AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0014300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0014300 MtrunA17_Chr1g0164371 95.188 478 23 0 1 478 1 478 0.0 875
Msa0014300 MtrunA17_Chr5g0408181 55.864 469 193 7 11 477 8 464 0.0 526
Msa0014300 MtrunA17_Chr8g0369791 57.339 436 178 4 44 477 37 466 0.0 516
Msa0014300 MtrunA17_Chr4g0044851 55.928 447 193 3 29 472 21 466 0.0 515
Msa0014300 MtrunA17_Chr4g0044841 56.027 448 192 4 29 472 22 468 6.08e-178 507
Msa0014300 MtrunA17_Chr1g0153371 52.553 470 209 6 12 472 1 465 3.41e-174 498
Msa0014300 MtrunA17_Chr7g0219961 32.548 467 296 9 18 474 4 461 4.07e-81 259
Msa0014300 MtrunA17_Chr3g0107511 32.211 475 302 7 15 473 4 474 4.89e-78 251
Msa0014300 MtrunA17_Chr6g0455461 30.556 468 305 9 18 474 4 462 5.36e-76 246
Msa0014300 MtrunA17_Chr5g0400421 31.906 467 302 10 22 473 22 487 2.24e-75 244
Msa0014300 MtrunA17_Chr5g0400411 34.261 467 290 10 22 473 22 486 3.68e-75 244
Msa0014300 MtrunA17_Chr3g0107501 33.259 451 283 9 38 473 27 474 6.41e-75 243
Msa0014300 MtrunA17_Chr3g0078411 29.915 468 308 9 18 474 4 462 1.13e-74 242
Msa0014300 MtrunA17_Chr5g0403931 32.143 448 280 9 44 473 36 477 3.88e-74 241
Msa0014300 MtrunA17_Chr2g0293421 30.803 461 301 8 21 465 19 477 7.58e-74 241
Msa0014300 MtrunA17_Chr7g0226771 32.640 481 290 15 20 477 7 476 8.24e-74 240
Msa0014300 MtrunA17_Chr8g0381571 33.713 439 258 10 34 447 30 460 3.20e-73 239
Msa0014300 MtrunA17_Chr8g0381541 33.333 447 266 10 30 452 27 465 3.53e-73 239
Msa0014300 MtrunA17_Chr3g0113321 29.213 445 292 9 44 473 29 465 1.56e-72 237
Msa0014300 MtrunA17_Chr2g0293411 30.498 482 306 10 20 478 14 489 1.61e-72 237
Msa0014300 MtrunA17_Chr3g0141801 30.608 477 303 10 18 473 12 481 1.52e-71 235
Msa0014300 MtrunA17_Chr8g0372411 30.682 440 292 7 45 474 40 476 2.54e-71 234
Msa0014300 MtrunA17_Chr8g0341951 31.894 417 265 7 44 448 37 446 3.10e-71 233
Msa0014300 MtrunA17_Chr8g0388921 31.489 470 302 10 20 473 9 474 1.97e-70 231
Msa0014300 MtrunA17_Chr5g0443401 30.417 480 305 13 19 476 5 477 3.96e-68 225
Msa0014300 MtrunA17_Chr3g0089361 30.580 448 282 12 44 474 40 475 2.36e-65 218
Msa0014300 MtrunA17_Chr5g0397971 29.462 465 316 8 21 476 9 470 2.81e-65 218
Msa0014300 MtrunA17_Chr6g0478161 29.079 478 311 10 16 474 20 488 2.89e-64 216
Msa0014300 MtrunA17_Chr8g0380471 29.764 467 310 10 20 473 12 473 3.81e-63 212
Msa0014300 MtrunA17_Chr8g0372711 28.238 471 319 8 19 476 19 483 4.82e-63 212
Msa0014300 MtrunA17_Chr5g0443731 30.176 454 291 9 42 477 27 472 2.38e-62 210
Msa0014300 MtrunA17_Chr8g0339861 30.330 455 290 12 38 474 39 484 2.25e-59 202
Msa0014300 MtrunA17_Chr8g0373441 30.508 413 257 10 10 407 7 404 3.96e-56 192
Msa0014300 MtrunA17_Chr8g0380931 27.416 445 308 11 42 473 60 502 5.13e-54 189
Msa0014300 MtrunA17_Chr3g0089351 27.792 403 274 7 79 474 1 393 9.11e-54 185
Msa0014300 MtrunA17_Chr5g0404861 41.401 157 87 2 320 473 2 156 2.26e-35 129
Msa0014300 MtrunA17_Chr8g0381551 29.412 306 185 9 30 312 27 324 4.88e-31 122
Msa0014300 MtrunA17_Chr6g0463551 32.778 180 114 3 199 372 11 189 1.29e-29 115
Msa0014300 MtrunA17_Chr1g0174481 26.464 461 281 17 38 454 28 474 5.15e-28 116
Msa0014300 MtrunA17_Chr8g0381561 45.455 110 59 1 339 447 2 111 2.72e-27 106
Msa0014300 MtrunA17_Chr1g0174451 25.277 451 289 11 45 454 37 480 3.42e-27 114
Msa0014300 MtrunA17_Chr1g0174441 24.635 479 308 16 23 454 29 501 7.85e-27 113
Msa0014300 MtrunA17_Chr8g0382901 24.017 458 307 14 19 450 1 443 3.06e-26 112
Msa0014300 MtrunA17_Chr8g0382901 22.366 465 318 15 19 450 468 922 2.28e-21 97.8
Msa0014300 MtrunA17_Chr4g0000151 39.062 128 76 2 339 465 5 131 4.73e-26 103
Msa0014300 MtrunA17_Chr7g0235261 25.806 403 264 11 73 447 85 480 1.11e-25 109
Msa0014300 MtrunA17_Chr1g0161671 26.990 289 195 7 38 312 23 309 1.20e-25 107
Msa0014300 MtrunA17_Chr6g0458561 25.102 490 300 20 14 450 22 497 2.58e-25 108
Msa0014300 MtrunA17_Chr3g0116741 25.207 484 311 15 13 458 21 491 3.43e-25 108
Msa0014300 MtrunA17_Chr2g0310391 23.355 471 303 16 18 444 3 459 3.75e-25 108
Msa0014300 MtrunA17_Chr2g0310381 24.242 462 302 17 18 440 3 455 4.74e-25 107
Msa0014300 MtrunA17_Chr3g0084921 25.709 494 310 15 12 457 2 486 8.03e-25 107
Msa0014300 MtrunA17_Chr8g0339331 24.672 458 280 16 45 450 40 484 9.25e-25 107
Msa0014300 MtrunA17_Chr8g0362731 25.916 382 233 14 104 450 15 381 1.88e-24 105
Msa0014300 MtrunA17_Chr4g0000171 27.018 285 187 10 38 307 37 315 1.92e-24 103
Msa0014300 MtrunA17_Chr5g0436981 32.317 164 104 4 37 195 22 183 3.52e-24 99.8
Msa0014300 MtrunA17_Chr4g0000161 26.761 284 189 8 38 307 37 315 3.56e-24 103
Msa0014300 MtrunA17_Chr7g0258221 24.180 488 312 17 14 457 7 480 4.22e-24 105
Msa0014300 MtrunA17_Chr5g0404881 29.148 223 140 5 24 232 11 229 4.47e-24 100
Msa0014300 MtrunA17_Chr5g0403321 23.884 448 299 13 41 450 31 474 4.91e-24 105
Msa0014300 MtrunA17_Chr6g0463541 42.453 106 61 0 368 473 2 107 5.95e-24 96.3
Msa0014300 MtrunA17_Chr5g0405001 22.718 471 321 9 17 450 17 481 9.12e-24 104
Msa0014300 MtrunA17_Chr5g0437001 43.519 108 57 1 340 443 1 108 1.41e-23 97.1
Msa0014300 MtrunA17_Chr5g0403351 23.382 479 310 17 14 450 8 471 6.60e-23 101
Msa0014300 MtrunA17_Chr4g0058231 23.967 484 304 19 18 452 3 471 8.47e-23 101
Msa0014300 MtrunA17_Chr3g0101611 24.053 449 291 17 44 453 38 475 2.69e-22 99.8
Msa0014300 MtrunA17_Chr3g0101671 23.044 473 313 14 18 450 12 473 3.42e-22 99.4
Msa0014300 MtrunA17_Chr1g0200961 25.478 471 300 17 20 450 6 465 4.01e-22 99.0
Msa0014300 MtrunA17_Chr4g0035921 22.517 453 295 12 45 450 38 481 5.57e-22 99.0
Msa0014300 MtrunA17_Chr4g0004601 25.408 429 254 19 90 474 123 529 5.99e-22 99.0
Msa0014300 MtrunA17_Chr1g0174471 22.366 465 300 13 38 454 44 495 6.65e-22 98.6
Msa0014300 MtrunA17_Chr7g0235551 24.948 481 306 14 19 454 9 479 7.27e-22 98.6
Msa0014300 MtrunA17_Chr8g0334891 24.612 451 286 15 42 463 36 461 8.30e-22 98.2
Msa0014300 MtrunA17_Chr1g0160851 25.207 484 297 17 14 452 4 467 9.24e-22 98.2
Msa0014300 MtrunA17_Chr5g0445381 22.318 466 328 16 14 450 39 499 1.04e-21 98.2
Msa0014300 MtrunA17_Chr3g0116681 24.681 470 307 15 17 450 13 471 1.09e-21 97.8
Msa0014300 MtrunA17_Chr5g0431511 24.051 474 308 17 44 478 33 493 1.42e-21 97.4
Msa0014300 MtrunA17_Chr8g0390881 23.125 480 319 16 15 453 5 475 1.95e-21 97.1
Msa0014300 MtrunA17_Chr4g0076161 22.453 481 321 15 12 450 1 471 2.09e-21 97.1
Msa0014300 MtrunA17_Chr8g0361471 24.262 474 310 14 16 450 6 469 3.29e-21 96.3
Msa0014300 MtrunA17_Chr7g0218601 23.025 443 296 11 44 450 34 467 3.52e-21 96.3
Msa0014300 MtrunA17_Chr3g0128461 23.210 405 268 11 68 439 92 486 4.81e-21 95.9
Msa0014300 MtrunA17_Chr8g0362701 25.225 444 269 16 60 454 50 479 4.84e-21 95.9
Msa0014300 MtrunA17_Chr1g0162811 23.256 473 311 15 18 450 8 468 5.19e-21 95.9
Msa0014300 MtrunA17_Chr1g0162801 23.926 489 304 19 12 450 1 471 5.63e-21 95.9
Msa0014300 MtrunA17_Chr4g0013471 25.753 299 189 10 44 321 43 329 6.51e-21 94.7
Msa0014300 MtrunA17_Chr8g0346261 24.009 454 288 15 46 458 86 523 6.82e-21 95.5
Msa0014300 MtrunA17_Chr5g0431501 24.324 444 293 13 44 450 33 470 8.52e-21 95.1
Msa0014300 MtrunA17_Chr5g0431461 24.324 444 293 13 44 450 33 470 8.52e-21 95.1
Msa0014300 MtrunA17_Chr1g0198191 22.699 489 316 16 16 459 23 494 2.31e-20 94.0
Msa0014300 MtrunA17_Chr6g0465511 23.840 474 312 15 16 450 6 469 2.32e-20 94.0
Msa0014300 MtrunA17_Chr4g0058201 23.799 458 309 15 34 458 18 468 2.46e-20 93.6
Msa0014300 MtrunA17_Chr3g0101731 22.796 465 317 13 22 450 11 469 2.64e-20 93.6
Msa0014300 MtrunA17_Chr4g0057001 23.596 445 292 15 44 450 50 484 2.64e-20 93.6
Msa0014300 MtrunA17_Chr4g0011961 24.576 472 309 19 16 450 2 463 3.43e-20 93.2
Msa0014300 MtrunA17_Chr4g0011901 23.371 445 292 13 45 450 30 464 3.63e-20 93.2
Msa0014300 MtrunA17_Chr7g0218611 23.831 449 299 12 38 450 27 468 3.98e-20 93.2
Msa0014300 MtrunA17_Chr8g0362481 23.923 418 251 14 88 454 9 410 4.38e-20 92.4
Msa0014300 MtrunA17_Chr6g0466901 24.153 472 301 18 12 431 1 467 4.97e-20 92.8
Msa0014300 MtrunA17_Chr2g0286091 22.912 467 319 14 39 471 36 495 5.27e-20 92.8
Msa0014300 MtrunA17_Chr4g0074581 23.166 518 306 18 3 453 24 516 5.36e-20 92.8
Msa0014300 MtrunA17_Chr6g0466331 23.840 474 312 15 16 450 6 469 7.41e-20 92.4
Msa0014300 MtrunA17_Chr6g0451681 24.229 454 271 18 15 446 36 438 1.10e-19 91.7
Msa0014300 MtrunA17_Chr6g0463801 24.374 439 286 14 44 448 37 463 1.15e-19 91.7
Msa0014300 MtrunA17_Chr0c19g0493771 31.016 187 117 4 272 451 440 621 1.23e-19 92.0
Msa0014300 MtrunA17_Chr1g0203141 24.658 438 287 16 68 473 86 512 1.55e-19 91.3
Msa0014300 MtrunA17_Chr5g0445461 23.044 473 320 18 10 450 8 468 1.58e-19 91.3
Msa0014300 MtrunA17_Chr4g0046321 24.221 417 273 15 74 452 65 476 1.64e-19 91.3
Msa0014300 MtrunA17_Chr5g0446151 22.779 439 297 13 44 450 41 469 1.66e-19 91.3
Msa0014300 MtrunA17_Chr1g0213671 26.682 446 280 17 44 448 34 473 1.97e-19 90.9
Msa0014300 MtrunA17_Chr3g0101631 22.796 465 315 13 19 450 11 464 1.99e-19 90.9
Msa0014300 MtrunA17_Chr4g0011981 24.070 457 297 15 33 450 19 464 2.05e-19 90.9
Msa0014300 MtrunA17_Chr3g0101721 21.951 451 296 14 44 452 37 473 2.42e-19 90.9
Msa0014300 MtrunA17_Chr5g0445451 23.044 473 320 18 10 450 8 468 2.65e-19 90.5
Msa0014300 MtrunA17_Chr4g0058191 22.708 480 316 17 18 458 3 466 3.25e-19 90.1
Msa0014300 MtrunA17_Chr1g0154731 24.113 423 282 15 76 471 88 498 3.68e-19 90.1
Msa0014300 MtrunA17_Chr1g0160861 32.768 177 107 4 283 452 137 308 4.48e-19 88.2
Msa0014300 MtrunA17_Chr1g0174461 22.245 490 316 12 16 454 4 479 4.56e-19 89.7
Msa0014300 MtrunA17_Chr8g0356001 24.066 482 326 12 1 450 1 474 6.95e-19 89.4
Msa0014300 MtrunA17_Chr3g0101821 21.308 474 322 12 16 450 8 469 7.48e-19 89.4
Msa0014300 MtrunA17_Chr4g0046331 23.113 424 271 14 74 452 65 478 7.82e-19 89.4
Msa0014300 MtrunA17_Chr3g0101571 22.398 442 298 17 44 450 36 467 1.07e-18 88.6
Msa0014300 MtrunA17_Chr4g0046351 22.454 432 282 14 74 462 65 486 1.17e-18 88.6
Msa0014300 MtrunA17_Chr6g0457421 25.240 416 257 14 101 476 104 505 1.17e-18 88.6
Msa0014300 MtrunA17_Chr5g0395321 21.983 464 325 12 12 450 14 465 1.71e-18 88.2
Msa0014300 MtrunA17_Chr3g0101661 22.973 444 300 14 44 452 38 474 1.71e-18 88.2
Msa0014300 MtrunA17_Chr8g0372251 23.040 421 280 12 45 427 36 450 1.84e-18 88.2
Msa0014300 MtrunA17_Chr3g0101601 23.176 466 313 14 19 450 11 465 2.43e-18 87.4
Msa0014300 MtrunA17_Chr5g0445441 22.718 471 324 17 10 450 49 509 2.89e-18 87.4
Msa0014300 MtrunA17_Chr1g0161641 47.368 76 39 1 373 447 13 88 2.96e-18 79.7
Msa0014300 MtrunA17_Chr5g0401681 22.059 476 309 16 19 452 8 463 2.96e-18 87.4
Msa0014300 MtrunA17_Chr1g0205371 24.416 471 312 16 18 453 8 469 3.08e-18 87.4
Msa0014300 MtrunA17_Chr4g0058281 22.428 486 325 17 14 458 15 489 3.25e-18 87.4
Msa0014300 MtrunA17_Chr5g0445421 20.638 470 330 14 1 450 75 521 5.13e-18 86.7
Msa0014300 MtrunA17_Chr5g0446161 22.199 482 323 16 7 450 1 468 7.83e-18 85.9
Msa0014300 MtrunA17_Chr5g0395381 21.351 459 325 12 4 450 6 440 9.70e-18 85.5
Msa0014300 MtrunA17_Chr5g0406651 21.616 458 321 12 27 450 12 465 1.12e-17 85.5
Msa0014300 MtrunA17_Chr4g0063221 22.474 485 305 17 20 444 17 490 1.35e-17 85.5
Msa0014300 MtrunA17_Chr5g0413911 23.871 465 299 17 44 455 42 504 1.46e-17 85.5
Msa0014300 MtrunA17_Chr8g0334941 26.042 288 179 7 194 463 35 306 1.70e-17 83.6
Msa0014300 MtrunA17_Chr7g0215181 28.731 268 163 10 224 476 253 507 1.82e-17 85.1
Msa0014300 MtrunA17_Chr3g0101581 23.176 466 316 17 19 450 13 470 1.96e-17 84.7
Msa0014300 MtrunA17_Chr7g0246221 20.975 472 322 15 26 458 17 476 1.99e-17 84.7
