AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0153990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0153990 MtrunA17_Chr1g0164371 96.234 478 18 0 1 478 1 478 0.0 961
Msa0153990 MtrunA17_Chr5g0408181 55.365 466 194 5 20 477 5 464 0.0 530
Msa0153990 MtrunA17_Chr8g0369791 57.110 436 179 3 44 477 37 466 0.0 520
Msa0153990 MtrunA17_Chr4g0044851 55.928 447 193 3 29 472 21 466 0.0 517
Msa0153990 MtrunA17_Chr4g0044841 56.027 448 192 4 29 472 22 468 9.32e-179 509
Msa0153990 MtrunA17_Chr1g0153371 52.553 470 209 6 12 472 1 465 1.96e-176 503
Msa0153990 MtrunA17_Chr7g0219961 32.976 467 294 9 18 474 4 461 3.46e-82 261
Msa0153990 MtrunA17_Chr3g0107511 32.347 473 304 6 15 473 4 474 1.92e-78 253
Msa0153990 MtrunA17_Chr6g0455461 31.183 465 306 9 18 474 4 462 8.72e-78 250
Msa0153990 MtrunA17_Chr5g0400421 32.385 457 293 10 32 473 32 487 1.09e-75 246
Msa0153990 MtrunA17_Chr3g0078411 30.538 465 309 9 18 474 4 462 1.29e-75 244
Msa0153990 MtrunA17_Chr5g0400411 34.598 448 277 9 40 473 41 486 1.97e-75 245
Msa0153990 MtrunA17_Chr7g0226771 32.500 480 292 14 20 477 7 476 2.38e-75 244
Msa0153990 MtrunA17_Chr2g0293421 30.803 461 301 8 21 465 19 477 4.24e-75 244
Msa0153990 MtrunA17_Chr3g0107501 32.667 450 287 7 38 473 27 474 5.76e-75 243
Msa0153990 MtrunA17_Chr3g0113321 30.112 445 288 9 44 473 29 465 1.52e-74 243
Msa0153990 MtrunA17_Chr5g0403931 31.315 479 305 9 13 473 5 477 2.89e-74 241
Msa0153990 MtrunA17_Chr8g0341951 31.894 417 265 7 44 448 37 446 1.26e-73 239
Msa0153990 MtrunA17_Chr2g0293411 30.642 483 304 10 20 478 14 489 2.81e-73 239
Msa0153990 MtrunA17_Chr3g0141801 30.867 473 300 9 21 473 16 481 4.53e-73 239
Msa0153990 MtrunA17_Chr8g0372411 30.455 440 293 7 45 474 40 476 2.44e-72 236
Msa0153990 MtrunA17_Chr8g0381571 33.030 439 261 10 34 447 30 460 1.11e-71 234
Msa0153990 MtrunA17_Chr8g0381541 32.662 447 269 10 30 452 27 465 1.48e-71 235
Msa0153990 MtrunA17_Chr8g0388921 31.277 470 303 10 20 473 9 474 3.98e-71 233
Msa0153990 MtrunA17_Chr5g0443401 30.977 481 305 13 10 476 10 477 1.29e-68 227
Msa0153990 MtrunA17_Chr3g0089361 29.684 475 303 12 21 474 11 475 1.67e-65 218
Msa0153990 MtrunA17_Chr5g0397971 29.806 463 310 9 26 476 11 470 2.48e-65 218
Msa0153990 MtrunA17_Chr6g0478161 29.498 478 309 10 16 474 20 488 9.61e-65 217
Msa0153990 MtrunA17_Chr8g0372711 29.149 470 316 8 19 476 19 483 2.96e-64 216
Msa0153990 MtrunA17_Chr5g0443731 30.000 450 297 9 42 477 27 472 3.08e-63 212
Msa0153990 MtrunA17_Chr8g0380471 29.122 467 313 10 20 473 12 473 6.21e-62 209
Msa0153990 MtrunA17_Chr8g0339861 29.890 455 292 12 38 474 39 484 2.07e-59 202
Msa0153990 MtrunA17_Chr8g0373441 30.993 413 255 10 10 407 7 404 5.59e-56 192
Msa0153990 MtrunA17_Chr8g0380931 27.027 444 311 9 42 473 60 502 3.64e-55 192
Msa0153990 MtrunA17_Chr3g0089351 28.040 403 273 7 79 474 1 393 3.20e-54 186
Msa0153990 MtrunA17_Chr5g0404861 40.764 157 88 2 320 473 2 156 5.08e-35 128
Msa0153990 MtrunA17_Chr6g0463551 34.066 182 109 3 199 372 11 189 5.92e-30 115
Msa0153990 MtrunA17_Chr8g0381551 28.431 306 188 9 30 312 27 324 1.62e-29 118
Msa0153990 MtrunA17_Chr1g0174481 26.535 456 287 17 38 454 28 474 1.37e-28 118
Msa0153990 MtrunA17_Chr8g0381561 45.455 110 59 1 339 447 2 111 2.83e-27 105
Msa0153990 MtrunA17_Chr8g0382901 23.982 442 297 14 33 450 17 443 6.07e-27 114
Msa0153990 MtrunA17_Chr8g0382901 22.757 457 308 14 28 450 477 922 1.33e-21 98.6
Msa0153990 MtrunA17_Chr1g0174451 25.277 451 289 11 45 454 37 480 2.84e-26 111
Msa0153990 MtrunA17_Chr1g0174441 25.486 463 290 16 38 454 48 501 3.76e-26 111
Msa0153990 MtrunA17_Chr4g0000151 39.062 128 76 2 339 465 5 131 5.07e-26 103
Msa0153990 MtrunA17_Chr6g0458561 25.358 489 300 19 14 450 22 497 1.76e-25 109
Msa0153990 MtrunA17_Chr1g0161671 26.298 289 197 7 38 312 23 309 3.64e-25 105
Msa0153990 MtrunA17_Chr3g0116741 24.897 486 310 16 13 458 21 491 5.61e-25 107
Msa0153990 MtrunA17_Chr8g0361471 26.160 474 297 16 21 450 5 469 7.14e-25 107
Msa0153990 MtrunA17_Chr7g0235261 25.310 403 266 11 73 447 85 480 8.13e-25 107
Msa0153990 MtrunA17_Chr5g0436981 32.927 164 103 4 37 195 22 183 1.01e-24 101
Msa0153990 MtrunA17_Chr8g0339331 24.729 461 276 16 45 450 40 484 1.10e-24 107
Msa0153990 MtrunA17_Chr2g0310391 23.830 470 302 19 18 444 3 459 1.35e-24 106
Msa0153990 MtrunA17_Chr2g0310381 24.078 461 304 18 18 440 3 455 1.85e-24 106
Msa0153990 MtrunA17_Chr8g0362731 25.654 382 234 14 104 450 15 381 2.25e-24 104
Msa0153990 MtrunA17_Chr5g0404881 29.744 195 130 4 44 232 36 229 3.05e-24 100
Msa0153990 MtrunA17_Chr3g0101671 23.760 484 318 15 7 450 1 473 3.19e-24 105
Msa0153990 MtrunA17_Chr5g0405001 22.718 471 321 9 17 450 17 481 3.50e-24 105
Msa0153990 MtrunA17_Chr5g0403321 24.330 448 297 14 41 450 31 474 3.62e-24 105
Msa0153990 MtrunA17_Chr6g0463541 42.453 106 61 0 368 473 2 107 5.95e-24 96.3
Msa0153990 MtrunA17_Chr4g0000161 26.408 284 190 8 38 307 37 315 6.04e-24 102
Msa0153990 MtrunA17_Chr7g0258221 23.156 488 324 16 12 457 2 480 6.94e-24 104
Msa0153990 MtrunA17_Chr1g0200961 25.373 469 303 17 20 450 6 465 9.38e-24 103
Msa0153990 MtrunA17_Chr4g0000171 26.316 285 189 10 38 307 37 315 1.16e-23 101
Msa0153990 MtrunA17_Chr5g0437001 43.519 108 57 1 340 443 1 108 1.52e-23 97.1
Msa0153990 MtrunA17_Chr6g0465511 25.527 474 300 17 21 450 5 469 1.71e-23 103
Msa0153990 MtrunA17_Chr5g0403351 23.382 479 310 17 14 450 8 471 2.21e-23 102
Msa0153990 MtrunA17_Chr3g0084921 24.950 497 310 16 12 457 2 486 4.06e-23 102
Msa0153990 MtrunA17_Chr6g0466331 25.053 475 301 18 21 450 5 469 5.06e-23 102
Msa0153990 MtrunA17_Chr4g0035921 22.016 486 323 12 12 450 5 481 5.92e-23 101
Msa0153990 MtrunA17_Chr3g0101611 24.832 447 290 18 44 453 38 475 6.56e-23 101
Msa0153990 MtrunA17_Chr3g0116681 24.681 470 307 15 17 450 13 471 9.56e-23 101
Msa0153990 MtrunA17_Chr4g0058231 24.380 484 303 18 18 452 2 471 1.10e-22 100
Msa0153990 MtrunA17_Chr4g0004601 24.533 428 259 17 90 474 123 529 1.19e-22 100
Msa0153990 MtrunA17_Chr1g0160851 24.641 487 296 15 14 452 4 467 1.35e-22 100
Msa0153990 MtrunA17_Chr7g0235551 25.383 457 285 15 44 454 33 479 1.62e-22 100
Msa0153990 MtrunA17_Chr1g0174471 24.115 452 292 13 46 454 52 495 2.29e-22 100
Msa0153990 MtrunA17_Chr8g0334891 23.947 451 289 15 42 463 36 461 2.45e-22 99.8
Msa0153990 MtrunA17_Chr1g0162801 24.435 487 304 20 12 450 1 471 4.46e-22 99.0
Msa0153990 MtrunA17_Chr5g0445381 22.532 466 327 16 14 450 39 499 4.90e-22 99.0
Msa0153990 MtrunA17_Chr1g0162811 22.965 479 318 14 12 450 1 468 5.20e-22 99.0
Msa0153990 MtrunA17_Chr6g0463801 25.571 438 282 13 44 448 37 463 5.91e-22 98.6
Msa0153990 MtrunA17_Chr6g0466901 24.788 472 298 18 12 431 1 467 1.01e-21 98.2
Msa0153990 MtrunA17_Chr5g0431511 24.051 474 308 17 44 478 33 493 1.86e-21 97.1
Msa0153990 MtrunA17_Chr4g0076161 22.661 481 320 15 12 450 1 471 1.99e-21 97.1
Msa0153990 MtrunA17_Chr3g0128461 23.210 405 268 11 68 439 92 486 3.53e-21 96.3
Msa0153990 MtrunA17_Chr7g0218601 23.702 443 293 13 44 450 34 467 3.62e-21 96.3
Msa0153990 MtrunA17_Chr8g0346261 23.947 451 292 15 46 458 86 523 5.49e-21 95.9
Msa0153990 MtrunA17_Chr4g0058201 24.017 458 308 15 34 458 18 468 5.53e-21 95.5
Msa0153990 MtrunA17_Chr4g0011961 24.576 472 309 18 16 450 2 463 1.39e-20 94.4
Msa0153990 MtrunA17_Chr4g0013471 24.342 304 199 9 38 321 37 329 1.39e-20 93.6
Msa0153990 MtrunA17_Chr5g0445461 23.679 473 317 17 10 450 8 468 1.57e-20 94.4
Msa0153990 MtrunA17_Chr7g0218611 23.831 449 299 12 38 450 27 468 1.57e-20 94.4
Msa0153990 MtrunA17_Chr5g0431501 24.270 445 292 14 44 450 33 470 2.46e-20 93.6
Msa0153990 MtrunA17_Chr5g0431461 24.270 445 292 14 44 450 33 470 2.46e-20 93.6
Msa0153990 MtrunA17_Chr8g0357421 22.573 443 297 11 44 450 37 469 3.02e-20 93.6
Msa0153990 MtrunA17_Chr1g0154731 24.113 423 282 15 76 471 88 498 3.87e-20 93.2
Msa0153990 MtrunA17_Chr5g0446151 23.007 439 296 13 44 450 41 469 4.68e-20 92.8
Msa0153990 MtrunA17_Chr4g0011901 23.371 445 292 13 45 450 30 464 4.82e-20 92.8
Msa0153990 MtrunA17_Chr8g0362701 25.057 435 281 13 60 454 50 479 6.19e-20 92.4
Msa0153990 MtrunA17_Chr4g0074581 23.552 518 304 18 3 453 24 516 6.25e-20 92.8
Msa0153990 MtrunA17_Chr4g0046331 23.585 424 269 14 74 452 65 478 7.79e-20 92.4
Msa0153990 MtrunA17_Chr4g0046351 22.917 432 280 14 74 462 65 486 1.06e-19 92.0
Msa0153990 MtrunA17_Chr4g0046321 23.877 423 267 15 74 452 65 476 1.07e-19 92.0
Msa0153990 MtrunA17_Chr3g0101721 22.345 452 293 15 44 452 37 473 1.13e-19 91.7
Msa0153990 MtrunA17_Chr3g0101571 22.902 441 297 16 44 450 36 467 1.16e-19 91.7
Msa0153990 MtrunA17_Chr4g0011981 24.070 457 297 16 33 450 19 464 1.27e-19 91.7
Msa0153990 MtrunA17_Chr5g0401681 22.574 474 309 15 19 452 8 463 1.59e-19 91.3
Msa0153990 MtrunA17_Chr0c19g0493771 31.183 186 116 4 272 450 440 620 1.59e-19 91.7
Msa0153990 MtrunA17_Chr3g0101661 23.198 444 299 14 44 452 38 474 1.74e-19 91.3
Msa0153990 MtrunA17_Chr1g0213671 27.455 448 274 19 44 448 34 473 1.83e-19 91.3
Msa0153990 MtrunA17_Chr1g0205371 24.736 473 308 16 18 453 8 469 1.83e-19 90.9
Msa0153990 MtrunA17_Chr5g0445451 23.305 472 320 18 10 450 8 468 1.91e-19 90.9
Msa0153990 MtrunA17_Chr1g0203141 24.318 440 286 17 68 473 86 512 1.94e-19 90.9
Msa0153990 MtrunA17_Chr1g0174461 22.107 484 315 11 19 454 10 479 2.10e-19 90.9
Msa0153990 MtrunA17_Chr5g0395321 21.888 466 323 12 12 450 14 465 2.17e-19 90.9
Msa0153990 MtrunA17_Chr8g0356001 23.207 474 319 12 15 450 8 474 2.42e-19 90.9
Msa0153990 MtrunA17_Chr3g0101731 22.500 440 302 11 44 450 36 469 2.42e-19 90.9
Msa0153990 MtrunA17_Chr4g0057001 23.146 445 294 15 44 450 50 484 3.05e-19 90.5
Msa0153990 MtrunA17_Chr4g0047661 23.909 481 318 15 16 458 20 490 3.13e-19 90.5
Msa0153990 MtrunA17_Chr4g0058191 22.680 485 311 15 18 458 2 466 3.16e-19 90.1
Msa0153990 MtrunA17_Chr4g0047641 23.679 473 312 15 22 450 17 484 3.35e-19 90.5
Msa0153990 MtrunA17_Chr3g0101631 22.532 466 315 13 19 450 11 464 3.48e-19 90.1
Msa0153990 MtrunA17_Chr1g0160861 26.910 301 186 10 172 452 22 308 4.40e-19 88.2
Msa0153990 MtrunA17_Chr5g0445421 21.475 461 321 14 10 450 82 521 5.38e-19 89.7
Msa0153990 MtrunA17_Chr4g0063221 22.561 492 307 16 12 443 12 489 5.63e-19 89.7
Msa0153990 MtrunA17_Chr7g0215181 25.067 375 231 15 133 476 152 507 7.38e-19 89.4
Msa0153990 MtrunA17_Chr8g0372251 22.803 421 281 12 45 427 36 450 7.70e-19 89.4
Msa0153990 MtrunA17_Chr8g0362481 23.798 416 254 12 88 454 9 410 9.02e-19 88.6
Msa0153990 MtrunA17_Chr2g0286091 22.698 467 320 15 39 471 36 495 9.38e-19 89.0
Msa0153990 MtrunA17_Chr6g0457421 25.240 416 257 14 101 476 104 505 9.61e-19 89.0
Msa0153990 MtrunA17_Chr3g0101821 21.263 475 321 12 16 450 8 469 1.05e-18 88.6
