19383543 Msa0012720:intron 25.0%
! TCTTTCTCATGTAAGTATAT+TGG - chr1_1:19383623-19383642 Msa0012720:intron 25.0%
! CTTTCTCATGTAAGTATATT+GGG - chr1_1:19383624-19383643 Msa0012720:intron 25.0%
! CTATTTATTATTGCCATTGA+TGG - chr1_1:19384207-19384226 Msa0012720:CDS 25.0%
!! TTTTCTTTAATGACCATCAA+TGG + chr1_1:19384223-19384242 None:intergenic 25.0%
!! TTCATCTACTTCATATTTTC+AGG - chr1_1:19384251-19384270 Msa0012720:CDS 25.0%
! AAATTCCATATTCAATTCCT+TGG - chr1_1:19384506-19384525 Msa0012720:CDS 25.0%
! AAATTCCAAGGAATTGAATA+TGG + chr1_1:19384514-19384533 None:intergenic 25.0%
!!! TAGACCATAGTTTTTTTTGA+AGG + chr1_1:19384674-19384693 None:intergenic 25.0%
! AAGGAAATGATGTAGAAATA+CGG + chr1_1:19385026-19385045 None:intergenic 25.0%
! AAACTCACTTGTAATTAAGA+AGG + chr1_1:19385045-19385064 None:intergenic 25.0%
! CTAATTTATCAATTTCGTGT+AGG - chr1_1:19385362-19385381 Msa0012720:five_prime_UTR 25.0%
!!! AGTCTTATATATTTTGAACG+AGG + chr1_1:19385590-19385609 None:intergenic 25.0%
! CGTTCAAAATATATAAGACT+TGG - chr1_1:19385590-19385609 Msa0012720:five_prime_UTR 25.0%
TCATTCTCATCTTAGATAGA+TGG - chr1_1:19378298-19378317 Msa0012720:three_prime_UTR 30.0%
! TTATATATAGCCTTGGAAGT+GGG + chr1_1:19378534-19378553 None:intergenic 30.0%
! ATTATATATAGCCTTGGAAG+TGG + chr1_1:19378535-19378554 None:intergenic 30.0%
CAAAGATGGAAATACAATAC+TGG - chr1_1:19378590-19378609 Msa0012720:intron 30.0%
AAAAACATCTAGTGTAGTCA+AGG - chr1_1:19379092-19379111 Msa0012720:intron 30.0%
AAAACATCTAGTGTAGTCAA+GGG - chr1_1:19379093-19379112 Msa0012720:intron 30.0%
!!! AACGATGAGACTTTTAAGAT+CGG - chr1_1:19379380-19379399 Msa0012720:intron 30.0%
TTAATCTCAGTTCTTACCAT+GGG - chr1_1:19379485-19379504 Msa0012720:CDS 30.0%
GGTACATTTCTAATGTATTG+TGG + chr1_1:19379511-19379530 None:intergenic 30.0%
AGACATTGTGATCAATTCTT+TGG - chr1_1:19379544-19379563 Msa0012720:CDS 30.0%
TCATATAGGAATACATTACC+AGG + chr1_1:19379769-19379788 None:intergenic 30.0%
TATATGCATGCAAATGTTGA+TGG + chr1_1:19379870-19379889 None:intergenic 30.0%
GACATTATTGACATGTTGAT+AGG - chr1_1:19380032-19380051 Msa0012720:intron 30.0%
!! TTGGCTCTTTTCAAAATATG+TGG + chr1_1:19380128-19380147 None:intergenic 30.0%
!! ACATATTTTGAAAAGAGCCA+AGG - chr1_1:19380127-19380146 Msa0012720:intron 30.0%
CATATTAAACGTTACCTAAG+GGG + chr1_1:19380290-19380309 None:intergenic 30.0%
CCATATTAAACGTTACCTAA+GGG + chr1_1:19380291-19380310 None:intergenic 30.0%
CCTTAGGTAACGTTTAATAT+GGG - chr1_1:19380289-19380308 Msa0012720:CDS 30.0%
!!! AAGATTCTTTTTTCCCATGA+TGG - chr1_1:19380314-19380333 Msa0012720:intron 30.0%
!!! AGATTCTTTTTTCCCATGAT+GGG - chr1_1:19380315-19380334 Msa0012720:intron 30.0%
TTTGCCAAAAAGTTGTAAGA+AGG + chr1_1:19380408-19380427 None:intergenic 30.0%
!!! GAATAGCACTTTTTTTCAAG+CGG - chr1_1:19380613-19380632 Msa0012720:intron 30.0%
!! CTTTTAGCTGAAGAAGAAAT+AGG + chr1_1:19380777-19380796 None:intergenic 30.0%
! GAAGAGAAAATTAAAGGCAT+TGG + chr1_1:19380858-19380877 None:intergenic 30.0%
TTCTCTTCATTGTGATTGTT+TGG - chr1_1:19380870-19380889 Msa0012720:intron 30.0%
AGGATTGGAGGAAAATTAAA+TGG - chr1_1:19381056-19381075 Msa0012720:intron 30.0%
TGATAGATGAAGAGTAACAA+AGG - chr1_1:19381260-19381279 Msa0012720:intron 30.0%
TTTATTGCAGTAAAGTAAGG+GGG - chr1_1:19381300-19381319 Msa0012720:intron 30.0%
!!! TGTCTCTTTTTTTGGTTAAC+GGG + chr1_1:19381474-19381493 None:intergenic 30.0%
!!! TGGAAGAATGTCTCTTTTTT+TGG + chr1_1:19381482-19381501 None:intergenic 30.0%
!!! AAGGGGACTAGTATTTTTTT+TGG + chr1_1:19381676-19381695 None:intergenic 30.0%
!!! ACTGCTTGTACTTTTTCTAA+TGG + chr1_1:19381721-19381740 None:intergenic 30.0%
! TATTTGGTGAACATTTGTGT+TGG + chr1_1:19381771-19381790 None:intergenic 30.0%
TCGCCAAATTTGAATTTGTA+GGG - chr1_1:19382156-19382175 Msa0012720:intron 30.0%
TCTCCCTACAAATTCAAATT+TGG + chr1_1:19382162-19382181 None:intergenic 30.0%
AATTTGAATTTGTAGGGAGA+CGG - chr1_1:19382162-19382181 Msa0012720:intron 30.0%
!! TAAAGGTTTCCATTTTTGCT+TGG + chr1_1:19382202-19382221 None:intergenic 30.0%
!! AAACATGTTTTTGCAAGGTT+GGG + chr1_1:19382468-19382487 None:intergenic 30.0%
!! GTTAGAAACATGTTTTTGCA+AGG + chr1_1:19382473-19382492 None:intergenic 30.0%
AGGTAGTAAAAATTAGGGAT+GGG + chr1_1:19382655-19382674 None:intergenic 30.0%
GGAAAGAGGTAGTAAAAATT+AGG + chr1_1:19382661-19382680 None:intergenic 30.0%
ACAGTTGAAGGAATTTAATG+AGG + chr1_1:19382813-19382832 None:intergenic 30.0%
GTTTGTATGCAAAAGAAGTA+CGG + chr1_1:19382851-19382870 None:intergenic 30.0%