Msa0014300 MtrunA17_Chr4g0030701 22.410 473 299 15 35 453 25 483 2.45e-17 84.7
Msa0014300 MtrunA17_Chr8g0377341 23.444 482 311 19 7 448 32 495 3.94e-17 84.0
Msa0014300 MtrunA17_Chr3g0101801 21.294 479 338 12 5 450 4 476 4.87e-17 83.6
Msa0014300 MtrunA17_Chr4g0047661 23.251 486 315 17 16 458 20 490 9.14e-17 82.8
Msa0014300 MtrunA17_Chr4g0011921 24.000 475 311 15 14 450 2 464 9.23e-17 82.8
Msa0014300 MtrunA17_Chr5g0395331 22.573 443 300 10 44 450 37 472 1.22e-16 82.4
Msa0014300 MtrunA17_Chr1g0205361 23.596 445 293 16 44 452 34 467 1.24e-16 82.4
Msa0014300 MtrunA17_Chr7g0258211 21.789 436 284 14 69 458 63 487 1.30e-16 82.4
Msa0014300 MtrunA17_Chr4g0047641 23.305 472 320 15 16 450 18 484 1.32e-16 82.4
Msa0014300 MtrunA17_Chr4g0058211 29.348 184 120 4 281 458 15 194 1.82e-16 78.2
Msa0014300 MtrunA17_Chr1g0179811 27.037 270 164 8 228 474 278 537 2.01e-16 81.6
Msa0014300 MtrunA17_Chr3g0101691 21.868 471 321 15 18 450 12 473 2.08e-16 81.6
Msa0014300 MtrunA17_Chr8g0357431 22.553 470 321 14 18 450 7 470 2.21e-16 81.6
Msa0014300 MtrunA17_Chr8g0351801 23.659 317 181 11 174 456 203 492 2.33e-16 81.6
Msa0014300 MtrunA17_Chr5g0396521 25.926 270 150 9 234 458 286 550 3.61e-16 81.3
Msa0014300 MtrunA17_Chr5g0403331 22.708 480 322 18 12 450 1 472 3.86e-16 80.9
Msa0014300 MtrunA17_Chr2g0296661 23.223 422 271 13 69 449 56 465 4.66e-16 80.5
Msa0014300 MtrunA17_Chr5g0419451 24.112 394 252 15 90 448 105 486 5.33e-16 80.5
Msa0014300 MtrunA17_Chr6g0463561 27.746 173 116 3 11 178 9 177 5.41e-16 76.6
Msa0014300 MtrunA17_Chr4g0056951 23.404 423 276 15 67 450 66 479 5.52e-16 80.5
Msa0014300 MtrunA17_Chr1g0164211 23.179 453 285 15 44 452 31 464 5.91e-16 80.1
Msa0014300 MtrunA17_Chr6g0479681 23.128 454 290 17 68 473 84 526 6.83e-16 80.1
Msa0014300 MtrunA17_Chr1g0174431 29.444 180 111 4 288 455 4 179 7.93e-16 76.3
Msa0014300 MtrunA17_Chr3g0101651 21.308 474 324 15 18 452 12 475 8.38e-16 79.7
Msa0014300 MtrunA17_Chr2g0280261 21.445 443 311 10 44 460 34 465 1.19e-15 79.3
Msa0014300 MtrunA17_Chr4g0011881 23.340 467 302 16 25 450 13 464 1.46e-15 79.0
Msa0014300 MtrunA17_Chr5g0401691 22.917 480 317 17 10 452 17 480 1.51e-15 79.0
Msa0014300 MtrunA17_Chr5g0430081 21.776 473 328 16 16 453 8 473 1.61e-15 79.0
Msa0014300 MtrunA17_Chr6g0463791 22.056 467 324 14 18 450 7 467 1.86e-15 78.6
Msa0014300 MtrunA17_Chr4g0030711 21.963 428 285 12 69 451 61 484 2.06e-15 78.6
Msa0014300 MtrunA17_Chr5g0430031 20.408 441 310 15 45 450 38 472 2.08e-15 78.6
Msa0014300 MtrunA17_Chr1g0200951 22.407 482 293 19 28 448 36 497 2.13e-15 78.6
Msa0014300 MtrunA17_Chr5g0400391 43.373 83 46 1 391 472 2 84 4.13e-15 71.2
Msa0014300 MtrunA17_Chr2g0314731 21.774 496 339 16 14 474 3 484 4.19e-15 77.4
Msa0014300 MtrunA17_Chr1g0176831 22.984 496 333 18 14 474 33 514 9.09e-15 76.6
Msa0014300 MtrunA17_Chr4g0024771 21.548 478 337 17 1 450 1 468 9.59e-15 76.6
Msa0014300 MtrunA17_Chr8g0370641 23.800 500 302 16 22 458 14 497 1.38e-14 76.3
Msa0014300 MtrunA17_Chr1g0161651 25.566 309 169 9 19 268 12 318 1.60e-14 74.7
Msa0014300 MtrunA17_Chr2g0296651 22.547 479 303 16 22 454 9 465 1.64e-14 75.9
Msa0014300 MtrunA17_Chr5g0419691 23.465 456 298 16 35 450 20 464 1.80e-14 75.5
Msa0014300 MtrunA17_Chr4g0053621 22.458 472 318 17 18 451 5 466 2.81e-14 75.1
Msa0014300 MtrunA17_Chr3g0101741 22.111 398 269 11 90 458 11 396 3.82e-14 74.3
Msa0014300 MtrunA17_Chr3g0089381 25.654 191 125 5 200 382 21 202 3.95e-14 71.6
Msa0014300 MtrunA17_Chr4g0061381 28.049 246 157 8 219 450 232 471 5.05e-14 74.3
Msa0014300 MtrunA17_Chr4g0046681 27.647 170 105 6 284 440 30 194 1.22e-13 70.5
Msa0014300 MtrunA17_Chr4g0011851 28.421 190 120 6 270 450 1 183 1.46e-13 69.7
Msa0014300 MtrunA17_Chr3g0135841 22.020 495 306 16 46 469 44 529 1.52e-13 72.8
Msa0014300 MtrunA17_Chr7g0248991 30.769 143 93 3 272 413 222 359 2.35e-13 71.6
Msa0014300 MtrunA17_Chr4g0052851 22.348 443 305 14 37 453 26 455 2.48e-13 72.0
Msa0014300 MtrunA17_Chr4g0046631 21.477 447 290 15 45 440 46 482 2.91e-13 72.0
Msa0014300 MtrunA17_Chr1g0207841 27.957 186 124 4 274 453 304 485 4.79e-13 71.2
Msa0014300 MtrunA17_Chr5g0446101 24.658 219 152 5 240 450 68 281 5.30e-13 69.7
Msa0014300 MtrunA17_Chr5g0445531 21.364 440 303 15 44 450 38 467 7.30e-13 70.5
Msa0014300 MtrunA17_Chr5g0430131 21.443 485 327 18 12 453 1 474 8.81e-13 70.5
Msa0014300 MtrunA17_Chr8g0387101 23.005 426 287 12 68 454 58 481 1.21e-12 70.1
Msa0014300 MtrunA17_Chr7g0246151 25.523 239 155 8 234 458 246 475 1.24e-12 69.7
Msa0014300 MtrunA17_Chr4g0017411 24.651 215 156 4 240 453 243 452 1.31e-12 69.7
Msa0014300 MtrunA17_Chr4g0039391 25.946 185 128 4 274 453 293 473 1.63e-12 69.7
Msa0014300 MtrunA17_Chr4g0052881 26.554 177 125 3 274 449 289 461 2.44e-12 68.9
Msa0014300 MtrunA17_Chr2g0313791 21.900 379 255 10 87 435 102 469 1.25e-11 66.6
Msa0014300 MtrunA17_Chr5g0402981 31.056 161 94 7 297 446 4 158 2.97e-11 62.8
Msa0014300 MtrunA17_Chr2g0280011 27.933 179 114 4 288 454 11 186 3.07e-11 63.2
Msa0014300 MtrunA17_Chr8g0364631 21.667 480 324 17 44 476 32 506 3.20e-11 65.5
Msa0014300 MtrunA17_Chr2g0280121 21.759 432 286 13 68 454 60 484 3.77e-11 65.1
Msa0014300 MtrunA17_Chr1g0161661 41.270 63 36 1 391 452 14 76 4.63e-11 59.7
Msa0014300 MtrunA17_Chr4g0052861 23.757 181 133 3 274 453 288 464 5.62e-11 64.7
Msa0014300 MtrunA17_Chr8g0354531 22.963 405 256 13 88 453 234 621 7.26e-11 64.7
Msa0014300 MtrunA17_Chr8g0373431 45.902 61 32 1 413 473 4 63 7.99e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0014300 AT2G29090.2 66.143 446 148 3 31 474 36 480 0.0 608
Msa0014300 AT2G29090.1 66.143 446 148 3 31 474 36 480 0.0 608
Msa0014300 AT5G45340.1 56.197 468 196 3 12 476 1 462 0.0 551
Msa0014300 AT4G19230.1 55.983 468 197 4 12 476 1 462 0.0 544
Msa0014300 AT3G19270.2 56.455 457 194 3 16 471 9 461 0.0 530
Msa0014300 AT5G45340.2 56.264 439 183 3 12 447 1 433 2.70e-180 512
Msa0014300 AT2G29090.3 65.285 386 131 3 91 474 1 385 5.08e-180 509
Msa0014300 AT4G19230.2 54.526 464 201 5 12 471 1 458 1.63e-179 512
Msa0014300 AT3G19270.1 56.221 434 185 3 16 448 9 438 1.45e-174 498
Msa0014300 AT2G29090.4 61.672 287 107 3 31 315 36 321 5.36e-117 347
Msa0014300 AT2G32440.2 33.473 478 296 11 16 474 11 485 3.90e-77 249
Msa0014300 AT2G32440.1 33.473 478 296 11 16 474 11 485 3.90e-77 249
Msa0014300 AT1G05160.2 32.960 446 282 8 44 474 45 488 8.98e-77 249
Msa0014300 AT1G05160.1 32.960 446 282 8 44 474 45 488 8.98e-77 249
Msa0014300 AT5G05690.1 32.414 435 265 10 44 461 31 453 1.49e-73 240
Msa0014300 AT5G38970.1 28.976 459 317 7 20 474 10 463 3.56e-73 238
Msa0014300 AT1G19630.1 32.068 474 305 9 14 474 4 473 9.41e-73 238
Msa0014300 AT5G36110.1 31.767 447 281 10 44 473 34 473 1.34e-71 235
Msa0014300 AT3G30180.1 30.377 451 306 7 20 466 10 456 6.36e-71 233
Msa0014300 AT3G13730.1 31.236 445 284 8 44 473 51 488 4.51e-70 231
Msa0014300 AT4G36380.1 30.942 446 291 8 43 474 68 510 4.19e-69 229
Msa0014300 AT1G19630.3 32.215 447 287 8 14 448 4 446 4.16e-68 225
Msa0014300 AT3G13730.2 31.265 419 268 7 44 447 51 464 5.02e-68 225
Msa0014300 AT2G42850.1 31.557 469 283 12 35 478 30 485 6.36e-67 223
Msa0014300 AT3G50660.1 30.290 482 275 12 44 474 39 510 3.93e-64 216
Msa0014300 AT5G05690.2 32.275 378 232 8 44 408 31 397 3.67e-63 211
Msa0014300 AT1G12740.1 27.729 458 312 8 19 459 4 459 3.93e-63 213
Msa0014300 AT1G12740.2 27.586 464 311 9 19 459 4 465 3.33e-61 207
Msa0014300 AT5G38970.3 28.753 393 274 5 20 410 10 398 3.57e-61 206
Msa0014300 AT1G12740.4 27.371 464 312 9 19 459 4 465 1.36e-60 206
Msa0014300 AT1G73340.1 27.593 482 315 9 15 478 17 482 1.88e-60 206
Msa0014300 AT1G19630.2 31.873 411 263 9 14 411 4 410 2.67e-56 193
Msa0014300 AT5G48000.2 28.604 444 300 9 44 474 35 474 7.29e-56 193
Msa0014300 AT5G48000.4 28.604 444 300 9 44 474 35 474 7.29e-56 193
Msa0014300 AT5G48000.7 28.604 444 300 9 44 474 35 474 7.29e-56 193
Msa0014300 AT5G48000.6 28.604 444 300 9 44 474 35 474 7.29e-56 193
Msa0014300 AT5G48000.5 28.604 444 300 9 44 474 35 474 7.29e-56 193
Msa0014300 AT5G48000.3 28.604 444 300 9 44 474 35 474 7.29e-56 193
Msa0014300 AT5G48000.1 28.604 444 300 9 44 474 76 515 2.09e-55 193
Msa0014300 AT5G14400.2 28.798 441 270 13 49 473 1 413 6.71e-53 184
Msa0014300 AT1G55940.2 27.071 495 311 15 15 478 17 492 3.85e-52 184
Msa0014300 AT5G14400.3 30.435 414 249 12 49 448 1 389 7.34e-51 177
Msa0014300 AT1G55940.1 27.646 463 288 14 15 446 17 463 6.47e-50 177
Msa0014300 AT5G38970.2 26.371 383 274 6 96 474 4 382 6.49e-50 175
Msa0014300 AT5G38970.4 26.371 383 274 6 96 474 4 382 6.49e-50 175
Msa0014300 AT1G78490.1 28.770 431 292 9 44 462 35 462 2.57e-49 176
Msa0014300 AT5G05690.3 29.859 355 224 9 130 471 2 344 1.96e-48 170
Msa0014300 AT1G65670.1 27.333 450 295 11 18 450 7 441 4.52e-48 172
Msa0014300 AT3G50660.2 29.602 402 236 10 44 407 39 431 1.56e-47 170
Msa0014300 AT4G15300.2 27.171 449 299 11 19 450 8 445 3.47e-46 167
Msa0014300 AT3G44970.1 26.981 467 308 13 32 478 21 474 3.93e-46 167
Msa0014300 AT4G15300.3 27.664 441 291 11 27 450 6 435 6.86e-46 166
Msa0014300 AT4G36380.2 28.824 340 231 6 43 372 68 406 2.73e-43 158
Msa0014300 AT4G15393.2 26.503 449 303 16 18 450 7 444 1.59e-42 157
Msa0014300 AT5G36110.2 29.462 353 227 8 44 381 34 379 2.14e-41 152
Msa0014300 AT1G12740.3 26.446 363 256 6 19 372 4 364 7.82e-41 150
Msa0014300 AT4G15310.1 27.556 450 305 11 14 450 7 448 2.04e-40 151
Msa0014300 AT5G14400.1 29.765 383 233 12 101 473 3 359 2.34e-40 149
Msa0014300 AT4G15300.1 26.134 463 292 13 27 450 6 457 1.24e-38 147
Msa0014300 AT1G78490.2 28.150 373 257 7 44 407 35 405 3.96e-38 144
Msa0014300 AT2G42850.2 30.108 372 222 12 35 381 30 388 4.63e-38 143
Msa0014300 AT4G15396.1 25.169 445 311 14 19 450 11 446 6.45e-38 144
Msa0014300 AT4G15396.3 25.282 443 309 14 19 448 11 444 1.18e-36 140
Msa0014300 AT4G15396.2 24.609 447 290 16 19 450 11 425 1.12e-31 127
Msa0014300 AT4G15393.1 25.310 403 279 14 18 408 7 399 4.60e-31 124
Msa0014300 AT5G36130.1 41.176 136 78 2 340 473 1 136 8.43e-31 116
Msa0014300 AT5G14400.4 26.163 344 220 10 49 372 1 330 1.08e-30 121
Msa0014300 AT3G30290.1 24.603 378 271 9 80 450 5 375 4.84e-30 121
Msa0014300 AT5G36140.1 28.623 276 177 9 44 306 33 301 2.37e-27 112
Msa0014300 AT4G15396.4 24.121 398 285 12 19 407 11 400 3.11e-27 113
Msa0014300 AT5G04330.1 24.301 465 305 13 45 466 33 493 3.84e-27 114
Msa0014300 AT5G57220.1 26.061 495 294 18 12 463 1 466 2.11e-26 112
Msa0014300 AT2G46960.2 25.694 432 276 14 75 471 91 512 5.11e-26 111
Msa0014300 AT4G15393.3 23.940 401 254 14 18 408 7 366 1.50e-24 105
Msa0014300 AT4G37430.1 23.368 475 308 14 22 451 1 464 1.74e-24 106
Msa0014300 AT4G37400.1 27.070 314 207 10 163 463 168 472 3.06e-24 105
Msa0014300 AT3G20950.1 23.457 486 320 20 12 452 7 485 2.75e-23 103
Msa0014300 AT3G28740.1 27.667 300 194 9 163 451 181 468 9.57e-23 101
Msa0014300 AT4G37370.1 27.982 218 151 4 236 452 248 460 1.27e-22 100
Msa0014300 AT3G20940.1 22.173 451 299 13 44 452 42 482 1.29e-22 101
Msa0014300 AT2G46960.1 25.320 391 248 13 115 471 16 396 2.18e-22 99.4
Msa0014300 AT5G25120.1 23.555 467 309 15 21 450 6 461 2.20e-22 100
Msa0014300 AT3G20110.1 22.921 493 317 16 3 453 1 472 2.66e-22 100
Msa0014300 AT4G31500.1 24.396 455 279 15 44 450 29 466 3.17e-22 99.8
Msa0014300 AT4G13770.1 23.667 469 311 14 20 450 8 467 4.04e-22 99.8
Msa0014300 AT1G74110.1 25.743 505 301 23 11 455 24 514 5.78e-22 99.4