Msa0153990 MtrunA17_Chr3g0101621 23.690 439 295 15 44 452 33 461 1.09e-18 88.6
Msa0153990 MtrunA17_Chr3g0101601 23.226 465 314 15 19 450 11 465 1.54e-18 88.2
Msa0153990 MtrunA17_Chr5g0395381 20.870 460 326 11 4 450 6 440 1.89e-18 87.8
Msa0153990 MtrunA17_Chr5g0445441 22.930 471 323 17 10 450 49 509 1.93e-18 88.2
Msa0153990 MtrunA17_Chr5g0446161 21.757 478 330 13 7 450 1 468 2.07e-18 87.8
Msa0153990 MtrunA17_Chr4g0058281 22.840 486 323 17 14 458 15 489 2.21e-18 87.8
Msa0153990 MtrunA17_Chr1g0193811 23.185 427 270 14 88 473 104 513 2.73e-18 87.4
Msa0153990 MtrunA17_Chr1g0161641 47.368 76 39 1 373 447 13 88 3.26e-18 79.3
Msa0153990 MtrunA17_Chr3g0101581 22.961 466 317 17 19 450 13 470 4.20e-18 87.0
Msa0153990 MtrunA17_Chr5g0406651 21.616 458 321 12 27 450 12 465 7.00e-18 86.3
Msa0153990 MtrunA17_Chr6g0451681 22.785 474 285 18 3 446 16 438 7.08e-18 86.3
Msa0153990 MtrunA17_Chr8g0334941 25.000 288 182 7 194 463 35 306 1.23e-17 84.0
Msa0153990 MtrunA17_Chr3g0101691 22.687 454 296 19 39 450 33 473 1.56e-17 85.1
Msa0153990 MtrunA17_Chr5g0413911 24.301 465 297 18 44 455 42 504 1.99e-17 84.7
Msa0153990 MtrunA17_Chr4g0030701 22.294 462 292 14 45 453 36 483 2.24e-17 84.7
Msa0153990 MtrunA17_Chr4g0011921 24.160 476 309 15 14 450 2 464 2.83e-17 84.3
Msa0153990 MtrunA17_Chr1g0179811 24.099 444 278 15 76 474 108 537 3.21e-17 84.3
Msa0153990 MtrunA17_Chr5g0403331 22.869 481 320 17 12 450 1 472 3.33e-17 84.0
Msa0153990 MtrunA17_Chr3g0101651 21.308 474 324 15 18 452 12 475 3.61e-17 84.0
Msa0153990 MtrunA17_Chr1g0205361 24.439 446 288 16 44 452 34 467 4.62e-17 83.6
Msa0153990 MtrunA17_Chr3g0101801 21.967 478 325 13 14 450 6 476 4.74e-17 83.6
Msa0153990 MtrunA17_Chr8g0377341 22.428 486 319 18 3 448 28 495 9.45e-17 82.8
Msa0153990 MtrunA17_Chr2g0280261 23.198 444 302 12 44 460 34 465 1.81e-16 81.6
Msa0153990 MtrunA17_Chr6g0463561 26.404 178 124 3 6 178 2 177 2.37e-16 77.4
Msa0153990 MtrunA17_Chr1g0164211 23.974 463 269 16 44 452 31 464 2.77e-16 81.3
Msa0153990 MtrunA17_Chr4g0011881 23.210 461 310 15 25 450 13 464 2.95e-16 81.3
Msa0153990 MtrunA17_Chr2g0296661 23.571 420 272 12 69 449 56 465 3.56e-16 80.9
Msa0153990 MtrunA17_Chr4g0058211 28.804 184 121 4 281 458 15 194 4.18e-16 77.4
Msa0153990 MtrunA17_Chr7g0258211 19.444 432 299 9 69 458 63 487 4.26e-16 80.9
Msa0153990 MtrunA17_Chr8g0351801 23.659 317 181 11 174 456 203 492 4.31e-16 80.9
Msa0153990 MtrunA17_Chr4g0030711 22.611 429 281 13 69 451 61 484 5.18e-16 80.5
Msa0153990 MtrunA17_Chr8g0364651 22.526 475 308 13 21 449 7 467 5.36e-16 80.5
Msa0153990 MtrunA17_Chr6g0479681 22.737 453 293 16 68 473 84 526 5.82e-16 80.5
Msa0153990 MtrunA17_Chr5g0395331 21.542 441 307 10 44 450 37 472 6.27e-16 80.1
Msa0153990 MtrunA17_Chr8g0370641 22.874 494 315 14 18 458 17 497 7.41e-16 80.1
Msa0153990 MtrunA17_Chr5g0396521 26.642 274 143 11 234 458 286 550 7.68e-16 80.1
Msa0153990 MtrunA17_Chr4g0024771 21.748 469 331 16 10 450 8 468 8.91e-16 79.7
Msa0153990 MtrunA17_Chr6g0451741 23.158 475 282 17 20 427 34 492 1.21e-15 79.3
Msa0153990 MtrunA17_Chr6g0472221 23.133 415 277 16 68 450 95 499 1.27e-15 79.3
Msa0153990 MtrunA17_Chr5g0401691 22.851 477 321 15 10 452 17 480 1.36e-15 79.3
Msa0153990 MtrunA17_Chr6g0484841 21.239 452 309 15 35 450 32 472 1.58e-15 79.0
Msa0153990 MtrunA17_Chr2g0314731 21.774 496 339 15 14 474 3 484 2.04e-15 78.6
Msa0153990 MtrunA17_Chr3g0101831 21.542 441 305 16 44 450 37 470 2.19e-15 78.6
Msa0153990 MtrunA17_Chr5g0430081 21.294 479 331 16 14 453 2 473 2.42e-15 78.2
Msa0153990 MtrunA17_Chr1g0200951 22.661 481 293 20 28 448 36 497 2.50e-15 78.6
Msa0153990 MtrunA17_Chr1g0174431 28.889 180 112 4 288 455 4 179 2.75e-15 74.7
Msa0153990 MtrunA17_Chr4g0056951 22.565 421 282 14 67 450 66 479 3.77e-15 77.8
Msa0153990 MtrunA17_Chr5g0400391 43.373 83 46 1 391 472 2 84 4.83e-15 71.2
Msa0153990 MtrunA17_Chr1g0176831 22.177 496 337 16 14 474 33 514 6.48e-15 77.0
Msa0153990 MtrunA17_Chr3g0089381 25.654 191 125 5 200 382 21 202 1.10e-14 73.2
Msa0153990 MtrunA17_Chr5g0419691 23.465 456 298 17 35 450 20 464 1.30e-14 75.9
Msa0153990 MtrunA17_Chr6g0463791 21.842 467 325 14 18 450 7 467 1.53e-14 75.9
Msa0153990 MtrunA17_Chr7g0246181 23.043 447 283 14 55 457 45 474 1.54e-14 75.9
Msa0153990 MtrunA17_Chr4g0053621 22.687 454 295 17 40 451 27 466 1.87e-14 75.5
Msa0153990 MtrunA17_Chr4g0052851 22.348 443 305 14 37 453 26 455 4.03e-14 74.3
Msa0153990 MtrunA17_Chr4g0061381 28.455 246 156 9 219 450 232 471 4.19e-14 74.3
Msa0153990 MtrunA17_Chr3g0082701 22.065 494 315 18 15 445 7 493 4.44e-14 74.3
Msa0153990 MtrunA17_Chr1g0161651 24.919 309 171 9 19 268 12 318 5.42e-14 73.2
Msa0153990 MtrunA17_Chr2g0296651 23.347 484 307 17 12 454 5 465 5.64e-14 73.9
Msa0153990 MtrunA17_Chr3g0135841 24.809 262 176 7 223 469 274 529 5.74e-14 74.3
Msa0153990 MtrunA17_Chr1g0207841 22.099 362 239 10 127 453 132 485 6.06e-14 73.9
Msa0153990 MtrunA17_Chr4g0046631 20.935 492 327 15 1 440 1 482 7.73e-14 73.6
Msa0153990 MtrunA17_Chr3g0101741 22.444 401 264 13 90 458 11 396 7.83e-14 73.2
Msa0153990 MtrunA17_Chr4g0046681 27.647 170 105 6 284 440 30 194 9.52e-14 70.9
Msa0153990 MtrunA17_Chr4g0011851 28.421 190 120 6 270 450 1 183 1.10e-13 70.1
Msa0153990 MtrunA17_Chr5g0446101 25.114 219 151 5 240 450 68 281 1.12e-13 72.0
Msa0153990 MtrunA17_Chr4g0052881 25.592 211 151 4 240 449 256 461 1.19e-13 73.2
Msa0153990 MtrunA17_Chr2g0313771 21.635 416 275 12 90 468 114 515 1.57e-13 72.8
Msa0153990 MtrunA17_Chr7g0248991 30.769 143 93 3 272 413 222 359 2.94e-13 71.2
Msa0153990 MtrunA17_Chr8g0364631 22.292 480 321 17 44 476 32 506 3.28e-13 71.6
Msa0153990 MtrunA17_Chr5g0445531 21.364 440 303 15 44 450 38 467 3.70e-13 71.6
Msa0153990 MtrunA17_Chr5g0430131 21.856 485 325 19 12 453 1 474 3.74e-13 71.6
Msa0153990 MtrunA17_Chr4g0017411 22.976 457 306 16 24 453 15 452 3.81e-13 71.6
Msa0153990 MtrunA17_Chr3g0089291 24.893 233 160 6 79 304 1 225 4.18e-13 68.9
Msa0153990 MtrunA17_Chr8g0387101 23.419 427 284 12 68 454 58 481 6.09e-13 70.9
Msa0153990 MtrunA17_Chr4g0039391 26.486 185 127 4 274 453 293 473 6.23e-13 70.9
Msa0153990 MtrunA17_Chr2g0280081 20.698 430 291 11 68 454 557 979 1.64e-12 70.1
Msa0153990 MtrunA17_Chr2g0313791 22.164 379 254 10 87 435 102 469 3.10e-12 68.6
Msa0153990 MtrunA17_Chr2g0280011 28.492 179 113 4 288 454 11 186 4.54e-12 65.5
Msa0153990 MtrunA17_Chr2g0280121 22.633 433 281 14 68 454 60 484 4.75e-12 68.2
Msa0153990 MtrunA17_Chr1g0161661 42.623 61 34 1 392 451 15 75 6.55e-12 62.0
Msa0153990 MtrunA17_Chr4g0052861 23.757 181 133 3 274 453 288 464 3.81e-11 65.1
Msa0153990 MtrunA17_Chr8g0354571 22.139 402 264 15 88 453 112 500 5.29e-11 64.7
Msa0153990 MtrunA17_Chr8g0354531 23.096 407 253 14 88 453 234 621 5.68e-11 65.1
Msa0153990 MtrunA17_Chr8g0373431 45.902 61 32 1 413 473 4 63 6.38e-11 58.2
Msa0153990 MtrunA17_Chr2g0313831 21.228 391 266 9 88 443 103 486 7.25e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0153990 AT2G29090.2 66.816 446 145 3 31 474 36 480 0.0 612
Msa0153990 AT2G29090.1 66.816 446 145 3 31 474 36 480 0.0 612
Msa0153990 AT5G45340.1 55.983 468 197 3 12 476 1 462 0.0 551
Msa0153990 AT4G19230.1 55.983 468 197 3 12 476 1 462 0.0 549
Msa0153990 AT3G19270.2 56.893 457 192 3 16 471 9 461 0.0 534
Msa0153990 AT4G19230.2 54.526 464 201 4 12 471 1 458 0.0 516
Msa0153990 AT2G29090.3 66.062 386 128 3 91 474 1 385 0.0 514
Msa0153990 AT5G45340.2 55.257 447 191 3 12 455 1 441 0.0 514
Msa0153990 AT3G19270.1 56.682 434 183 3 16 448 9 438 3.26e-176 502
Msa0153990 AT2G29090.4 62.718 287 104 3 31 315 36 321 6.39e-119 352
Msa0153990 AT2G32440.2 32.845 478 299 11 16 474 11 485 2.64e-76 248
Msa0153990 AT2G32440.1 32.845 478 299 11 16 474 11 485 2.64e-76 248
Msa0153990 AT1G05160.2 32.287 446 285 8 44 474 45 488 5.46e-76 246
Msa0153990 AT1G05160.1 32.287 446 285 8 44 474 45 488 5.46e-76 246
Msa0153990 AT1G19630.1 32.278 474 304 9 14 474 4 473 2.69e-75 244
Msa0153990 AT5G05690.1 32.947 431 268 8 44 461 31 453 2.72e-75 244
Msa0153990 AT5G38970.1 29.630 459 314 7 20 474 10 463 5.48e-75 243
Msa0153990 AT3G13730.1 31.982 444 280 8 45 473 52 488 7.58e-73 238
Msa0153990 AT3G30180.1 30.377 451 306 7 20 466 10 456 4.64e-72 236
Msa0153990 AT3G13730.2 32.057 418 264 7 45 447 52 464 1.29e-70 232
Msa0153990 AT1G19630.3 32.438 447 286 8 14 448 4 446 1.31e-70 231
Msa0153990 AT5G36110.1 31.320 447 283 10 44 473 34 473 2.18e-70 231
Msa0153990 AT2G42850.1 31.440 493 298 13 13 478 6 485 8.07e-69 228
Msa0153990 AT4G36380.1 30.562 445 292 8 44 474 69 510 8.21e-68 226
Msa0153990 AT3G50660.1 30.208 480 278 11 44 474 39 510 4.17e-65 219
Msa0153990 AT5G05690.2 32.888 374 235 6 44 408 31 397 6.32e-65 215
Msa0153990 AT1G12740.1 28.634 454 308 7 20 459 8 459 1.90e-64 216
Msa0153990 AT5G38970.3 29.517 393 271 5 20 410 10 398 3.76e-63 211
Msa0153990 AT1G12740.2 28.478 460 307 8 20 459 8 465 1.88e-62 211
Msa0153990 AT1G12740.4 28.261 460 308 8 20 459 8 465 6.92e-62 209
Msa0153990 AT1G73340.1 28.482 481 307 9 16 478 21 482 1.31e-61 209
Msa0153990 AT1G19630.2 32.117 411 262 9 14 411 4 410 7.44e-59 200
Msa0153990 AT5G48000.2 28.665 457 306 10 34 474 22 474 9.78e-57 196
Msa0153990 AT5G48000.4 28.665 457 306 10 34 474 22 474 9.78e-57 196
Msa0153990 AT5G48000.7 28.665 457 306 10 34 474 22 474 9.78e-57 196
Msa0153990 AT5G48000.6 28.665 457 306 10 34 474 22 474 9.78e-57 196
Msa0153990 AT5G48000.5 28.665 457 306 10 34 474 22 474 9.78e-57 196
Msa0153990 AT5G48000.3 28.665 457 306 10 34 474 22 474 9.78e-57 196
Msa0153990 AT5G48000.1 28.665 457 306 10 34 474 63 515 2.01e-56 196
Msa0153990 AT5G14400.2 30.979 439 263 13 49 473 1 413 6.27e-55 189
Msa0153990 AT1G55940.2 27.475 495 309 15 15 478 17 492 1.03e-53 188
Msa0153990 AT5G14400.3 31.401 414 245 12 49 448 1 389 5.02e-53 183
Msa0153990 AT1G55940.1 28.078 463 286 14 15 446 17 463 1.59e-51 181
Msa0153990 AT5G38970.2 27.415 383 270 6 96 474 4 382 5.17e-51 178
Msa0153990 AT5G38970.4 27.415 383 270 6 96 474 4 382 5.17e-51 178
Msa0153990 AT5G05690.3 30.484 351 227 7 130 471 2 344 4.85e-50 174
Msa0153990 AT1G78490.1 27.887 459 313 10 19 462 7 462 6.89e-50 177
Msa0153990 AT3G50660.2 29.500 400 239 9 44 407 39 431 2.26e-48 172
Msa0153990 AT4G15300.2 28.319 452 293 12 16 450 8 445 1.60e-47 171
Msa0153990 AT4G15300.3 28.285 449 291 12 19 450 1 435 3.09e-47 170
Msa0153990 AT1G65670.1 29.078 423 268 12 44 450 35 441 4.00e-47 170
Msa0153990 AT3G44970.1 26.569 478 319 13 19 478 11 474 1.70e-46 168
Msa0153990 AT5G14400.1 30.809 383 229 12 101 473 3 359 1.80e-42 154
Msa0153990 AT4G36380.2 28.319 339 232 6 44 372 69 406 4.06e-42 155
Msa0153990 AT1G12740.3 27.731 357 250 5 22 372 10 364 6.04e-42 153
