Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0015410 | sp|Q179T2|MUT7_AEDAE | 27.907 | 215 | 133 | 8 | 2 | 203 | 420 | 625 | 2.50e-14 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015410 | Msa0160180 | 0.854610 | 1.097923e-61 | -8.615850e-47 |
| Msa0015410 | Msa0160280 | 0.874340 | 7.289634e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0015410 | MtrunA17_Chr1g0146721 | 97.461 | 512 | 13 | 0 | 1 | 512 | 1 | 512 | 0.0 | 1038 |
| Msa0015410 | MtrunA17_Chr1g0192551 | 34.831 | 178 | 94 | 5 | 26 | 200 | 366 | 524 | 1.02e-17 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0015410 | AT5G24340.1 | 61.840 | 511 | 178 | 5 | 9 | 512 | 5 | 505 | 0.0 | 618 |
| Msa0015410 | AT5G24340.2 | 61.179 | 492 | 174 | 5 | 9 | 493 | 5 | 486 | 0.0 | 581 |
| Msa0015410 | AT1G56310.2 | 34.426 | 183 | 98 | 5 | 21 | 200 | 367 | 530 | 1.78e-19 | 92.0 |
| Msa0015410 | AT1G56310.1 | 34.426 | 183 | 98 | 5 | 21 | 200 | 367 | 530 | 1.78e-19 | 92.0 |
Find 143 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGAATATTTAAGGTCTTTC+AGG | 0.172278 | 1_1:-24919569 | Msa0015410:CDS |
| TTGCTTGCTCGGAATATTTA+AGG | 0.172649 | 1_1:-24919578 | Msa0015410:CDS |
| TGGACTGTCACCAACTTTAT+TGG | 0.183295 | 1_1:-24917039 | Msa0015410:CDS |
| TGGACAGGTTGAACCGTATT+TGG | 0.193079 | 1_1:-24921597 | Msa0015410:intron |
| CCCTCCCTCTCTCTTCAATA+TGG | 0.225431 | 1_1:-24922648 | Msa0015410:CDS |
| AGTGGATTTCGAGAGGTTTC+TGG | 0.243426 | 1_1:+24922860 | None:intergenic |
| TTCTTGTTAAATAAGCAATT+TGG | 0.256042 | 1_1:+24917082 | None:intergenic |
| AAGAAGCAGTTGCCAATTAA+TGG | 0.266519 | 1_1:-24918400 | Msa0015410:CDS |
| GTTGGGGATTTCACTATCTA+AGG | 0.266528 | 1_1:-24921480 | Msa0015410:intron |
| ACTCAGCCATTGTTAGCTTT+TGG | 0.273099 | 1_1:-24916189 | Msa0015410:three_prime_UTR |
| TCTCTGGGAAGCCCATTAAT+TGG | 0.275370 | 1_1:+24918388 | None:intergenic |
| TTGGGTTGAAAGAGCTATTC+AGG | 0.279184 | 1_1:-24918666 | Msa0015410:CDS |
| TTAACAAGAATTTAGAGTTT+TGG | 0.282841 | 1_1:-24917069 | Msa0015410:CDS |
| TTCTTGTTCTGATGTTGTTC+AGG | 0.290742 | 1_1:-24918575 | Msa0015410:CDS |
| CGAACTTCTGTACTGCATTA+TGG | 0.303283 | 1_1:+24916693 | None:intergenic |
| CGCCGAGTTGACACGCGATT+TGG | 0.332673 | 1_1:+24922704 | None:intergenic |
| GAAGAGATGAATGAGGGTTT+TGG | 0.342950 | 1_1:+24922906 | None:intergenic |