! TTCATACTCTCGCTATATTT+TGG + chr1_1:19383188-19383207 None:intergenic 30.0%
GAAATAAAATGATGAGTGTC+GGG + chr1_1:19383431-19383450 None:intergenic 30.0%
!! AAGACTTAATACTTTTTGCG+TGG + chr1_1:19383580-19383599 None:intergenic 30.0%
GCAAGAACATAACATAAGTT+TGG + chr1_1:19383972-19383991 None:intergenic 30.0%
TTCTTGCTTATACATAAAGC+CGG - chr1_1:19383985-19384004 Msa0012720:intron 30.0%
TGTTGCAATGCATTACATAT+AGG - chr1_1:19384073-19384092 Msa0012720:intron 30.0%
AAAAGAGATGTTACCATCAA+TGG - chr1_1:19384152-19384171 Msa0012720:CDS 30.0%
TCAGGTTATATAATACCGAA+AGG - chr1_1:19384269-19384288 Msa0012720:CDS 30.0%
GTTATATAATACCGAAAGGA+TGG - chr1_1:19384273-19384292 Msa0012720:CDS 30.0%
TCCTACATATTATCCGAATT+CGG - chr1_1:19384331-19384350 Msa0012720:CDS 30.0%
TGAATTTAACCCATCAAGAT+GGG - chr1_1:19384355-19384374 Msa0012720:CDS 30.0%
AAAGATATACGGACAATGTA+AGG - chr1_1:19384738-19384757 Msa0012720:intron 30.0%
ATATAAATGGTTGAGATTCG+TGG - chr1_1:19385209-19385228 Msa0012720:CDS 30.0%
TAGTTGTTTGTTTCATCACT+TGG - chr1_1:19385481-19385500 Msa0012720:five_prime_UTR 30.0%
TGGAAATACAATACTGGGTT+TGG - chr1_1:19378596-19378615 Msa0012720:intron 35.0%
TTATGAGGAGATTAACTGAG+TGG - chr1_1:19378653-19378672 Msa0012720:intron 35.0%
GTCAACATATTGCCAATAAG+TGG + chr1_1:19378739-19378758 None:intergenic 35.0%
! TGTTGATGAATGAATCAGGA+TGG + chr1_1:19378786-19378805 None:intergenic 35.0%
! AGGTTGTTGATGAATGAATC+AGG + chr1_1:19378790-19378809 None:intergenic 35.0%
GTGAAGAAGAAGAATCTCAA+GGG + chr1_1:19378839-19378858 None:intergenic 35.0%
TGTGAAGAAGAAGAATCTCA+AGG + chr1_1:19378840-19378859 None:intergenic 35.0%
ACATGTTGTAAGCCGTATAT+TGG - chr1_1:19378918-19378937 Msa0012720:intron 35.0%
!! TTCGCAAAAGTACCATAAAC+CGG + chr1_1:19378954-19378973 None:intergenic 35.0%
ATAAATTCCCCTGTAACTCA+TGG - chr1_1:19378983-19379002 Msa0012720:intron 35.0%
ATCAGTTTCCATGAGTTACA+GGG + chr1_1:19378994-19379013 None:intergenic 35.0%
AGATGAAGAAAAGGTTGAGT+AGG - chr1_1:19379054-19379073 Msa0012720:intron 35.0%
ATAATTTAGCCACGCCAAAA+TGG + chr1_1:19379133-19379152 None:intergenic 35.0%
!! CACTTGCTAGCTTATGTTTT+AGG - chr1_1:19379267-19379286 Msa0012720:intron 35.0%
!! GCTAGCTTATGTTTTAGGTA+TGG - chr1_1:19379272-19379291 Msa0012720:intron 35.0%
!! TGTTTTAGGTATGGAAGAAC+TGG - chr1_1:19379281-19379300 Msa0012720:intron 35.0%
ATCTACAAGTCACACTTGTT+TGG - chr1_1:19379305-19379324 Msa0012720:intron 35.0%
TCTACAAGTCACACTTGTTT+GGG - chr1_1:19379306-19379325 Msa0012720:intron 35.0%
TTTGTGATGCTGATATGTGT+AGG - chr1_1:19379345-19379364 Msa0012720:intron 35.0%
!!! ATCACTTCCATAGTGGATTT+TGG + chr1_1:19379410-19379429 None:intergenic 35.0%
CTTAATCTCAGTTCTTACCA+TGG - chr1_1:19379484-19379503 Msa0012720:CDS 35.0%
AGAAATGTACCTAACTCGTA+TGG - chr1_1:19379520-19379539 Msa0012720:CDS 35.0%
CATTGTGATCAATTCTTTGG+AGG - chr1_1:19379547-19379566 Msa0012720:CDS 35.0%
TCTCTTTCAAAAACTCCACT+GGG + chr1_1:19379592-19379611 None:intergenic 35.0%
ATCTCTTTCAAAAACTCCAC+TGG + chr1_1:19379593-19379612 None:intergenic 35.0%
TTCAACCTATCGTAGAAGAA+AGG - chr1_1:19379919-19379938 Msa0012720:intron 35.0%
!! TTGATAGGTTTTGTACTTGC+TGG - chr1_1:19380047-19380066 Msa0012720:intron 35.0%
TATAATTGCCCACATCATAC+CGG + chr1_1:19380090-19380109 None:intergenic 35.0%
CCCTTAGGTAACGTTTAATA+TGG - chr1_1:19380288-19380307 Msa0012720:CDS 35.0%
CCCATATTAAACGTTACCTA+AGG + chr1_1:19380292-19380311 None:intergenic 35.0%
AACATCAACTTTCCCATCAT+GGG + chr1_1:19380330-19380349 None:intergenic 35.0%
AAACATCAACTTTCCCATCA+TGG + chr1_1:19380331-19380350 None:intergenic 35.0%
! GCAACCTTCTTACAACTTTT+TGG - chr1_1:19380401-19380420 Msa0012720:intron 35.0%
GCCTTTATGTTTGTGAATGT+GGG - chr1_1:19380478-19380497 Msa0012720:intron 35.0%
!! ATTAAAGGCATTGGTGTTAG+TGG + chr1_1:19380849-19380868 None:intergenic 35.0%
ATCTTCAACCAAGACTACAA+GGG + chr1_1:19380986-19381005 None:intergenic 35.0%
TATCTTCAACCAAGACTACA+AGG + chr1_1:19380987-19381006 None:intergenic 35.0%
! TTGTAGTCTTGGTTGAAGAT+AGG - chr1_1:19380986-19381005 Msa0012720:intron 35.0%
TATTCAAAATGGAGGATTGG+AGG - chr1_1:19381044-19381063 Msa0012720:intron 35.0%
GGAGGAAAATTAAATGGATG+AGG - chr1_1:19381062-19381081 Msa0012720:intron 35.0%
! TTTGGAGCAAAATCACAAGA+AGG - chr1_1:19381104-19381123 Msa0012720:intron 35.0%
TTGGAGCAAAATCACAAGAA+GGG - chr1_1:19381105-19381124 Msa0012720:intron 35.0%