Msa0014300 AT5G25180.1 23.617 470 309 15 18 450 5 461 1.17e-21 98.2
Msa0014300 AT1G11680.1 22.395 451 301 12 40 463 35 463 4.07e-21 96.3
Msa0014300 AT2G28850.1 22.944 462 321 14 37 471 30 483 1.06e-20 95.1
Msa0014300 AT2G27010.1 22.304 408 289 9 75 461 66 466 1.25e-20 95.1
Msa0014300 AT3G26150.1 24.094 469 300 16 44 469 30 485 1.79e-20 94.7
Msa0014300 AT5G25140.1 23.679 473 313 14 14 450 1 461 2.62e-20 94.0
Msa0014300 AT3G32047.1 22.199 482 336 13 7 453 2 479 3.76e-20 93.6
Msa0014300 AT2G25160.1 22.567 483 318 17 12 446 1 475 4.71e-20 93.6
Msa0014300 AT4G12320.1 23.750 480 305 15 17 450 17 481 4.77e-20 93.2
Msa0014300 AT3G26160.1 23.474 426 283 14 44 431 30 450 5.13e-20 93.2
Msa0014300 AT4G15360.1 23.044 473 314 15 18 450 14 476 5.29e-20 93.2
Msa0014300 AT2G45560.1 24.792 480 300 18 19 450 9 475 6.57e-20 92.8
Msa0014300 AT2G45550.1 24.779 452 281 16 44 450 38 475 7.30e-20 92.8
Msa0014300 AT1G11600.1 22.453 481 312 14 21 448 6 478 1.63e-19 91.7
Msa0014300 AT4G36220.1 21.896 443 297 10 51 450 47 483 2.08e-19 91.3
Msa0014300 AT5G06905.1 23.457 486 315 15 23 458 9 487 2.10e-19 91.3
Msa0014300 AT4G37320.1 26.957 230 155 5 236 457 249 473 3.05e-19 90.9
Msa0014300 AT3G26180.1 22.889 450 294 14 44 450 30 469 3.13e-19 90.9
Msa0014300 AT1G64930.1 23.932 468 290 16 38 451 25 480 4.06e-19 90.5
Msa0014300 AT1G13110.1 23.207 474 316 14 20 450 3 471 4.30e-19 90.5
Msa0014300 AT3G26170.1 22.444 450 296 14 44 450 30 469 4.97e-19 90.1
Msa0014300 AT4G37360.1 30.726 179 119 3 275 452 287 461 5.33e-19 90.1
Msa0014300 AT4G37410.1 22.718 493 335 18 19 476 6 487 6.32e-19 89.7
Msa0014300 AT1G64940.1 27.434 226 154 3 233 451 258 480 7.11e-19 89.7
Msa0014300 AT1G66540.2 28.788 198 130 5 274 466 114 305 8.38e-19 87.8
Msa0014300 AT1G66540.1 28.788 198 130 5 274 466 173 364 2.01e-18 87.4
Msa0014300 AT2G14100.1 21.971 487 318 15 17 458 15 484 2.73e-18 87.8
Msa0014300 AT5G36220.2 23.397 312 214 8 154 453 24 322 3.59e-18 86.3
Msa0014300 AT4G12300.1 22.222 477 310 14 18 450 20 479 3.75e-18 87.4
Msa0014300 AT3G26230.1 22.785 474 313 12 21 450 3 467 3.76e-18 87.4
Msa0014300 AT2G26170.1 22.049 449 295 13 46 446 47 488 3.93e-18 87.4
Msa0014300 AT2G46660.1 21.903 452 297 14 46 458 72 506 4.36e-18 87.4
Msa0014300 AT2G27000.1 23.113 424 266 14 75 452 70 479 5.43e-18 87.0
Msa0014300 AT3G20130.1 22.381 420 273 13 75 452 73 481 5.96e-18 87.0
Msa0014300 AT3G20120.4 21.934 424 280 15 75 458 72 484 6.00e-18 87.0
Msa0014300 AT3G48320.1 22.532 466 320 14 15 450 3 457 9.30e-18 86.3
Msa0014300 AT5G25130.1 25.166 453 285 18 38 450 23 461 9.59e-18 86.3
Msa0014300 AT4G12330.1 22.664 428 288 14 67 458 68 488 9.68e-18 86.3
Msa0014300 AT2G34490.1 22.016 486 337 16 17 471 13 487 1.04e-17 86.3
Msa0014300 AT5G36220.1 24.104 307 208 8 159 453 175 468 1.06e-17 86.3
Msa0014300 AT2G23190.1 27.434 226 156 5 228 452 287 505 1.20e-17 86.3
Msa0014300 AT2G23220.1 24.746 295 196 8 178 452 188 476 1.21e-17 85.9
Msa0014300 AT3G26270.1 22.222 459 307 13 33 450 21 470 1.91e-17 85.1
Msa0014300 AT3G20130.2 25.896 251 165 6 213 452 213 453 2.34e-17 85.1
Msa0014300 AT4G37340.1 25.676 296 198 9 168 452 177 461 3.45e-17 84.3
Msa0014300 AT4G15110.1 24.074 270 155 7 234 458 294 558 3.50e-17 84.7
Msa0014300 AT4G27710.1 24.769 432 278 15 75 471 93 512 3.75e-17 84.3
Msa0014300 AT3G26300.1 22.581 465 321 17 20 450 6 465 4.02e-17 84.3
Msa0014300 AT4G37330.1 23.210 461 318 17 20 452 6 458 4.39e-17 84.0
Msa0014300 AT4G31940.1 31.148 183 104 8 274 445 307 478 6.93e-17 83.6
Msa0014300 AT5G67310.1 30.000 180 115 5 274 449 297 469 7.62e-17 83.6
Msa0014300 AT3G26220.1 22.774 483 321 15 21 458 3 478 8.71e-17 83.2
Msa0014300 AT3G20120.2 22.841 359 240 11 119 458 8 348 9.53e-17 82.4
Msa0014300 AT3G20120.3 22.841 359 240 11 119 458 8 348 9.53e-17 82.4
Msa0014300 AT3G20120.1 22.841 359 240 11 119 458 8 348 9.53e-17 82.4
Msa0014300 AT3G52970.1 24.740 481 303 15 44 478 36 503 1.02e-16 83.2
Msa0014300 AT1G31800.1 27.807 187 123 4 272 451 361 542 1.68e-16 82.8
Msa0014300 AT3G26190.1 22.321 448 298 12 44 450 28 466 1.68e-16 82.4
Msa0014300 AT2G45570.1 23.355 471 291 17 58 472 51 507 1.96e-16 82.0
Msa0014300 AT5G24900.1 22.595 447 294 15 69 474 90 525 2.47e-16 82.0
Msa0014300 AT3G26180.2 26.540 211 145 5 246 450 129 335 2.79e-16 80.9
Msa0014300 AT3G53130.1 28.632 234 135 8 228 439 278 501 3.00e-16 81.6
Msa0014300 AT4G31970.1 30.387 181 104 8 276 445 308 477 3.15e-16 81.6
Msa0014300 AT5G24910.1 21.272 456 304 15 61 473 86 529 5.22e-16 80.9
Msa0014300 AT4G31950.1 26.126 222 136 8 231 431 243 457 5.56e-16 80.9
Msa0014300 AT5G44620.1 22.118 425 280 13 67 450 68 482 6.31e-16 80.5
Msa0014300 AT3G44970.2 23.631 347 240 11 32 361 21 359 6.75e-16 79.7
Msa0014300 AT5G24900.2 25.228 329 204 13 177 474 91 408 8.74e-16 79.7
Msa0014300 AT3G25180.1 27.304 293 179 10 186 453 197 480 1.12e-15 79.7
Msa0014300 AT1G64950.1 21.616 458 312 11 38 451 25 479 1.49e-15 79.3
Msa0014300 AT3G52970.2 24.444 495 301 17 44 478 36 517 1.92e-15 79.3
Msa0014300 AT2G26170.2 25.641 234 160 5 223 446 176 405 2.08e-15 78.6
Msa0014300 AT4G37310.1 24.806 258 177 6 225 470 236 488 2.39e-15 79.0
Msa0014300 AT1G50520.1 21.239 452 297 10 69 474 68 506 2.64e-15 79.0
Msa0014300 AT2G12190.1 21.996 491 329 13 38 478 25 511 2.97e-15 78.6
Msa0014300 AT1G33730.1 26.872 227 148 8 238 455 130 347 6.13e-15 76.6
Msa0014300 AT1G33730.2 26.872 227 148 8 238 455 130 347 6.13e-15 76.6
Msa0014300 AT3G20935.1 26.966 178 116 3 285 452 134 307 9.08e-15 75.9
Msa0014300 AT3G26280.1 22.222 468 313 15 23 450 15 471 9.41e-15 77.0
Msa0014300 AT3G48310.1 21.226 424 282 15 63 450 50 457 1.24e-14 76.6
Msa0014300 AT3G26280.2 22.222 468 313 15 23 450 32 488 1.30e-14 76.6
Msa0014300 AT2G30750.1 22.697 445 309 14 44 458 33 472 1.38e-14 76.3
Msa0014300 AT2G45580.1 22.551 439 284 11 64 455 57 486 1.42e-14 76.3
Msa0014300 AT3G48290.1 22.851 442 308 16 35 450 24 458 1.47e-14 76.3
Msa0014300 AT3G48300.1 22.976 457 296 21 35 453 19 457 1.50e-14 76.3
Msa0014300 AT3G48300.2 22.976 457 296 21 35 453 21 459 1.51e-14 76.3
Msa0014300 AT3G26210.1 25.000 196 134 5 261 448 276 466 1.90e-14 75.9
Msa0014300 AT1G13080.1 26.042 192 133 4 271 456 287 475 2.14e-14 75.9
Msa0014300 AT1G13100.1 25.118 211 141 4 271 467 283 490 2.24e-14 75.9
Msa0014300 AT5G24950.1 22.345 452 305 15 44 459 32 473 2.63e-14 75.5
Msa0014300 AT1G13080.2 27.429 175 118 4 282 450 180 351 2.64e-14 75.1
Msa0014300 AT5G35715.1 21.814 408 264 12 87 450 8 404 3.92e-14 74.7
Msa0014300 AT4G15380.1 21.256 414 275 12 75 449 73 474 5.29e-14 74.7
Msa0014300 AT3G20960.2 21.294 479 336 14 12 453 7 481 5.68e-14 74.7
Msa0014300 AT3G53300.1 23.165 436 275 14 42 431 26 447 9.66e-14 73.9
Msa0014300 AT1G28430.1 18.942 359 260 10 119 460 143 487 1.41e-13 73.2
Msa0014300 AT2G45580.2 25.781 256 166 7 219 455 82 332 1.47e-13 72.4
Msa0014300 AT4G15350.1 21.262 428 285 13 69 454 60 477 1.60e-13 73.2
Msa0014300 AT3G26320.1 20.879 455 304 14 38 450 25 465 3.42e-13 72.0
Msa0014300 AT3G20960.1 23.043 230 158 5 234 453 158 378 4.32e-13 71.2
Msa0014300 AT1G50560.1 21.795 234 164 5 237 457 261 488 1.07e-12 70.5
Msa0014300 AT3G20090.2 21.176 425 274 16 75 453 74 483 1.23e-12 70.5
Msa0014300 AT3G20090.1 23.585 212 138 6 257 453 143 345 1.42e-12 69.7
Msa0014300 AT2G25160.2 22.427 379 252 13 12 352 1 375 2.39e-11 65.9
Msa0014300 AT5G25900.1 20.091 438 306 11 50 450 49 479 2.80e-11 66.2
Msa0014300 AT3G14620.1 21.485 377 262 10 89 439 109 477 5.43e-11 65.1
Msa0014300 AT5G52320.1 24.806 258 158 9 241 474 255 500 7.03e-11 64.7
Msa0014300 AT2G22330.2 23.276 232 163 5 235 458 311 535 8.86e-11 64.7
Msa0014300 AT2G22330.1 23.276 232 163 5 235 458 288 512 9.54e-11 64.3

Find 149 sgRNAs with CRISPR-Local

Find 605 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGTTTGTCTTTGTCTCTA+TGG 0.243020 1_1:-22679265 None:intergenic
TGTCTCATTAGGCCTATAAA+TGG 0.250262 1_1:-22689654 None:intergenic
TTCTCCTTCCTTTCCTTCAA+TGG 0.253456 1_1:+22679234 Msa0014300:CDS
TTCTTTAGAGTTATCTTTAC+TGG 0.255766 1_1:-22689515 None:intergenic
GGAAGGACTTTCCAACCTTT+TGG 0.265007 1_1:-22682636 None:intergenic
AGAAAGGAGAGCAGGAATTA+TGG 0.273001 1_1:+22680731 Msa0014300:CDS
GAAGTTCCATGGAGATTTAA+AGG 0.275963 1_1:-22680199 None:intergenic
CATGCAATTTGTAGCATGTT+AGG 0.292625 1_1:+22689577 Msa0014300:three_prime_UTR
GGAATAGATAGTGATGAATA+TGG 0.293828 1_1:-22679047 None:intergenic
TTTACTGGTAATCCATGTTT+TGG 0.307736 1_1:-22689500 None:intergenic
CTTGTGGAGAAGAAGGAATT+TGG 0.315447 1_1:-22679350 None:intergenic
CATCTCTTGCAAGGAGTTGA+TGG 0.316473 1_1:-22679951 None:intergenic
CCTATCATCTTCTCTTTGCT+TGG 0.320756 1_1:-22679779 None:intergenic
AATTATGGTGGTGGGTTGTT+GGG 0.341580 1_1:+22680746 Msa0014300:CDS
GAATTATGGTGGTGGGTTGT+TGG 0.345665 1_1:+22680745 Msa0014300:CDS
ATCTCCATGGAACTTCATAT+TGG 0.345941 1_1:+22680206 Msa0014300:CDS
CCAAATGGCATATATGTGTT+TGG 0.353790 1_1:-22683224 None:intergenic
GAGGGAAAGGGAACGAGAAT+TGG 0.358340 1_1:-22679068 None:intergenic
AATGTTTATAAAATTGTAAA+GGG 0.365557 1_1:+22689773 Msa0014300:three_prime_UTR
AATGGAGATGGAATTCAATA+TGG 0.368593 1_1:+22689464 Msa0014300:CDS
TGTTGAAAGAACAAAGCTTC+TGG 0.384343 1_1:-22679803 None:intergenic
CTCCTTGCAAGAGATGAAAA+AGG 0.385457 1_1:+22679958 Msa0014300:CDS
GTTGAGTGTACAAAACAATA+AGG 0.392066 1_1:-22679122 None:intergenic
AGGTGGCAAGTTGTGGGAAA+TGG 0.393836 1_1:+22689446 Msa0014300:intron
CCAAACACATATATGCCATT+TGG 0.398411 1_1:+22683224 Msa0014300:CDS
ACATATATGCCATTTGGAAA+TGG 0.411541 1_1:+22683230 Msa0014300:CDS
ATCATCTTCTCTTTGCTTGG+AGG 0.417369 1_1:-22679776 None:intergenic
GTTTGACCCTTCAAGATTTG+AGG 0.417850 1_1:+22682710 Msa0014300:CDS
TTAAGGGGTGTCGGTGTGTA+AGG 0.419174 1_1:-22678975 None:intergenic
AAATGTTTATAAAATTGTAA+AGG 0.419928 1_1:+22689772 Msa0014300:three_prime_UTR
TTGCACTTCTTAACGTCTCT+TGG 0.422074 1_1:-22682551 None:intergenic
TATTGTATAGTGAAAGTTAA+GGG 0.422547 1_1:-22678991 None:intergenic
CATGTGTTCTAGTGCTGCTT+AGG 0.422811 1_1:-22678932 None:intergenic
TATGGTGTTTCCACCATTGA+AGG 0.423550 1_1:-22679247 None:intergenic
AGGAAAGTCGTGGACTTTCA+TGG 0.427875 1_1:+22681476 Msa0014300:CDS
TCAATGGGTTGGCCTTACTT+TGG 0.431131 1_1:+22679299 Msa0014300:CDS
TCTTTGCTTGGAGGGTATGT+TGG 0.436270 1_1:-22679767 None:intergenic
TGAGAGTATAAAGAGCATAA+TGG 0.438070 1_1:+22680703 Msa0014300:CDS
ATTCTTACCTCAAATCTTGA+AGG 0.441826 1_1:-22682717 None:intergenic
TTTAAAATTACCTGTATGAA+AGG 0.442438 1_1:-22683319 None:intergenic
TGCTTTAGGTGGCAAGTTGT+GGG 0.446990 1_1:+22689440 Msa0014300:intron
TTCATATTGGAAGGCATTGA+AGG 0.448653 1_1:+22680219 Msa0014300:CDS
TGGAAAGAAGAAAGGAGAGC+AGG 0.448722 1_1:+22680723 Msa0014300:CDS
TTGCTTTAGGTGGCAAGTTG+TGG 0.450644 1_1:+22689439 Msa0014300:intron
GTCTCATTAGGCCTATAAAT+GGG 0.454968 1_1:-22689653 None:intergenic
TTTCTGCCTTGTGGAGAAGA+AGG 0.456190 1_1:-22679357 None:intergenic
AAGAGAATTGTATCATTGCT+TGG 0.456903 1_1:+22680156 Msa0014300:CDS
CCCATTGGCTGCATTATGCA+TGG 0.461001 1_1:+22689686 Msa0014300:three_prime_UTR
ACCATCTCACCCTTTCATAC+AGG 0.462924 1_1:+22683309 Msa0014300:CDS
GCATGACAATGTCAATCTCT+TGG 0.463011 1_1:+22680904 Msa0014300:CDS
CAAGTGGCTGATAATATCAT+TGG 0.463195 1_1:+22680821 Msa0014300:CDS
CATAGGTGGCAAAAGGGAGT+TGG 0.464144 1_1:-22678900 None:intergenic
AAGAGGAGCAATATAATGAA+AGG 0.466239 1_1:-22679206 None:intergenic
ACATAATGTTTATACATACA+TGG 0.467030 1_1:-22689710 None:intergenic
GGCAGATGCCCTTCACAAGC+AGG 0.468177 1_1:+22681509 Msa0014300:CDS
CCAAGCAAAGAGAAGATGAT+AGG 0.468196 1_1:+22679779 Msa0014300:CDS