Msa0153990 AT4G15393.2 26.562 448 299 17 19 450 11 444 6.10e-42 155
Msa0153990 AT5G36110.2 28.895 353 229 8 44 381 34 379 2.92e-40 149
Msa0153990 AT4G15310.1 27.640 445 299 11 22 450 11 448 4.56e-40 150
Msa0153990 AT2G42850.2 30.051 396 237 13 13 381 6 388 5.26e-40 148
Msa0153990 AT4G15300.1 26.752 471 292 14 19 450 1 457 7.35e-40 150
Msa0153990 AT1G78490.2 27.182 401 278 8 19 407 7 405 9.82e-39 145
Msa0153990 AT4G15396.1 25.223 448 307 16 19 450 11 446 6.91e-38 144
Msa0153990 AT4G15396.3 25.112 446 306 16 19 448 11 444 1.11e-36 141
Msa0153990 AT5G14400.4 29.377 337 218 10 49 372 1 330 8.15e-33 127
Msa0153990 AT4G15396.2 24.667 450 286 18 19 450 11 425 1.74e-31 126
Msa0153990 AT5G36130.1 41.176 136 78 2 340 473 1 136 9.43e-31 116
Msa0153990 AT4G15393.1 25.373 402 275 15 19 408 11 399 1.36e-30 122
Msa0153990 AT3G30290.1 24.934 381 266 11 80 450 5 375 3.24e-30 122
Msa0153990 AT4G15396.4 23.940 401 282 14 19 407 11 400 3.46e-27 113
Msa0153990 AT5G36140.1 28.777 278 174 10 44 306 33 301 5.68e-27 111
Msa0153990 AT5G04330.1 24.359 468 307 13 42 466 30 493 6.15e-27 114
Msa0153990 AT5G57220.1 25.257 487 308 15 12 463 1 466 4.61e-26 111
Msa0153990 AT2G46960.2 25.463 432 277 13 75 471 91 512 5.01e-26 111
Msa0153990 AT4G37400.1 27.707 314 205 10 163 463 168 472 1.66e-25 109
Msa0153990 AT4G37430.1 23.319 476 312 14 16 451 2 464 1.10e-24 107
Msa0153990 AT4G15393.3 24.000 400 250 14 19 408 11 366 1.70e-24 105
Msa0153990 AT3G20950.1 22.951 488 320 20 12 452 7 485 5.29e-24 105
Msa0153990 AT5G25120.1 23.404 470 309 15 18 450 6 461 4.00e-23 102
Msa0153990 AT3G20110.1 23.251 486 324 17 3 453 1 472 1.05e-22 101
Msa0153990 AT4G37370.1 27.982 218 151 4 236 452 248 460 1.24e-22 101
Msa0153990 AT3G20940.1 22.517 453 295 14 44 452 42 482 1.32e-22 101
Msa0153990 AT4G13770.1 23.830 470 302 15 21 450 14 467 1.82e-22 100
Msa0153990 AT5G25180.1 23.454 469 311 14 18 450 5 461 1.93e-22 100
Msa0153990 AT2G46960.1 25.064 391 249 12 115 471 16 396 2.44e-22 99.4
Msa0153990 AT3G32047.1 22.567 483 333 14 7 453 2 479 3.97e-22 99.8
Msa0153990 AT3G26150.1 24.947 469 296 16 44 469 30 485 4.47e-22 99.4
Msa0153990 AT3G28740.1 29.412 238 159 6 217 451 237 468 6.50e-22 99.0
Msa0153990 AT1G11680.1 21.951 451 303 12 40 463 35 463 8.12e-22 98.6
Msa0153990 AT1G74110.1 24.206 504 310 20 11 455 24 514 8.62e-22 99.0
Msa0153990 AT4G31500.1 23.516 455 283 13 44 450 29 466 1.46e-21 97.8
Msa0153990 AT3G26160.1 24.178 426 280 14 44 431 30 450 5.33e-21 96.3
Msa0153990 AT2G28850.1 22.511 462 323 14 37 471 30 483 1.50e-20 94.7
Msa0153990 AT2G25160.1 22.567 483 318 17 12 446 1 475 2.03e-20 94.7
Msa0153990 AT2G45550.1 25.607 453 276 18 44 450 38 475 3.09e-20 94.0
Msa0153990 AT2G14100.1 22.727 484 318 15 17 458 15 484 3.29e-20 94.0
Msa0153990 AT3G26180.1 23.770 488 309 16 7 450 1 469 3.32e-20 93.6
Msa0153990 AT2G46660.1 22.754 501 323 17 5 458 23 506 3.86e-20 93.6
Msa0153990 AT3G26170.1 23.333 450 292 14 44 450 30 469 3.98e-20 93.6
Msa0153990 AT5G25140.1 23.044 473 316 13 14 450 1 461 4.60e-20 93.2
Msa0153990 AT4G37320.1 27.391 230 154 5 236 457 249 473 6.07e-20 92.8
Msa0153990 AT4G37410.1 25.843 267 181 8 219 476 229 487 6.17e-20 92.8
Msa0153990 AT2G45560.1 25.000 480 298 18 20 450 9 475 9.61e-20 92.4
Msa0153990 AT2G27010.1 21.569 408 292 9 75 461 66 466 9.77e-20 92.4
Msa0153990 AT5G06905.1 23.926 489 309 16 23 458 9 487 1.14e-19 92.0
Msa0153990 AT4G36220.1 22.348 443 295 11 51 450 47 483 1.36e-19 92.0
Msa0153990 AT4G12320.1 24.059 478 302 15 18 450 20 481 1.71e-19 91.7
Msa0153990 AT4G15360.1 22.293 471 317 14 20 450 15 476 1.79e-19 91.7
Msa0153990 AT2G26170.1 22.049 449 301 11 43 446 44 488 2.03e-19 91.3
Msa0153990 AT2G26710.1 23.991 446 277 16 67 471 86 510 3.76e-19 90.5
Msa0153990 AT4G27710.1 24.424 434 277 14 75 471 93 512 3.95e-19 90.5
Msa0153990 AT4G37360.1 30.726 179 119 3 275 452 287 461 3.99e-19 90.5
Msa0153990 AT1G66540.2 28.163 245 161 8 228 466 70 305 5.05e-19 88.6
Msa0153990 AT1G64940.1 27.434 226 154 3 233 451 258 480 5.78e-19 90.1
Msa0153990 AT3G61880.1 24.078 461 289 17 33 448 53 497 7.94e-19 89.7
Msa0153990 AT4G12330.1 22.611 429 287 15 67 458 68 488 8.80e-19 89.4
Msa0153990 AT1G66540.1 28.163 245 161 8 228 466 129 364 1.31e-18 87.8
Msa0153990 AT3G61880.2 24.078 461 289 17 33 448 53 497 1.39e-18 89.0
Msa0153990 AT4G31940.1 29.130 230 132 10 236 445 260 478 1.43e-18 89.0
Msa0153990 AT2G23220.1 25.085 295 195 8 178 452 188 476 1.82e-18 88.6
Msa0153990 AT2G46950.1 24.138 435 279 15 73 471 146 565 1.83e-18 88.6
Msa0153990 AT3G20120.4 21.698 424 281 14 75 458 72 484 2.15e-18 88.2
Msa0153990 AT1G13110.1 22.996 474 317 14 20 450 3 471 2.63e-18 87.8
Msa0153990 AT1G64930.1 22.391 460 294 15 44 451 32 480 4.88e-18 87.0
Msa0153990 AT3G26270.1 22.727 462 301 14 33 450 21 470 5.54e-18 87.0
Msa0153990 AT3G20130.1 21.905 420 275 12 75 452 73 481 7.01e-18 86.7
Msa0153990 AT5G36220.2 26.512 215 152 4 240 453 113 322 7.14e-18 85.5
Msa0153990 AT3G48320.1 23.241 469 313 16 15 450 3 457 7.98e-18 86.3
Msa0153990 AT3G26200.1 23.629 474 297 15 44 466 28 487 1.29e-17 85.9
Msa0153990 AT1G11610.2 23.312 459 289 14 44 458 33 472 1.33e-17 85.9
Msa0153990 AT4G31950.1 27.149 221 135 7 231 431 243 457 1.36e-17 85.9
Msa0153990 AT3G26220.1 23.029 482 321 15 21 458 3 478 1.39e-17 85.9
Msa0153990 AT2G23190.1 27.434 226 156 5 228 452 287 505 1.42e-17 85.9
Msa0153990 AT4G12300.1 21.921 479 309 15 18 450 20 479 1.43e-17 85.9
Msa0153990 AT1G11610.1 23.312 459 289 14 44 458 33 472 1.44e-17 85.5
Msa0153990 AT5G25130.1 29.570 186 121 4 271 450 280 461 1.70e-17 85.5
Msa0153990 AT3G26190.1 22.991 448 295 12 44 450 28 466 1.75e-17 85.5
Msa0153990 AT2G45570.1 24.370 476 280 17 58 472 51 507 1.98e-17 85.1
Msa0153990 AT5G36220.1 28.729 181 124 3 274 453 292 468 2.08e-17 85.1
Msa0153990 AT4G31970.1 22.271 458 286 19 45 445 33 477 2.16e-17 85.1
Msa0153990 AT2G34490.1 22.857 490 328 18 17 471 13 487 2.49e-17 85.1
Msa0153990 AT3G52970.1 24.948 481 302 15 44 478 36 503 2.75e-17 84.7
Msa0153990 AT3G26230.1 22.363 474 315 12 21 450 3 467 3.43e-17 84.3
Msa0153990 AT3G20130.2 25.498 251 166 6 213 452 213 453 3.45e-17 84.3
Msa0153990 AT4G15330.1 21.941 474 328 16 19 458 14 479 3.89e-17 84.3
Msa0153990 AT1G58260.1 20.299 468 298 13 44 450 37 490 4.84e-17 84.3
Msa0153990 AT4G15110.1 24.453 274 149 8 234 458 294 558 5.18e-17 84.3
Msa0153990 AT3G20140.1 20.935 449 304 14 44 453 42 478 6.66e-17 83.6
Msa0153990 AT4G37340.1 29.282 181 121 4 274 452 286 461 9.16e-17 83.2
Msa0153990 AT3G53130.1 28.205 234 136 7 228 439 278 501 1.12e-16 83.2
Msa0153990 AT1G33730.1 27.753 227 146 8 238 455 130 347 1.20e-16 82.0
Msa0153990 AT1G33730.2 27.753 227 146 8 238 455 130 347 1.20e-16 82.0
Msa0153990 AT3G26300.1 22.796 465 320 17 20 450 6 465 1.48e-16 82.4
Msa0153990 AT3G26180.2 27.014 211 144 5 246 450 129 335 1.95e-16 81.3
Msa0153990 AT5G67310.1 29.444 180 116 5 274 449 297 469 2.35e-16 82.0
Msa0153990 AT3G20120.2 23.014 365 232 12 119 458 8 348 2.42e-16 80.9
Msa0153990 AT3G20120.3 23.014 365 232 12 119 458 8 348 2.42e-16 80.9
Msa0153990 AT3G20120.1 23.014 365 232 12 119 458 8 348 2.42e-16 80.9
Msa0153990 AT1G31800.1 27.807 187 123 4 272 451 361 542 2.46e-16 82.0
Msa0153990 AT3G26280.1 23.093 472 308 15 19 450 15 471 2.52e-16 81.6
Msa0153990 AT3G48290.1 23.476 443 304 15 35 450 24 458 2.67e-16 81.6
Msa0153990 AT3G44970.2 23.343 347 241 11 32 361 21 359 3.04e-16 80.9
Msa0153990 AT3G26280.2 23.093 472 308 15 19 450 32 488 3.08e-16 81.6
Msa0153990 AT1G50520.1 21.018 452 298 11 69 474 68 506 3.83e-16 81.3
Msa0153990 AT4G37330.1 22.777 461 320 17 20 452 6 458 3.94e-16 81.3
Msa0153990 AT5G24900.1 22.545 448 293 15 69 474 90 525 4.37e-16 81.3
Msa0153990 AT3G52970.2 24.646 495 300 17 44 478 36 517 9.42e-16 80.1
Msa0153990 AT3G20960.2 21.532 483 330 16 12 453 7 481 1.02e-15 80.1
Msa0153990 AT2G26170.2 25.322 233 162 4 223 446 176 405 1.29e-15 79.3
Msa0153990 AT4G37310.1 26.316 228 158 5 248 470 266 488 1.34e-15 79.7
Msa0153990 AT5G24910.1 21.491 456 303 15 61 473 86 529 1.48e-15 79.7
Msa0153990 AT5G24900.2 22.762 391 249 14 125 474 30 408 1.92e-15 78.6
Msa0153990 AT3G26210.1 23.349 424 259 15 74 448 60 466 4.23e-15 78.2
Msa0153990 AT3G20090.2 21.513 423 275 15 75 453 74 483 5.60e-15 77.8
Msa0153990 AT1G13080.1 26.042 192 133 3 271 456 287 475 6.39e-15 77.4
Msa0153990 AT1G64950.1 26.106 226 157 3 233 451 257 479 6.52e-15 77.4
Msa0153990 AT3G48300.1 22.595 447 310 19 35 453 19 457 7.76e-15 77.0
Msa0153990 AT3G48300.2 22.595 447 310 19 35 453 21 459 7.81e-15 77.0
Msa0153990 AT3G48310.1 21.719 442 313 15 35 450 23 457 7.93e-15 77.0
Msa0153990 AT1G11600.1 28.502 207 129 4 253 448 280 478 7.93e-15 77.0
Msa0153990 AT1G13080.2 26.882 186 127 4 271 450 169 351 8.65e-15 76.3
Msa0153990 AT1G13100.1 25.592 211 140 4 271 467 283 490 9.81e-15 77.0
Msa0153990 AT4G15330.2 23.184 358 238 12 119 458 113 451 1.04e-14 76.6
Msa0153990 AT3G25180.1 30.675 163 103 5 275 431 300 458 1.46e-14 76.3
Msa0153990 AT2G12190.1 22.086 489 318 13 44 478 32 511 1.80e-14 76.3
Msa0153990 AT3G48270.1 22.788 452 296 18 35 450 22 456 2.47e-14 75.5
Msa0153990 AT3G20935.1 26.966 178 116 3 285 452 134 307 2.67e-14 74.7
Msa0153990 AT5G35715.1 21.975 405 267 11 87 450 8 404 3.99e-14 74.7
Msa0153990 AT4G15380.1 21.739 414 273 12 75 449 73 474 4.05e-14 75.1
Msa0153990 AT4G15350.1 21.028 428 286 13 69 454 60 477 5.58e-14 74.7
Msa0153990 AT2G45580.2 27.692 195 125 5 272 455 143 332 6.38e-14 73.6
Msa0153990 AT3G20090.1 23.077 234 157 6 236 453 119 345 1.02e-13 73.2
Msa0153990 AT2G45580.1 27.692 195 125 5 272 455 297 486 1.68e-13 73.2
Msa0153990 AT3G53300.1 23.394 436 274 14 42 431 26 447 1.95e-13 72.8
Msa0153990 AT1G28430.1 18.663 359 261 10 119 460 143 487 3.33e-13 72.0
Msa0153990 AT3G20960.1 23.043 230 158 5 234 453 158 378 3.39e-13 71.6
Msa0153990 AT1G33720.4 26.432 227 149 8 238 455 134 351 4.82e-13 70.9
Msa0153990 AT1G33720.3 26.432 227 149 8 238 455 134 351 4.82e-13 70.9
Msa0153990 AT1G33720.5 26.432 227 149 8 238 455 134 351 4.82e-13 70.9
Msa0153990 AT1G50560.1 21.941 237 162 6 237 458 261 489 6.05e-13 71.2
Msa0153990 AT3G14620.1 21.751 377 261 10 89 439 109 477 4.30e-12 68.6
Msa0153990 AT4G13290.1 21.573 445 292 18 44 450 33 458 2.24e-11 66.2
Msa0153990 AT4G13310.1 22.737 453 303 17 35 450 23 465 2.94e-11 65.9
Msa0153990 AT5G52320.1 23.529 272 171 10 228 474 241 500 4.49e-11 65.5
Msa0153990 AT2G22330.2 22.727 220 158 4 247 458 320 535 7.00e-11 65.1
Msa0153990 AT2G22330.1 23.256 215 153 4 247 453 297 507 7.46e-11 64.7

Find 149 sgRNAs with CRISPR-Local