GGTAACGTTTAATATGGGAA+AGG + chr1_1:19380294-19380313 None:intergenic 35.0%
!!! TCTTTTTTTGGTTAACGGGA+CGG + chr1_1:19381470-19381489 None:intergenic 35.0%
! GAAAAAGTACAAGCAGTTCA+AGG - chr1_1:19381724-19381743 Msa0012720:intron 35.0%
TTCAAGGAATACACGACAAA+GGG - chr1_1:19381740-19381759 Msa0012720:intron 35.0%
TGTGGAATGAGCGAAATAAT+AGG + chr1_1:19381884-19381903 None:intergenic 35.0%
GTACATTCTTTGGGTCTATA+TGG + chr1_1:19382052-19382071 None:intergenic 35.0%
GTCGCCAAATTTGAATTTGT+AGG - chr1_1:19382155-19382174 Msa0012720:intron 35.0%
GCAAAAATGGAAACCTTTAG+CGG - chr1_1:19382203-19382222 Msa0012720:intron 35.0%
GAAGTGATGTAGAAGTTTGT+GGG + chr1_1:19382426-19382445 None:intergenic 35.0%
!! GAAACATGTTTTTGCAAGGT+TGG + chr1_1:19382469-19382488 None:intergenic 35.0%
TCACCGCTAAATCAAATAAC+CGG - chr1_1:19382507-19382526 Msa0012720:intron 35.0%
! TAGCCGGTTATTTGATTTAG+CGG + chr1_1:19382513-19382532 None:intergenic 35.0%
GGTAGTAAAAATTAGGGATG+GGG + chr1_1:19382654-19382673 None:intergenic 35.0%
GAGGTAGTAAAAATTAGGGA+TGG + chr1_1:19382656-19382675 None:intergenic 35.0%
! AGACTTTTAGTAGATAGAGG+TGG + chr1_1:19382767-19382786 None:intergenic 35.0%
! TGGAGACTTTTAGTAGATAG+AGG + chr1_1:19382770-19382789 None:intergenic 35.0%
!! GAATTTAATGAGGCGTTGTT+GGG + chr1_1:19382803-19382822 None:intergenic 35.0%
ATAGGAAAATCTCTTGGGTA+GGG + chr1_1:19382883-19382902 None:intergenic 35.0%
GGATCATAGGAAAATCTCTT+GGG + chr1_1:19382888-19382907 None:intergenic 35.0%
AGGATCATAGGAAAATCTCT+TGG + chr1_1:19382889-19382908 None:intergenic 35.0%
GGAAATCATGAAGAGAAGAA+TGG - chr1_1:19383554-19383573 Msa0012720:intron 35.0%
GATAAGACTATATACACCTC+CGG + chr1_1:19384007-19384026 None:intergenic 35.0%
TTGCGAAGTTTATACTCACA+AGG + chr1_1:19384118-19384137 None:intergenic 35.0%
ATGTTACCATCAATGGTTTG+TGG - chr1_1:19384159-19384178 Msa0012720:CDS 35.0%
ATGTGAATAGCTCTTAACCA+AGG + chr1_1:19384308-19384327 None:intergenic 35.0%
TTGGTTAAGAGCTATTCACA+TGG - chr1_1:19384307-19384326 Msa0012720:CDS 35.0%
CCTACATATTATCCGAATTC+GGG - chr1_1:19384332-19384351 Msa0012720:CDS 35.0%
GTGAATTTAACCCATCAAGA+TGG - chr1_1:19384354-19384373 Msa0012720:CDS 35.0%
AACTTACATCCCATCTTGAT+GGG + chr1_1:19384367-19384386 None:intergenic 35.0%
TTTATCAATTTCGTGTAGGC+TGG - chr1_1:19385366-19385385 Msa0012720:five_prime_UTR 35.0%
AAACCTTTATCACCTTAGCA+AGG + chr1_1:19385453-19385472 None:intergenic 35.0%
GCTGCAACAACATGAAAAGA+AGG + chr1_1:19378207-19378226 None:intergenic 40.0%
TTTCATGTTGTTGCAGCATG+TGG - chr1_1:19378210-19378229 Msa0012720:three_prime_UTR 40.0%
CAACTCTGACACAAGATCAA+GGG - chr1_1:19378453-19378472 Msa0012720:intron 40.0%
AACTCTGACACAAGATCAAG+GGG - chr1_1:19378454-19378473 Msa0012720:intron 40.0%
! TCATCAACAACCTTGTTTCC+AGG - chr1_1:19378797-19378816 Msa0012720:intron 40.0%
ATGAAAGAGACCTGGAAACA+AGG + chr1_1:19378810-19378829 None:intergenic 40.0%
GGTACGCAAGTACCAATATA+CGG + chr1_1:19378933-19378952 None:intergenic 40.0%
GTATATTGGTACTTGCGTAC+CGG - chr1_1:19378932-19378951 Msa0012720:intron 40.0%
TCAGTTTCCATGAGTTACAG+GGG + chr1_1:19378993-19379012 None:intergenic 40.0%
CATCAGTTTCCATGAGTTAC+AGG + chr1_1:19378995-19379014 None:intergenic 40.0%
CTGTAACTCATGGAAACTGA+TGG - chr1_1:19378993-19379012 Msa0012720:intron 40.0%
! ACTCATGGAAACTGATGGAT+CGG - chr1_1:19378998-19379017 Msa0012720:intron 40.0%
! CGGATTCAGACATACCATTT+TGG - chr1_1:19379116-19379135 Msa0012720:intron 40.0%
GAAATAACACTGTTCGTCTC+TGG - chr1_1:19379183-19379202 Msa0012720:intron 40.0%
! GCATCACAAATGATGATGCT+TGG + chr1_1:19379335-19379354 None:intergenic 40.0%
CGGTTATCCAAAATCCACTA+TGG - chr1_1:19379400-19379419 Msa0012720:intron 40.0%
ACATCTCATCACTTCCATAG+TGG + chr1_1:19379417-19379436 None:intergenic 40.0%
TTCTAATGTATTGTGGCCCA+TGG + chr1_1:19379504-19379523 None:intergenic 40.0%
CAATGTCTTCCATACGAGTT+AGG + chr1_1:19379532-19379551 None:intergenic 40.0%
ATCTAGTATGAATCACCCAG+TGG - chr1_1:19379574-19379593 Msa0012720:intron 40.0%
GCAAAACCAGGAAGGTTAAT+GGG + chr1_1:19379731-19379750 None:intergenic 40.0%
AGCAAAACCAGGAAGGTTAA+TGG + chr1_1:19379732-19379751 None:intergenic 40.0%
TATGGAAAGCAAAACCAGGA+AGG + chr1_1:19379739-19379758 None:intergenic 40.0%
CCTTTATGGAAAGCAAAACC+AGG + chr1_1:19379743-19379762 None:intergenic 40.0%
!!! CCTGGTTTTGCTTTCCATAA+AGG - chr1_1:19379740-19379759 Msa0012720:CDS 40.0%
ACATTACCAGGAGTCCTTTA+TGG + chr1_1:19379757-19379776 None:intergenic 40.0%