TCATCTTCTCTTTGCTTGGA+GGG 0.468509 1_1:-22679775 None:intergenic
GTTACTCCATTCCAAAAGGT+TGG 0.469052 1_1:+22682625 Msa0014300:CDS
GTGGCTGCAAATTCAGCCTT+TGG 0.469714 1_1:+22680103 Msa0014300:CDS
TCTTCTCCACAAGGCAGAAA+AGG 0.474222 1_1:+22679360 Msa0014300:CDS
TCTTATCCTTTAAATCTCCA+TGG 0.474851 1_1:+22680193 Msa0014300:CDS
ATAGGTGGCAAAAGGGAGTT+GGG 0.476820 1_1:-22678899 None:intergenic
ATATTGTATAGTGAAAGTTA+AGG 0.484448 1_1:-22678992 None:intergenic
GACTTTCATGGGAGGATACC+AGG 0.485602 1_1:+22681488 Msa0014300:CDS
CAAGGTTACTCCATTCCAAA+AGG 0.488687 1_1:+22682621 Msa0014300:CDS
AATGTTTCATAGGTGGCAAA+AGG 0.491722 1_1:-22678907 None:intergenic
TCCTTCCTTTCCTTCAATGG+TGG 0.494945 1_1:+22679237 Msa0014300:CDS
GAGCATAATGGAAAGAAGAA+AGG 0.496695 1_1:+22680715 Msa0014300:CDS
GGGTCAAACTTGTGTGGTTG+AGG 0.499290 1_1:-22682696 None:intergenic
TTAGCTATTTATAGAGGGAA+AGG 0.499471 1_1:-22679081 None:intergenic
GTTGTGTTAGCTATTTATAG+AGG 0.500748 1_1:-22679087 None:intergenic
TGCTTAGGAAAATGTTTCAT+AGG 0.501808 1_1:-22678917 None:intergenic
CCACAGCTAGTGTTCTAACA+TGG 0.502575 1_1:+22680867 Msa0014300:CDS
GCTTGTGAAGGGCATCTGCC+TGG 0.502887 1_1:-22681506 None:intergenic
AGAGGAGCAATATAATGAAA+GGG 0.504519 1_1:-22679205 None:intergenic
CATCTCATTTATTTCACCAA+AGG 0.505223 1_1:-22680119 None:intergenic
TCAGAAAATGAGAGCAAAGT+GGG 0.509018 1_1:+22689552 Msa0014300:three_prime_UTR
TTAAAATTACCTGTATGAAA+GGG 0.510930 1_1:-22683318 None:intergenic
CCACTTGAGAATCAGTTAGT+TGG 0.513926 1_1:-22680805 None:intergenic
TAAGGCCAACCCATTGAACC+AGG 0.514931 1_1:-22679293 None:intergenic
ATTGTATCATTGCTTGGAGA+AGG 0.516728 1_1:+22680162 Msa0014300:CDS
ATGGTTCTATTAGCCCAAGT+TGG 0.517928 1_1:-22679932 None:intergenic
TTGAGGGTCTCTCCAAAGTA+AGG 0.518210 1_1:-22679311 None:intergenic
CAAAACAATAAGGTGAAAGA+TGG 0.521743 1_1:-22679112 None:intergenic
GAGAGCAGGAATTATGGTGG+TGG 0.528220 1_1:+22680737 Msa0014300:CDS
GGTCAAACTTGTGTGGTTGA+GGG 0.530002 1_1:-22682695 None:intergenic
ATATTCAAGACACACATACT+AGG 0.530311 1_1:+22679671 Msa0014300:CDS
GGAAAGTCGTGGACTTTCAT+GGG 0.532326 1_1:+22681477 Msa0014300:CDS
AATATTAATGAAGGCAAGGA+AGG 0.536689 1_1:+22680673 Msa0014300:intron
CCTTCCAATATGAAGTTCCA+TGG 0.539204 1_1:-22680210 None:intergenic
CCATGCATAATGCAGCCAAT+GGG 0.539739 1_1:-22689686 None:intergenic
GGAATTCTGTTGAGAGGCAA+AGG 0.543619 1_1:+22680767 Msa0014300:CDS
AGCTTAGCAAGCTCACTACC+AGG 0.548207 1_1:-22683266 None:intergenic
TTGAACTAGCTTCTTGAGCA+TGG 0.548888 1_1:-22679840 None:intergenic
TAGTGAGCTTGCTAAGCTTG+AGG 0.549149 1_1:+22683271 Msa0014300:CDS
AATGGAGTCCACTCTTGTCC+TGG 0.549474 1_1:+22683248 Msa0014300:CDS
TAGCTATTTATAGAGGGAAA+GGG 0.550473 1_1:-22679080 None:intergenic
AGCACTGCTCTAGCTGCCTC+AGG 0.552029 1_1:-22679719 None:intergenic
GAGACAAAACTATTTCCCAT+TGG 0.552203 1_1:+22689671 Msa0014300:three_prime_UTR
GAGTGGACTCCATTTCCAAA+TGG 0.556423 1_1:-22683239 None:intergenic
CAAGTTGTGGGAAATGGAGA+TGG 0.556760 1_1:+22689452 Msa0014300:CDS
AAAGGGTGAGATGGTGAAGG+AGG 0.557982 1_1:-22683301 None:intergenic
CCATGGAACTTCATATTGGA+AGG 0.559904 1_1:+22680210 Msa0014300:CDS
TTGTATCATTGCTTGGAGAA+GGG 0.560306 1_1:+22680163 Msa0014300:CDS
TGTTTCCACCATTGAAGGAA+AGG 0.561586 1_1:-22679242 None:intergenic
TCCACCATTGAAGGAAAGGA+AGG 0.562426 1_1:-22679238 None:intergenic
GAATACTTCTAAAGAGTGGA+AGG 0.563830 1_1:-22682653 None:intergenic
TAGAGAAGCAGTTAGAGATG+TGG 0.564865 1_1:+22682593 Msa0014300:CDS
ATGTTTCATAGGTGGCAAAA+GGG 0.566914 1_1:-22678906 None:intergenic
GCCATGCATAATGCAGCCAA+TGG 0.568445 1_1:-22689687 None:intergenic
TTCTTACCTCAAATCTTGAA+GGG 0.569190 1_1:-22682716 None:intergenic
CAAATTCCTTCTTCTCCACA+AGG 0.570163 1_1:+22679351 Msa0014300:CDS
TTGTGTTAGCTATTTATAGA+GGG 0.576967 1_1:-22679086 None:intergenic
GTTAGAGATGTGGAACTACA+AGG 0.577103 1_1:+22682603 Msa0014300:CDS
AGAGCAGGAATTATGGTGGT+GGG 0.584862 1_1:+22680738 Msa0014300:CDS
TAGTGAAAGTTAAGGGGTGT+CGG 0.588100 1_1:-22678984 None:intergenic
TTAGGAAAATGTTTCATAGG+TGG 0.590225 1_1:-22678914 None:intergenic
TGATGAATACTTCTAAAGAG+TGG 0.590871 1_1:-22682657 None:intergenic
AAGGAGAGCAGGAATTATGG+TGG 0.600653 1_1:+22680734 Msa0014300:CDS
CATAATGTTTATACATACAT+GGG 0.601772 1_1:-22689709 None:intergenic
GGCATATATGTGTTTGGTCG+AGG 0.601844 1_1:-22683218 None:intergenic
CTTTGGTGAAATAAATGAGA+TGG 0.606531 1_1:+22680120 Msa0014300:CDS
GAATAGATAGTGATGAATAT+GGG 0.610553 1_1:-22679046 None:intergenic
CCAACTAACTGATTCTCAAG+TGG 0.617753 1_1:+22680805 Msa0014300:CDS
ATTGTATAGTGAAAGTTAAG+GGG 0.618407 1_1:-22678990 None:intergenic
AACAATAAGGTGAAAGATGG+CGG 0.619078 1_1:-22679109 None:intergenic
ACCTGTATGAAAGGGTGAGA+TGG 0.620275 1_1:-22683310 None:intergenic
GCTCACTACCAGGACAAGAG+TGG 0.624894 1_1:-22683256 None:intergenic
GCAGATGCCCTTCACAAGCA+GGG 0.625434 1_1:+22681510 Msa0014300:CDS
CACAGCTAGTGTTCTAACAT+GGG 0.626984 1_1:+22680868 Msa0014300:CDS
TTGTTGGGAATTCTGTTGAG+AGG 0.627900 1_1:+22680761 Msa0014300:CDS
TTCAGAAAATGAGAGCAAAG+TGG 0.628201 1_1:+22689551 Msa0014300:three_prime_UTR
GAAGCTTTGTTCTTTCAACA+AGG 0.632497 1_1:+22679806 Msa0014300:CDS
TGTGGTTGAGGGAAGAAATG+AGG 0.641955 1_1:-22682684 None:intergenic
ACATGCGTAATGAGTGTCAT+GGG 0.643948 1_1:-22678876 None:intergenic
CCATGTTAGAACACTAGCTG+TGG 0.646833 1_1:-22680867 None:intergenic
ATGAAAGGGTGAGATGGTGA+AGG 0.646984 1_1:-22683304 None:intergenic
CTTGAAGGGTCAAACTTGTG+TGG 0.648197 1_1:-22682702 None:intergenic
AAACTTGCTAAGGAAAGTCG+TGG 0.655414 1_1:+22681466 Msa0014300:CDS
ATATATGTGTTTGGTCGAGG+TGG 0.657816 1_1:-22683215 None:intergenic
CAGAAAATGAGAGCAAAGTG+GGG 0.667160 1_1:+22689553 Msa0014300:three_prime_UTR
AGGCCAACCCATTGAACCAG+GGG 0.668986 1_1:-22679291 None:intergenic
AAGGCCAACCCATTGAACCA+GGG 0.669847 1_1:-22679292 None:intergenic
GGACTTGATATCATCACACA+AGG 0.686125 1_1:-22679698 None:intergenic
GACATGCGTAATGAGTGTCA+TGG 0.687149 1_1:-22678877 None:intergenic
AAGTCGTGGACTTTCATGGG+AGG 0.705204 1_1:+22681480 Msa0014300:CDS
AAGTGATGTGAAGAGTTGCA+TGG 0.715616 1_1:-22679156 None:intergenic
GGCCAACCCATTGAACCAGG+GGG 0.740914 1_1:-22679290 None:intergenic
TGTGATGATATCAAGTCCTG+AGG 0.742960 1_1:+22679703 Msa0014300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAATTGTAGTAAAATA+TGG + chr1_1:22679536-22679555 Msa0014300:intron 10.0%
!! TAAATATATTGTAGTAAAAT+TGG + chr1_1:22680509-22680528 Msa0014300:intron 10.0%
!! AAATATATTGTAGTAAAATT+GGG + chr1_1:22680510-22680529 Msa0014300:intron 10.0%
!!! ATAAACAATTTTTTTTTCTT+TGG - chr1_1:22681334-22681353 None:intergenic 10.0%
!!! AATAATAACTTTATTTTTTG+AGG + chr1_1:22681536-22681555 Msa0014300:intron 10.0%
!!! ATAATAACTTTATTTTTTGA+GGG + chr1_1:22681537-22681556 Msa0014300:intron 10.0%
!!! TTCAAAGAATTTTTTTTATA+TGG - chr1_1:22681870-22681889 None:intergenic 10.0%
!!! TATTTTATTTATTTTACAAG+GGG - chr1_1:22681996-22682015 None:intergenic 10.0%
!! TAAATGTACAAATATATTAA+TGG - chr1_1:22684497-22684516 None:intergenic 10.0%
!!! ATATTTCTTTTTTTTTTTTG+AGG + chr1_1:22685102-22685121 Msa0014300:intron 10.0%
!! AAAATACAATAATTTACTTA+AGG - chr1_1:22686379-22686398 None:intergenic 10.0%
!!! TTTTTTATAAAGTAAAGAAA+GGG - chr1_1:22687968-22687987 None:intergenic 10.0%
!!! TTTTTTTATAAAGTAAAGAA+AGG - chr1_1:22687969-22687988 None:intergenic 10.0%
!! AAATGTTTATAAAATTGTAA+AGG + chr1_1:22689772-22689791 Msa0014300:three_prime_UTR 10.0%
!! AATGTTTATAAAATTGTAAA+GGG + chr1_1:22689773-22689792 Msa0014300:three_prime_UTR 10.0%
!!! TTTTGAATTTAATTGAACAT+AGG + chr1_1:22679639-22679658 Msa0014300:intron 15.0%
!!! ATAAAGAAATTTTCTTGTTT+TGG + chr1_1:22680056-22680075 Msa0014300:intron 15.0%
!!! TAAGATAATGTTAACATTTT+GGG - chr1_1:22681009-22681028 None:intergenic 15.0%
!!! ATAAGATAATGTTAACATTT+TGG - chr1_1:22681010-22681029 None:intergenic 15.0%
!! AATCTCAAATATAAGAATAA+TGG + chr1_1:22681231-22681250 Msa0014300:intron 15.0%
!!! TAATAACTTTATTTTTTGAG+GGG + chr1_1:22681538-22681557 Msa0014300:intron 15.0%
!! GGTTTATTATAAAAAAAAAG+TGG + chr1_1:22681762-22681781 Msa0014300:intron 15.0%
!! TTCCTTAAAATATATTACAT+TGG + chr1_1:22681924-22681943 Msa0014300:intron 15.0%
!!! AACCAATGTAATATATTTTA+AGG - chr1_1:22681929-22681948 None:intergenic 15.0%
!!! TTTTTATATTACTTGTACAT+TGG + chr1_1:22682161-22682180 Msa0014300:intron 15.0%
!! AAGTTAAATGCTTAATAATA+TGG - chr1_1:22682457-22682476 None:intergenic 15.0%
!!! ATTTTAACTTTTTCTAATAG+TGG - chr1_1:22683369-22683388 None:intergenic 15.0%
!!! ATCTAACAAATGATTTATTT+TGG - chr1_1:22683634-22683653 None:intergenic 15.0%
!! TAGTCTATATATATATACTA+AGG + chr1_1:22684048-22684067 Msa0014300:intron 15.0%
!! AGTCTATATATATATACTAA+GGG + chr1_1:22684049-22684068 Msa0014300:intron 15.0%
!! AGTCTATATATATATACTAA+GGG - chr1_1:22684049-22684068 None:intergenic 15.0%
!! TAGTCTATATATATATACTA+AGG - chr1_1:22684048-22684067 None:intergenic 15.0%
!! ATTTGTACATTTATTGATAA+TGG + chr1_1:22684504-22684523 Msa0014300:intron 15.0%
!! GAATGTAAATATCTTTATAA+AGG + chr1_1:22684900-22684919 Msa0014300:intron 15.0%
!! TATGTATGAAATTAACAAAA+AGG + chr1_1:22685287-22685306 Msa0014300:intron 15.0%
!! TAGAATGATTTAAATGAATT+TGG - chr1_1:22685666-22685685 None:intergenic 15.0%
!!! CTTTGAAAATATTTTAAAAC+AGG - chr1_1:22686348-22686367 None:intergenic 15.0%
!!! ACTGTATTTTTCTTTTAATA+TGG + chr1_1:22686510-22686529 Msa0014300:intron 15.0%
!!! TTTTTCTTTTAATATGGTTT+TGG + chr1_1:22686516-22686535 Msa0014300:intron 15.0%
!!! CTTTTTTTTTTTTGTTTACA+TGG - chr1_1:22686850-22686869 None:intergenic 15.0%
!!! TAACTTTAGAAAAAGATTAA+TGG + chr1_1:22686967-22686986 Msa0014300:intron 15.0%
!!! GATAGAGTATTAAATTAAAA+TGG + chr1_1:22687242-22687261 Msa0014300:intron 15.0%
!! TAAATTAAAATGGAAAAAAC+TGG + chr1_1:22687252-22687271 Msa0014300:intron 15.0%
!!! AAGTTTGTTGATTTTTTTTT+TGG - chr1_1:22687558-22687577 None:intergenic 15.0%
!!! ATTTGAAATTCAAATTGTTT+TGG - chr1_1:22687647-22687666 None:intergenic 15.0%
!! TTTCAAATTTCACAATTAAA+AGG + chr1_1:22687659-22687678 Msa0014300:intron 15.0%
!!! TTTTATATGTATACGTATAT+TGG + chr1_1:22688091-22688110 Msa0014300:intron 15.0%
!! CAATATGAAACTTAAAATTT+AGG - chr1_1:22688274-22688293 None:intergenic 15.0%
!!! TTTTTGTTTTATAAACCTAT+TGG + chr1_1:22688784-22688803 Msa0014300:intron 15.0%
!! TTCAATGTATTTGATATTAA+GGG - chr1_1:22688846-22688865 None:intergenic 15.0%
!! TTTCAATGTATTTGATATTA+AGG - chr1_1:22688847-22688866 None:intergenic 15.0%
!! AAAATGAAAAGAATGATTAA+GGG - chr1_1:22689158-22689177 None:intergenic 15.0%
!! AAAAATGAAAAGAATGATTA+AGG - chr1_1:22689159-22689178 None:intergenic 15.0%
!!! TCATTTTTTATGAATAAGAA+TGG + chr1_1:22689171-22689190 Msa0014300:intron 15.0%
!!! TTTACAGAAATATAATTTTC+TGG - chr1_1:22689740-22689759 None:intergenic 15.0%
!! TATTGTATAGTGAAAGTTAA+GGG - chr1_1:22678994-22679013 None:intergenic 20.0%
!! ATATTGTATAGTGAAAGTTA+AGG - chr1_1:22678995-22679014 None:intergenic 20.0%
!! AGAAAAATCTAAACAAGAAT+TGG - chr1_1:22679183-22679202 None:intergenic 20.0%
!!! TTTTGTTGTGTACAATTTTT+TGG - chr1_1:22679469-22679488 None:intergenic 20.0%
!!! CAACAAAATTGTTATTTACA+TGG + chr1_1:22679481-22679500 Msa0014300:intron 20.0%
!!! AATTCAAACCTTTTATATTG+TGG + chr1_1:22679594-22679613 Msa0014300:intron 20.0%
!! AATTTAATTGAACATAGGTA+TGG + chr1_1:22679644-22679663 Msa0014300:intron 20.0%
!!! CAATGTTTTAAAAATCGAAT+CGG - chr1_1:22680580-22680599 None:intergenic 20.0%
!! GATGAAATGAATATTAATGA+AGG + chr1_1:22680664-22680683 Msa0014300:intron 20.0%
!!! TCTGCATATTTATATTTTGA+AGG + chr1_1:22680967-22680986 Msa0014300:intron 20.0%
!!! AATAACTTTATTTTTTGAGG+GGG + chr1_1:22681539-22681558 Msa0014300:intron 20.0%