Find 503 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTCATGGAACTTCTTAT+TGG 0.205670 1_4:-18174227 Msa0153990:CDS
TGTCTCATTGGGCCTATAAA+TGG 0.210451 1_4:+18166999 None:intergenic
AACATTTGTCTTTGTCTCTA+TGG 0.210879 1_4:+18175193 None:intergenic
CTTGTGGAGAAGAAAGAATT+TGG 0.230575 1_4:+18175108 None:intergenic
GAAGTTCCATGAAGATTTAA+AGG 0.233024 1_4:+18174234 None:intergenic
TCTTATCCTTTAAATCTTCA+TGG 0.249771 1_4:-18174240 Msa0153990:CDS
TTCTTTAGAGTTATCTTTAC+TGG 0.255766 1_4:+18167138 None:intergenic
CATCTCTTGCAAGGTGTTGA+TGG 0.264559 1_4:+18174482 None:intergenic
GGAAGGACTTTCCAACCTTT+TGG 0.265007 1_4:+18170992 None:intergenic
CTATCCTTCCTTTCCTTCAA+TGG 0.266112 1_4:-18175224 Msa0153990:CDS
AGAAAGGAGAGCAGGAATTA+TGG 0.273001 1_4:-18173704 Msa0153990:CDS
CATGCAATTTGTAGCATGTT+AGG 0.292625 1_4:-18167076 Msa0153990:three_prime_UTR
TTTACTGGTAATCCATGTTT+TGG 0.307736 1_4:+18167153 None:intergenic
CCTATCATCTTCTCTTTGCT+TGG 0.320756 1_4:+18174654 None:intergenic
AATTATGGTGGTGGGTTGTT+GGG 0.341580 1_4:-18173689 Msa0153990:CDS
GAATTATGGTGGTGGGTTGT+TGG 0.345665 1_4:-18173690 Msa0153990:CDS
ATATTGTATAGTGAAAATTA+AGG 0.346912 1_4:+18175466 None:intergenic
CCAAATGGCATATATGTGTT+TGG 0.353790 1_4:+18170405 None:intergenic
AATGTTTATAAAATTGTAAA+GGG 0.365557 1_4:-18166880 Msa0153990:three_prime_UTR
AATGGAGATGGAATTCAATA+TGG 0.368593 1_4:-18167189 Msa0153990:CDS
TGTTGAAAGAACAAAGCTTC+TGG 0.384343 1_4:+18174630 None:intergenic
TTGCACTTCTTAATGTCTCT+TGG 0.386421 1_4:+18171077 None:intergenic
GTTGAGTGTACAAAACAATA+AGG 0.392066 1_4:+18175336 None:intergenic
AGGTGGCAAGTTGTGGGAAA+TGG 0.393836 1_4:-18167207 Msa0153990:CDS
CCAAACACATATATGCCATT+TGG 0.398411 1_4:-18170405 Msa0153990:CDS
CACCTTGCAAGAGATGAAAA+AGG 0.400822 1_4:-18174475 Msa0153990:intron
GTGGCTGCAAATTCAGCTTT+TGG 0.406674 1_4:-18174330 Msa0153990:CDS
TTCTTATTGGAAGGCATTGA+AGG 0.410259 1_4:-18174214 Msa0153990:intron
GTCTCATTGGGCCTATAAAT+GGG 0.410432 1_4:+18167000 None:intergenic
GAGGGAAAGGGAATGAGAAT+TGG 0.410766 1_4:+18175390 None:intergenic
ACATATATGCCATTTGGAAA+TGG 0.411541 1_4:-18170399 Msa0153990:CDS
TATTGTATAGTGAAAATTAA+GGG 0.416595 1_4:+18175467 None:intergenic
ATCATCTTCTCTTTGCTTGG+AGG 0.417369 1_4:+18174657 None:intergenic
GTTTGACCCTTCAAGATTTG+AGG 0.417850 1_4:-18170918 Msa0153990:intron
AAATGTTTATAAAATTGTAA+AGG 0.419928 1_4:-18166881 Msa0153990:three_prime_UTR
TCAATGGGCTGGCCTTACTT+TGG 0.421222 1_4:-18175159 Msa0153990:CDS
TATGGTGTTTCCACCATTGA+AGG 0.423550 1_4:+18175211 None:intergenic
GGGAAAGTCGTGGACTTTCA+TGG 0.427875 1_4:-18172618 Msa0153990:CDS
ATTCTTACCTCAAATCTTGA+AGG 0.432768 1_4:+18170911 None:intergenic
CAGGTGTGCTAGTGCTGCTT+AGG 0.435304 1_4:+18175526 None:intergenic
TCTTTGCTTGGAGGGTATGT+TGG 0.436270 1_4:+18174666 None:intergenic
TTTAAAATTACCTGTATGAA+AGG 0.442438 1_4:+18170310 None:intergenic
TGAAATAAAAGAGATGGAAA+TGG 0.445191 1_4:-18174307 Msa0153990:CDS
TCTTCTCCACAAGGCAGAAA+AGG 0.446028 1_4:-18175098 Msa0153990:intron
TGCTTTAGGTGGCAAGTTGT+GGG 0.446990 1_4:-18167213 Msa0153990:intron
TTGCTTTAGGTGGCAAGTTG+TGG 0.450644 1_4:-18167214 Msa0153990:intron
AAGAGAATTGTATCATTGCT+TGG 0.456903 1_4:-18174277 Msa0153990:CDS
TAGAAAGAAGAAAGGAGAGC+AGG 0.460327 1_4:-18173712 Msa0153990:CDS
ACCATCTCACCCTTTCATAC+AGG 0.462924 1_4:-18170320 Msa0153990:intron
GCATGACAATGTCAATCTCT+TGG 0.463011 1_4:-18173531 Msa0153990:CDS
CATAGGTGGCAAAAGGGAGT+TGG 0.464144 1_4:+18175558 None:intergenic
AAGAGGAGCAATATAATGAA+AGG 0.466239 1_4:+18175252 None:intergenic
TTGTGGAGAAGAAAGAATTT+GGG 0.466276 1_4:+18175109 None:intergenic
ACATAATGTTTATACATACA+TGG 0.467030 1_4:+18166943 None:intergenic
GGCAGATGCCCTTCACAAGC+AGG 0.468177 1_4:-18172585 Msa0153990:CDS
CCAAGCAAAGAGAAGATGAT+AGG 0.468196 1_4:-18174654 Msa0153990:CDS
TCATCTTCTCTTTGCTTGGA+GGG 0.468509 1_4:+18174658 None:intergenic
GTTACTCCATTCCAAAAGGT+TGG 0.469052 1_4:-18171003 Msa0153990:CDS
GAATAGATAGTGATGAATAT+AGG 0.476642 1_4:+18175412 None:intergenic
CTGAGAAATATGTACTATAC+AGG 0.476666 1_4:+18175507 None:intergenic
ATAGGTGGCAAAAGGGAGTT+GGG 0.476820 1_4:+18175559 None:intergenic
GAGGGTAATAGAAAGAAGAA+AGG 0.481964 1_4:-18173720 Msa0153990:CDS
GACTTTCATGGGAGGATACC+AGG 0.485602 1_4:-18172606 Msa0153990:CDS
AAATAAGAAGCAAACTTGCT+AGG 0.490793 1_4:-18172639 Msa0153990:CDS
AATGTTTCATAGGTGGCAAA+AGG 0.491722 1_4:+18175551 None:intergenic
AATATTGATGAAGGCAAGGA+AGG 0.493298 1_4:-18173762 Msa0153990:intron
GGAATTCTGTTGAGTGGCAG+AGG 0.495313 1_4:-18173668 Msa0153990:CDS
GGGTCAAACTTGTGTGGTTG+AGG 0.499290 1_4:+18170932 None:intergenic
TTAGCTATTTATAGAGGGAA+AGG 0.499471 1_4:+18175377 None:intergenic
GTTGTGTTAGCTATTTATAG+AGG 0.500748 1_4:+18175371 None:intergenic
GTACCAACTAACTGATTCTC+AGG 0.500854 1_4:-18173633 Msa0153990:CDS
TGCTTAGGAAAATGTTTCAT+AGG 0.501808 1_4:+18175541 None:intergenic
CCACAGCTAGTGTTCTAACA+TGG 0.502575 1_4:-18173568 Msa0153990:CDS
CAGGTGGCTGATAATATCAT+TGG 0.502884 1_4:-18173614 Msa0153990:CDS
GCTTGTGAAGGGCATCTGCC+TGG 0.502887 1_4:+18172588 None:intergenic
AGAGGAGCAATATAATGAAA+GGG 0.504519 1_4:+18175253 None:intergenic
ATGGTTCTATTTGCCCAAGT+TGG 0.507483 1_4:+18174501 None:intergenic
TCATGGAACTTCTTATTGGA+AGG 0.508107 1_4:-18174223 Msa0153990:CDS
CAAGGTTACTCCATTCCAAA+AGG 0.508150 1_4:-18171007 Msa0153990:CDS
TCAGAAAATGAGAGCAAAGT+GGG 0.509018 1_4:-18167101 Msa0153990:three_prime_UTR
AATAAGAAGCAAACTTGCTA+GGG 0.509966 1_4:-18172638 Msa0153990:CDS
TAAGGCCAGCCCATTGAACC+AGG 0.510800 1_4:+18175165 None:intergenic
TTAAAATTACCTGTATGAAA+GGG 0.510930 1_4:+18170311 None:intergenic
CCCATTGGCGGCATTATGCA+TGG 0.511183 1_4:-18166967 Msa0153990:three_prime_UTR
CCATGCATAATGCCGCCAAT+GGG 0.515841 1_4:+18166967 None:intergenic
ATTGTATCATTGCTTGGAGA+AGG 0.516728 1_4:-18174271 Msa0153990:CDS
TTGAGGGTCTCTCCAAAGTA+AGG 0.518210 1_4:+18175147 None:intergenic
TCCTTCCTTTCCTTCAATGG+TGG 0.518758 1_4:-18175221 Msa0153990:CDS
CAAAACAATAAGGTGAAAGA+TGG 0.521743 1_4:+18175346 None:intergenic
GAGAGCAGGAATTATGGTGG+TGG 0.528220 1_4:-18173698 Msa0153990:CDS
GGTCAAACTTGTGTGGTTGA+GGG 0.530002 1_4:+18170933 None:intergenic
ATATTCAAGACACACATACT+AGG 0.530311 1_4:-18174762 Msa0153990:CDS
GGAAAGTCGTGGACTTTCAT+GGG 0.532326 1_4:-18172617 Msa0153990:CDS
TAGCTATTTATAGAGGGAAA+GGG 0.540603 1_4:+18175378 None:intergenic
GCCATGCATAATGCCGCCAA+TGG 0.544537 1_4:+18166966 None:intergenic
AGCTTAGCAAGCTCACTACC+AGG 0.548207 1_4:+18170363 None:intergenic
TTGAACTAGCTTCTTGAGCA+TGG 0.548888 1_4:+18174593 None:intergenic
TAGTGAGCTTGCTAAGCTTG+AGG 0.549149 1_4:-18170358 Msa0153990:CDS
AATGGAGTCCACTCTTGTCC+TGG 0.549474 1_4:-18170381 Msa0153990:CDS
TCCACCATTGAAGGAAAGGA+AGG 0.549770 1_4:+18175220 None:intergenic
GAATGCTTCTAAAGAGTGGA+AGG 0.550060 1_4:+18170975 None:intergenic
AGCACTGCTCTAGCTGCCTC+AGG 0.552029 1_4:+18174714 None:intergenic
TTTGAATGAGAGTATAAGGA+GGG 0.555346 1_4:-18173738 Msa0153990:CDS
GAGTGGACTCCATTTCCAAA+TGG 0.556423 1_4:+18170390 None:intergenic
CAAGTTGTGGGAAATGGAGA+TGG 0.556760 1_4:-18167201 Msa0153990:CDS
AAAGGGTGAGATGGTGAAGG+AGG 0.557982 1_4:+18170328 None:intergenic
TTGTATCATTGCTTGGAGAA+GGG 0.560306 1_4:-18174270 Msa0153990:CDS
TGTTTCCACCATTGAAGGAA+AGG 0.561586 1_4:+18175216 None:intergenic
CCACCTGAGAATCAGTTAGT+TGG 0.563660 1_4:+18173630 None:intergenic
TAGAGAAGCAGTTAGAGATG+TGG 0.564865 1_4:-18171035 Msa0153990:CDS
TAGTGAAAATTAAGGGGTGT+CGG 0.565892 1_4:+18175474 None:intergenic
ATGTTTCATAGGTGGCAAAA+GGG 0.566914 1_4:+18175552 None:intergenic
TTCTTACCTCAAATCTTGAA+GGG 0.569330 1_4:+18170912 None:intergenic
TTAAGGGGTGTCGGTGTGTG+AGG 0.571812 1_4:+18175483 None:intergenic
TTGTGTTAGCTATTTATAGA+GGG 0.576967 1_4:+18175372 None:intergenic
CAAATTCTTTCTTCTCCACA+AGG 0.581067 1_4:-18175107 Msa0153990:CDS
AGAGCAGGAATTATGGTGGT+GGG 0.584862 1_4:-18173697 Msa0153990:CDS
TTAGGAAAATGTTTCATAGG+TGG 0.590225 1_4:+18175544 None:intergenic
AAGGAGAGCAGGAATTATGG+TGG 0.600653 1_4:-18173701 Msa0153990:CDS
CATAATGTTTATACATACAT+GGG 0.601772 1_4:+18166944 None:intergenic
GGCATATATGTGTTTGGTCG+AGG 0.601844 1_4:+18170411 None:intergenic
TTGTTGGGAATTCTGTTGAG+TGG 0.608457 1_4:-18173674 Msa0153990:CDS
ATTGTATAGTGAAAATTAAG+GGG 0.609348 1_4:+18175468 None:intergenic
GTTAGAGATGTGGAGCTGCA+AGG 0.610445 1_4:-18171025 Msa0153990:CDS
ACAAAACTAGTTCCCATTGG+CGG 0.615605 1_4:-18166979 Msa0153990:three_prime_UTR
AACAATAAGGTGAAAGATGG+CGG 0.619078 1_4:+18175349 None:intergenic
ACCTGTATGAAAGGGTGAGA+TGG 0.620275 1_4:+18170319 None:intergenic
GAGACAAAACTAGTTCCCAT+TGG 0.620926 1_4:-18166982 Msa0153990:three_prime_UTR
GCTCACTACCAGGACAAGAG+TGG 0.624894 1_4:+18170373 None:intergenic
GCAGATGCCCTTCACAAGCA+GGG 0.625434 1_4:-18172584 Msa0153990:intron
CACAGCTAGTGTTCTAACAT+GGG 0.626984 1_4:-18173567 Msa0153990:CDS
TTCAGAAAATGAGAGCAAAG+TGG 0.628201 1_4:-18167102 Msa0153990:three_prime_UTR
TGATGAATGCTTCTAAAGAG+TGG 0.629840 1_4:+18170971 None:intergenic
GAAGCTTTGTTCTTTCAACA+AGG 0.636701 1_4:-18174627 Msa0153990:CDS
TGTGGTTGAGGGAAGAAATG+AGG 0.641955 1_4:+18170944 None:intergenic
CCATGTTAGAACACTAGCTG+TGG 0.646833 1_4:+18173568 None:intergenic
ATGAAAGGGTGAGATGGTGA+AGG 0.646984 1_4:+18170325 None:intergenic
CTTGAAGGGTCAAACTTGTG+TGG 0.648197 1_4:+18170926 None:intergenic
AGGCCAGCCCATTGAACCAG+GGG 0.649208 1_4:+18175167 None:intergenic
ATATATGTGTTTGGTCGAGG+TGG 0.657816 1_4:+18170414 None:intergenic
CAGAAAATGAGAGCAAAGTG+GGG 0.667160 1_4:-18167100 Msa0153990:three_prime_UTR
AAGGCCAGCCCATTGAACCA+GGG 0.668384 1_4:+18175166 None:intergenic
CCAACTAACTGATTCTCAGG+TGG 0.680586 1_4:-18173630 Msa0153990:CDS
AAACTTGCTAGGGAAAGTCG+TGG 0.684758 1_4:-18172628 Msa0153990:CDS
GGACTTGATATCATCACACA+AGG 0.686125 1_4:+18174735 None:intergenic
AAGTCGTGGACTTTCATGGG+AGG 0.705204 1_4:-18172614 Msa0153990:CDS
AAGTGATGTGAAGAATTGCA+TGG 0.716557 1_4:+18175302 None:intergenic
GGCCAGCCCATTGAACCAGG+GGG 0.732104 1_4:+18175168 None:intergenic
TGTGATGATATCAAGTCCTG+AGG 0.742960 1_4:-18174730 Msa0153990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAATTGTAGTAAAATA+TGG - chr1_4:18167524-18167543 Msa0153990:intron 10.0%
!!! TATATATTTTTCGTATTTAT+AGG + chr1_4:18170030-18170049 None:intergenic 10.0%
!! CAAATATAGAAATAATATAT+TGG - chr1_4:18170135-18170154 Msa0153990:intron 10.0%
!! ATGAATAATATTAAAACAAA+GGG + chr1_4:18170278-18170297 None:intergenic 10.0%
!! AATGAATAATATTAAAACAA+AGG + chr1_4:18170279-18170298 None:intergenic 10.0%
!!! TTTTAATTACTATTTTACAA+GGG + chr1_4:18170418-18170437 None:intergenic 10.0%
!!! ATTTTAATTACTATTTTACA+AGG + chr1_4:18170419-18170438 None:intergenic 10.0%
!!! TCATTAATTATTTTTATTAG+GGG + chr1_4:18170599-18170618 None:intergenic 10.0%
!!! TGTATTTTTATTTTTTTTGA+GGG + chr1_4:18170911-18170930 None:intergenic 10.0%