AACCTATCGTAGAAGAAAGG+AGG - chr1_1:19379922-19379941 Msa0012720:intron 40.0%
AACCTCCTTTCTTCTACGAT+AGG + chr1_1:19379927-19379946 None:intergenic 40.0%
CTGGAATTGAAAGAGGAAGA+CGG - chr1_1:19379990-19380009 Msa0012720:intron 40.0%
AATTGAAAGAGGAAGACGGT+TGG - chr1_1:19379994-19380013 Msa0012720:intron 40.0%
TCAATAATGTCCTCATCCTC+AGG + chr1_1:19380023-19380042 None:intergenic 40.0%
ACTACTATACTAGTCCCCTT+AGG - chr1_1:19380273-19380292 Msa0012720:CDS 40.0%
GAATGGTTCAGATCTGTTGA+TGG - chr1_1:19380379-19380398 Msa0012720:intron 40.0%
GGCCTTTATGTTTGTGAATG+TGG - chr1_1:19380477-19380496 Msa0012720:intron 40.0%
GCCCACATTCACAAACATAA+AGG + chr1_1:19380482-19380501 None:intergenic 40.0%
AGAGGTTGAAGATAGTAAGG+TGG + chr1_1:19380811-19380830 None:intergenic 40.0%
TGCAGAGGTTGAAGATAGTA+AGG + chr1_1:19380814-19380833 None:intergenic 40.0%
CTTGGTTGAAGATAGGAAGA+TGG - chr1_1:19380993-19381012 Msa0012720:intron 40.0%
CTAGAGGAAACTACAGAGAT+GGG - chr1_1:19381016-19381035 Msa0012720:intron 40.0%
GCGTATTCAAAATGGAGGAT+TGG - chr1_1:19381041-19381060 Msa0012720:intron 40.0%
AAATGGATGAGGTGTAGAGA+TGG - chr1_1:19381073-19381092 Msa0012720:intron 40.0%
AATGGATGAGGTGTAGAGAT+GGG - chr1_1:19381074-19381093 Msa0012720:intron 40.0%
GTCATACTCATCATTCACGA+TGG - chr1_1:19381215-19381234 Msa0012720:intron 40.0%
ATACTCATCATTCACGATGG+AGG - chr1_1:19381218-19381237 Msa0012720:intron 40.0%
AGATGAAGAGTAACAAAGGC+AGG - chr1_1:19381264-19381283 Msa0012720:intron 40.0%
GATGAAGAGTAACAAAGGCA+GGG - chr1_1:19381265-19381284 Msa0012720:intron 40.0%
!!! GGATTCTTTTTTCCCACCAT+GGG + chr1_1:19381428-19381447 None:intergenic 40.0%
!!! AGGATTCTTTTTTCCCACCA+TGG + chr1_1:19381429-19381448 None:intergenic 40.0%
GGGACGGTAACGTTTAATAT+GGG + chr1_1:19381454-19381473 None:intergenic 40.0%
GTTCAAGGAATACACGACAA+AGG - chr1_1:19381739-19381758 Msa0012720:intron 40.0%
TCCACAAAGTCCATACAGTA+AGG - chr1_1:19381898-19381917 Msa0012720:intron 40.0%
TCCTTACTGTATGGACTTTG+TGG + chr1_1:19381902-19381921 None:intergenic 40.0%
! TTGTTTGGCTCCTTACTGTA+TGG + chr1_1:19381911-19381930 None:intergenic 40.0%
ACTCAGTTTACTTTCTCCAC+AGG + chr1_1:19381966-19381985 None:intergenic 40.0%
GGTCTATATGGCCAATATTG+CGG + chr1_1:19382040-19382059 None:intergenic 40.0%
AATTCAAATTTGGCGACTCG+TGG + chr1_1:19382152-19382171 None:intergenic 40.0%
!! AGGTTTCCATTTTTGCTTGG+CGG + chr1_1:19382199-19382218 None:intergenic 40.0%
GCATAAACAAGTTCCGCTAA+AGG + chr1_1:19382219-19382238 None:intergenic 40.0%
! GGCATGATTTGGACTTGATT+TGG + chr1_1:19382241-19382260 None:intergenic 40.0%
TTATGACATGCTCACTTCTC+AGG + chr1_1:19382279-19382298 None:intergenic 40.0%
TTTCAACTGATGTTTGGCAG+TGG + chr1_1:19382340-19382359 None:intergenic 40.0%
GGAAGTGATGTAGAAGTTTG+TGG + chr1_1:19382427-19382446 None:intergenic 40.0%
! TTTTGCAAGGTTGGGAGAAA+GGG + chr1_1:19382460-19382479 None:intergenic 40.0%
! TTTTTGCAAGGTTGGGAGAA+AGG + chr1_1:19382461-19382480 None:intergenic 40.0%
AGCGGTGACTAAATCAGTTA+CGG + chr1_1:19382495-19382514 None:intergenic 40.0%
!! TGTTTCGTGTTCGTTTTAGC+CGG + chr1_1:19382529-19382548 None:intergenic 40.0%
GTAAAAATTAGGGATGGGGT+AGG + chr1_1:19382650-19382669 None:intergenic 40.0%
!! AGAGTGTTGGTAGCTAGATA+TGG + chr1_1:19382734-19382753 None:intergenic 40.0%
! TGGTTTGTGGTATAGAGTGT+TGG + chr1_1:19382747-19382766 None:intergenic 40.0%
TAGTAGATAGAGGTGGTTTG+TGG + chr1_1:19382760-19382779 None:intergenic 40.0%
!! GGAATTTAATGAGGCGTTGT+TGG + chr1_1:19382804-19382823 None:intergenic 40.0%
! GTATGCAAAAGAAGTACGGT+GGG + chr1_1:19382847-19382866 None:intergenic 40.0%
! TGTATGCAAAAGAAGTACGG+TGG + chr1_1:19382848-19382867 None:intergenic 40.0%
CATAGGAAAATCTCTTGGGT+AGG + chr1_1:19382884-19382903 None:intergenic 40.0%
!!! AATTATTTTGGAGGGGAGTG+AGG + chr1_1:19382909-19382928 None:intergenic 40.0%
!! AAATTTGTTGCAGAAGGAGC+AGG - chr1_1:19383530-19383549 Msa0012720:intron 40.0%
GGGAATTCTCATATGTGTGT+TGG - chr1_1:19383644-19383663 Msa0012720:intron 40.0%
TTGCTTATACATAAAGCCGG+AGG - chr1_1:19383988-19384007 Msa0012720:intron 40.0%
!! AAACTTCGCAAGTTTTCGAG+AGG - chr1_1:19384127-19384146 Msa0012720:CDS 40.0%
GAATAGCCACAAACCATTGA+TGG + chr1_1:19384168-19384187 None:intergenic 40.0%
GGTAACACTTTCCATCCTTT+CGG + chr1_1:19384287-19384306 None:intergenic 40.0%
!! AAGGATGGAAAGTGTTACCT+TGG - chr1_1:19384288-19384307 Msa0012720:CDS 40.0%
CCCGAATTCGGATAATATGT+AGG + chr1_1:19384335-19384354 None:intergenic 40.0%