!!! AAATGTATAAGTTGATTACT+TGG + chr1_1:22681615-22681634 Msa0014300:intron 20.0%
!!! TTTTTATAGGAACATTGAAT+TGG - chr1_1:22681711-22681730 None:intergenic 20.0%
!!! CATCAAGGTTATTTTTTTAT+AGG - chr1_1:22681724-22681743 None:intergenic 20.0%
!! AAAAAATGGTCGTATAAAAA+TGG - chr1_1:22682023-22682042 None:intergenic 20.0%
!! GTATCTCGTAATTTAAAAAA+TGG - chr1_1:22682037-22682056 None:intergenic 20.0%
!! TATCTCTCTTAATAATACAA+TGG + chr1_1:22682097-22682116 Msa0014300:intron 20.0%
!!! TGGTATCAGTTTTTTATTAT+CGG - chr1_1:22682299-22682318 None:intergenic 20.0%
!! TTATATTAGATGAGTCATAA+GGG - chr1_1:22682746-22682765 None:intergenic 20.0%
!! TATCCTTATATATTCATGTA+CGG + chr1_1:22682771-22682790 Msa0014300:intron 20.0%
!! TCATATCATAGAAAATGAAA+GGG - chr1_1:22682938-22682957 None:intergenic 20.0%
!! TTCATATCATAGAAAATGAA+AGG - chr1_1:22682939-22682958 None:intergenic 20.0%
!! TTAAAATTACCTGTATGAAA+GGG - chr1_1:22683321-22683340 None:intergenic 20.0%
!!! TTTAAAATTACCTGTATGAA+AGG - chr1_1:22683322-22683341 None:intergenic 20.0%
!! AAAATAATTGTACCAAAAGT+TGG + chr1_1:22683384-22683403 Msa0014300:intron 20.0%
!!! TTTTTGTCACAATAAATCTT+TGG - chr1_1:22683937-22683956 None:intergenic 20.0%
!! GACAAAAAAGAAAAACTAAA+TGG + chr1_1:22683672-22683691 Msa0014300:intron 20.0%
!! AACTAAATGGATAATTGTAT+TGG + chr1_1:22683685-22683704 Msa0014300:intron 20.0%
!! GACAAAAAAGAAAAACTAAA+TGG - chr1_1:22683672-22683691 None:intergenic 20.0%
!!! TTTTTGTCACAATAAATCTT+TGG + chr1_1:22683937-22683956 Msa0014300:intron 20.0%
!!! AAGACAAACAATTTTGTTAA+AGG + chr1_1:22684007-22684026 Msa0014300:intron 20.0%
!!! AAGACAAACAATTTTGTTAA+AGG - chr1_1:22684007-22684026 None:intergenic 20.0%
!! CCTATAATAAGTAACTAATT+AGG - chr1_1:22684534-22684553 None:intergenic 20.0%
!! CCTAATTAGTTACTTATTAT+AGG + chr1_1:22684531-22684550 Msa0014300:intron 20.0%
!! TTTCTTTGGCTAATATATAT+TGG - chr1_1:22684637-22684656 None:intergenic 20.0%
!!! TTTCTCTAAAAATAACAACA+GGG - chr1_1:22684877-22684896 None:intergenic 20.0%
!!! TTTTCTCTAAAAATAACAAC+AGG - chr1_1:22684878-22684897 None:intergenic 20.0%
!! TGGTAGAAGAAAAAAAATTA+GGG - chr1_1:22684959-22684978 None:intergenic 20.0%
!! TTGGTAGAAGAAAAAAAATT+AGG - chr1_1:22684960-22684979 None:intergenic 20.0%
!!! AGTATATGCTTATTTTTGTT+TGG - chr1_1:22684979-22684998 None:intergenic 20.0%
!! GATGTAAATTTATTAGTCAA+AGG + chr1_1:22685348-22685367 Msa0014300:intron 20.0%
!! AATGATTTAAATGAATTTGG+AGG - chr1_1:22685663-22685682 None:intergenic 20.0%
!! ACATTATTATTTCAAGAATG+AGG - chr1_1:22685777-22685796 None:intergenic 20.0%
!! GAATACAAAAAAAATGAAGA+AGG + chr1_1:22686224-22686243 Msa0014300:intron 20.0%
!! AAAAGAAAAATACAGTGAAA+AGG - chr1_1:22686506-22686525 None:intergenic 20.0%
!!! ATCTTTTATGAATGAAGTTT+AGG - chr1_1:22686889-22686908 None:intergenic 20.0%
!! TCAATTATTGATAGAAAACT+TGG + chr1_1:22686908-22686927 Msa0014300:intron 20.0%
!! ATTAAAAGGAGGAAAAAATT+AGG + chr1_1:22687673-22687692 Msa0014300:intron 20.0%
!! TTAAAAGGAGGAAAAAATTA+GGG + chr1_1:22687674-22687693 Msa0014300:intron 20.0%
!! ATTAATTACATGGAATTAGA+GGG + chr1_1:22687710-22687729 Msa0014300:intron 20.0%
!! ATTTACTACTACACAAAATA+TGG + chr1_1:22687842-22687861 Msa0014300:intron 20.0%
!!! TAGGACTATTTATATTGATT+TGG + chr1_1:22687929-22687948 Msa0014300:intron 20.0%
!!! TTCTAAGATTACAAATAGAA+TGG + chr1_1:22688455-22688474 Msa0014300:intron 20.0%
!! ATTGTTACATATATGGAAAT+AGG - chr1_1:22688527-22688546 None:intergenic 20.0%
!! AACCTTATCAAATTAATGAA+AGG + chr1_1:22688553-22688572 Msa0014300:intron 20.0%
!!! TTCCTTTCATTAATTTGATA+AGG - chr1_1:22688558-22688577 None:intergenic 20.0%
!! AATAATAGTCAAAGAATAGA+GGG - chr1_1:22688766-22688785 None:intergenic 20.0%
!! AAATAATAGTCAAAGAATAG+AGG - chr1_1:22688767-22688786 None:intergenic 20.0%
!! TGCAAAAATAAGTTATAACA+TGG - chr1_1:22688958-22688977 None:intergenic 20.0%
!!! TGAGAAATATTATACACTTT+TGG - chr1_1:22689210-22689229 None:intergenic 20.0%
!! AAATAAACGATTAATACTAC+AGG - chr1_1:22689237-22689256 None:intergenic 20.0%
!!! GACATATTTTTTCAAATCAT+TGG - chr1_1:22689361-22689380 None:intergenic 20.0%
!! CATAATGTTTATACATACAT+GGG - chr1_1:22689712-22689731 None:intergenic 20.0%
!! ACATAATGTTTATACATACA+TGG - chr1_1:22689713-22689732 None:intergenic 20.0%
! ATTGTATAGTGAAAGTTAAG+GGG - chr1_1:22678993-22679012 None:intergenic 25.0%
! GAATAGATAGTGATGAATAT+GGG - chr1_1:22679049-22679068 None:intergenic 25.0%
! TTGTGTTAGCTATTTATAGA+GGG - chr1_1:22679089-22679108 None:intergenic 25.0%
! TAAAAATTCTGTCTCTTATG+TGG + chr1_1:22679886-22679905 Msa0014300:CDS 25.0%
!! GAACCAATTTTTGTACAATT+TGG - chr1_1:22679913-22679932 None:intergenic 25.0%
!!! TATATAGTATGCTTTTGAAG+TGG + chr1_1:22680084-22680103 Msa0014300:intron 25.0%
! TCTCTAAATCATGGTTTAAT+TGG + chr1_1:22680375-22680394 Msa0014300:intron 25.0%
! AATGAATATTAATGAAGGCA+AGG + chr1_1:22680669-22680688 Msa0014300:intron 25.0%
!! TCTTTTATAGTCACAAACTA+TGG - chr1_1:22681106-22681125 None:intergenic 25.0%
!!! AAAATGAAAGTGTTAAAACG+AGG + chr1_1:22681297-22681316 Msa0014300:intron 25.0%
!!! AATAAAAAGCAAACTTGCTA+AGG + chr1_1:22681456-22681475 Msa0014300:CDS 25.0%
!!! ATAACTTTATTTTTTGAGGG+GGG + chr1_1:22681540-22681559 Msa0014300:intron 25.0%
!!! TTTTAGTTGACAAATCTGTT+GGG - chr1_1:22681657-22681676 None:intergenic 25.0%
! ATGCATATATAAAAGTGGAT+AGG + chr1_1:22681741-22681760 Msa0014300:intron 25.0%
!!! GAATTTTTTTTATATGGCTC+AGG - chr1_1:22681864-22681883 None:intergenic 25.0%
!!! ACATTGGTTTTTCTTTTTAC+AGG + chr1_1:22681940-22681959 Msa0014300:intron 25.0%
! TAATAATATGGCTAATAGTC+TGG - chr1_1:22682445-22682464 None:intergenic 25.0%
! TATATTAGATGAGTCATAAG+GGG - chr1_1:22682745-22682764 None:intergenic 25.0%
! GTTATATTAGATGAGTCATA+AGG - chr1_1:22682747-22682766 None:intergenic 25.0%
! ATTCCGTACATGAATATATA+AGG - chr1_1:22682777-22682796 None:intergenic 25.0%
! CATATAAGGTTATAGATCAA+TGG + chr1_1:22682888-22682907 Msa0014300:intron 25.0%
! GAGAAATGAATATTTGTACT+AGG - chr1_1:22683040-22683059 None:intergenic 25.0%
! GTTGCTATAGCTATATATAT+TGG + chr1_1:22683132-22683151 Msa0014300:intron 25.0%
! CTAATAGTGGTATAGTAATT+TGG - chr1_1:22683356-22683375 None:intergenic 25.0%
!! AAGAATTAAACACCAACTTT+TGG - chr1_1:22683399-22683418 None:intergenic 25.0%
!!! AGTAATTGATTCGTTAAACT+TGG - chr1_1:22683464-22683483 None:intergenic 25.0%
!!! GTCTCAAACTATTTTTAAGT+TGG + chr1_1:22683491-22683510 Msa0014300:intron 25.0%
!! TTTAACATCTCCAATTTTTG+TGG - chr1_1:22683888-22683907 None:intergenic 25.0%
!! CACAATAAATCTTTGGTTTA+AGG + chr1_1:22683944-22683963 Msa0014300:intron 25.0%
!! AAGACAATATTTCCTTTTGT+GGG + chr1_1:22684180-22684199 Msa0014300:intron 25.0%
! ATTCATTCAACTACAATTCA+AGG - chr1_1:22684589-22684608 None:intergenic 25.0%
! GAATGAATATACATCTTTCT+TGG + chr1_1:22684601-22684620 Msa0014300:intron 25.0%
! TTGGTGTAATGTTAAAAAGA+CGG + chr1_1:22684822-22684841 Msa0014300:intron 25.0%
! AGAAAAAAAATTAGGGTGAA+AGG - chr1_1:22684952-22684971 None:intergenic 25.0%
! TGATATCTATTACTGTTGAT+AGG - chr1_1:22685030-22685049 None:intergenic 25.0%
! GTTTATCGTATCATGTTTAA+TGG - chr1_1:22685146-22685165 None:intergenic 25.0%
! ATTTATTTCACTATGCATCT+AGG + chr1_1:22685185-22685204 Msa0014300:intron 25.0%
! AAGGGTTATTTATCATGTAT+TGG - chr1_1:22685226-22685245 None:intergenic 25.0%
!!! ACTCTTTTTTCGTATGAATA+TGG - chr1_1:22685488-22685507 None:intergenic 25.0%
! TTATTATTTCAAGAATGAGG+TGG - chr1_1:22685774-22685793 None:intergenic 25.0%
!!! GTTTTCTTCATTTTGGTTTT+AGG - chr1_1:22685903-22685922 None:intergenic 25.0%
! AAAATGAAGAAAACACAACA+GGG + chr1_1:22685909-22685928 Msa0014300:intron 25.0%
!! TCTTTTATACGAATGTTCTT+TGG - chr1_1:22685988-22686007 None:intergenic 25.0%
! AAATGTTGGTATCATAAACT+TGG - chr1_1:22686013-22686032 None:intergenic 25.0%
! TAACTTACAATCAACAACAA+TGG + chr1_1:22686161-22686180 Msa0014300:intron 25.0%
!! TGTCATTTGTGTGAATATAT+TGG + chr1_1:22686455-22686474 Msa0014300:intron 25.0%
! ACATGCAATTAAACTTAACA+TGG - chr1_1:22686613-22686632 None:intergenic 25.0%
! TTAATTGCATGTAGAACTTA+TGG + chr1_1:22686621-22686640 Msa0014300:intron 25.0%
!! TATTTGTGTGACTTTTACTA+GGG - chr1_1:22686783-22686802 None:intergenic 25.0%
! CAAAAGCAGAAAAATATATG+AGG + chr1_1:22687143-22687162 Msa0014300:intron 25.0%
! TAAAATGGAAAAAACTGGAA+AGG + chr1_1:22687257-22687276 Msa0014300:intron 25.0%
!!! ATTGGTCTTTCAGAATATTT+GGG - chr1_1:22687479-22687498 None:intergenic 25.0%
! TTAATTCCACCGAATTAATA+AGG + chr1_1:22687525-22687544 Msa0014300:intron 25.0%
! CAAATTTCACAATTAAAAGG+AGG + chr1_1:22687662-22687681 Msa0014300:intron 25.0%
! CATTAATTACATGGAATTAG+AGG + chr1_1:22687709-22687728 Msa0014300:intron 25.0%
! ACTTACTCTTAAAGCTTATT+AGG - chr1_1:22687763-22687782 None:intergenic 25.0%
! ATATTTAAGCAAAATTTGCC+TGG + chr1_1:22687805-22687824 Msa0014300:intron 25.0%
!!! TTGCTTTAAGATTAGGTTTT+AGG + chr1_1:22687910-22687929 Msa0014300:intron 25.0%
! CATAGAAAATATAGATGAGA+GGG - chr1_1:22688193-22688212 None:intergenic 25.0%
! TCATAGAAAATATAGATGAG+AGG - chr1_1:22688194-22688213 None:intergenic 25.0%
!! TCTCATCTATATTTTCTATG+AGG + chr1_1:22688193-22688212 Msa0014300:intron 25.0%
!! TCTATATTTTCTATGAGGAT+TGG + chr1_1:22688198-22688217 Msa0014300:intron 25.0%
! TTGGATTCATAACAAATTGT+GGG - chr1_1:22688342-22688361 None:intergenic 25.0%
!!! ATCTACAAAAGAAAGTGTTA+GGG - chr1_1:22688371-22688390 None:intergenic 25.0%
!!! TATCTACAAAAGAAAGTGTT+AGG - chr1_1:22688372-22688391 None:intergenic 25.0%
! TGTCTCAATTGTTACATATA+TGG - chr1_1:22688534-22688553 None:intergenic 25.0%
! ATAATAGTCAAAGAATAGAG+GGG - chr1_1:22688765-22688784 None:intergenic 25.0%
! AAGTTATAACATGGAAAAGA+GGG - chr1_1:22688949-22688968 None:intergenic 25.0%
! TAAGTTATAACATGGAAAAG+AGG - chr1_1:22688950-22688969 None:intergenic 25.0%
!! TTTCTTTCTTAGATTTTCTC+CGG - chr1_1:22689089-22689108 None:intergenic 25.0%
! TTATCCATTCAAAATACAAG+AGG + chr1_1:22689315-22689334 Msa0014300:intron 25.0%
!!! TTCTTTAGAGTTATCTTTAC+TGG - chr1_1:22689518-22689537 None:intergenic 25.0%
TTAGGAAAATGTTTCATAGG+TGG - chr1_1:22678917-22678936 None:intergenic 30.0%
TGCTTAGGAAAATGTTTCAT+AGG - chr1_1:22678920-22678939 None:intergenic 30.0%
GGAATAGATAGTGATGAATA+TGG - chr1_1:22679050-22679069 None:intergenic 30.0%
TAGCTATTTATAGAGGGAAA+GGG - chr1_1:22679083-22679102 None:intergenic 30.0%
TTAGCTATTTATAGAGGGAA+AGG - chr1_1:22679084-22679103 None:intergenic 30.0%
GTTGTGTTAGCTATTTATAG+AGG - chr1_1:22679090-22679109 None:intergenic 30.0%
CAAAACAATAAGGTGAAAGA+TGG - chr1_1:22679115-22679134 None:intergenic 30.0%
GTTGAGTGTACAAAACAATA+AGG - chr1_1:22679125-22679144 None:intergenic 30.0%
AGAGGAGCAATATAATGAAA+GGG - chr1_1:22679208-22679227 None:intergenic 30.0%
AAGAGGAGCAATATAATGAA+AGG - chr1_1:22679209-22679228 None:intergenic 30.0%
AAGGAAGGAGAATAAAAAAG+AGG - chr1_1:22679226-22679245 None:intergenic 30.0%
AAAGTTTGTCTTTGTCTCTA+TGG - chr1_1:22679268-22679287 None:intergenic 30.0%
!! ATTTTGAGTGTAGAGTTTGA+GGG - chr1_1:22679330-22679349 None:intergenic 30.0%
!! ATTTACATGGTTCTAAGTTG+CGG + chr1_1:22679494-22679513 Msa0014300:intron 30.0%
ATATTCAAGACACACATACT+AGG + chr1_1:22679671-22679690 Msa0014300:CDS 30.0%
!!! ACAGAATTTTTAAGTGTGGA+AGG - chr1_1:22679878-22679897 None:intergenic 30.0%
!!! AGAGACAGAATTTTTAAGTG+TGG - chr1_1:22679882-22679901 None:intergenic 30.0%
GGACCAAATTGTACAAAAAT+TGG + chr1_1:22679907-22679926 Msa0014300:CDS 30.0%
! TACAAAAATTGGTTCCAACT+TGG + chr1_1:22679918-22679937 Msa0014300:CDS 30.0%
! ACAAAAATTGGTTCCAACTT+GGG + chr1_1:22679919-22679938 Msa0014300:CDS 30.0%