!!! TTGTATTTTTATTTTTTTTG+AGG + chr1_4:18170912-18170931 None:intergenic 10.0%
!!! TCATATTAAAATTTTGAATT+TGG - chr1_4:18171166-18171185 Msa0153990:intron 10.0%
!! ATAAATGTTAAATAATAGTT+TGG + chr1_4:18171270-18171289 None:intergenic 10.0%
!! TATATATATACTAATTGTAT+TGG + chr1_4:18172727-18172746 None:intergenic 10.0%
!! TAAATGTACAAATATATTAA+TGG + chr1_4:18173061-18173080 None:intergenic 10.0%
!!! TTTTTTATAAAGTAAAGAAA+GGG + chr1_4:18173734-18173753 None:intergenic 10.0%
!!! TTTTTTTATAAAGTAAAGAA+AGG + chr1_4:18173735-18173754 None:intergenic 10.0%
!!! ATTGTATTATTTTTTTTTGA+AGG + chr1_4:18174284-18174303 None:intergenic 10.0%
!! TTCAAAAAAAAATAATACAA+TGG - chr1_4:18174283-18174302 Msa0153990:CDS 10.0%
!! AAATGTTTATAAAATTGTAA+AGG - chr1_4:18175563-18175582 Msa0153990:five_prime_UTR 10.0%
!! AATGTTTATAAAATTGTAAA+GGG - chr1_4:18175564-18175583 Msa0153990:five_prime_UTR 10.0%
!! TATTGTATAGTGAAAATTAA+GGG + chr1_4:18166980-18166999 None:intergenic 15.0%
!! ATATTGTATAGTGAAAATTA+AGG + chr1_4:18166981-18167000 None:intergenic 15.0%
!!! ATTCAAAAACTTTTATTTTG+TGG - chr1_4:18167583-18167602 Msa0153990:intron 15.0%
!!! TTTGATGATTTTGAATTTAA+TGG - chr1_4:18167642-18167661 Msa0153990:intron 15.0%
!!! ATAAAGAAATTTTCTTGTTT+TGG - chr1_4:18168067-18168086 Msa0153990:intron 15.0%
!! AAAAAAAACCTCAAATAAAA+TGG - chr1_4:18169605-18169624 Msa0153990:intron 15.0%
!! ATCAAGAAAATAATAAAATC+AGG + chr1_4:18169738-18169757 None:intergenic 15.0%
!!! TTACATCTTTTTTTTTAACA+AGG + chr1_4:18169972-18169991 None:intergenic 15.0%
!!! GATATTTACTTTTTGTTTTA+GGG - chr1_4:18170073-18170092 Msa0153990:intron 15.0%
!! AACCAATGTAATAAATTATA+TGG + chr1_4:18170354-18170373 None:intergenic 15.0%
!!! TTTAATTACTATTTTACAAG+GGG + chr1_4:18170417-18170436 None:intergenic 15.0%
!!! AAAATATTGTCCATTTTTAT+AGG - chr1_4:18170434-18170453 Msa0153990:intron 15.0%
!!! AATATTTTCTTTTGTTATGT+AGG + chr1_4:18170768-18170787 None:intergenic 15.0%
!!! TTTTTTTAAATCTTGTACAT+TGG - chr1_4:18170977-18170996 Msa0153990:CDS 15.0%
!!! ATTTTAACTTTTTCTAATAG+TGG + chr1_4:18172184-18172203 None:intergenic 15.0%
!!! ATCTAACAAATGATTTATTT+TGG + chr1_4:18172449-18172468 None:intergenic 15.0%
!! TTTATTAGATGAAATTTAAG+AGG - chr1_4:18172560-18172579 Msa0153990:intron 15.0%
!!! CTAATTTTTTTTTAACTCTT+CGG + chr1_4:18173002-18173021 None:intergenic 15.0%
!! ATTTGTACATTTATTGATAA+TGG - chr1_4:18173068-18173087 Msa0153990:intron 15.0%
!! TTTCTTTAGCTAATATATAT+TGG + chr1_4:18173204-18173223 None:intergenic 15.0%
!! GAATGTAAATATCTTTATAA+AGG - chr1_4:18173461-18173480 Msa0153990:intron 15.0%
!!! TTTATATGCTTATTTTTGTT+TGG + chr1_4:18173540-18173559 None:intergenic 15.0%
!!! TTTTATATGTATACGTATAT+TGG - chr1_4:18173858-18173877 Msa0153990:intron 15.0%
!! CAATATGAAACTTAAAATTT+AGG + chr1_4:18174041-18174060 None:intergenic 15.0%
!!! TTTTTGTTTTATAAACCTAT+TGG - chr1_4:18174577-18174596 Msa0153990:CDS 15.0%
!! TTCAATGTATTTGATATTAA+GGG + chr1_4:18174639-18174658 None:intergenic 15.0%
!! TTTCAATGTATTTGATATTA+AGG + chr1_4:18174640-18174659 None:intergenic 15.0%
!! AAAATGAAAAGAATGATTAA+GGG + chr1_4:18174949-18174968 None:intergenic 15.0%
!! AAAAATGAAAAGAATGATTA+AGG + chr1_4:18174950-18174969 None:intergenic 15.0%
!!! TCATTTTTTATGAATAAGAA+TGG - chr1_4:18174962-18174981 Msa0153990:intron 15.0%
!! ATTGTATAGTGAAAATTAAG+GGG + chr1_4:18166979-18166998 None:intergenic 20.0%
!!! ATTTGTTGTGTTCAATTTTT+CGG + chr1_4:18167458-18167477 None:intergenic 20.0%
!!! TTTTGAATTTAATGGAACAT+AGG - chr1_4:18167650-18167669 Msa0153990:intron 20.0%
!! AGTAAAATTTATGCATTCTT+TGG - chr1_4:18168031-18168050 Msa0153990:intron 20.0%
!! ATTCAATTATTTCAATGTTG+AGG - chr1_4:18169086-18169105 Msa0153990:intron 20.0%
!! TTCAATTATTTCAATGTTGA+GGG - chr1_4:18169087-18169106 Msa0153990:intron 20.0%
!!! TTTTCATTGGTTAAAAACAA+TGG - chr1_4:18169230-18169249 Msa0153990:intron 20.0%
!! AAAAGAAAGTTGTTACAAAA+TGG - chr1_4:18169300-18169319 Msa0153990:intron 20.0%
!! TGTAATATACAGAAATATAG+TGG + chr1_4:18169415-18169434 None:intergenic 20.0%
!! AGAAAATAATAAAATCAGGA+TGG + chr1_4:18169734-18169753 None:intergenic 20.0%
!!! AAATGTATAAGTTGATTACT+TGG - chr1_4:18169929-18169948 Msa0153990:intron 20.0%
!! TATTTATAGGAACAATGAAT+TGG + chr1_4:18170017-18170036 None:intergenic 20.0%
!!! GGATATTTACTTTTTGTTTT+AGG - chr1_4:18170072-18170091 Msa0153990:intron 20.0%
!!! CTAAAATTTTGTGCATTTAA+TGG + chr1_4:18170197-18170216 None:intergenic 20.0%
!! AGCCATATAATTTATTACAT+TGG - chr1_4:18170349-18170368 Msa0153990:CDS 20.0%
!!! TATTACATTGGTTTTTTTAC+AGG - chr1_4:18170361-18170380 Msa0153990:CDS 20.0%
!! AAAAAATGGTCCTATAAAAA+TGG + chr1_4:18170447-18170466 None:intergenic 20.0%
!! GTATCTCGTAATTTAAAAAA+TGG + chr1_4:18170461-18170480 None:intergenic 20.0%
!! GGTTATCATTGTATTATTAA+GGG + chr1_4:18170528-18170547 None:intergenic 20.0%
!! TGGTTATCATTGTATTATTA+AGG + chr1_4:18170529-18170548 None:intergenic 20.0%
!! TTAATAATACAATGATAACC+AGG - chr1_4:18170528-18170547 Msa0153990:intron 20.0%
!! TAATAATACAATGATAACCA+GGG - chr1_4:18170529-18170548 Msa0153990:intron 20.0%
!! ACATAAACATGAGTTATAAT+AGG + chr1_4:18171236-18171255 None:intergenic 20.0%
!! TTATATTAGATGAGTCATAA+GGG + chr1_4:18171562-18171581 None:intergenic 20.0%
!! TATCCTTATATATTCATGTA+CGG - chr1_4:18171587-18171606 Msa0153990:intron 20.0%
!! TCATATCATAGAAAATGAAA+GGG + chr1_4:18171753-18171772 None:intergenic 20.0%
!! TTCATATCATAGAAAATGAA+AGG + chr1_4:18171754-18171773 None:intergenic 20.0%
!! TTAAAATTACCTGTATGAAA+GGG + chr1_4:18172136-18172155 None:intergenic 20.0%
!!! TTTAAAATTACCTGTATGAA+AGG + chr1_4:18172137-18172156 None:intergenic 20.0%
!! AAAATAATTGTACCAAAAGT+TGG - chr1_4:18172199-18172218 Msa0153990:intron 20.0%
!!! TTTTTGTCACAATAAATCTT+TGG + chr1_4:18172475-18172494 None:intergenic 20.0%
!! GACAAAAAAGAAAAACTAAA+TGG - chr1_4:18172487-18172506 Msa0153990:intron 20.0%
!!! AAGACAAACAATTTTGTTAA+AGG + chr1_4:18172841-18172860 None:intergenic 20.0%
!! CCTATAATAAGTAACTAATT+AGG + chr1_4:18173098-18173117 None:intergenic 20.0%
!! CCTAATTAGTTACTTATTAT+AGG - chr1_4:18173095-18173114 Msa0153990:intron 20.0%
!! TTGGTTTAATGTTAAAAAGA+CGG - chr1_4:18173384-18173403 Msa0153990:intron 20.0%
!!! TTTTCTCTAAAAATAACAAC+AGG + chr1_4:18173439-18173458 None:intergenic 20.0%
!! TGGTAGAAGAAAAAAAATTA+GGG + chr1_4:18173520-18173539 None:intergenic 20.0%
!! TTGGTAGAAGAAAAAAAATT+AGG + chr1_4:18173521-18173540 None:intergenic 20.0%
!! TATTACTACTACACAAAATA+TGG - chr1_4:18173608-18173627 Msa0153990:CDS 20.0%
!!! TAGGACTATTTATATTGATT+TGG - chr1_4:18173695-18173714 Msa0153990:CDS 20.0%
!!! TTCTAAGATTACAAATAGAA+TGG - chr1_4:18174252-18174271 Msa0153990:CDS 20.0%
!!! TTCCTTTCATTATTTTGATA+AGG + chr1_4:18174351-18174370 None:intergenic 20.0%
!! AATAATAGTCAAAGAATAGA+GGG + chr1_4:18174559-18174578 None:intergenic 20.0%
!! AAATAATAGTCAAAGAATAG+AGG + chr1_4:18174560-18174579 None:intergenic 20.0%
!! TGCAAAAATAAGTTATAACA+TGG + chr1_4:18174750-18174769 None:intergenic 20.0%
!!! TGAGAAATATTATACACTTT+TGG + chr1_4:18175001-18175020 None:intergenic 20.0%
!! AAAAAAACGATTAATACTAC+AGG + chr1_4:18175028-18175047 None:intergenic 20.0%
!!! GACATATTTTTTCAAATCAT+TGG + chr1_4:18175152-18175171 None:intergenic 20.0%
!! CATAATGTTTATACATACAT+GGG + chr1_4:18175503-18175522 None:intergenic 20.0%
!! ACATAATGTTTATACATACA+TGG + chr1_4:18175504-18175523 None:intergenic 20.0%
! GAATAGATAGTGATGAATAT+AGG + chr1_4:18167035-18167054 None:intergenic 25.0%
! TTGTGTTAGCTATTTATAGA+GGG + chr1_4:18167075-18167094 None:intergenic 25.0%
!!! ACAACAAATTGTTATTTACG+TGG - chr1_4:18167469-18167488 Msa0153990:intron 25.0%
! AATTTAATGGAACATAGGTA+TGG - chr1_4:18167655-18167674 Msa0153990:intron 25.0%
! TAAAAATTCTGTCTCTTATG+TGG - chr1_4:18167897-18167916 Msa0153990:intron 25.0%
!! GAACCAATTTTTGTACAATT+TGG + chr1_4:18167924-18167943 None:intergenic 25.0%
!!! TATATAGTATGCTTTTGAAG+TGG - chr1_4:18168095-18168114 Msa0153990:intron 25.0%
!! TTTTGGTGAAATAAAAGAGA+TGG - chr1_4:18168131-18168150 Msa0153990:intron 25.0%
! TGAAATAAAAGAGATGGAAA+TGG - chr1_4:18168137-18168156 Msa0153990:intron 25.0%
! TCTTATCCTTTAAATCTTCA+TGG - chr1_4:18168204-18168223 Msa0153990:intron 25.0%
!!! CAATGTTTTAAAAACCGAAT+CGG + chr1_4:18168582-18168601 None:intergenic 25.0%
! GATGAAATGAATATTGATGA+AGG - chr1_4:18168673-18168692 Msa0153990:intron 25.0%
!!! TCTTTTTTCTCTCTTTTCAT+TGG - chr1_4:18169217-18169236 Msa0153990:intron 25.0%
!!! ATTTACGTCCATTTTATTTG+AGG + chr1_4:18169616-18169635 None:intergenic 25.0%
!!! CCATTTTTATATATGCATCA+AGG + chr1_4:18170054-18170073 None:intergenic 25.0%
! CCTTGATGCATATATAAAAA+TGG - chr1_4:18170051-18170070 Msa0153990:intron 25.0%
! TGTAATAAATTATATGGCTC+AGG + chr1_4:18170348-18170367 None:intergenic 25.0%
! AAAGAGTAAATGAACAAGTT+AGG + chr1_4:18170713-18170732 None:intergenic 25.0%
! CGATAATATGCATTAGAATT+TGG - chr1_4:18171029-18171048 Msa0153990:CDS 25.0%
! GTTATATTAGATGAGTCATA+AGG + chr1_4:18171563-18171582 None:intergenic 25.0%
! ATTCCGTACATGAATATATA+AGG + chr1_4:18171593-18171612 None:intergenic 25.0%
! CATATAAGGTTATAGATCAA+TGG - chr1_4:18171703-18171722 Msa0153990:intron 25.0%
! GAGAAATGAATATTTGTACT+AGG + chr1_4:18171855-18171874 None:intergenic 25.0%
! GTTGCTATAGCTATATATAT+TGG - chr1_4:18171947-18171966 Msa0153990:intron 25.0%
! CTAATAGTGGTATAGTAATT+TGG + chr1_4:18172171-18172190 None:intergenic 25.0%
!! AAGAATTAAACACCAACTTT+TGG + chr1_4:18172214-18172233 None:intergenic 25.0%
!!! AGTAATTGATTCGTTAAACT+TGG + chr1_4:18172279-18172298 None:intergenic 25.0%
!! TTTAACATCTCCAATTTTTG+TGG - chr1_4:18172524-18172543 Msa0153990:intron 25.0%
!! CAAACAATTTTGTTAAAGGT+AGG + chr1_4:18172837-18172856 None:intergenic 25.0%
! ATTCATTCAACTACAATACA+AGG + chr1_4:18173153-18173172 None:intergenic 25.0%
! TGAATATAGTGTATCTTTCT+TGG - chr1_4:18173168-18173187 Msa0153990:intron 25.0%
! TTGCTACTGACAAAAAAAAT+AGG - chr1_4:18173342-18173361 Msa0153990:intron 25.0%
! TTAACATTAAACCAAGACTT+TGG + chr1_4:18173379-18173398 None:intergenic 25.0%
! AGAAAAAAAATTAGGGTGAA+AGG + chr1_4:18173513-18173532 None:intergenic 25.0%
! ATATTTAAGCAAAATTTGCC+TGG - chr1_4:18173572-18173591 Msa0153990:CDS 25.0%
!!! TTGCTTTAAGATTAGGTTTT+AGG - chr1_4:18173676-18173695 Msa0153990:CDS 25.0%
! CATAGAAAATATAGATGAGA+GGG + chr1_4:18173960-18173979 None:intergenic 25.0%
! TCATAGAAAATATAGATGAG+AGG + chr1_4:18173961-18173980 None:intergenic 25.0%
!! TCTCATCTATATTTTCTATG+AGG - chr1_4:18173960-18173979 Msa0153990:intron 25.0%
!! TCTATATTTTCTATGAGGAT+TGG - chr1_4:18173965-18173984 Msa0153990:intron 25.0%
! TTGGATTCATAACAAATTGT+GGG + chr1_4:18174137-18174156 None:intergenic 25.0%
!!! ATCTACAAAAGAAAGTGTTA+GGG + chr1_4:18174166-18174185 None:intergenic 25.0%