| AATTGGGGAAAGATATTAAC+TGG | 0.343664 | 1_1:+24916127 | None:intergenic |
| ACTTCGAATGGATAATCTAT+TGG | 0.346561 | 1_1:+24918696 | None:intergenic |
| GGACTGTCACCAACTTTATT+GGG | 0.348017 | 1_1:-24917038 | Msa0015410:CDS |
| TTCAAAGACAATGTATTTAG+TGG | 0.361667 | 1_1:+24916415 | None:intergenic |
| TCCATTCGAAGTGCAAATCT+TGG | 0.365006 | 1_1:-24918685 | Msa0015410:CDS |
| GATCTTCGTTAATATTTAGT+TGG | 0.370178 | 1_1:+24917203 | None:intergenic |
| TCTGTACTGCATTATGGTAC+TGG | 0.375544 | 1_1:+24916699 | None:intergenic |
| AGAAGCAGTTGCCAATTAAT+GGG | 0.394347 | 1_1:-24918399 | Msa0015410:CDS |
| AGACGGTGGGGAATGAGTTT+TGG | 0.396979 | 1_1:+24922734 | None:intergenic |
| AATTCAAACCTTATCGAAAC+CGG | 0.401870 | 1_1:+24922516 | None:intergenic |
| CAAAACATTTACGTTGTGTT+GGG | 0.402928 | 1_1:-24917935 | Msa0015410:CDS |
| ACTATTTGTGGAGAATTGTT+GGG | 0.403644 | 1_1:-24921497 | Msa0015410:CDS |
| AAGAGTTTGTCAACTATTTG+TGG | 0.413650 | 1_1:-24921509 | Msa0015410:CDS |
| GTTAACTATAGGAGAAGAAA+TGG | 0.419067 | 1_1:+24922931 | None:intergenic |
| CACCTTGGGATCCAATAGTT+GGG | 0.419800 | 1_1:-24918327 | Msa0015410:CDS |
| AAGAGAGAGGGAGGGAGATA+AGG | 0.425681 | 1_1:+24922656 | None:intergenic |
| TTGTCAGAAAACATGGTGAT+AGG | 0.426512 | 1_1:-24918474 | Msa0015410:CDS |
| GACGAGGGAGGTTTGAGTTA+AGG | 0.426730 | 1_1:+24922792 | None:intergenic |
| AACTATTTGTGGAGAATTGT+TGG | 0.431111 | 1_1:-24921498 | Msa0015410:CDS |
| ATACTCTATTACCTTGGTTC+AGG | 0.437955 | 1_1:+24917882 | None:intergenic |
| GAAGTGATGTATACCACATC+AGG | 0.441192 | 1_1:-24916328 | Msa0015410:three_prime_UTR |
| CCATAGCTGCATATGTCATC+TGG | 0.441623 | 1_1:+24919608 | None:intergenic |
| GGTTCAGGCTTCTTTGAAGA+AGG | 0.443658 | 1_1:+24917897 | None:intergenic |
| AGGAGCTCCAATGTAGTGAT+TGG | 0.446279 | 1_1:-24919654 | Msa0015410:CDS |
| CCTCCCTCTCTCTTCAATAT+GGG | 0.447072 | 1_1:-24922647 | Msa0015410:CDS |
| CAGGCAACGGCTGCCGAAGA+AGG | 0.448253 | 1_1:-24919550 | Msa0015410:intron |
| ATTTCGAGAGGTTTCTGGTT+CGG | 0.449245 | 1_1:+24922865 | None:intergenic |
| GTCATCTGGTCTTCTGTAAG+AGG | 0.455188 | 1_1:+24919622 | None:intergenic |
| CCATTCGAAGTGCAAATCTT+GGG | 0.457879 | 1_1:-24918684 | Msa0015410:CDS |
| CTGTACTGCATTATGGTACT+GGG | 0.458731 | 1_1:+24916700 | None:intergenic |