CATCTCATTTATTTCACCAA+AGG - chr1_1:22680122-22680141 None:intergenic 30.0%
CTTTGGTGAAATAAATGAGA+TGG + chr1_1:22680120-22680139 Msa0014300:CDS 30.0%
AAGAGAATTGTATCATTGCT+TGG + chr1_1:22680156-22680175 Msa0014300:CDS 30.0%
TCTTATCCTTTAAATCTCCA+TGG + chr1_1:22680193-22680212 Msa0014300:CDS 30.0%
TTACACAATGATGCATCTTA+TGG - chr1_1:22680281-22680300 None:intergenic 30.0%
GAATTGACATGTTCAACAAT+TGG - chr1_1:22680542-22680561 None:intergenic 30.0%
AATATTAATGAAGGCAAGGA+AGG + chr1_1:22680673-22680692 Msa0014300:intron 30.0%
! TGAGAGTATAAAGAGCATAA+TGG + chr1_1:22680703-22680722 Msa0014300:CDS 30.0%
!!! TAACATTTTGGGATCATGTA+AGG - chr1_1:22680998-22681017 None:intergenic 30.0%
!! CTTTTAGTTGACAAATCTGT+TGG - chr1_1:22681658-22681677 None:intergenic 30.0%
!! CCACTTTTATATATGCATCA+AGG - chr1_1:22681739-22681758 None:intergenic 30.0%
CCTTGATGCATATATAAAAG+TGG + chr1_1:22681736-22681755 Msa0014300:intron 30.0%
ATTGAATAGTGATGACCTAA+CGG + chr1_1:22682318-22682337 Msa0014300:intron 30.0%
ACGTTTATTCAAATTCCGTT+AGG - chr1_1:22682336-22682355 None:intergenic 30.0%
! TAAGAACATGAGTTTAAAGC+TGG - chr1_1:22682411-22682430 None:intergenic 30.0%
CACTAACAACCAAGTAAAAT+GGG + chr1_1:22682517-22682536 Msa0014300:intron 30.0%
! TGATGAATACTTCTAAAGAG+TGG - chr1_1:22682660-22682679 None:intergenic 30.0%
TTCTTACCTCAAATCTTGAA+GGG - chr1_1:22682719-22682738 None:intergenic 30.0%
ATTCTTACCTCAAATCTTGA+AGG - chr1_1:22682720-22682739 None:intergenic 30.0%
GATAAAATATTAACCCCTCT+TGG - chr1_1:22682856-22682875 None:intergenic 30.0%
TCCTTTGTCAGAAACATATA+AGG + chr1_1:22682874-22682893 Msa0014300:intron 30.0%
! ACCTTATATGTTTCTGACAA+AGG - chr1_1:22682878-22682897 None:intergenic 30.0%
AACATTGAATCACCTATCTA+GGG - chr1_1:22682967-22682986 None:intergenic 30.0%
AAACATTGAATCACCTATCT+AGG - chr1_1:22682968-22682987 None:intergenic 30.0%
ACCAATACCATTAAGACATT+AGG + chr1_1:22683158-22683177 Msa0014300:intron 30.0%
CCAATACCATTAAGACATTA+GGG + chr1_1:22683159-22683178 Msa0014300:intron 30.0%
! GACTTAATTGGTTTATGTGA+TGG + chr1_1:22683184-22683203 Msa0014300:intron 30.0%
! ACATATATGCCATTTGGAAA+TGG + chr1_1:22683230-22683249 Msa0014300:CDS 30.0%
! TCACTTGCTTATATCCATTT+TGG - chr1_1:22683545-22683564 None:intergenic 30.0%
ATGGATATAAGCAAGTGATT+TGG + chr1_1:22683547-22683566 Msa0014300:intron 30.0%
AGGGATTTATTAAACTGTTG+AGG + chr1_1:22683717-22683736 Msa0014300:intron 30.0%
! CTTATCTCTCAAGCTTTTAT+GGG - chr1_1:22683762-22683781 None:intergenic 30.0%
! ACTTATCTCTCAAGCTTTTA+TGG - chr1_1:22683763-22683782 None:intergenic 30.0%
TTTCATCATCGTTTACTTTC+TGG + chr1_1:22683796-22683815 Msa0014300:intron 30.0%
GTTGAGATATCCACAAAAAT+TGG + chr1_1:22683875-22683894 Msa0014300:intron 30.0%
! ATCAAGTGATTTAGCTTAAG+TGG - chr1_1:22684313-22684332 None:intergenic 30.0%
CTTAAGCTAAATCACTTGAT+TGG + chr1_1:22683980-22683999 Msa0014300:intron 30.0%
! CAAGACAATATTTCCTTTTG+TGG + chr1_1:22684179-22684198 Msa0014300:intron 30.0%
CTTAAGCTAAATCACTTGAT+TGG - chr1_1:22683980-22683999 None:intergenic 30.0%
! ATCAAGTGATTTAGCTTAAG+TGG + chr1_1:22684313-22684332 Msa0014300:intron 30.0%
!!! TTCACGAACGATTTGTTTTA+AGG - chr1_1:22684349-22684368 None:intergenic 30.0%
CGTTCGTGAAAACTTTAATT+TGG + chr1_1:22684359-22684378 Msa0014300:intron 30.0%
!! AAAATTAGTTTGTCTCCTAG+TGG + chr1_1:22684456-22684475 Msa0014300:intron 30.0%
!! AAATTAGTTTGTCTCCTAGT+GGG + chr1_1:22684457-22684476 Msa0014300:intron 30.0%
ATTCAACTACAATTCAAGGA+AGG - chr1_1:22684585-22684604 None:intergenic 30.0%
! ACTCTACACACTATTTTCTT+TGG - chr1_1:22684651-22684670 None:intergenic 30.0%
AAGAAAATAGTGTGTAGAGT+CGG + chr1_1:22684651-22684670 Msa0014300:intron 30.0%
GAAATACATGATCATTGATG+AGG - chr1_1:22684679-22684698 None:intergenic 30.0%
TTGCTACTGACAAAAAAAAC+AGG + chr1_1:22684780-22684799 Msa0014300:intron 30.0%
TTAACATTACACCAAGACTT+TGG - chr1_1:22684817-22684836 None:intergenic 30.0%
! AAGGTCTCTTTTACTTTGAT+AGG + chr1_1:22684919-22684938 Msa0014300:intron 30.0%
! AGGTCTCTTTTACTTTGATA+GGG + chr1_1:22684920-22684939 Msa0014300:intron 30.0%
AGAGTGATGCTATTATCAAA+GGG - chr1_1:22685244-22685263 None:intergenic 30.0%
! TTAGTCAAAGGAACTTTTCA+TGG + chr1_1:22685360-22685379 Msa0014300:intron 30.0%
! TAGTCAAAGGAACTTTTCAT+GGG + chr1_1:22685361-22685380 Msa0014300:intron 30.0%
ATTGCAGATTTATGAAGTTG+AGG - chr1_1:22685584-22685603 None:intergenic 30.0%
ATGAATTTGGAGGATTGTTA+TGG - chr1_1:22685653-22685672 None:intergenic 30.0%
! CTGTTGTGTTTTCTTCATTT+TGG - chr1_1:22685910-22685929 None:intergenic 30.0%
CAAAATGAAGAAAACACAAC+AGG + chr1_1:22685908-22685927 Msa0014300:intron 30.0%
TGAAGATTAAGGCAAAATGT+TGG - chr1_1:22686027-22686046 None:intergenic 30.0%
GATAGAGTTGTTGAAGATTA+AGG - chr1_1:22686038-22686057 None:intergenic 30.0%
AATAAAAGAACTCCAACTCA+AGG + chr1_1:22686116-22686135 Msa0014300:intron 30.0%
ACAACAATGGTTCAATGAAA+TGG + chr1_1:22686174-22686193 Msa0014300:intron 30.0%
TGAAAACCGATAGAAAAGTT+TGG + chr1_1:22686297-22686316 Msa0014300:intron 30.0%
! CAACTATACAACCAATTTTC+TGG + chr1_1:22686701-22686720 Msa0014300:intron 30.0%
ATGATGATCTTCCAGAAAAT+TGG - chr1_1:22686715-22686734 None:intergenic 30.0%
! CTATTTGTGTGACTTTTACT+AGG - chr1_1:22686784-22686803 None:intergenic 30.0%
ATGAATGAAGTTTAGGTAAG+TGG - chr1_1:22686882-22686901 None:intergenic 30.0%
GAGAAGACAAAATCAAGTAA+AGG + chr1_1:22686935-22686954 Msa0014300:intron 30.0%
!!! GGCTGGATATTTTTTGTTTT+GGG - chr1_1:22687026-22687045 None:intergenic 30.0%
!!! TGGCTGGATATTTTTTGTTT+TGG - chr1_1:22687027-22687046 None:intergenic 30.0%
ATTGATTGTAGTTGTTTGCT+TGG - chr1_1:22687047-22687066 None:intergenic 30.0%
ACAATCAATTTCTACATACC+CGG + chr1_1:22687058-22687077 Msa0014300:intron 30.0%
AGCAGAAAAATATATGAGGA+TGG + chr1_1:22687147-22687166 Msa0014300:intron 30.0%
!! TAACATATGAGCTTGCTAAT+AGG + chr1_1:22687298-22687317 Msa0014300:intron 30.0%
TTGAAAATTAGAGAGAGGAA+GGG + chr1_1:22687324-22687343 Msa0014300:intron 30.0%
TGCATTTAATCACGTCTATT+GGG - chr1_1:22687433-22687452 None:intergenic 30.0%
!! CATTGGTCTTTCAGAATATT+TGG - chr1_1:22687480-22687499 None:intergenic 30.0%
GGAATCAGACCTTATTAATT+CGG - chr1_1:22687537-22687556 None:intergenic 30.0%
CTTAGCAAGCATTAATTACA+TGG + chr1_1:22687700-22687719 Msa0014300:intron 30.0%
TGGAATTAGAGGGAAAAATT+AGG + chr1_1:22687720-22687739 Msa0014300:intron 30.0%
! AAATAAGAACAAGTTGAACC+AGG - chr1_1:22687826-22687845 None:intergenic 30.0%
AATCTTAAAGCAAAGAACAC+TGG - chr1_1:22687903-22687922 None:intergenic 30.0%
!! GTGTTCTTTGCTTTAAGATT+AGG + chr1_1:22687903-22687922 Msa0014300:intron 30.0%
TTAGTTAAGTGGCTACAAAA+AGG - chr1_1:22688041-22688060 None:intergenic 30.0%
! TTTGAGTTCACAAGCAAATT+TGG + chr1_1:22688134-22688153 Msa0014300:intron 30.0%
CTTGGATTCATAACAAATTG+TGG - chr1_1:22688343-22688362 None:intergenic 30.0%
!! TCTACAAAAGAAAGTGTTAG+GGG - chr1_1:22688370-22688389 None:intergenic 30.0%
ATTAATGAAAGGAATGCTTG+TGG + chr1_1:22688564-22688583 Msa0014300:intron 30.0%
TGCAATTGCAAAATACCAAT+AGG - chr1_1:22688802-22688821 None:intergenic 30.0%
AACCATTCAAATGCTTGAAA+TGG - chr1_1:22688912-22688931 None:intergenic 30.0%
GGAAAAGAGGGATATAAATT+TGG - chr1_1:22688937-22688956 None:intergenic 30.0%
ATTAGTATAGTATGAGACAG+AGG + chr1_1:22689283-22689302 Msa0014300:intron 30.0%
AATGGAGATGGAATTCAATA+TGG + chr1_1:22689464-22689483 Msa0014300:CDS 30.0%
! TTTACTGGTAATCCATGTTT+TGG - chr1_1:22689503-22689522 None:intergenic 30.0%
! GAGATTCTTTTCCCATTTAT+AGG + chr1_1:22689642-22689661 Msa0014300:three_prime_UTR 30.0%
!!! GGAAATAGTTTTGTCTCATT+AGG - chr1_1:22689668-22689687 None:intergenic 30.0%
ATGTTTCATAGGTGGCAAAA+GGG - chr1_1:22678909-22678928 None:intergenic 35.0%
AATGTTTCATAGGTGGCAAA+AGG - chr1_1:22678910-22678929 None:intergenic 35.0%
AACAATAAGGTGAAAGATGG+CGG - chr1_1:22679112-22679131 None:intergenic 35.0%
!! GATTTTGAGTGTAGAGTTTG+AGG - chr1_1:22679331-22679350 None:intergenic 35.0%
AGTATGTATCTCTCGTTTCT+TGG + chr1_1:22679442-22679461 Msa0014300:intron 35.0%
CATGTGCACCACAATATAAA+AGG - chr1_1:22679605-22679624 None:intergenic 35.0%
TGTTGAAAGAACAAAGCTTC+TGG - chr1_1:22679806-22679825 None:intergenic 35.0%
!! GAAGCTTTGTTCTTTCAACA+AGG + chr1_1:22679806-22679825 Msa0014300:CDS 35.0%
AAGTGTGGAAGGTAAAAAAG+AGG - chr1_1:22679867-22679886 None:intergenic 35.0%
!! AACCTTTTTCATCTCTTGCA+AGG - chr1_1:22679963-22679982 None:intergenic 35.0%
ATTGTATCATTGCTTGGAGA+AGG + chr1_1:22680162-22680181 Msa0014300:CDS 35.0%
TTGTATCATTGCTTGGAGAA+GGG + chr1_1:22680163-22680182 Msa0014300:CDS 35.0%
GAAGTTCCATGGAGATTTAA+AGG - chr1_1:22680202-22680221 None:intergenic 35.0%
ATCTCCATGGAACTTCATAT+TGG + chr1_1:22680206-22680225 Msa0014300:CDS 35.0%
!! TTCATATTGGAAGGCATTGA+AGG + chr1_1:22680219-22680238 Msa0014300:CDS 35.0%
CCATGATTTAGAGATCTCAA+CGG - chr1_1:22680369-22680388 None:intergenic 35.0%
! AAGATTGAACCGAGTTGAAT+TGG - chr1_1:22680486-22680505 None:intergenic 35.0%
!!! GTTTTAAAAATCGAATCGGC+CGG - chr1_1:22680576-22680595 None:intergenic 35.0%
! GAGCATAATGGAAAGAAGAA+AGG + chr1_1:22680715-22680734 Msa0014300:CDS 35.0%
CAAGTGGCTGATAATATCAT+TGG + chr1_1:22680821-22680840 Msa0014300:CDS 35.0%
! TATTTTACCCTGCTTGTGAA+GGG - chr1_1:22681520-22681539 None:intergenic 35.0%
!! TTATTTTACCCTGCTTGTGA+AGG - chr1_1:22681521-22681540 None:intergenic 35.0%
AGTTTAGCTAGGTGAACATT+TGG - chr1_1:22681841-22681860 None:intergenic 35.0%
! TTACTTGTACATTGGCTAAG+AGG + chr1_1:22682169-22682188 Msa0014300:intron 35.0%
GTTAGGTCATCACTATTCAA+TGG - chr1_1:22682319-22682338 None:intergenic 35.0%
! AACATGAGTTTAAAGCTGGA+GGG - chr1_1:22682407-22682426 None:intergenic 35.0%
GCACTAACAACCAAGTAAAA+TGG + chr1_1:22682516-22682535 Msa0014300:intron 35.0%
AACCAAGTAAAATGGGAATC+AGG + chr1_1:22682524-22682543 Msa0014300:intron 35.0%
! GAATACTTCTAAAGAGTGGA+AGG - chr1_1:22682656-22682675 None:intergenic 35.0%
! ATTTTCATGTAGCTACCAAG+AGG + chr1_1:22682838-22682857 Msa0014300:intron 35.0%
! TTTTCATGTAGCTACCAAGA+GGG + chr1_1:22682839-22682858 Msa0014300:intron 35.0%
ATATGAATCTTCCCCTAGAT+AGG + chr1_1:22682952-22682971 Msa0014300:intron 35.0%
ACATTGAATCACCTATCTAG+GGG - chr1_1:22682966-22682985 None:intergenic 35.0%
CCCTAATGTCTTAATGGTAT+TGG - chr1_1:22683162-22683181 None:intergenic 35.0%
AGTCAACCCTAATGTCTTAA+TGG - chr1_1:22683168-22683187 None:intergenic 35.0%
! GACATTAGGGTTGACTTAAT+TGG + chr1_1:22683172-22683191 Msa0014300:intron 35.0%
CCAAATGGCATATATGTGTT+TGG - chr1_1:22683227-22683246 None:intergenic 35.0%
CCAAACACATATATGCCATT+TGG + chr1_1:22683224-22683243 Msa0014300:CDS 35.0%
! GTGGTATAGTAATTTGGTGA+GGG - chr1_1:22683350-22683369 None:intergenic 35.0%
! AGTGGTATAGTAATTTGGTG+AGG - chr1_1:22683351-22683370 None:intergenic 35.0%
! AGTTGGTTCAGTTCATTATC+AGG + chr1_1:22683508-22683527 Msa0014300:intron 35.0%
!! AGCAAGTGATTTGGTTTAAG+TGG + chr1_1:22683556-22683575 Msa0014300:intron 35.0%
! GGATAATTGTATTGGTGTAG+TGG + chr1_1:22683693-22683712 Msa0014300:intron 35.0%
! AATTGTATTGGTGTAGTGGA+AGG + chr1_1:22683697-22683716 Msa0014300:intron 35.0%
! ATTGTATTGGTGTAGTGGAA+GGG + chr1_1:22683698-22683717 Msa0014300:intron 35.0%
ATGCTTAAACAATGCCCTAA+GGG - chr1_1:22684090-22684109 None:intergenic 35.0%
AATGCTTAAACAATGCCCTA+AGG - chr1_1:22684091-22684110 None:intergenic 35.0%
TTGTTTAAGGAACCCACAAA+AGG - chr1_1:22684195-22684214 None:intergenic 35.0%
TTCCTTAAACAATGCCCTTA+GGG + chr1_1:22684203-22684222 Msa0014300:intron 35.0%
!! AATTAGTTTGTCTCCTAGTG+GGG + chr1_1:22684458-22684477 Msa0014300:intron 35.0%
AGAAAATAGTGTGTAGAGTC+GGG + chr1_1:22684652-22684671 Msa0014300:intron 35.0%