!!! TATCTACAAAAGAAAGTGTT+AGG + chr1_4:18174167-18174186 None:intergenic 25.0%
! ATTGTTACATATATGGAGAT+AGG + chr1_4:18174320-18174339 None:intergenic 25.0%
! TGTCTCAATTGTTACATATA+TGG + chr1_4:18174327-18174346 None:intergenic 25.0%
!! AGCCTTATCAAAATAATGAA+AGG - chr1_4:18174346-18174365 Msa0153990:intron 25.0%
! ATAATAGTCAAAGAATAGAG+GGG + chr1_4:18174558-18174577 None:intergenic 25.0%
! AAGTTATAACATGGAAAAGA+GGG + chr1_4:18174741-18174760 None:intergenic 25.0%
! TAAGTTATAACATGGAAAAG+AGG + chr1_4:18174742-18174761 None:intergenic 25.0%
!! TTTCTTTCTTAGATTTTCTC+CGG + chr1_4:18174880-18174899 None:intergenic 25.0%
! TTATCCATTCAAAATACAAG+AGG - chr1_4:18175106-18175125 Msa0153990:CDS 25.0%
!!! TTCTTTAGAGTTATCTTTAC+TGG + chr1_4:18175309-18175328 None:intergenic 25.0%
TTAGGAAAATGTTTCATAGG+TGG + chr1_4:18166903-18166922 None:intergenic 30.0%
TGCTTAGGAAAATGTTTCAT+AGG + chr1_4:18166906-18166925 None:intergenic 30.0%
CTGAGAAATATGTACTATAC+AGG + chr1_4:18166940-18166959 None:intergenic 30.0%
TAGCTATTTATAGAGGGAAA+GGG + chr1_4:18167069-18167088 None:intergenic 30.0%
TTAGCTATTTATAGAGGGAA+AGG + chr1_4:18167070-18167089 None:intergenic 30.0%
GTTGTGTTAGCTATTTATAG+AGG + chr1_4:18167076-18167095 None:intergenic 30.0%
CAAAACAATAAGGTGAAAGA+TGG + chr1_4:18167101-18167120 None:intergenic 30.0%
GTTGAGTGTACAAAACAATA+AGG + chr1_4:18167111-18167130 None:intergenic 30.0%
AGAGGAGCAATATAATGAAA+GGG + chr1_4:18167194-18167213 None:intergenic 30.0%
AAGAGGAGCAATATAATGAA+AGG + chr1_4:18167195-18167214 None:intergenic 30.0%
AAGGAAGGATAGTAAAAAAG+AGG + chr1_4:18167212-18167231 None:intergenic 30.0%
AACATTTGTCTTTGTCTCTA+TGG + chr1_4:18167254-18167273 None:intergenic 30.0%
!! GTTTTGAGTATAGAGTTTGA+GGG + chr1_4:18167316-18167335 None:intergenic 30.0%
TTGTGGAGAAGAAAGAATTT+GGG + chr1_4:18167338-18167357 None:intergenic 30.0%
ATATTCAAGACACACATACT+AGG - chr1_4:18167682-18167701 Msa0153990:intron 30.0%
!!! ACAGAATTTTTAAGTGTGGA+AGG + chr1_4:18167889-18167908 None:intergenic 30.0%
!!! AGAGACAGAATTTTTAAGTG+TGG + chr1_4:18167893-18167912 None:intergenic 30.0%
GGACCAAATTGTACAAAAAT+TGG - chr1_4:18167918-18167937 Msa0153990:intron 30.0%
! TACAAAAATTGGTTCCAACT+TGG - chr1_4:18167929-18167948 Msa0153990:intron 30.0%
! ACAAAAATTGGTTCCAACTT+GGG - chr1_4:18167930-18167949 Msa0153990:intron 30.0%
AAGAGAATTGTATCATTGCT+TGG - chr1_4:18168167-18168186 Msa0153990:intron 30.0%
GAAGTTCCATGAAGATTTAA+AGG + chr1_4:18168213-18168232 None:intergenic 30.0%
ATCTTCATGGAACTTCTTAT+TGG - chr1_4:18168217-18168236 Msa0153990:intron 30.0%
CCAATTAAACCATGATTTAG+AGG + chr1_4:18168385-18168404 None:intergenic 30.0%
CCTCTAAATCATGGTTTAAT+TGG - chr1_4:18168382-18168401 Msa0153990:intron 30.0%
GAATTGACATGTTCAACAAT+TGG + chr1_4:18168544-18168563 None:intergenic 30.0%
AATGAATATTGATGAAGGCA+AGG - chr1_4:18168678-18168697 Msa0153990:intron 30.0%
!!! AGGTTTTGAATGAGAGTATA+AGG - chr1_4:18168702-18168721 Msa0153990:intron 30.0%
!! TTTTGAATGAGAGTATAAGG+AGG - chr1_4:18168705-18168724 Msa0153990:intron 30.0%
! TTTGAATGAGAGTATAAGGA+GGG - chr1_4:18168706-18168725 Msa0153990:intron 30.0%
AAAGAGTAGTGATGTTTGAA+CGG - chr1_4:18169007-18169026 Msa0153990:intron 30.0%
! ATGGAGTAGTGGAAAATAAA+TGG - chr1_4:18169116-18169135 Msa0153990:intron 30.0%
TCAAATGGTTGTTCAAACAT+GGG + chr1_4:18169177-18169196 None:intergenic 30.0%
TCATCAAAAGTTGTCTCAAA+TGG + chr1_4:18169192-18169211 None:intergenic 30.0%
AAAAAGATAGTGCACTTTCA+AGG - chr1_4:18169356-18169375 Msa0153990:intron 30.0%
ATACAGAAATATAGTGGTCA+AGG + chr1_4:18169409-18169428 None:intergenic 30.0%
! AAATAAGAAGCAAACTTGCT+AGG - chr1_4:18169805-18169824 Msa0153990:intron 30.0%
!! AATAAGAAGCAAACTTGCTA+GGG - chr1_4:18169806-18169825 Msa0153990:intron 30.0%
AGGGTATGAGTATAATTGTT+GGG + chr1_4:18170800-18170819 None:intergenic 30.0%
! AAGGGTATGAGTATAATTGT+TGG + chr1_4:18170801-18170820 None:intergenic 30.0%
CATACCCTTACAAATAATTG+AGG - chr1_4:18170812-18170831 Msa0153990:intron 30.0%
TTGTTTCGTAAGATTGAGTT+AGG + chr1_4:18171192-18171211 None:intergenic 30.0%
CACTAACAACCAAGTAAAAT+GGG - chr1_4:18171333-18171352 Msa0153990:intron 30.0%
TTCTTACCTCAAATCTTGAA+GGG + chr1_4:18171535-18171554 None:intergenic 30.0%
ATTCTTACCTCAAATCTTGA+AGG + chr1_4:18171536-18171555 None:intergenic 30.0%
TCCTTTGTCAGAAACATATA+AGG - chr1_4:18171689-18171708 Msa0153990:intron 30.0%
! ACCTTATATGTTTCTGACAA+AGG + chr1_4:18171693-18171712 None:intergenic 30.0%
AACATTGAATCACCTATCTA+GGG + chr1_4:18171782-18171801 None:intergenic 30.0%
AAACATTGAATCACCTATCT+AGG + chr1_4:18171783-18171802 None:intergenic 30.0%
ACCAATACCATTAAGACATT+AGG - chr1_4:18171973-18171992 Msa0153990:intron 30.0%
CCAATACCATTAAGACATTA+GGG - chr1_4:18171974-18171993 Msa0153990:intron 30.0%
! GACTTAATTGGTTTATGTGA+TGG - chr1_4:18171999-18172018 Msa0153990:intron 30.0%
! ACATATATGCCATTTGGAAA+TGG - chr1_4:18172045-18172064 Msa0153990:intron 30.0%
!!! GTCTCAAACTATTTTTGAGT+TGG - chr1_4:18172306-18172325 Msa0153990:intron 30.0%
GTTGAGATATCCACAAAAAT+TGG + chr1_4:18172537-18172556 None:intergenic 30.0%
TTTCATCATCGTTTACTTTC+TGG + chr1_4:18172616-18172635 None:intergenic 30.0%
! CTTATCTCTCAAGCTTTTAT+TGG - chr1_4:18172650-18172669 Msa0153990:CDS 30.0%
AGGGATTTATTAAACTGTTG+AGG + chr1_4:18172695-18172714 None:intergenic 30.0%
! TACTAATTGTATTGGTGTAG+TGG + chr1_4:18172719-18172738 None:intergenic 30.0%
CTTAAGCTAAATCACTTGAT+TGG + chr1_4:18172868-18172887 None:intergenic 30.0%
!!! TTCACGAACGATTTGTTTTA+AGG + chr1_4:18172904-18172923 None:intergenic 30.0%
CGTTCGTGAAAACTTTAATT+TGG - chr1_4:18172914-18172933 Msa0153990:intron 30.0%
!! TCGTGAAAACTTTAATTTGG+TGG - chr1_4:18172917-18172936 Msa0153990:intron 30.0%
!! AAAATTAGTTTGTCTCCTAG+TGG - chr1_4:18173014-18173033 Msa0153990:intron 30.0%
!! AAATTAGTTTGTCTCCTAGT+GGG - chr1_4:18173015-18173034 Msa0153990:intron 30.0%
ATTCAACTACAATACAAGGA+AGG + chr1_4:18173149-18173168 None:intergenic 30.0%
AAGAAAATAGTGTGTAGAGT+CGG - chr1_4:18173218-18173237 Msa0153990:intron 30.0%
GAAATACATGATCATTGATG+AGG + chr1_4:18173246-18173265 None:intergenic 30.0%
! AAGGTCTCTTTTACTTTGAT+AGG - chr1_4:18173480-18173499 Msa0153990:intron 30.0%
! AGGTCTCTTTTACTTTGATA+GGG - chr1_4:18173481-18173500 Msa0153990:intron 30.0%
! TAATAAGAACAAGTTGAACC+AGG + chr1_4:18173593-18173612 None:intergenic 30.0%
AATCTTAAAGCAAAGAACAC+TGG + chr1_4:18173669-18173688 None:intergenic 30.0%
!! GTGTTCTTTGCTTTAAGATT+AGG - chr1_4:18173669-18173688 Msa0153990:CDS 30.0%
TTAGTTAAGTGGCTACAAAA+AGG + chr1_4:18173808-18173827 None:intergenic 30.0%
! TTTGAGTTCACAAGCAAATT+TGG - chr1_4:18173901-18173920 Msa0153990:intron 30.0%
CTTGGATTCATAACAAATTG+TGG + chr1_4:18174138-18174157 None:intergenic 30.0%
!! TCTACAAAAGAAAGTGTTAG+GGG + chr1_4:18174165-18174184 None:intergenic 30.0%
AATAATGAAAGGAATGCTTG+TGG - chr1_4:18174357-18174376 Msa0153990:intron 30.0%
TGCAATTGCAAAATACCAAT+AGG + chr1_4:18174595-18174614 None:intergenic 30.0%
AACCATTCAAATGCTTGAAA+TGG + chr1_4:18174704-18174723 None:intergenic 30.0%
ATTAGTATAGTATGAGACAG+AGG - chr1_4:18175074-18175093 Msa0153990:intron 30.0%
AATGGAGATGGAATTCAATA+TGG - chr1_4:18175255-18175274 Msa0153990:CDS 30.0%
! TTTACTGGTAATCCATGTTT+TGG + chr1_4:18175294-18175313 None:intergenic 30.0%
! GAGATTCTTTTCCCATTTAT+AGG - chr1_4:18175433-18175452 Msa0153990:five_prime_UTR 30.0%
ATGTTTCATAGGTGGCAAAA+GGG + chr1_4:18166895-18166914 None:intergenic 35.0%
AATGTTTCATAGGTGGCAAA+AGG + chr1_4:18166896-18166915 None:intergenic 35.0%
! TAGTGAAAATTAAGGGGTGT+CGG + chr1_4:18166973-18166992 None:intergenic 35.0%
AACAATAAGGTGAAAGATGG+CGG + chr1_4:18167098-18167117 None:intergenic 35.0%
AAGTGATGTGAAGAATTGCA+TGG + chr1_4:18167145-18167164 None:intergenic 35.0%
!!! GGTTTTGAGTATAGAGTTTG+AGG + chr1_4:18167317-18167336 None:intergenic 35.0%
CTTGTGGAGAAGAAAGAATT+TGG + chr1_4:18167339-18167358 None:intergenic 35.0%
CAAATTCTTTCTTCTCCACA+AGG - chr1_4:18167337-18167356 Msa0153990:intron 35.0%
! TTAATACCTTTTCTGCCTTG+TGG + chr1_4:18167355-18167374 None:intergenic 35.0%
AGTATGTATCTCTCGTTTCA+TGG - chr1_4:18167431-18167450 Msa0153990:intron 35.0%
!! ATTTACGTGGTTCTAAGTTG+CGG - chr1_4:18167482-18167501 Msa0153990:intron 35.0%
TGTTGAAAGAACAAAGCTTC+TGG + chr1_4:18167817-18167836 None:intergenic 35.0%
!! GAAGCTTTGTTCTTTCAACA+AGG - chr1_4:18167817-18167836 Msa0153990:intron 35.0%
AAGTGTGGAAGGTAAAAAAG+AGG + chr1_4:18167878-18167897 None:intergenic 35.0%
!! AACCTTTTTCATCTCTTGCA+AGG + chr1_4:18167974-18167993 None:intergenic 35.0%
ATTGTATCATTGCTTGGAGA+AGG - chr1_4:18168173-18168192 Msa0153990:intron 35.0%
TTGTATCATTGCTTGGAGAA+GGG - chr1_4:18168174-18168193 Msa0153990:intron 35.0%
TCATGGAACTTCTTATTGGA+AGG - chr1_4:18168221-18168240 Msa0153990:intron 35.0%
!! TTCTTATTGGAAGGCATTGA+AGG - chr1_4:18168230-18168249 Msa0153990:intron 35.0%
AAAACTAATTGAACCAACCG+CGG - chr1_4:18168457-18168476 Msa0153990:intron 35.0%
!!! GTTTTAAAAACCGAATCGGA+CGG + chr1_4:18168578-18168597 None:intergenic 35.0%
AATATTGATGAAGGCAAGGA+AGG - chr1_4:18168682-18168701 Msa0153990:intron 35.0%
GAGGGTAATAGAAAGAAGAA+AGG - chr1_4:18168724-18168743 Msa0153990:intron 35.0%
AAGAGTAGTGATGTTTGAAC+GGG - chr1_4:18169008-18169027 Msa0153990:intron 35.0%
TCTCTCCATTGAAAATTCAC+CGG + chr1_4:18169046-18169065 None:intergenic 35.0%
! TATTTTCCACTACTCCATGT+GGG + chr1_4:18169114-18169133 None:intergenic 35.0%
! TTATTTTCCACTACTCCATG+TGG + chr1_4:18169115-18169134 None:intergenic 35.0%
CTCAAATGGTTGTTCAAACA+TGG + chr1_4:18169178-18169197 None:intergenic 35.0%
ACAATGGAGAGAGAAAAATG+AGG - chr1_4:18169246-18169265 Msa0153990:intron 35.0%
AAATGAGGAGAGAGAATAAG+AGG - chr1_4:18169261-18169280 Msa0153990:intron 35.0%
GGTAAATAAGTGAGTGTATG+AGG - chr1_4:18169377-18169396 Msa0153990:intron 35.0%
! TATTTTACCCTGCTTGTGAA+GGG + chr1_4:18169870-18169889 None:intergenic 35.0%
!! TTATTTTACCCTGCTTGTGA+AGG + chr1_4:18169871-18169890 None:intergenic 35.0%
!! ATCATTAACTTGTGCCTTGA+GGG + chr1_4:18170114-18170133 None:intergenic 35.0%
!! AATCATTAACTTGTGCCTTG+AGG + chr1_4:18170115-18170134 None:intergenic 35.0%
TTTCTTAACATGTGCCCTAA+GGG - chr1_4:18170237-18170256 Msa0153990:intron 35.0%
AGTGTTAACTTATGCCCTTA+GGG + chr1_4:18170254-18170273 None:intergenic 35.0%
TAGTGTTAACTTATGCCCTT+AGG + chr1_4:18170255-18170274 None:intergenic 35.0%
! AGCCTCCAATTTTATTGGAA+CGG + chr1_4:18170555-18170574 None:intergenic 35.0%
TTCCAATAAAATTGGAGGCT+CGG - chr1_4:18170555-18170574 Msa0153990:intron 35.0%
GAGTATAATTGTTGGGATGT+AGG + chr1_4:18170793-18170812 None:intergenic 35.0%
GTGGCCTCAATTATTTGTAA+GGG + chr1_4:18170819-18170838 None:intergenic 35.0%
TAATTGAGGCCACCATAAAT+TGG - chr1_4:18170826-18170845 Msa0153990:intron 35.0%