GGGTTAAATTCACCCGAATT+CGG + chr1_1:19384347-19384366 None:intergenic 40.0%
CAACTTACATCCCATCTTGA+TGG + chr1_1:19384368-19384387 None:intergenic 40.0%
AGGATCACAATGCCAAAGTT+GGG - chr1_1:19384933-19384952 Msa0012720:intron 40.0%
TACTTCCTGCTCCAAAAGAA+AGG + chr1_1:19384964-19384983 None:intergenic 40.0%
! CAGGAAGTATGTATTGTCCT+GGG - chr1_1:19384975-19384994 Msa0012720:intron 40.0%
AAGCTAGTAATAGGACAGTC+TGG + chr1_1:19385403-19385422 None:intergenic 40.0%
! GGTGATGGTAAGCTAGTAAT+AGG + chr1_1:19385412-19385431 None:intergenic 40.0%
TTAGCAAGGCAATTGTCTCT+GGG + chr1_1:19385439-19385458 None:intergenic 40.0%
TTGCCTTGCTAAGGTGATAA+AGG - chr1_1:19385447-19385466 Msa0012720:five_prime_UTR 40.0%
!! ATCTTGTGTCAGAGTTGGTG+AGG + chr1_1:19378450-19378469 None:intergenic 45.0%
CCTTGATCTTGTGTCAGAGT+TGG + chr1_1:19378455-19378474 None:intergenic 45.0%
CCAACTCTGACACAAGATCA+AGG - chr1_1:19378452-19378471 Msa0012720:CDS 45.0%
ACTCTGACACAAGATCAAGG+GGG - chr1_1:19378455-19378474 Msa0012720:intron 45.0%
CATATGGGATGGCCACTTAT+TGG - chr1_1:19378724-19378743 Msa0012720:intron 45.0%
GGCAGAAAATGAAAGAGACC+TGG + chr1_1:19378818-19378837 None:intergenic 45.0%
ACATCTAGTGTAGTCAAGGG+CGG - chr1_1:19379096-19379115 Msa0012720:intron 45.0%
!! TCAGACATACCATTTTGGCG+TGG - chr1_1:19379121-19379140 Msa0012720:intron 45.0%
GCGCATGTAAGTGTGTGTTT+AGG + chr1_1:19379215-19379234 None:intergenic 45.0%
TCTATGCCCATTAACCTTCC+TGG - chr1_1:19379722-19379741 Msa0012720:CDS 45.0%
TGCTTTCCATAAAGGACTCC+TGG - chr1_1:19379748-19379767 Msa0012720:intron 45.0%
CATAGCAACCGGTATGATGT+GGG - chr1_1:19380079-19380098 Msa0012720:intron 45.0%
!! AAAGGCATTGGTGTTAGTGG+TGG + chr1_1:19380846-19380865 None:intergenic 45.0%
GAGGAATTGTTGAACGTGTG+GGG + chr1_1:19380956-19380975 None:intergenic 45.0%
GGAGGAATTGTTGAACGTGT+GGG + chr1_1:19380957-19380976 None:intergenic 45.0%
AGGAGGAATTGTTGAACGTG+TGG + chr1_1:19380958-19380977 None:intergenic 45.0%
CAACCAAGACTACAAGGGAT+CGG + chr1_1:19380981-19381000 None:intergenic 45.0%
GAAGATAGGAAGATGGCTAG+AGG - chr1_1:19381000-19381019 Msa0012720:intron 45.0%
GCTAGAGGAAACTACAGAGA+TGG - chr1_1:19381015-19381034 Msa0012720:intron 45.0%
GATGGGTGGCGTATTCAAAA+TGG - chr1_1:19381033-19381052 Msa0012720:intron 45.0%
! GTAGAGATGGGTGTTGTGTT+TGG - chr1_1:19381086-19381105 Msa0012720:intron 45.0%
TCCACTGTTATGCAAAGAGC+TGG - chr1_1:19381157-19381176 Msa0012720:intron 45.0%
CCACTGTTATGCAAAGAGCT+GGG - chr1_1:19381158-19381177 Msa0012720:intron 45.0%
TGTATCATGTTGAAACCGGC+TGG - chr1_1:19381380-19381399 Msa0012720:intron 45.0%
TTAATGGCCTCACTTTCCCA+TGG - chr1_1:19381409-19381428 Msa0012720:intron 45.0%
CGGGACGGTAACGTTTAATA+TGG + chr1_1:19381455-19381474 None:intergenic 45.0%
ATACTAGTCCCCTTACCACA+AGG - chr1_1:19381682-19381701 Msa0012720:intron 45.0%
TTCGATACGCCTTGTGGTAA+GGG + chr1_1:19381694-19381713 None:intergenic 45.0%
GGTGAACATTTGTGTTGGAC+AGG + chr1_1:19381766-19381785 None:intergenic 45.0%
CAGTTTACTTTCTCCACAGG+TGG + chr1_1:19381963-19381982 None:intergenic 45.0%
! AGGAGTTACTAGAGGAGTGT+AGG + chr1_1:19382394-19382413 None:intergenic 45.0%
GTGGAAAGAGGAGTTACTAG+AGG + chr1_1:19382402-19382421 None:intergenic 45.0%
AAGTTTGTGGGTGTGGAAAG+AGG + chr1_1:19382414-19382433 None:intergenic 45.0%
GATGTAGAAGTTTGTGGGTG+TGG + chr1_1:19382421-19382440 None:intergenic 45.0%
TTTGCAAGGTTGGGAGAAAG+GGG + chr1_1:19382459-19382478 None:intergenic 45.0%
!! ACACGTCATTTTGGCGTGAT+CGG + chr1_1:19382568-19382587 None:intergenic 45.0%
! ATGGAGCAGACACGTCATTT+TGG + chr1_1:19382577-19382596 None:intergenic 45.0%
AAAATTAGGGATGGGGTAGG+TGG + chr1_1:19382647-19382666 None:intergenic 45.0%
!! GTTGGTAGCTAGATATGGTG+AGG + chr1_1:19382729-19382748 None:intergenic 45.0%
!! AAAAGAAGTACGGTGGGTTG+GGG + chr1_1:19382841-19382860 None:intergenic 45.0%
! CAAAAGAAGTACGGTGGGTT+GGG + chr1_1:19382842-19382861 None:intergenic 45.0%
CAATGCTCTTTCCTTCGTCA+AGG + chr1_1:19382974-19382993 None:intergenic 45.0%
! CTTGACGAAGGAAAGAGCAT+TGG - chr1_1:19382972-19382991 Msa0012720:intron 45.0%
CAGGATCACAATGCCAAAGT+TGG - chr1_1:19384932-19384951 Msa0012720:intron 45.0%
AGAAAGGAAGGTCCCAACTT+TGG + chr1_1:19384948-19384967 None:intergenic 45.0%
! GTTGGGACCTTCCTTTCTTT+TGG - chr1_1:19384950-19384969 Msa0012720:intron 45.0%
!!! ACCTTCCTTTCTTTTGGAGC+AGG - chr1_1:19384956-19384975 Msa0012720:intron 45.0%
TCCTGCTCCAAAAGAAAGGA+AGG + chr1_1:19384960-19384979 None:intergenic 45.0%