ATTTCATACATACGTGTACG+TGG + chr1_1:22684694-22684713 Msa0014300:intron 35.0%
TGATGTGTTAAGGAAACGTT+TGG - chr1_1:22684747-22684766 None:intergenic 35.0%
ACATGTGCAATGATGTGTTA+AGG - chr1_1:22684757-22684776 None:intergenic 35.0%
GAGAGTGATGCTATTATCAA+AGG - chr1_1:22685245-22685264 None:intergenic 35.0%
AACAAAAAGGCGATTCACTA+TGG + chr1_1:22685300-22685319 Msa0014300:intron 35.0%
ACAAAAAGGCGATTCACTAT+GGG + chr1_1:22685301-22685320 Msa0014300:intron 35.0%
AAGACTATGGTTCTTCAATG+TGG - chr1_1:22685448-22685467 None:intergenic 35.0%
! GCAATCTAAGACTAAGACTA+TGG - chr1_1:22685461-22685480 None:intergenic 35.0%
!!! GGTGTTGCTGTAAGAAATTT+TGG - chr1_1:22685632-22685651 None:intergenic 35.0%
GATATGCAACAACAGAAAAG+TGG + chr1_1:22685836-22685855 Msa0014300:intron 35.0%
AGAGTTTATGTACCTTGAGT+TGG - chr1_1:22686131-22686150 None:intergenic 35.0%
! CCTTGACCAAACTTTTCTAT+CGG - chr1_1:22686306-22686325 None:intergenic 35.0%
! TGGTCAAGGTTTTCCAAAAA+AGG + chr1_1:22686317-22686336 Msa0014300:intron 35.0%
! TTGGCTCAAATTTTATGCGT+CGG + chr1_1:22686474-22686493 Msa0014300:intron 35.0%
! TTCCGATGACAATGTTTTAC+AGG + chr1_1:22686652-22686671 Msa0014300:intron 35.0%
CTCCTGTAAAACATTGTCAT+CGG - chr1_1:22686657-22686676 None:intergenic 35.0%
TGTTCGCGTCTGTATATTAT+TGG - chr1_1:22686683-22686702 None:intergenic 35.0%
GGGAAGAAAAAAAACGAATG+AGG - chr1_1:22686763-22686782 None:intergenic 35.0%
CAATCAATTTCTACATACCC+GGG + chr1_1:22687059-22687078 Msa0014300:intron 35.0%
GTTTCAATCTGTTTCAAGCA+TGG - chr1_1:22687124-22687143 None:intergenic 35.0%
AGAGAAAGCAAATGAGATGA+AGG + chr1_1:22687192-22687211 Msa0014300:intron 35.0%
GAGAAAGCAAATGAGATGAA+GGG + chr1_1:22687193-22687212 Msa0014300:intron 35.0%
GGAACTTGAAAATTAGAGAG+AGG + chr1_1:22687319-22687338 Msa0014300:intron 35.0%
CTTGAAAATTAGAGAGAGGA+AGG + chr1_1:22687323-22687342 Msa0014300:intron 35.0%
! AAAGCTGTATGGTTTTCCAT+GGG + chr1_1:22687397-22687416 Msa0014300:intron 35.0%
AATCACGTCTATTGGGAATT+GGG - chr1_1:22687426-22687445 None:intergenic 35.0%
TAATCACGTCTATTGGGAAT+TGG - chr1_1:22687427-22687446 None:intergenic 35.0%
CTGCATTTAATCACGTCTAT+TGG - chr1_1:22687434-22687453 None:intergenic 35.0%
TCTGAAAGACCAATGTATCA+CGG + chr1_1:22687485-22687504 Msa0014300:intron 35.0%
ATCAGACCTTATTAATTCGG+TGG - chr1_1:22687534-22687553 None:intergenic 35.0%
TGCAGTAAATGAGAGTTATG+TGG - chr1_1:22687596-22687615 None:intergenic 35.0%
CCACTTAACTAATGAACCAA+CGG + chr1_1:22688049-22688068 Msa0014300:intron 35.0%
!!! GTGAGGTTTTGAGTTATTCT+GGG - chr1_1:22688160-22688179 None:intergenic 35.0%
!!! TGTGAGGTTTTGAGTTATTC+TGG - chr1_1:22688161-22688180 None:intergenic 35.0%
! GTTGTTGGATCGATTTCAAA+TGG - chr1_1:22688311-22688330 None:intergenic 35.0%
TAACAAATTGTGGGTAACTG+TGG - chr1_1:22688333-22688352 None:intergenic 35.0%
TTGACTATACACTAGCATCA+TGG - chr1_1:22688604-22688623 None:intergenic 35.0%
TGTTACAAAGTTGTGTGGTA+AGG - chr1_1:22688703-22688722 None:intergenic 35.0%
CACCATTTCAAGCATTTGAA+TGG + chr1_1:22688907-22688926 Msa0014300:intron 35.0%
TAACCAAAACTTAGTCTCTC+CGG + chr1_1:22689051-22689070 Msa0014300:intron 35.0%
!! GACACCTCTTGTATTTTGAA+TGG - chr1_1:22689322-22689341 None:intergenic 35.0%
!! TGAACTCATCCATGTTTTGA+TGG + chr1_1:22689414-22689433 Msa0014300:intron 35.0%
AAAGCAACACCATCAAAACA+TGG - chr1_1:22689426-22689445 None:intergenic 35.0%
!!! TGTTTTGATGGTGTTGCTTT+AGG + chr1_1:22689426-22689445 Msa0014300:intron 35.0%
TTCAGAAAATGAGAGCAAAG+TGG + chr1_1:22689551-22689570 Msa0014300:three_prime_UTR 35.0%
TCAGAAAATGAGAGCAAAGT+GGG + chr1_1:22689552-22689571 Msa0014300:three_prime_UTR 35.0%
CATGCAATTTGTAGCATGTT+AGG + chr1_1:22689577-22689596 Msa0014300:three_prime_UTR 35.0%
GTCTCATTAGGCCTATAAAT+GGG - chr1_1:22689656-22689675 None:intergenic 35.0%
TGTCTCATTAGGCCTATAAA+TGG - chr1_1:22689657-22689676 None:intergenic 35.0%
GAGACAAAACTATTTCCCAT+TGG + chr1_1:22689671-22689690 Msa0014300:three_prime_UTR 35.0%
ACATGCGTAATGAGTGTCAT+GGG - chr1_1:22678879-22678898 None:intergenic 40.0%
! TAGTGAAAGTTAAGGGGTGT+CGG - chr1_1:22678987-22679006 None:intergenic 40.0%
AAGTGATGTGAAGAGTTGCA+TGG - chr1_1:22679159-22679178 None:intergenic 40.0%
TTCTCCTTCCTTTCCTTCAA+TGG + chr1_1:22679234-22679253 Msa0014300:CDS 40.0%
TGTTTCCACCATTGAAGGAA+AGG - chr1_1:22679245-22679264 None:intergenic 40.0%
TATGGTGTTTCCACCATTGA+AGG - chr1_1:22679250-22679269 None:intergenic 40.0%
! AAAGACAAACTTTTACCCCC+TGG + chr1_1:22679275-22679294 Msa0014300:CDS 40.0%
CTTGTGGAGAAGAAGGAATT+TGG - chr1_1:22679353-22679372 None:intergenic 40.0%
CAAATTCCTTCTTCTCCACA+AGG + chr1_1:22679351-22679370 Msa0014300:CDS 40.0%
! TGTATACCTTTTCTGCCTTG+TGG - chr1_1:22679369-22679388 None:intergenic 40.0%
GTAGTAAAATATGGCCGATG+TGG + chr1_1:22679545-22679564 Msa0014300:intron 40.0%
GGACTTGATATCATCACACA+AGG - chr1_1:22679701-22679720 None:intergenic 40.0%
TGTGATGATATCAAGTCCTG+AGG + chr1_1:22679703-22679722 Msa0014300:CDS 40.0%
TCATCTTCTCTTTGCTTGGA+GGG - chr1_1:22679778-22679797 None:intergenic 40.0%
ATCATCTTCTCTTTGCTTGG+AGG - chr1_1:22679779-22679798 None:intergenic 40.0%
CCTATCATCTTCTCTTTGCT+TGG - chr1_1:22679782-22679801 None:intergenic 40.0%
CCAAGCAAAGAGAAGATGAT+AGG + chr1_1:22679779-22679798 Msa0014300:CDS 40.0%
! TTGAACTAGCTTCTTGAGCA+TGG - chr1_1:22679843-22679862 None:intergenic 40.0%
! ATGGTTCTATTAGCCCAAGT+TGG - chr1_1:22679935-22679954 None:intergenic 40.0%
CTCCTTGCAAGAGATGAAAA+AGG + chr1_1:22679958-22679977 Msa0014300:CDS 40.0%
CCTTCCAATATGAAGTTCCA+TGG - chr1_1:22680213-22680232 None:intergenic 40.0%
CCATGGAACTTCATATTGGA+AGG + chr1_1:22680210-22680229 Msa0014300:CDS 40.0%
CCGTTGAGATCTCTAAATCA+TGG + chr1_1:22680366-22680385 Msa0014300:intron 40.0%
AAAACTAGTTGAACCAACCG+CGG + chr1_1:22680455-22680474 Msa0014300:intron 40.0%
GTCAATTCAACTAGTTGAGC+CGG + chr1_1:22680554-22680573 Msa0014300:intron 40.0%
AGAAAGGAGAGCAGGAATTA+TGG + chr1_1:22680731-22680750 Msa0014300:CDS 40.0%
!! AATTATGGTGGTGGGTTGTT+GGG + chr1_1:22680746-22680765 Msa0014300:CDS 40.0%
TTGTTGGGAATTCTGTTGAG+AGG + chr1_1:22680761-22680780 Msa0014300:CDS 40.0%
CCACTTGAGAATCAGTTAGT+TGG - chr1_1:22680808-22680827 None:intergenic 40.0%
! CCAACTAACTGATTCTCAAG+TGG + chr1_1:22680805-22680824 Msa0014300:CDS 40.0%
CACAGCTAGTGTTCTAACAT+GGG + chr1_1:22680868-22680887 Msa0014300:CDS 40.0%
GCATGACAATGTCAATCTCT+TGG + chr1_1:22680904-22680923 Msa0014300:CDS 40.0%
!! AAACTTGCTAAGGAAAGTCG+TGG + chr1_1:22681466-22681485 Msa0014300:CDS 40.0%
GTGTCAATTTGACGTCTTCA+AGG - chr1_1:22681685-22681704 None:intergenic 40.0%
TATTATCGGATCACACGAGT+TGG - chr1_1:22682285-22682304 None:intergenic 40.0%
! GAACATGAGTTTAAAGCTGG+AGG - chr1_1:22682408-22682427 None:intergenic 40.0%
! GACCTGATTCCCATTTTACT+TGG - chr1_1:22682529-22682548 None:intergenic 40.0%
TTGCACTTCTTAACGTCTCT+TGG - chr1_1:22682554-22682573 None:intergenic 40.0%
TAGAGAAGCAGTTAGAGATG+TGG + chr1_1:22682593-22682612 Msa0014300:CDS 40.0%
GTTAGAGATGTGGAACTACA+AGG + chr1_1:22682603-22682622 Msa0014300:CDS 40.0%
CAAGGTTACTCCATTCCAAA+AGG + chr1_1:22682621-22682640 Msa0014300:CDS 40.0%
GTTACTCCATTCCAAAAGGT+TGG + chr1_1:22682625-22682644 Msa0014300:CDS 40.0%
!! GACTTTCCAACCTTTTGGAA+TGG - chr1_1:22682634-22682653 None:intergenic 40.0%
GTTTGACCCTTCAAGATTTG+AGG + chr1_1:22682710-22682729 Msa0014300:CDS 40.0%
TTTCATGTAGCTACCAAGAG+GGG + chr1_1:22682840-22682859 Msa0014300:intron 40.0%
ATATATGTGTTTGGTCGAGG+TGG - chr1_1:22683218-22683237 None:intergenic 40.0%
! TACCTCAAGTTCGATTCGTT+TGG + chr1_1:22683430-22683449 Msa0014300:intron 40.0%
AACCAAACGAATCGAACTTG+AGG - chr1_1:22683435-22683454 None:intergenic 40.0%
AGGTCTACTAGACACCAAAA+TGG + chr1_1:22683528-22683547 Msa0014300:intron 40.0%
! CAAGCTTTTATGGGTAGTCA+TGG - chr1_1:22683753-22683772 None:intergenic 40.0%
GTTCCTTAAACAATGCCCTT+AGG + chr1_1:22684202-22684221 Msa0014300:intron 40.0%
GGATAGTGTTCCTTAAGATG+TGG + chr1_1:22684552-22684571 Msa0014300:intron 40.0%
TGTTCCTTAAGATGTGGAAG+TGG + chr1_1:22684558-22684577 Msa0014300:intron 40.0%
CGTATAGATCTCCAAAGTCT+TGG + chr1_1:22684803-22684822 Msa0014300:intron 40.0%
AAGACGGTCTTAAATTCGAG+AGG + chr1_1:22684838-22684857 Msa0014300:intron 40.0%
TACAACAGTTGCGATGACTT+TGG - chr1_1:22685550-22685569 None:intergenic 40.0%
CAGAAAAGTGGAGTAGCAAA+AGG + chr1_1:22685848-22685867 Msa0014300:intron 40.0%
ATCCTATGCTTTGCTTGGTT+GGG - chr1_1:22685965-22685984 None:intergenic 40.0%
TTTGGATCCTATGCTTTGCT+TGG - chr1_1:22685970-22685989 None:intergenic 40.0%
CCGATAGAAAAGTTTGGTCA+AGG + chr1_1:22686303-22686322 Msa0014300:intron 40.0%
!!! AAAACAGGAGCAGCCTTTTT+TGG - chr1_1:22686333-22686352 None:intergenic 40.0%
TTTCTTACATGCACGATGGA+TGG + chr1_1:22686541-22686560 Msa0014300:intron 40.0%
! CGATGACAATGTTTTACAGG+AGG + chr1_1:22686655-22686674 Msa0014300:intron 40.0%
ATTGTAGTTGTTTGCTTGGC+TGG - chr1_1:22687043-22687062 None:intergenic 40.0%
!! TTTTCAATCTGGAGCAGAAG+AGG - chr1_1:22687091-22687110 None:intergenic 40.0%
!!! GCATTGCAGCTTTTTCAATC+TGG - chr1_1:22687102-22687121 None:intergenic 40.0%
AAAATTAGAGAGAGGAAGGG+TGG + chr1_1:22687327-22687346 Msa0014300:intron 40.0%
TGTAACATGTGCATCTGTGT+GGG + chr1_1:22687350-22687369 Msa0014300:intron 40.0%
! GAAAGCTGTATGGTTTTCCA+TGG + chr1_1:22687396-22687415 Msa0014300:intron 40.0%
TGTTGTGAACCGTGATACAT+TGG - chr1_1:22687497-22687516 None:intergenic 40.0%
CTCATTTACTGCACACGTAT+TGG + chr1_1:22687603-22687622 Msa0014300:intron 40.0%
TGGAAATAGACACACGCATA+TGG + chr1_1:22687862-22687881 Msa0014300:intron 40.0%
!! CCGTTGGTTCATTAGTTAAG+TGG - chr1_1:22688052-22688071 None:intergenic 40.0%
ACTCAAAACCTCACACTAGT+AGG + chr1_1:22688166-22688185 Msa0014300:intron 40.0%
!!! TTTTCTATGAGGATTGGCTG+CGG + chr1_1:22688204-22688223 Msa0014300:intron 40.0%
! TGGTGTCGAGTTAAACTTGT+TGG - chr1_1:22688635-22688654 None:intergenic 40.0%
AAAGTTGTGTGGTAAGGACA+TGG - chr1_1:22688697-22688716 None:intergenic 40.0%
CCTTGTGTTACAAAGTTGTG+TGG - chr1_1:22688708-22688727 None:intergenic 40.0%
CCACACAACTTTGTAACACA+AGG + chr1_1:22688705-22688724 Msa0014300:intron 40.0%
!! TTTGATGGTGTTGCTTTAGG+TGG + chr1_1:22689429-22689448 Msa0014300:intron 40.0%
CAGAAAATGAGAGCAAAGTG+GGG + chr1_1:22689553-22689572 Msa0014300:three_prime_UTR 40.0%
GACATGCGTAATGAGTGTCA+TGG - chr1_1:22678880-22678899 None:intergenic 45.0%
ATAGGTGGCAAAAGGGAGTT+GGG - chr1_1:22678902-22678921 None:intergenic 45.0%
!! CATGTGTTCTAGTGCTGCTT+AGG - chr1_1:22678935-22678954 None:intergenic 45.0%
TCCTTCCTTTCCTTCAATGG+TGG + chr1_1:22679237-22679256 Msa0014300:CDS 45.0%
TCCACCATTGAAGGAAAGGA+AGG - chr1_1:22679241-22679260 None:intergenic 45.0%
! ACTTTTACCCCCTGGTTCAA+TGG + chr1_1:22679283-22679302 Msa0014300:CDS 45.0%
! CTTTTACCCCCTGGTTCAAT+GGG + chr1_1:22679284-22679303 Msa0014300:CDS 45.0%
!! TCAATGGGTTGGCCTTACTT+TGG + chr1_1:22679299-22679318 Msa0014300:CDS 45.0%
TTGAGGGTCTCTCCAAAGTA+AGG - chr1_1:22679314-22679333 None:intergenic 45.0%
TTTCTGCCTTGTGGAGAAGA+AGG - chr1_1:22679360-22679379 None:intergenic 45.0%
TCTTCTCCACAAGGCAGAAA+AGG + chr1_1:22679360-22679379 Msa0014300:CDS 45.0%
TGCTGCAATTTCGACCACAT+CGG - chr1_1:22679562-22679581 None:intergenic 45.0%
! TCTTTGCTTGGAGGGTATGT+TGG - chr1_1:22679770-22679789 None:intergenic 45.0%
CATCTCTTGCAAGGAGTTGA+TGG - chr1_1:22679954-22679973 None:intergenic 45.0%
! GAGTTGAATTGGTCTAACCG+CGG - chr1_1:22680475-22680494 None:intergenic 45.0%
GCGGTTAGACCAATTCAACT+CGG + chr1_1:22680474-22680493 Msa0014300:intron 45.0%
TGGAAAGAAGAAAGGAGAGC+AGG + chr1_1:22680723-22680742 Msa0014300:CDS 45.0%
AAGGAGAGCAGGAATTATGG+TGG + chr1_1:22680734-22680753 Msa0014300:CDS 45.0%