| GCACCTTGGGATCCAATAGT+TGG | 0.460032 | 1_1:-24918328 | Msa0015410:CDS |
| AAAGTTCCTCTGTGATGTTA+TGG | 0.461542 | 1_1:-24918290 | Msa0015410:intron |
| CTGCGGAAACCAGCATTTCT+CGG | 0.462154 | 1_1:+24922617 | None:intergenic |
| ATAACATCACAGAGGAACTT+TGG | 0.466771 | 1_1:+24918292 | None:intergenic |
| CCCAAGATTTGCACTTCGAA+TGG | 0.470113 | 1_1:+24918684 | None:intergenic |
| ATGCAATCCCGGTTTCGATA+AGG | 0.470492 | 1_1:-24922524 | Msa0015410:intron |
| TCCGCAGATATCTTGAAGCT+TGG | 0.472276 | 1_1:-24922601 | Msa0015410:CDS |
| GCAAAACATTTACGTTGTGT+TGG | 0.472670 | 1_1:-24917936 | Msa0015410:CDS |
| GTGGCAAGGTACCGCACCTT+GGG | 0.474336 | 1_1:-24918341 | Msa0015410:CDS |
| ATATACTCAGGTTGAAGGCT+TGG | 0.480503 | 1_1:-24917958 | Msa0015410:intron |
| GTTCAGGTGATACCTTCAGC+AGG | 0.480716 | 1_1:-24918559 | Msa0015410:CDS |
| TCGTCTGCGGTTTAATGTAA+TGG | 0.487271 | 1_1:-24916440 | Msa0015410:three_prime_UTR |
| AACTAACTATTTAATTTCAA+CGG | 0.487872 | 1_1:-24916350 | Msa0015410:three_prime_UTR |
| ATTCTACGCTGCAGGAGAGT+TGG | 0.488155 | 1_1:-24918728 | Msa0015410:intron |
| GTTCGGTGGATCCATGTTGA+AGG | 0.490687 | 1_1:+24922882 | None:intergenic |
| AAGGAATATACTCAGGTTGA+AGG | 0.492962 | 1_1:-24917963 | Msa0015410:intron |
| ATGGATGCTCATTGCTTGCT+CGG | 0.498298 | 1_1:-24919589 | Msa0015410:CDS |
| ACAATACCTCCCAATAAAGT+TGG | 0.500595 | 1_1:+24917029 | None:intergenic |
| ATTGCATCCTTGTTCACAAA+AGG | 0.500679 | 1_1:+24922540 | None:intergenic |
| TGTGAACAAGGATGCAATCC+CGG | 0.506138 | 1_1:-24922535 | Msa0015410:CDS |
| CCAGATGACATATGCAGCTA+TGG | 0.508239 | 1_1:-24919608 | Msa0015410:CDS |
| GGAACCTCTCCGAGAAATGC+TGG | 0.508729 | 1_1:-24922626 | Msa0015410:CDS |
| ATAGCCTCTTCAGTTGAAAG+TGG | 0.510202 | 1_1:+24917133 | None:intergenic |
| TGAATCACTGCCCCTGCTGA+AGG | 0.517305 | 1_1:+24918547 | None:intergenic |
| CGAGTTGACACGCGATTTGG+AGG | 0.530138 | 1_1:+24922707 | None:intergenic |
| TTCAATGGAAATGTATTCAG+TGG | 0.535048 | 1_1:+24916603 | None:intergenic |
| AGTTCGGACGGGTTTCCACT+CGG | 0.540037 | 1_1:+24922759 | None:intergenic |
| GAGGGAGGGAGATAAGGTCG+AGG | 0.541400 | 1_1:+24922662 | None:intergenic |
| GAGGCTATTGAAGCTGCAAA+GGG | 0.542175 | 1_1:-24917118 | Msa0015410:CDS |
| TCGAGAGGTTTCTGGTTCGG+TGG | 0.543537 | 1_1:+24922868 | None:intergenic |