! GCAGGAAGTATGTATTGTCC+TGG - chr1_1:19384974-19384993 Msa0012720:intron 45.0%
! ATTTTTGCCAAGTCACTCCC+AGG + chr1_1:19384995-19385014 None:intergenic 45.0%
CTTAGCAAGGCAATTGTCTC+TGG + chr1_1:19385440-19385459 None:intergenic 45.0%
CAGAGACAATTGCCTTGCTA+AGG - chr1_1:19385438-19385457 Msa0012720:five_prime_UTR 45.0%
!! TTAAAATAATAATATATCAA+TGG + chr1_1:19380357-19380376 None:intergenic 5.0%
!!! ATATTATTATTTTAAATGAA+TGG - chr1_1:19380362-19380381 Msa0012720:intron 5.0%
!!! CTTTTAAATTAAAAATAAAT+TGG - chr1_1:19380646-19380665 Msa0012720:intron 5.0%
!!! ATATATTTATTTTTTTTAGA+AGG - chr1_1:19384860-19384879 Msa0012720:intron 5.0%
!! CAGAGTTGGTGAGGATGAGA+TGG + chr1_1:19378441-19378460 None:intergenic 50.0%
TGGAAGTGGGACGTTGAAGA+GGG + chr1_1:19378521-19378540 None:intergenic 50.0%
TTGGAAGTGGGACGTTGAAG+AGG + chr1_1:19378522-19378541 None:intergenic 50.0%
TCTTCAACGTCCCACTTCCA+AGG - chr1_1:19378521-19378540 Msa0012720:intron 50.0%
ATACAATACCCACTGCCTCC+TGG - chr1_1:19378700-19378719 Msa0012720:intron 50.0%
!! GGTACTTGCGTACCGGTTTA+TGG - chr1_1:19378939-19378958 Msa0012720:intron 50.0%
GGTCATGAAGCCATAGCAAC+CGG - chr1_1:19380068-19380087 Msa0012720:intron 50.0%
! CCACATCATACCGGTTGCTA+TGG + chr1_1:19380081-19380100 None:intergenic 50.0%
CCATAGCAACCGGTATGATG+TGG - chr1_1:19380078-19380097 Msa0012720:intron 50.0%
GGTCCTACGCAAGGGATTTA+GGG + chr1_1:19380935-19380954 None:intergenic 50.0%
GAGGAAACTACAGAGATGGG+TGG - chr1_1:19381019-19381038 Msa0012720:intron 50.0%
GGGTGGCGTATTCAAAATGG+AGG - chr1_1:19381036-19381055 Msa0012720:intron 50.0%
TCACAAGAAGGGAACTCGTG+TGG - chr1_1:19381116-19381135 Msa0012720:intron 50.0%
CCCAGCTCTTTGCATAACAG+TGG + chr1_1:19381161-19381180 None:intergenic 50.0%
AACCGGCTGGTGTCTGTTAA+TGG - chr1_1:19381393-19381412 Msa0012720:intron 50.0%
TTTCCCACCATGGGAAAGTG+AGG + chr1_1:19381419-19381438 None:intergenic 50.0%
TCGATACGCCTTGTGGTAAG+GGG + chr1_1:19381693-19381712 None:intergenic 50.0%
CTTCGATACGCCTTGTGGTA+AGG + chr1_1:19381695-19381714 None:intergenic 50.0%
TACCACAAGGCGTATCGAAG+AGG - chr1_1:19381695-19381714 Msa0012720:intron 50.0%
CAGTAAGGAGCCAAACAAGC+TGG - chr1_1:19381913-19381932 Msa0012720:intron 50.0%
TAAGGAGCCAAACAAGCTGG+AGG - chr1_1:19381916-19381935 Msa0012720:intron 50.0%
! GGTCTTTCCTCCAGCTTGTT+TGG + chr1_1:19381926-19381945 None:intergenic 50.0%
CAGGTGGTATGAAATCGCGA+AGG + chr1_1:19381947-19381966 None:intergenic 50.0%
TCGCGATTTCATACCACCTG+TGG - chr1_1:19381947-19381966 Msa0012720:intron 50.0%
!! CGGTCGTGGATTGGATTTGA+AGG + chr1_1:19382020-19382039 None:intergenic 50.0%
CCAATATTGCGGTCGTGGAT+TGG + chr1_1:19382029-19382048 None:intergenic 50.0%
CCAATCCACGACCGCAATAT+TGG - chr1_1:19382026-19382045 Msa0012720:intron 50.0%
TATGGCCAATATTGCGGTCG+TGG + chr1_1:19382034-19382053 None:intergenic 50.0%
TCGTGGTGTTCTCTTCTCTG+AGG + chr1_1:19382135-19382154 None:intergenic 50.0%
AAGCAGCCGCCAAGCAAAAA+TGG - chr1_1:19382190-19382209 Msa0012720:intron 50.0%
AGCGCAGATTCGGCATGATT+TGG + chr1_1:19382252-19382271 None:intergenic 50.0%
CTCAGGAATCAGCGCAGATT+CGG + chr1_1:19382262-19382281 None:intergenic 50.0%
TGATGTTTGGCAGTGGCTTC+CGG + chr1_1:19382333-19382352 None:intergenic 50.0%
TTGCAAGGTTGGGAGAAAGG+GGG + chr1_1:19382458-19382477 None:intergenic 50.0%
TACTACCTCTTTCCACCACG+CGG - chr1_1:19382667-19382686 Msa0012720:intron 50.0%
CTAGATATGGTGAGGAGGAC+GGG + chr1_1:19382721-19382740 None:intergenic 50.0%
GCTAGATATGGTGAGGAGGA+CGG + chr1_1:19382722-19382741 None:intergenic 50.0%
GGTAGCTAGATATGGTGAGG+AGG + chr1_1:19382726-19382745 None:intergenic 50.0%
CGTTGTTGGGAAAGTGGTGT+TGG + chr1_1:19382790-19382809 None:intergenic 50.0%
!! ATGAGGCGTTGTTGGGAAAG+TGG + chr1_1:19382796-19382815 None:intergenic 50.0%
GTTGGGGGTTAGACAGTTGA+AGG + chr1_1:19382825-19382844 None:intergenic 50.0%
!! AAAGAAGTACGGTGGGTTGG+GGG + chr1_1:19382840-19382859 None:intergenic 50.0%
! GCAAAAGAAGTACGGTGGGT+TGG + chr1_1:19382843-19382862 None:intergenic 50.0%
AAATCTCTTGGGTAGGGTGG+AGG + chr1_1:19382877-19382896 None:intergenic 50.0%
GGAAAATCTCTTGGGTAGGG+TGG + chr1_1:19382880-19382899 None:intergenic 50.0%
TTTGTTGCAGAAGGAGCAGG+AGG - chr1_1:19383533-19383552 Msa0012720:intron 50.0%
GTATTGTCCTGGGAGTGACT+TGG - chr1_1:19384985-19385004 Msa0012720:intron 50.0%
! TTGTCTCTGGGCTTTGGTGA+TGG + chr1_1:19385427-19385446 None:intergenic 50.0%
AGGCAATTGTCTCTGGGCTT+TGG + chr1_1:19385433-19385452 None:intergenic 50.0%