AGAGCAGGAATTATGGTGGT+GGG + chr1_1:22680738-22680757 Msa0014300:CDS 45.0%
!! GAATTATGGTGGTGGGTTGT+TGG + chr1_1:22680745-22680764 Msa0014300:CDS 45.0%
GGAATTCTGTTGAGAGGCAA+AGG + chr1_1:22680767-22680786 Msa0014300:CDS 45.0%
CCATGTTAGAACACTAGCTG+TGG - chr1_1:22680870-22680889 None:intergenic 45.0%
CCACAGCTAGTGTTCTAACA+TGG + chr1_1:22680867-22680886 Msa0014300:CDS 45.0%
AGGAAAGTCGTGGACTTTCA+TGG + chr1_1:22681476-22681495 Msa0014300:CDS 45.0%
GGAAAGTCGTGGACTTTCAT+GGG + chr1_1:22681477-22681496 Msa0014300:CDS 45.0%
TATGGCTCAGGAGTTTAGCT+AGG - chr1_1:22681852-22681871 None:intergenic 45.0%
! GGAAGGACTTTCCAACCTTT+TGG - chr1_1:22682639-22682658 None:intergenic 45.0%
TGTGGTTGAGGGAAGAAATG+AGG - chr1_1:22682687-22682706 None:intergenic 45.0%
GGTCAAACTTGTGTGGTTGA+GGG - chr1_1:22682698-22682717 None:intergenic 45.0%
CTTGAAGGGTCAAACTTGTG+TGG - chr1_1:22682705-22682724 None:intergenic 45.0%
GGCATATATGTGTTTGGTCG+AGG - chr1_1:22683221-22683240 None:intergenic 45.0%
! GAGTGGACTCCATTTCCAAA+TGG - chr1_1:22683242-22683261 None:intergenic 45.0%
!! TAGTGAGCTTGCTAAGCTTG+AGG + chr1_1:22683271-22683290 Msa0014300:CDS 45.0%
ATGAAAGGGTGAGATGGTGA+AGG - chr1_1:22683307-22683326 None:intergenic 45.0%
ACCATCTCACCCTTTCATAC+AGG + chr1_1:22683309-22683328 Msa0014300:CDS 45.0%
ACCTGTATGAAAGGGTGAGA+TGG - chr1_1:22683313-22683332 None:intergenic 45.0%
TCTTGCTAACAAGTGCCCTT+AGG + chr1_1:22684072-22684091 Msa0014300:intron 45.0%
CTTGCTAACAAGTGCCCTTA+GGG + chr1_1:22684073-22684092 Msa0014300:intron 45.0%
!! TGCCCTAAGGGCATTGTTTA+AGG - chr1_1:22684208-22684227 None:intergenic 45.0%
CTTGCTAACAAGTGCCCTAA+GGG - chr1_1:22684220-22684239 None:intergenic 45.0%
TCTTGCTAACAAGTGCCCTA+AGG - chr1_1:22684221-22684240 None:intergenic 45.0%
GATCGAACTTCGCATCAGTA+GGG + chr1_1:22684402-22684421 Msa0014300:intron 45.0%
AGGACCACTTCCACATCTTA+AGG - chr1_1:22684565-22684584 None:intergenic 45.0%
! TTTTTGACCCATGCGTTGCA+CGG + chr1_1:22685002-22685021 Msa0014300:intron 45.0%
AAAGGCGATTCACTATGGGA+AGG + chr1_1:22685305-22685324 Msa0014300:intron 45.0%
AAGGCGATTCACTATGGGAA+GGG + chr1_1:22685306-22685325 Msa0014300:intron 45.0%
GATCCTATGCTTTGCTTGGT+TGG - chr1_1:22685966-22685985 None:intergenic 45.0%
!! TCTCTTCAGTTTTGTGCAGC+AGG - chr1_1:22686264-22686283 None:intergenic 45.0%
! GGCTTTTCTTACATGCACGA+TGG + chr1_1:22686537-22686556 Msa0014300:intron 45.0%
AATGAGGCAGTGCGAGTAAT+TGG - chr1_1:22686747-22686766 None:intergenic 45.0%
AAAGGTCAGCAAGCTAAGCT+CGG + chr1_1:22687275-22687294 Msa0014300:intron 45.0%
GTGTAACATGTGCATCTGTG+TGG + chr1_1:22687349-22687368 Msa0014300:intron 45.0%
AGCTTTCACTCAGCACACAA+TGG - chr1_1:22687383-22687402 None:intergenic 45.0%
TGTGCTGAGTGAAAGCTGTA+TGG + chr1_1:22687386-22687405 Msa0014300:intron 45.0%
ATTGGGAATTGGGATACCCA+TGG - chr1_1:22687416-22687435 None:intergenic 45.0%
ATATCAGTGCGAAGTTCCGT+TGG - chr1_1:22688068-22688087 None:intergenic 45.0%
TTGTGGGTAACTGTGGTTGT+TGG - chr1_1:22688326-22688345 None:intergenic 45.0%
!! GAAAGTGTTAGGGGCAAACT+TGG - chr1_1:22688361-22688380 None:intergenic 45.0%
AAGGAATGCTTGTGGAACCA+AGG + chr1_1:22688572-22688591 Msa0014300:intron 45.0%
TAGCATCATGGAGTTTGCCT+TGG - chr1_1:22688592-22688611 None:intergenic 45.0%
TGATTGTGCAGAGCTACATG+TGG - chr1_1:22688655-22688674 None:intergenic 45.0%
GGACATGGTGAAATGTAGTG+TGG - chr1_1:22688682-22688701 None:intergenic 45.0%
! TTGCTTTAGGTGGCAAGTTG+TGG + chr1_1:22689439-22689458 Msa0014300:intron 45.0%
! TGCTTTAGGTGGCAAGTTGT+GGG + chr1_1:22689440-22689459 Msa0014300:intron 45.0%
CAAGTTGTGGGAAATGGAGA+TGG + chr1_1:22689452-22689471 Msa0014300:CDS 45.0%
!!! CCATGTTTTGGCACAGGAAA+AGG - chr1_1:22689491-22689510 None:intergenic 45.0%
! CCTTTTCCTGTGCCAAAACA+TGG + chr1_1:22689488-22689507 Msa0014300:CDS 45.0%
!!! GGTAATCCATGTTTTGGCAC+AGG - chr1_1:22689497-22689516 None:intergenic 45.0%
CCATGCATAATGCAGCCAAT+GGG - chr1_1:22689689-22689708 None:intergenic 45.0%
!!! ATATATAAATCTTTTAAAAT+TGG + chr1_1:22680330-22680349 Msa0014300:intron 5.0%
!!! ATATTTTATTTATTTTACAA+GGG - chr1_1:22681997-22682016 None:intergenic 5.0%
!!! AATATTTTATTTATTTTACA+AGG - chr1_1:22681998-22682017 None:intergenic 5.0%
!!! TTTATTTTTTTTAAAATATG+TGG - chr1_1:22686096-22686115 None:intergenic 5.0%
!!! TATTATTTTTTTTTTTTTGA+AGG - chr1_1:22688487-22688506 None:intergenic 5.0%
!! AAAAAAAAAAAATAATAGAA+TGG + chr1_1:22688490-22688509 Msa0014300:intron 5.0%
!!! TTAAAATATTCTTTTAAATT+TGG - chr1_1:22688877-22688896 None:intergenic 5.0%
CATAGGTGGCAAAAGGGAGT+TGG - chr1_1:22678903-22678922 None:intergenic 50.0%
!! TTAAGGGGTGTCGGTGTGTA+AGG - chr1_1:22678978-22678997 None:intergenic 50.0%
GAGGGAAAGGGAACGAGAAT+TGG - chr1_1:22679071-22679090 None:intergenic 50.0%
AAGGCCAACCCATTGAACCA+GGG - chr1_1:22679295-22679314 None:intergenic 50.0%
TAAGGCCAACCCATTGAACC+AGG - chr1_1:22679296-22679315 None:intergenic 50.0%
GTGGCTGCAAATTCAGCCTT+TGG + chr1_1:22680103-22680122 Msa0014300:CDS 50.0%
! TGAATTGGTCTAACCGCGGT+TGG - chr1_1:22680471-22680490 None:intergenic 50.0%
GAGAGCAGGAATTATGGTGG+TGG + chr1_1:22680737-22680756 Msa0014300:CDS 50.0%
AAGTCGTGGACTTTCATGGG+AGG + chr1_1:22681480-22681499 Msa0014300:CDS 50.0%
GACTTTCATGGGAGGATACC+AGG + chr1_1:22681488-22681507 Msa0014300:CDS 50.0%
GGGTCAAACTTGTGTGGTTG+AGG - chr1_1:22682699-22682718 None:intergenic 50.0%
AATGGAGTCCACTCTTGTCC+TGG + chr1_1:22683248-22683267 Msa0014300:CDS 50.0%
AGCTTAGCAAGCTCACTACC+AGG - chr1_1:22683269-22683288 None:intergenic 50.0%
AAAGGGTGAGATGGTGAAGG+AGG - chr1_1:22683304-22683323 None:intergenic 50.0%
CGATCGAACTTCGCATCAGT+AGG + chr1_1:22684401-22684420 Msa0014300:intron 50.0%
! TTTTGACCCATGCGTTGCAC+GGG + chr1_1:22685003-22685022 Msa0014300:intron 50.0%
CACCCAACCAAGCAAAGCAT+AGG + chr1_1:22685960-22685979 Msa0014300:intron 50.0%
! GTGCCGGAGAGACTAAGTTT+TGG - chr1_1:22689057-22689076 None:intergenic 50.0%
AGGTGGCAAGTTGTGGGAAA+TGG + chr1_1:22689446-22689465 Msa0014300:intron 50.0%
! CCCATTGGCTGCATTATGCA+TGG + chr1_1:22689686-22689705 Msa0014300:three_prime_UTR 50.0%
GCCATGCATAATGCAGCCAA+TGG - chr1_1:22689690-22689709 None:intergenic 50.0%
TACCCCCTGGTTCAATGGGT+TGG + chr1_1:22679288-22679307 Msa0014300:CDS 55.0%
AGGCCAACCCATTGAACCAG+GGG - chr1_1:22679294-22679313 None:intergenic 55.0%
GCAGATGCCCTTCACAAGCA+GGG + chr1_1:22681510-22681529 Msa0014300:CDS 55.0%
GCTCACTACCAGGACAAGAG+TGG - chr1_1:22683259-22683278 None:intergenic 55.0%
CCAAGTGACAGATCCCCACT+AGG - chr1_1:22684474-22684493 None:intergenic 55.0%
CCTAGTGGGGATCTGTCACT+TGG + chr1_1:22684471-22684490 Msa0014300:intron 55.0%
ATAGGACCCGTGCAACGCAT+GGG - chr1_1:22685012-22685031 None:intergenic 55.0%
! ATCTGGAGCAGAAGAGGCAG+TGG - chr1_1:22687085-22687104 None:intergenic 55.0%
GAGAGGGTCCTACTAGTGTG+AGG - chr1_1:22688177-22688196 None:intergenic 55.0%
!! TCTCCGGCACAAGAAGTGTC+CGG + chr1_1:22689067-22689086 Msa0014300:intron 55.0%
TCTCCGGACACTTCTTGTGC+CGG - chr1_1:22689073-22689092 None:intergenic 55.0%
GGCCAACCCATTGAACCAGG+GGG - chr1_1:22679293-22679312 None:intergenic 60.0%
AGCACTGCTCTAGCTGCCTC+AGG - chr1_1:22679722-22679741 None:intergenic 60.0%
!! GCTTGTGAAGGGCATCTGCC+TGG - chr1_1:22681509-22681528 None:intergenic 60.0%
GGCAGATGCCCTTCACAAGC+AGG + chr1_1:22681509-22681528 Msa0014300:CDS 60.0%
GATAGGACCCGTGCAACGCA+TGG - chr1_1:22685013-22685032 None:intergenic 60.0%
AGCAGAAGAGGCAGTGGCCC+GGG - chr1_1:22687079-22687098 None:intergenic 65.0%
GAGCAGAAGAGGCAGTGGCC+CGG - chr1_1:22687080-22687099 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 22678870 22689811 22678870 ID=Msa0014300;Name=Msa0014300
chr1_1 mRNA 22678870 22689811 22678870 ID=Msa0014300-mRNA-1;Parent=Msa0014300;Name=Msa0014300-mRNA-1;_AED=0.15;_eAED=0.15;_QI=288|1|1|1|1|1|8|267|478
chr1_1 exon 22678870 22679381 22678870 ID=Msa0014300-mRNA-1:exon:7966;Parent=Msa0014300-mRNA-1
chr1_1 exon 22679661 22679979 22679661 ID=Msa0014300-mRNA-1:exon:7967;Parent=Msa0014300-mRNA-1
chr1_1 exon 22680091 22680240 22680091 ID=Msa0014300-mRNA-1:exon:7968;Parent=Msa0014300-mRNA-1
chr1_1 exon 22680686 22680937 22680686 ID=Msa0014300-mRNA-1:exon:7969;Parent=Msa0014300-mRNA-1
chr1_1 exon 22681442 22681531 22681442 ID=Msa0014300-mRNA-1:exon:7970;Parent=Msa0014300-mRNA-1
chr1_1 exon 22682546 22682731 22682546 ID=Msa0014300-mRNA-1:exon:7971;Parent=Msa0014300-mRNA-1
chr1_1 exon 22683212 22683330 22683212 ID=Msa0014300-mRNA-1:exon:7972;Parent=Msa0014300-mRNA-1
chr1_1 exon 22689448 22689811 22689448 ID=Msa0014300-mRNA-1:exon:7973;Parent=Msa0014300-mRNA-1
chr1_1 five_prime_UTR 22678870 22679157 22678870 ID=Msa0014300-mRNA-1:five_prime_utr;Parent=Msa0014300-mRNA-1
chr1_1 CDS 22679158 22679381 22679158 ID=Msa0014300-mRNA-1:cds;Parent=Msa0014300-mRNA-1
chr1_1 CDS 22679661 22679979 22679661 ID=Msa0014300-mRNA-1:cds;Parent=Msa0014300-mRNA-1
chr1_1 CDS 22680091 22680240 22680091 ID=Msa0014300-mRNA-1:cds;Parent=Msa0014300-mRNA-1
chr1_1 CDS 22680686 22680937 22680686 ID=Msa0014300-mRNA-1:cds;Parent=Msa0014300-mRNA-1
chr1_1 CDS 22681442 22681531 22681442 ID=Msa0014300-mRNA-1:cds;Parent=Msa0014300-mRNA-1
chr1_1 CDS 22682546 22682731 22682546 ID=Msa0014300-mRNA-1:cds;Parent=Msa0014300-mRNA-1
chr1_1 CDS 22683212 22683330 22683212 ID=Msa0014300-mRNA-1:cds;Parent=Msa0014300-mRNA-1
chr1_1 CDS 22689448 22689544 22689448 ID=Msa0014300-mRNA-1:cds;Parent=Msa0014300-mRNA-1
chr1_1 three_prime_UTR 22689545 22689811 22689545 ID=Msa0014300-mRNA-1:three_prime_utr;Parent=Msa0014300-mRNA-1
Gene Sequence

>Msa0014300

ATGCAACTCTTCACATCACTTACCAATTCTTGTTTAGATTTTTCTCTCCCTTTCATTATATTGCTCCTCTTTTTTATTCTCCTTCCTTTCCTTCAATGGTGGAAACACCATAGAGACAAAGACAAACTTTTACCCCCTGGTTCAATGGGTTGGCCTTACTTTGGAGAGACCCTCAAACTCTACACTCAAAATCCAAATTCCTTCTTCTCCACAAGGCAGAAAAGGTATGGAGATATATTCAAGACACACATACTAGGTTGTCCTTGTGTGATGATATCAAGTCCTGAGGCAGCTAGAGCAGTGCTTGTGACTCAAGCACATCTTTTTAAACCAACATACCCTCCAAGCAAAGAGAAGATGATAGGACCAGAAGCTTTGTTCTTTCAACAAGGTGCTTATCACTCCATGCTCAAGAAGCTAGTTCAAGCCTCTTTTTTACCTTCCACACTTAAAAATTCTGTCTCTTATGTGGACCAAATTGTACAAAAATTGGTTCCAACTTGGGCTAATAGAACCATCAACTCCTTGCAAGAGATGAAAAAGTATGCTTTTGAAGTGGCTGCAAATTCAGCCTTTGGTGAAATAAATGAGATGGAAATGAAAGAAATAAGAGAATTGTATCATTGCTTGGAGAAGGGCTACAATTCTTATCCTTTAAATCTCCATGGAACTTCATATTGGAAGGCATTGAAGGCAAGGAAGGTTCTGAATGAGAGTATAAAGAGCATAATGGAAAGAAGAAAGGAGAGCAGGAATTATGGTGGTGGGTTGTTGGGAATTCTGTTGAGAGGCAAAGGTCATGAGAAGATGTACCAACTAACTGATTCTCAAGTGGCTGATAATATCATTGGTGTCATCTTTGCTGCACATGATACCACAGCTAGTGTTCTAACATGGGTTCTAAAGTACTTGCATGACAATGTCAATCTCTTGGAAAATGTCACAAAAGAACAAGAAGAAATAAAAAGCAAACTTGCTAAGGAAAGTCGTGGACTTTCATGGGAGGATACCAGGCAGATGCCCTTCACAAGCAGGGTCATCCAAGAGACGTTAAGAAGTGCAAGCATATTATCATTCACATTTAGAGAAGCAGTTAGAGATGTGGAACTACAAGGTTACTCCATTCCAAAAGGTTGGAAAGTCCTTCCACTCTTTAGAAGTATTCATCATTCACCTCATTTCTTCCCTCAACCACACAAGTTTGACCCTTCAAGATTTGAGAATCCACCTCGACCAAACACATATATGCCATTTGGAAATGGAGTCCACTCTTGTCCTGGTAGTGAGCTTGCTAAGCTTGAGGTTCTTGTCCTCCTTCACCATCTCACCCTTTCATACAGGTGGCAAGTTGTGGGAAATGGAGATGGAATTCAATATGGTCCTTTTCCTGTGCCAAAACATGGATTACCAGTAAAGATAACTCTAAAGAAGAGTTAG
Protein sequence

>Msa0014300

MQLFTSLTNSCLDFSLPFIILLLFFILLPFLQWWKHHRDKDKLLPPGSMGWPYFGETLKLYTQNPNSFFSTRQKRYGDIFKTHILGCPCVMISSPEAARAVLVTQAHLFKPTYPPSKEKMIGPEALFFQQGAYHSMLKKLVQASFLPSTLKNSVSYVDQIVQKLVPTWANRTINSLQEMKKYAFEVAANSAFGEINEMEMKEIRELYHCLEKGYNSYPLNLHGTSYWKALKARKVLNESIKSIMERRKESRNYGGGLLGILLRGKGHEKMYQLTDSQVADNIIGVIFAAHDTTASVLTWVLKYLHDNVNLLENVTKEQEEIKSKLAKESRGLSWEDTRQMPFTSRVIQETLRSASILSFTFREAVRDVELQGYSIPKGWKVLPLFRSIHHSPHFFPQPHKFDPSRFENPPRPNTYMPFGNGVHSCPGSELAKLEVLVLLHHLTLSYRWQVVGNGDGIQYGPFPVPKHGLPVKITLKKS*