! AATCTTGTACATTGGCTAAG+AGG - chr1_4:18170985-18171004 Msa0153990:CDS 35.0%
CAAAATTTACCAGTGATGAG+AGG - chr1_4:18171066-18171085 Msa0153990:CDS 35.0%
CAAAATCCGTTAGATCATCA+TGG + chr1_4:18171132-18171151 None:intergenic 35.0%
GCACTAACAACCAAGTAAAA+TGG - chr1_4:18171332-18171351 Msa0153990:intron 35.0%
AACCAAGTAAAATGGGAATC+AGG - chr1_4:18171340-18171359 Msa0153990:intron 35.0%
! TACCTGATTCCCATTTTACT+TGG + chr1_4:18171345-18171364 None:intergenic 35.0%
TTGCACTTCTTAATGTCTCT+TGG + chr1_4:18171370-18171389 None:intergenic 35.0%
! TGATGAATGCTTCTAAAGAG+TGG + chr1_4:18171476-18171495 None:intergenic 35.0%
! ATTTTCATGTAGCTACCAAG+AGG - chr1_4:18171654-18171673 Msa0153990:intron 35.0%
! TTTTCATGTAGCTACCAAGA+GGG - chr1_4:18171655-18171674 Msa0153990:intron 35.0%
GGATAAAATATAACCCCTCT+TGG + chr1_4:18171672-18171691 None:intergenic 35.0%
ATATGAATCTTCCCCTAGAT+AGG - chr1_4:18171767-18171786 Msa0153990:intron 35.0%
ACATTGAATCACCTATCTAG+GGG + chr1_4:18171781-18171800 None:intergenic 35.0%
CCCTAATGTCTTAATGGTAT+TGG + chr1_4:18171977-18171996 None:intergenic 35.0%
AGTCAACCCTAATGTCTTAA+TGG + chr1_4:18171983-18172002 None:intergenic 35.0%
! GACATTAGGGTTGACTTAAT+TGG - chr1_4:18171987-18172006 Msa0153990:intron 35.0%
CCAAATGGCATATATGTGTT+TGG + chr1_4:18172042-18172061 None:intergenic 35.0%
CCAAACACATATATGCCATT+TGG - chr1_4:18172039-18172058 Msa0153990:intron 35.0%
! GTGGTATAGTAATTTGGTGA+GGG + chr1_4:18172165-18172184 None:intergenic 35.0%
! AGTGGTATAGTAATTTGGTG+AGG + chr1_4:18172166-18172185 None:intergenic 35.0%
! AGTTGGTTCAGTTCATTATC+AGG - chr1_4:18172323-18172342 Msa0153990:intron 35.0%
!! AGCAAGTGATTTGGTTTAAG+TGG - chr1_4:18172371-18172390 Msa0153990:intron 35.0%
!! CAAGCTTTTATTGGTAGTCA+TGG - chr1_4:18172659-18172678 Msa0153990:intron 35.0%
! ATTGTATTGGTGTAGTGGAA+GGG + chr1_4:18172714-18172733 None:intergenic 35.0%
! AATTGTATTGGTGTAGTGGA+AGG + chr1_4:18172715-18172734 None:intergenic 35.0%
!! AATTAGTTTGTCTCCTAGTG+GGG - chr1_4:18173016-18173035 Msa0153990:intron 35.0%
AGAAAATAGTGTGTAGAGTC+GGG - chr1_4:18173219-18173238 Msa0153990:intron 35.0%
ATTTCATACATACGTGTACG+TGG - chr1_4:18173261-18173280 Msa0153990:intron 35.0%
TGATGTGTTAAGGAAACGTT+TGG + chr1_4:18173309-18173328 None:intergenic 35.0%
ACATGTGCAATGATGTGTTA+AGG + chr1_4:18173319-18173338 None:intergenic 35.0%
CCACTTAACTAATGAACCAA+CGG - chr1_4:18173816-18173835 Msa0153990:intron 35.0%
!!! GTGAGGTTTTGAGTTATTCT+GGG + chr1_4:18173927-18173946 None:intergenic 35.0%
!!! TGTGAGGTTTTGAGTTATTC+TGG + chr1_4:18173928-18173947 None:intergenic 35.0%
! GTTGTTGGATCGATTTCAAA+TGG + chr1_4:18174106-18174125 None:intergenic 35.0%
TAACAAATTGTGGGTAACTG+TGG + chr1_4:18174128-18174147 None:intergenic 35.0%
TTGACTATACACTAGCATCA+TGG + chr1_4:18174397-18174416 None:intergenic 35.0%
TGTTACAAAGTTGTGTGGTA+AGG + chr1_4:18174496-18174515 None:intergenic 35.0%
CACCATTTCAAGCATTTGAA+TGG - chr1_4:18174699-18174718 Msa0153990:CDS 35.0%
GGAAAAGAGGGATAGAAATT+TGG + chr1_4:18174729-18174748 None:intergenic 35.0%
TAACCAAAACTTAGTCTCTC+CGG - chr1_4:18174842-18174861 Msa0153990:intron 35.0%
!! GACACCTCTTGTATTTTGAA+TGG + chr1_4:18175113-18175132 None:intergenic 35.0%
!! TGAACTCATCCATGTTTTGA+TGG - chr1_4:18175205-18175224 Msa0153990:CDS 35.0%
AAAGCAACACCATCAAAACA+TGG + chr1_4:18175217-18175236 None:intergenic 35.0%
!!! TGTTTTGATGGTGTTGCTTT+AGG - chr1_4:18175217-18175236 Msa0153990:CDS 35.0%
TTCAGAAAATGAGAGCAAAG+TGG - chr1_4:18175342-18175361 Msa0153990:five_prime_UTR 35.0%
TCAGAAAATGAGAGCAAAGT+GGG - chr1_4:18175343-18175362 Msa0153990:five_prime_UTR 35.0%
CATGCAATTTGTAGCATGTT+AGG - chr1_4:18175368-18175387 Msa0153990:five_prime_UTR 35.0%
!!! GGAACTAGTTTTGTCTCATT+GGG + chr1_4:18175459-18175478 None:intergenic 35.0%
CTATCCTTCCTTTCCTTCAA+TGG - chr1_4:18167220-18167239 Msa0153990:intron 40.0%
TGTTTCCACCATTGAAGGAA+AGG + chr1_4:18167231-18167250 None:intergenic 40.0%
TATGGTGTTTCCACCATTGA+AGG + chr1_4:18167236-18167255 None:intergenic 40.0%
AAAGACAAATGTTTACCCCC+TGG - chr1_4:18167261-18167280 Msa0153990:intron 40.0%
GTAGTAAAATATGGCCGATG+TGG - chr1_4:18167533-18167552 Msa0153990:intron 40.0%
TACTGCAATTTCGACCACAT+CGG + chr1_4:18167550-18167569 None:intergenic 40.0%
GGACTTGATATCATCACACA+AGG + chr1_4:18167712-18167731 None:intergenic 40.0%
TGTGATGATATCAAGTCCTG+AGG - chr1_4:18167714-18167733 Msa0153990:intron 40.0%
TCATCTTCTCTTTGCTTGGA+GGG + chr1_4:18167789-18167808 None:intergenic 40.0%
ATCATCTTCTCTTTGCTTGG+AGG + chr1_4:18167790-18167809 None:intergenic 40.0%
CCTATCATCTTCTCTTTGCT+TGG + chr1_4:18167793-18167812 None:intergenic 40.0%
CCAAGCAAAGAGAAGATGAT+AGG - chr1_4:18167790-18167809 Msa0153990:intron 40.0%
! TTGAACTAGCTTCTTGAGCA+TGG + chr1_4:18167854-18167873 None:intergenic 40.0%
! ATGGTTCTATTTGCCCAAGT+TGG + chr1_4:18167946-18167965 None:intergenic 40.0%
CACCTTGCAAGAGATGAAAA+AGG - chr1_4:18167969-18167988 Msa0153990:intron 40.0%
TCGTTGAGACCTCTAAATCA+TGG - chr1_4:18168373-18168392 Msa0153990:intron 40.0%
TAGAAAGAAGAAAGGAGAGC+AGG - chr1_4:18168732-18168751 Msa0153990:intron 40.0%
AGAAAGGAGAGCAGGAATTA+TGG - chr1_4:18168740-18168759 Msa0153990:intron 40.0%
!! AATTATGGTGGTGGGTTGTT+GGG - chr1_4:18168755-18168774 Msa0153990:intron 40.0%
TTGTTGGGAATTCTGTTGAG+TGG - chr1_4:18168770-18168789 Msa0153990:intron 40.0%
! GTACCAACTAACTGATTCTC+AGG - chr1_4:18168811-18168830 Msa0153990:intron 40.0%
CAGGTGGCTGATAATATCAT+TGG - chr1_4:18168830-18168849 Msa0153990:intron 40.0%
CACAGCTAGTGTTCTAACAT+GGG - chr1_4:18168877-18168896 Msa0153990:intron 40.0%
GCATGACAATGTCAATCTCT+TGG - chr1_4:18168913-18168932 Msa0153990:intron 40.0%
TCCATTGAAAATTCACCGGA+GGG + chr1_4:18169042-18169061 None:intergenic 40.0%
! ATTTTCCACTACTCCATGTG+GGG + chr1_4:18169113-18169132 None:intergenic 40.0%
CTTAGATCTCACTCAGTCAT+AGG - chr1_4:18169139-18169158 Msa0153990:intron 40.0%
TTGGTCAGTGTCAAATCTGT+TGG + chr1_4:18169998-18170017 None:intergenic 40.0%
!! AATGTTAACTTGCACCCTCA+AGG - chr1_4:18170097-18170116 Msa0153990:intron 40.0%
CTTTCTTAACATGTGCCCTA+AGG - chr1_4:18170236-18170255 Msa0153990:intron 40.0%
GGTGGCCTCAATTATTTGTA+AGG + chr1_4:18170820-18170839 None:intergenic 40.0%
TTATCATCAGAGCCATTCCT+TGG + chr1_4:18170883-18170902 None:intergenic 40.0%
! TGGTATCCGGTTTTCACTAT+CGG + chr1_4:18171112-18171131 None:intergenic 40.0%
CGTTAGATCATCATGGTATC+CGG + chr1_4:18171125-18171144 None:intergenic 40.0%
CGGATACCATGATGATCTAA+CGG - chr1_4:18171123-18171142 Msa0153990:intron 40.0%
TAGAGAAGCAGTTAGAGATG+TGG - chr1_4:18171409-18171428 Msa0153990:intron 40.0%
CAAGGTTACTCCATTCCAAA+AGG - chr1_4:18171437-18171456 Msa0153990:intron 40.0%
GTTACTCCATTCCAAAAGGT+TGG - chr1_4:18171441-18171460 Msa0153990:intron 40.0%
!! GACTTTCCAACCTTTTGGAA+TGG + chr1_4:18171450-18171469 None:intergenic 40.0%
! GAATGCTTCTAAAGAGTGGA+AGG + chr1_4:18171472-18171491 None:intergenic 40.0%
GTTTGACCCTTCAAGATTTG+AGG - chr1_4:18171526-18171545 Msa0153990:intron 40.0%
TTTCATGTAGCTACCAAGAG+GGG - chr1_4:18171656-18171675 Msa0153990:intron 40.0%
ATATATGTGTTTGGTCGAGG+TGG + chr1_4:18172033-18172052 None:intergenic 40.0%
AACCAAACGAATCGAACTTG+AGG + chr1_4:18172250-18172269 None:intergenic 40.0%
GGATAGTGTTCCTTAAGATG+TGG - chr1_4:18173116-18173135 Msa0153990:intron 40.0%
TGTTCCTTAAGATGTGGAAG+TGG - chr1_4:18173122-18173141 Msa0153990:intron 40.0%
CGTATAGATCTCCAAAGTCT+TGG - chr1_4:18173365-18173384 Msa0153990:intron 40.0%
AAGACGGTCTTAAATTCGAG+AGG - chr1_4:18173400-18173419 Msa0153990:intron 40.0%
TGGAAATAGACACACGCATA+TGG - chr1_4:18173628-18173647 Msa0153990:CDS 40.0%
!! CCGTTGGTTCATTAGTTAAG+TGG + chr1_4:18173819-18173838 None:intergenic 40.0%
ACTCAAAACCTCACACTAGT+AGG - chr1_4:18173933-18173952 Msa0153990:intron 40.0%
!!! TTTTCTATGAGGATTGGCTG+CGG - chr1_4:18173971-18173990 Msa0153990:intron 40.0%
! TGGTGTCGAGTTAAACTTGT+TGG + chr1_4:18174428-18174447 None:intergenic 40.0%
AAAGTTGTGTGGTAAGGACA+TGG + chr1_4:18174490-18174509 None:intergenic 40.0%
CCTTGTGTTACAAAGTTGTG+TGG + chr1_4:18174501-18174520 None:intergenic 40.0%
CCACACAACTTTGTAACACA+AGG - chr1_4:18174498-18174517 Msa0153990:CDS 40.0%
!! TTTGATGGTGTTGCTTTAGG+TGG - chr1_4:18175220-18175239 Msa0153990:CDS 40.0%
CAGAAAATGAGAGCAAAGTG+GGG - chr1_4:18175344-18175363 Msa0153990:five_prime_UTR 40.0%
GTCTCATTGGGCCTATAAAT+GGG + chr1_4:18175447-18175466 None:intergenic 40.0%
TGTCTCATTGGGCCTATAAA+TGG + chr1_4:18175448-18175467 None:intergenic 40.0%
!!! GGGAACTAGTTTTGTCTCAT+TGG + chr1_4:18175460-18175479 None:intergenic 40.0%
GAGACAAAACTAGTTCCCAT+TGG - chr1_4:18175462-18175481 Msa0153990:five_prime_UTR 40.0%
ACAAAACTAGTTCCCATTGG+CGG - chr1_4:18175465-18175484 Msa0153990:five_prime_UTR 40.0%
ATAGGTGGCAAAAGGGAGTT+GGG + chr1_4:18166888-18166907 None:intergenic 45.0%
GAGGGAAAGGGAATGAGAAT+TGG + chr1_4:18167057-18167076 None:intergenic 45.0%
TCCTTCCTTTCCTTCAATGG+TGG - chr1_4:18167223-18167242 Msa0153990:intron 45.0%
TCCACCATTGAAGGAAAGGA+AGG + chr1_4:18167227-18167246 None:intergenic 45.0%
ATGTTTACCCCCTGGTTCAA+TGG - chr1_4:18167269-18167288 Msa0153990:intron 45.0%
TGTTTACCCCCTGGTTCAAT+GGG - chr1_4:18167270-18167289 Msa0153990:intron 45.0%
TTGAGGGTCTCTCCAAAGTA+AGG + chr1_4:18167300-18167319 None:intergenic 45.0%
TCTTCTCCACAAGGCAGAAA+AGG - chr1_4:18167346-18167365 Msa0153990:intron 45.0%
! TCTTTGCTTGGAGGGTATGT+TGG + chr1_4:18167781-18167800 None:intergenic 45.0%
!! CATCTCTTGCAAGGTGTTGA+TGG + chr1_4:18167965-18167984 None:intergenic 45.0%
! GTGGCTGCAAATTCAGCTTT+TGG - chr1_4:18168114-18168133 Msa0153990:intron 45.0%
! GAGTTGAACTAGTCTAACCG+CGG + chr1_4:18168477-18168496 None:intergenic 45.0%
! GCGGTTAGACTAGTTCAACT+CGG - chr1_4:18168476-18168495 Msa0153990:intron 45.0%
AAGGAGAGCAGGAATTATGG+TGG - chr1_4:18168743-18168762 Msa0153990:intron 45.0%
AGAGCAGGAATTATGGTGGT+GGG - chr1_4:18168747-18168766 Msa0153990:intron 45.0%
!! GAATTATGGTGGTGGGTTGT+TGG - chr1_4:18168754-18168773 Msa0153990:intron 45.0%
CCACCTGAGAATCAGTTAGT+TGG + chr1_4:18168817-18168836 None:intergenic 45.0%
! CCAACTAACTGATTCTCAGG+TGG - chr1_4:18168814-18168833 Msa0153990:intron 45.0%
CCATGTTAGAACACTAGCTG+TGG + chr1_4:18168879-18168898 None:intergenic 45.0%
CCACAGCTAGTGTTCTAACA+TGG - chr1_4:18168876-18168895 Msa0153990:intron 45.0%
CCATTGAAAATTCACCGGAG+GGG + chr1_4:18169041-18169060 None:intergenic 45.0%
CTCCATTGAAAATTCACCGG+AGG + chr1_4:18169043-18169062 None:intergenic 45.0%
!! AAACTTGCTAGGGAAAGTCG+TGG - chr1_4:18169816-18169835 Msa0153990:intron 45.0%
GGAAAGTCGTGGACTTTCAT+GGG - chr1_4:18169827-18169846 Msa0153990:intron 45.0%
! CAATTTTATTGGAACGGCCC+TGG + chr1_4:18170549-18170568 None:intergenic 45.0%
CAGGGCCGTTCCAATAAAAT+TGG - chr1_4:18170547-18170566 Msa0153990:intron 45.0%