CCATATGACCAGGAGGCAGT+GGG + chr1_1:19378711-19378730 None:intergenic 55.0%
CCACTGCCTCCTGGTCATAT+GGG - chr1_1:19378709-19378728 Msa0012720:intron 55.0%
TGCCTCCTGGTCATATGGGA+TGG - chr1_1:19378713-19378732 Msa0012720:intron 55.0%
AGTGGCCATCCCATATGACC+AGG + chr1_1:19378721-19378740 None:intergenic 55.0%
GGAAGACGGTTGGAAACCTG+AGG - chr1_1:19380004-19380023 Msa0012720:intron 55.0%
CGGTTGGAAACCTGAGGATG+AGG - chr1_1:19380010-19380029 Msa0012720:intron 55.0%
! TGGTGGTGCGTGAATTGCAG+AGG + chr1_1:19380829-19380848 None:intergenic 55.0%
CCTACGCAAGGGATTTAGGG+TGG + chr1_1:19380932-19380951 None:intergenic 55.0%
CCACCCTAAATCCCTTGCGT+AGG - chr1_1:19380929-19380948 Msa0012720:intron 55.0%
GGGTCCTACGCAAGGGATTT+AGG + chr1_1:19380936-19380955 None:intergenic 55.0%
AGACTACAAGGGATCGGAGG+AGG + chr1_1:19380975-19380994 None:intergenic 55.0%
CCAAGACTACAAGGGATCGG+AGG + chr1_1:19380978-19380997 None:intergenic 55.0%
CCTCCGATCCCTTGTAGTCT+TGG - chr1_1:19380975-19380994 Msa0012720:intron 55.0%
GGCCATTAACAGACACCAGC+CGG + chr1_1:19381398-19381417 None:intergenic 55.0%
ATGGCCTCACTTTCCCATGG+TGG - chr1_1:19381412-19381431 Msa0012720:intron 55.0%
TGGCCTCACTTTCCCATGGT+GGG - chr1_1:19381413-19381432 Msa0012720:intron 55.0%
TGCTTGTGCGTGTCTGGCTA+TGG + chr1_1:19382110-19382129 None:intergenic 55.0%
!! CGTCATTTTGGCGTGATCGG+TGG + chr1_1:19382565-19382584 None:intergenic 55.0%
!! AAGTCGGTTTGAGGGGTGTG+TGG + chr1_1:19382615-19382634 None:intergenic 55.0%
ATTAGGGATGGGGTAGGTGG+TGG + chr1_1:19382644-19382663 None:intergenic 55.0%
! ATGTTCCGCGTGGTGGAAAG+AGG + chr1_1:19382675-19382694 None:intergenic 55.0%
TGGAGGGGAGTGAGGATCAT+AGG + chr1_1:19382901-19382920 None:intergenic 55.0%
ACCTGATGGAGCCTTGACGA+AGG - chr1_1:19382960-19382979 Msa0012720:intron 55.0%
TCCTTCGTCAAGGCTCCATC+AGG + chr1_1:19382964-19382983 None:intergenic 55.0%
CCCACTGCCTCCTGGTCATA+TGG - chr1_1:19378708-19378727 Msa0012720:intron 60.0%
CCCATATGACCAGGAGGCAG+TGG + chr1_1:19378712-19378731 None:intergenic 60.0%
GGCCATCCCATATGACCAGG+AGG + chr1_1:19378718-19378737 None:intergenic 60.0%
ACGTGTGGGGTCCTACGCAA+GGG + chr1_1:19380943-19380962 None:intergenic 60.0%
AACGTGTGGGGTCCTACGCA+AGG + chr1_1:19380944-19380963 None:intergenic 60.0%
GGCCTCTTCGATACGCCTTG+TGG + chr1_1:19381700-19381719 None:intergenic 60.0%
GTCTGGCTATGGTCAGGTGG+AGG + chr1_1:19382099-19382118 None:intergenic 60.0%
CGTGTCTGGCTATGGTCAGG+TGG + chr1_1:19382102-19382121 None:intergenic 60.0%
GTGCGTGTCTGGCTATGGTC+AGG + chr1_1:19382105-19382124 None:intergenic 60.0%
TCGGGAGGTCACTCTGTTCG+TGG + chr1_1:19382305-19382324 None:intergenic 60.0%
ACGAACAGAGTGACCTCCCG+AGG - chr1_1:19382304-19382323 Msa0012720:intron 60.0%
AGGTTGGGAGAAAGGGGGAG+AGG + chr1_1:19382453-19382472 None:intergenic 60.0%
! TTGAGGGGTGTGTGGTGTGG+CGG + chr1_1:19382607-19382626 None:intergenic 60.0%
! GGTTTGAGGGGTGTGTGGTG+TGG + chr1_1:19382610-19382629 None:intergenic 60.0%
!! GTGCGGCAAGTCGGTTTGAG+GGG + chr1_1:19382622-19382641 None:intergenic 60.0%
!! GGTGCGGCAAGTCGGTTTGA+GGG + chr1_1:19382623-19382642 None:intergenic 60.0%
!! TGGTGCGGCAAGTCGGTTTG+AGG + chr1_1:19382624-19382643 None:intergenic 60.0%
! TAGGTGGTGGTGCGGCAAGT+CGG + chr1_1:19382631-19382650 None:intergenic 60.0%
TCCACCACGCGGAACATCTC+TGG - chr1_1:19382678-19382697 Msa0012720:intron 60.0%
AGGACGGGAGGTTGGAGGAT+GGG + chr1_1:19382706-19382725 None:intergenic 60.0%
GATATGGTGAGGAGGACGGG+AGG + chr1_1:19382718-19382737 None:intergenic 60.0%
GAGGCGTGCTTGTGCGTGTC+TGG + chr1_1:19382116-19382135 None:intergenic 65.0%
! GAGTGACCTCCCGAGGTGTC+CGG - chr1_1:19382311-19382330 Msa0012720:intron 65.0%
CAGTGGCTTCCGGACACCTC+GGG + chr1_1:19382323-19382342 None:intergenic 65.0%
GCAGTGGCTTCCGGACACCT+CGG + chr1_1:19382324-19382343 None:intergenic 65.0%
GTGGTGTGGCGGTTGGGTGA+TGG + chr1_1:19382596-19382615 None:intergenic 65.0%
GGGTGTGTGGTGTGGCGGTT+GGG + chr1_1:19382602-19382621 None:intergenic 65.0%
! GGATGGGGTAGGTGGTGGTG+CGG + chr1_1:19382639-19382658 None:intergenic 65.0%
GCCAGAGATGTTCCGCGTGG+TGG + chr1_1:19382682-19382701 None:intergenic 65.0%
GACGGGAGGTTGGAGGATGG+GGG + chr1_1:19382704-19382723 None:intergenic 65.0%
GGACGGGAGGTTGGAGGATG+GGG + chr1_1:19382705-19382724 None:intergenic 65.0%
GAGGACGGGAGGTTGGAGGA+TGG + chr1_1:19382707-19382726 None:intergenic 65.0%
TGAGGAGGACGGGAGGTTGG+AGG + chr1_1:19382711-19382730 None:intergenic 65.0%