GGCCGTTCCAATAAAATTGG+AGG - chr1_4:18170550-18170569 Msa0153990:intron 45.0%
! AGCCGAGCCTCCAATTTTAT+TGG + chr1_4:18170560-18170579 None:intergenic 45.0%
TTGAGGCCACCATAAATTGG+AGG - chr1_4:18170829-18170848 Msa0153990:intron 45.0%
AGGAAAACTCCTCTCATCAC+TGG + chr1_4:18171078-18171097 None:intergenic 45.0%
! GAGGAGTTTTCCTACTAGTG+TGG - chr1_4:18171085-18171104 Msa0153990:CDS 45.0%
TGTGGTCCGATAGTGAAAAC+CGG - chr1_4:18171103-18171122 Msa0153990:intron 45.0%
! GGAAGGACTTTCCAACCTTT+TGG + chr1_4:18171455-18171474 None:intergenic 45.0%
TGTGGTTGAGGGAAGAAATG+AGG + chr1_4:18171503-18171522 None:intergenic 45.0%
GGTCAAACTTGTGTGGTTGA+GGG + chr1_4:18171514-18171533 None:intergenic 45.0%
CTTGAAGGGTCAAACTTGTG+TGG + chr1_4:18171521-18171540 None:intergenic 45.0%
GGCATATATGTGTTTGGTCG+AGG + chr1_4:18172036-18172055 None:intergenic 45.0%
! GAGTGGACTCCATTTCCAAA+TGG + chr1_4:18172057-18172076 None:intergenic 45.0%
!! TAGTGAGCTTGCTAAGCTTG+AGG - chr1_4:18172086-18172105 Msa0153990:intron 45.0%
ATGAAAGGGTGAGATGGTGA+AGG + chr1_4:18172122-18172141 None:intergenic 45.0%
ACCATCTCACCCTTTCATAC+AGG - chr1_4:18172124-18172143 Msa0153990:intron 45.0%
ACCTGTATGAAAGGGTGAGA+TGG + chr1_4:18172128-18172147 None:intergenic 45.0%
! CACCTCAAGTTCGATTCGTT+TGG - chr1_4:18172245-18172264 Msa0153990:intron 45.0%
AGGACCACTTCCACATCTTA+AGG + chr1_4:18173129-18173148 None:intergenic 45.0%
ATATCAGTGCGAAGTTCCGT+TGG + chr1_4:18173835-18173854 None:intergenic 45.0%
TTGTGGGTAACTGTGGTTGT+TGG + chr1_4:18174121-18174140 None:intergenic 45.0%
!! GAAAGTGTTAGGGGCAAACT+TGG + chr1_4:18174156-18174175 None:intergenic 45.0%
AAGGAATGCTTGTGGAACCA+AGG - chr1_4:18174365-18174384 Msa0153990:intron 45.0%
TAGCATCATGGAGTTTGCCT+TGG + chr1_4:18174385-18174404 None:intergenic 45.0%
TGATTGTGCAGAGCTACATG+TGG + chr1_4:18174448-18174467 None:intergenic 45.0%
GGACATGGTGAAATGTAGTG+TGG + chr1_4:18174475-18174494 None:intergenic 45.0%
! TTGCTTTAGGTGGCAAGTTG+TGG - chr1_4:18175230-18175249 Msa0153990:CDS 45.0%
! TGCTTTAGGTGGCAAGTTGT+GGG - chr1_4:18175231-18175250 Msa0153990:CDS 45.0%
CAAGTTGTGGGAAATGGAGA+TGG - chr1_4:18175243-18175262 Msa0153990:CDS 45.0%
!!! CCATGTTTTGGCACAGGAAA+AGG + chr1_4:18175282-18175301 None:intergenic 45.0%
! CCTTTTCCTGTGCCAAAACA+TGG - chr1_4:18175279-18175298 Msa0153990:CDS 45.0%
!!! GGTAATCCATGTTTTGGCAC+AGG + chr1_4:18175288-18175307 None:intergenic 45.0%
!!! TAAATATATTTTAGTAAAAT+TGG - chr1_4:18168511-18168530 Msa0153990:intron 5.0%
!!! AAATATATTTTAGTAAAATT+GGG - chr1_4:18168512-18168531 Msa0153990:intron 5.0%
!!! ATCATTAATTATTTTTATTA+GGG + chr1_4:18170600-18170619 None:intergenic 5.0%
!!! TATCATTAATTATTTTTATT+AGG + chr1_4:18170601-18170620 None:intergenic 5.0%
!!! TTTAAAATATTCTTTTAATT+TGG + chr1_4:18174670-18174689 None:intergenic 5.0%
CATAGGTGGCAAAAGGGAGT+TGG + chr1_4:18166889-18166908 None:intergenic 50.0%
!! TCAATGGGCTGGCCTTACTT+TGG - chr1_4:18167285-18167304 Msa0153990:intron 50.0%
! TGAACTAGTCTAACCGCGGT+TGG + chr1_4:18168473-18168492 None:intergenic 50.0%
ACTAGTTGAGCCGTCCGATT+CGG - chr1_4:18168565-18168584 Msa0153990:intron 50.0%
GAGAGCAGGAATTATGGTGG+TGG - chr1_4:18168746-18168765 Msa0153990:intron 50.0%
GGAATTCTGTTGAGTGGCAG+AGG - chr1_4:18168776-18168795 Msa0153990:intron 50.0%
! CCCCTCCGGTGAATTTTCAA+TGG - chr1_4:18169038-18169057 Msa0153990:intron 50.0%
TGTCAACTGAGCTATGCTCG+AGG - chr1_4:18169447-18169466 Msa0153990:intron 50.0%
GGGAAAGTCGTGGACTTTCA+TGG - chr1_4:18169826-18169845 Msa0153990:intron 50.0%
AAGTCGTGGACTTTCATGGG+AGG - chr1_4:18169830-18169849 Msa0153990:intron 50.0%
GACTTTCATGGGAGGATACC+AGG - chr1_4:18169838-18169857 Msa0153990:intron 50.0%
TATGGCTCAGGAGCTTAGCT+AGG + chr1_4:18170336-18170355 None:intergenic 50.0%
GCCACCATAAATTGGAGGCT+CGG - chr1_4:18170834-18170853 Msa0153990:intron 50.0%
GGCATGTGCAAGGAGTTCTA+CGG + chr1_4:18170862-18170881 None:intergenic 50.0%
AGAACTCCTTGCACATGCCA+AGG - chr1_4:18170863-18170882 Msa0153990:intron 50.0%
TCCTTGCACATGCCAAGGAA+TGG - chr1_4:18170868-18170887 Msa0153990:intron 50.0%
CACTATCGGACCACACTAGT+AGG + chr1_4:18171098-18171117 None:intergenic 50.0%
GTTAGAGATGTGGAGCTGCA+AGG - chr1_4:18171419-18171438 Msa0153990:intron 50.0%
GGGTCAAACTTGTGTGGTTG+AGG + chr1_4:18171515-18171534 None:intergenic 50.0%
AATGGAGTCCACTCTTGTCC+TGG - chr1_4:18172063-18172082 Msa0153990:intron 50.0%
AGCTTAGCAAGCTCACTACC+AGG + chr1_4:18172084-18172103 None:intergenic 50.0%
AAAGGGTGAGATGGTGAAGG+AGG + chr1_4:18172119-18172138 None:intergenic 50.0%
! GTGCCGGAGAGACTAAGTTT+TGG + chr1_4:18174848-18174867 None:intergenic 50.0%
AGGTGGCAAGTTGTGGGAAA+TGG - chr1_4:18175237-18175256 Msa0153990:CDS 50.0%
CCATGCATAATGCCGCCAAT+GGG + chr1_4:18175480-18175499 None:intergenic 50.0%
!! CAGGTGTGCTAGTGCTGCTT+AGG + chr1_4:18166921-18166940 None:intergenic 55.0%
!! TTAAGGGGTGTCGGTGTGTG+AGG + chr1_4:18166964-18166983 None:intergenic 55.0%
AAGGCCAGCCCATTGAACCA+GGG + chr1_4:18167281-18167300 None:intergenic 55.0%
TAAGGCCAGCCCATTGAACC+AGG + chr1_4:18167282-18167301 None:intergenic 55.0%
TCAATGTTGAGGGCCCCACA+TGG - chr1_4:18169097-18169116 Msa0153990:intron 55.0%
GCAGATGCCCTTCACAAGCA+GGG - chr1_4:18169860-18169879 Msa0153990:intron 55.0%
GCCGAGCCTCCAATTTATGG+TGG + chr1_4:18170838-18170857 None:intergenic 55.0%
GGAGCCGAGCCTCCAATTTA+TGG + chr1_4:18170841-18170860 None:intergenic 55.0%
GCCATTCCTTGGCATGTGCA+AGG + chr1_4:18170872-18170891 None:intergenic 55.0%
GCTCACTACCAGGACAAGAG+TGG + chr1_4:18172074-18172093 None:intergenic 55.0%
GAGTGTGACAGATCCCCACT+AGG + chr1_4:18173032-18173051 None:intergenic 55.0%
GGGGATCTGTCACACTCACT+TGG - chr1_4:18173035-18173054 Msa0153990:intron 55.0%
GAGAGGGTCCTACTAGTGTG+AGG + chr1_4:18173944-18173963 None:intergenic 55.0%
!! TCTCCGGCACAAGAAGTGTC+CGG - chr1_4:18174858-18174877 Msa0153990:intron 55.0%
TCTCCGGACACTTCTTGTGC+CGG + chr1_4:18174864-18174883 None:intergenic 55.0%
CCCATTGGCGGCATTATGCA+TGG - chr1_4:18175477-18175496 Msa0153990:five_prime_UTR 55.0%
GCCATGCATAATGCCGCCAA+TGG + chr1_4:18175481-18175500 None:intergenic 55.0%
TACCCCCTGGTTCAATGGGC+TGG - chr1_4:18167274-18167293 Msa0153990:intron 60.0%
AGGCCAGCCCATTGAACCAG+GGG + chr1_4:18167280-18167299 None:intergenic 60.0%
AGCACTGCTCTAGCTGCCTC+AGG + chr1_4:18167733-18167752 None:intergenic 60.0%
!! GCTTGTGAAGGGCATCTGCC+TGG + chr1_4:18169859-18169878 None:intergenic 60.0%
GGCAGATGCCCTTCACAAGC+AGG - chr1_4:18169859-18169878 Msa0153990:intron 60.0%
GGCCAGCCCATTGAACCAGG+GGG + chr1_4:18167279-18167298 None:intergenic 65.0%
GAACGGGTGCAGATCCCCTC+CGG - chr1_4:18169024-18169043 Msa0153990:intron 65.0%
GAGGGCCCCACATGGAGTAG+TGG - chr1_4:18169105-18169124 Msa0153990:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 18166864 18175602 18166864 ID=Msa0153990;Name=Msa0153990
chr1_4 mRNA 18166864 18175602 18166864 ID=Msa0153990-mRNA-1;Parent=Msa0153990;Name=Msa0153990-mRNA-1;_AED=0.16;_eAED=0.16;_QI=280|1|1|1|0.85|0.87|8|267|478
chr1_4 exon 18166864 18167227 18166864 ID=Msa0153990-mRNA-1:exon:6806;Parent=Msa0153990-mRNA-1
chr1_4 exon 18170321 18170439 18170321 ID=Msa0153990-mRNA-1:exon:6805;Parent=Msa0153990-mRNA-1
chr1_4 exon 18170919 18171104 18170919 ID=Msa0153990-mRNA-1:exon:6804;Parent=Msa0153990-mRNA-1
chr1_4 exon 18172585 18172674 18172585 ID=Msa0153990-mRNA-1:exon:6803;Parent=Msa0153990-mRNA-1
chr1_4 exon 18173520 18173771 18173520 ID=Msa0153990-mRNA-1:exon:6802;Parent=Msa0153990-mRNA-1
chr1_4 exon 18174215 18174364 18174215 ID=Msa0153990-mRNA-1:exon:6801;Parent=Msa0153990-mRNA-1
chr1_4 exon 18174476 18174794 18174476 ID=Msa0153990-mRNA-1:exon:6800;Parent=Msa0153990-mRNA-1
chr1_4 exon 18175099 18175602 18175099 ID=Msa0153990-mRNA-1:exon:6799;Parent=Msa0153990-mRNA-1
chr1_4 five_prime_UTR 18175323 18175602 18175323 ID=Msa0153990-mRNA-1:five_prime_utr;Parent=Msa0153990-mRNA-1
chr1_4 CDS 18175099 18175322 18175099 ID=Msa0153990-mRNA-1:cds;Parent=Msa0153990-mRNA-1
chr1_4 CDS 18174476 18174794 18174476 ID=Msa0153990-mRNA-1:cds;Parent=Msa0153990-mRNA-1
chr1_4 CDS 18174215 18174364 18174215 ID=Msa0153990-mRNA-1:cds;Parent=Msa0153990-mRNA-1
chr1_4 CDS 18173520 18173771 18173520 ID=Msa0153990-mRNA-1:cds;Parent=Msa0153990-mRNA-1
chr1_4 CDS 18172585 18172674 18172585 ID=Msa0153990-mRNA-1:cds;Parent=Msa0153990-mRNA-1
chr1_4 CDS 18170919 18171104 18170919 ID=Msa0153990-mRNA-1:cds;Parent=Msa0153990-mRNA-1
chr1_4 CDS 18170321 18170439 18170321 ID=Msa0153990-mRNA-1:cds;Parent=Msa0153990-mRNA-1
chr1_4 CDS 18167131 18167227 18167131 ID=Msa0153990-mRNA-1:cds;Parent=Msa0153990-mRNA-1
chr1_4 three_prime_UTR 18166864 18167130 18166864 ID=Msa0153990-mRNA-1:three_prime_utr;Parent=Msa0153990-mRNA-1
Gene Sequence

>Msa0153990

ATGCAATTCTTCACATCACTTGCTAATTCTTGTTTAGATTTTTCTCTCCCTTTCATTATATTGCTCCTCTTTTTTACTATCCTTCCTTTCCTTCAATGGTGGAAACACCATAGAGACAAAGACAAATGTTTACCCCCTGGTTCAATGGGCTGGCCTTACTTTGGAGAGACCCTCAAACTCTATACTCAAAACCCAAATTCTTTCTTCTCCACAAGGCAGAAAAGGTATGGAGATATATTCAAGACACACATACTAGGTTGTCCTTGTGTGATGATATCAAGTCCTGAGGCAGCTAGAGCAGTGCTTGTGACACAAGCACATCTTTTTAAACCAACATACCCTCCAAGCAAAGAGAAGATGATAGGACCAGAAGCTTTGTTCTTTCAACAAGGTTCTTATCACTCCATGCTCAAGAAGCTAGTTCAAGCCTCTTTTTTACCTTCCACACTTAAAAATTCTGTCTCTTATGTGGACCAAATTGTACAAAAATTGGTTCCAACTTGGGCAAATAGAACCATCAACACCTTGCAAGAGATGAAAAAGTATGCTTTTGAAGTGGCTGCAAATTCAGCTTTTGGTGAAATAAAAGAGATGGAAATGGAAGAAATAAGAGAATTGTATCATTGCTTGGAGAAGGGCTACAATTCTTATCCTTTAAATCTTCATGGAACTTCTTATTGGAAGGCATTGAAGGCAAGGAAGGTTTTGAATGAGAGTATAAGGAGGGTAATAGAAAGAAGAAAGGAGAGCAGGAATTATGGTGGTGGGTTGTTGGGAATTCTGTTGAGTGGCAGAGGTCATGAGAAGATGTACCAACTAACTGATTCTCAGGTGGCTGATAATATCATTGGTGTCATCTTTGCTGCACATGATACCACAGCTAGTGTTCTAACATGGGTTCTAAAGTACTTGCATGACAATGTCAATCTCTTGGAAACTGTCACAAAAGAACAAGAAGAAATAAGAAGCAAACTTGCTAGGGAAAGTCGTGGACTTTCATGGGAGGATACCAGGCAGATGCCCTTCACAAGCAGGGTAATCCAAGAGACATTAAGAAGTGCAAGCATATTATCATTCACATTTAGAGAAGCAGTTAGAGATGTGGAGCTGCAAGGTTACTCCATTCCAAAAGGTTGGAAAGTCCTTCCACTCTTTAGAAGCATTCATCACTCACCTCATTTCTTCCCTCAACCACACAAGTTTGACCCTTCAAGATTTGAGAATCCACCTCGACCAAACACATATATGCCATTTGGAAATGGAGTCCACTCTTGTCCTGGTAGTGAGCTTGCTAAGCTTGAGGTTCTTGTCCTCCTTCACCATCTCACCCTTTCATACAGGTGGCAAGTTGTGGGAAATGGAGATGGAATTCAATATGGTCCTTTTCCTGTGCCAAAACATGGATTACCAGTAAAGATAACTCTAAAGAAGAGTTAG
Protein sequence

>Msa0153990

MQFFTSLANSCLDFSLPFIILLLFFTILPFLQWWKHHRDKDKCLPPGSMGWPYFGETLKLYTQNPNSFFSTRQKRYGDIFKTHILGCPCVMISSPEAARAVLVTQAHLFKPTYPPSKEKMIGPEALFFQQGSYHSMLKKLVQASFLPSTLKNSVSYVDQIVQKLVPTWANRTINTLQEMKKYAFEVAANSAFGEIKEMEMEEIRELYHCLEKGYNSYPLNLHGTSYWKALKARKVLNESIRRVIERRKESRNYGGGLLGILLSGRGHEKMYQLTDSQVADNIIGVIFAAHDTTASVLTWVLKYLHDNVNLLETVTKEQEEIRSKLARESRGLSWEDTRQMPFTSRVIQETLRSASILSFTFREAVRDVELQGYSIPKGWKVLPLFRSIHHSPHFFPQPHKFDPSRFENPPRPNTYMPFGNGVHSCPGSELAKLEVLVLLHHLTLSYRWQVVGNGDGIQYGPFPVPKHGLPVKITLKKS*