TGGTGAGGAGGACGGGAGGT+TGG + chr1_1:19382714-19382733 None:intergenic 65.0%
TGGCTTCCGGACACCTCGGG+AGG + chr1_1:19382320-19382339 None:intergenic 70.0%
GGGAGAAAGGGGGAGAGGCG+TGG + chr1_1:19382448-19382467 None:intergenic 70.0%
GGGGTGTGTGGTGTGGCGGT+TGG + chr1_1:19382603-19382622 None:intergenic 70.0%
GGGGCCAGAGATGTTCCGCG+TGG + chr1_1:19382685-19382704 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 19378164 19385691 19378164 ID=Msa0012720;Name=Msa0012720
chr1_1 mRNA 19378164 19385691 19378164 ID=Msa0012720-mRNA-1;Parent=Msa0012720;Name=Msa0012720-mRNA-1;_AED=0.12;_eAED=0.12;_QI=431|1|1|1|1|1|8|208|485
chr1_1 exon 19378164 19378471 19378164 ID=Msa0012720-mRNA-1:exon:7048;Parent=Msa0012720-mRNA-1
chr1_1 exon 19378799 19378920 19378799 ID=Msa0012720-mRNA-1:exon:7047;Parent=Msa0012720-mRNA-1
chr1_1 exon 19379476 19379582 19379476 ID=Msa0012720-mRNA-1:exon:7046;Parent=Msa0012720-mRNA-1
chr1_1 exon 19379682 19379760 19379682 ID=Msa0012720-mRNA-1:exon:7045;Parent=Msa0012720-mRNA-1
chr1_1 exon 19380223 19380312 19380223 ID=Msa0012720-mRNA-1:exon:7044;Parent=Msa0012720-mRNA-1
chr1_1 exon 19383707 19383961 19383707 ID=Msa0012720-mRNA-1:exon:7043;Parent=Msa0012720-mRNA-1
chr1_1 exon 19384086 19384566 19384086 ID=Msa0012720-mRNA-1:exon:7042;Parent=Msa0012720-mRNA-1
chr1_1 exon 19385037 19385691 19385037 ID=Msa0012720-mRNA-1:exon:7041;Parent=Msa0012720-mRNA-1
chr1_1 five_prime_UTR 19385261 19385691 19385261 ID=Msa0012720-mRNA-1:five_prime_utr;Parent=Msa0012720-mRNA-1
chr1_1 CDS 19385037 19385260 19385037 ID=Msa0012720-mRNA-1:cds;Parent=Msa0012720-mRNA-1
chr1_1 CDS 19384086 19384566 19384086 ID=Msa0012720-mRNA-1:cds;Parent=Msa0012720-mRNA-1
chr1_1 CDS 19383707 19383961 19383707 ID=Msa0012720-mRNA-1:cds;Parent=Msa0012720-mRNA-1
chr1_1 CDS 19380223 19380312 19380223 ID=Msa0012720-mRNA-1:cds;Parent=Msa0012720-mRNA-1
chr1_1 CDS 19379682 19379760 19379682 ID=Msa0012720-mRNA-1:cds;Parent=Msa0012720-mRNA-1
chr1_1 CDS 19379476 19379582 19379476 ID=Msa0012720-mRNA-1:cds;Parent=Msa0012720-mRNA-1
chr1_1 CDS 19378799 19378920 19378799 ID=Msa0012720-mRNA-1:cds;Parent=Msa0012720-mRNA-1
chr1_1 CDS 19378372 19378471 19378372 ID=Msa0012720-mRNA-1:cds;Parent=Msa0012720-mRNA-1
chr1_1 three_prime_UTR 19378164 19378371 19378164 ID=Msa0012720-mRNA-1:three_prime_utr;Parent=Msa0012720-mRNA-1
Gene Sequence

>Msa0012720

ATGGAAATACAATACTGGGTTTGGATGTGTGCCATATGCTATTTTTGTTTGATCAATTTTATGAGGAGATTAACTGAGTGGTATTATAATATGAAACTTAGAAAGATACAATACCCACTGCCTCCTGGTCATATGGGATGGCCACTTATTGGCAATATGTTGACCTTTGTTAAAGATTTCTCATCAGGCCATCCTGATTCATTCATCAACAACCTTGTTTCCAGGTATGGAAGAACTGGTATCTACAAGTCACACTTGTTTGGGAGTCCAAGCATCATCATTTGTGATGCTGATATGTGTAGGCAAGTGCTAACAAACGATGAGACTTTTAAGATCGGTTATCCAAAATCCACTATGGAAGTGATGAGATGTAAATTCTTTTGGAGATCATCTCAAGAAGAACATAAGCGTATGAGACGCTTAATCTCAGTTCTTACCATGGGCCACAATACATTAGAAATGTACCTAACTCGTATGGAAGACATTGTGATCAATTCTTTGGAGGAAATATCTAGTATGAATCACCCAGTGGAGTTTTTGAAAGAGATGAAGAATATTTCCTTTAAAGTAATCATCGATATTCTTATAGGCTCTTACAATCAACACATCATTACTAAAATAGGGAATTCCTTTACTGAAATTTATAGTGCTCTATTCTCTATGCCCATTAACCTTCCTGGTTTTGCTTTCCATAAAGGACTCCTGGCACGTGAGAAGCTGTCCAAATTATTTCAACCTATCGTAGAAGAAAGGAGGTTGATGAAAACAAACAGTAACAAAAAAGATTTGCTTGATAATATTCTGGAATTGAAAGAGGAAGACGGTTGGAAACCTGAGGATGAGGACATTATTGACATGTTGATAGGTTTTGTACTTGCTGGTCATGAAGCCATAGCAACCGGTATGATGTGGGCAATTATATATCTCACGCAGAATCCACATATTTTGAAAAGAGCCAAGAAGGAGCAGGAGGAAATCATGAAGAGAAGAATGGCCACGCAAAAAGTATTAAGTCTTAATGAGATTAAACAAATGGTTTATCTTTCTCATGTAATCAATGAAATGTTACGCCTTGTGAGTATAAACTTCGCAAGTTTTCGAGAGGCAAAAAGAGATGTTACCATCAATGGTTATATAATACCGAAAGGATGGAAAGTGTTACCTTGGTTAAGAGCTATTCACATGGATCCTACATATTATCCGAATTCGGGTGAATTTAACCCATCAAGATGGGATGATCACAATGCCAAAGTTGGGACCTTCCTTTCTTTTGGAGCAGGAAGTATGTATTGTCCTGGGAGTGACTTGGCAAAAATTGAAATTTCCGTATTTCTACATCATTTCCTTCTTAATTACAAGCTGGAGCGAGTAAATCCAGACTGTCCTATTACTAGCTTACCATCACCAAAGCCCAGAGACAATTGCCTTGCTAAGGTGATAAAGGTTTCAAGTGCATAG
Protein sequence

>Msa0012720

MEIQYWVWMCAICYFCLINFMRRLTEWYYNMKLRKIQYPLPPGHMGWPLIGNMLTFVKDFSSGHPDSFINNLVSRYGRTGIYKSHLFGSPSIIICDADMCRQVLTNDETFKIGYPKSTMEVMRCKFFWRSSQEEHKRMRRLISVLTMGHNTLEMYLTRMEDIVINSLEEISSMNHPVEFLKEMKNISFKVIIDILIGSYNQHIITKIGNSFTEIYSALFSMPINLPGFAFHKGLLAREKLSKLFQPIVEERRLMKTNSNKKDLLDNILELKEEDGWKPEDEDIIDMLIGFVLAGHEAIATGMMWAIIYLTQNPHILKRAKKEQEEIMKRRMATQKVLSLNEIKQMVYLSHVINEMLRLVSINFASFREAKRDVTINGYIIPKGWKVLPWLRAIHMDPTYYPNSGEFNPSRWDDHNAKVGTFLSFGAGSMYCPGSDLAKIEISVFLHHFLLNYKLERVNPDCPITSLPSPKPRDNCLAKVIKVSSA*