| ATTTAAGGTCTTTCAGGCAA+CGG | 0.546147 | 1_1:-24919563 | Msa0015410:CDS |
| CTATTTGTGGAGAATTGTTG+GGG | 0.548719 | 1_1:-24921496 | Msa0015410:CDS |
| TGAAGGGGAAGAGATGAATG+AGG | 0.551284 | 1_1:+24922899 | None:intergenic |
| TTTAAAGGAATTGTATTCAG+TGG | 0.552369 | 1_1:+24916471 | None:intergenic |
| AGTGGCAAGGTACCGCACCT+TGG | 0.553048 | 1_1:-24918342 | Msa0015410:CDS |
| AGAGGCTATTGAAGCTGCAA+AGG | 0.553698 | 1_1:-24917119 | Msa0015410:CDS |
| GAAGCCACTTTCAACTGAAG+AGG | 0.554381 | 1_1:-24917137 | Msa0015410:CDS |
| GAAGGGGAAGAGATGAATGA+GGG | 0.558624 | 1_1:+24922900 | None:intergenic |
| ATGAGTTAGATGAGTGAACT+CGG | 0.559418 | 1_1:+24922816 | None:intergenic |
| TGATTCAAAAGTCATCATGT+AGG | 0.563710 | 1_1:-24918531 | Msa0015410:CDS |
| TTAAACAAATTGCATCCATA+CGG | 0.563825 | 1_1:+24916238 | None:intergenic |
| TTGAAAATTGTCAGAAAACA+TGG | 0.565414 | 1_1:-24918481 | Msa0015410:CDS |
| TTCGGTGGATCCATGTTGAA+GGG | 0.566857 | 1_1:+24922883 | None:intergenic |
| GATTCAAAAGTCATCATGTA+GGG | 0.569974 | 1_1:-24918530 | Msa0015410:CDS |
| GATTAATTTAAACTTCGTCA+AGG | 0.570655 | 1_1:-24916515 | Msa0015410:three_prime_UTR |
| GATTAATTTAAACTTCGTCA+AGG | 0.571624 | 1_1:-24916647 | Msa0015410:exon |
| TCATCTCTTCCCCTTCAACA+TGG | 0.572456 | 1_1:-24922893 | Msa0015410:exon |
| CCCATATTGAAGAGAGAGGG+AGG | 0.572831 | 1_1:+24922647 | None:intergenic |
| GGAGGGAGATAAGGTCGAGG+AGG | 0.575742 | 1_1:+24922665 | None:intergenic |
| TCAAGATGCACAAAATGCAA+TGG | 0.575984 | 1_1:-24917172 | Msa0015410:CDS |
| ATGAGTGAACTCGGGTGAGT+CGG | 0.577885 | 1_1:+24922825 | None:intergenic |
| ACACTCGTAATATCCAAATA+CGG | 0.580297 | 1_1:+24921584 | None:intergenic |
| ATTTAGAGAACTTTGATGAG+TGG | 0.582031 | 1_1:-24918360 | Msa0015410:CDS |
| ACCTTGGGATCCAATAGTTG+GGG | 0.583139 | 1_1:-24918326 | Msa0015410:CDS |
| ATGTAGGGATACTAAGCCAA+TGG | 0.584459 | 1_1:-24918515 | Msa0015410:CDS |
| ATTCAAACCTTATCGAAACC+GGG | 0.584714 | 1_1:+24922517 | None:intergenic |
| CTCCAAATCGCGTGTCAACT+CGG | 0.589593 | 1_1:-24922706 | Msa0015410:CDS |
| ATTTGGAGGAGTGAGACGGT+GGG | 0.590066 | 1_1:+24922721 | None:intergenic |
| GAGAACTTTGATGAGTGGCA+AGG | 0.591373 | 1_1:-24918355 | Msa0015410:CDS |
| GATTTGGAGGAGTGAGACGG+TGG | 0.592283 | 1_1:+24922720 | None:intergenic |
| TTCAGGTGATACCTTCAGCA+GGG | 0.596087 | 1_1:-24918558 | Msa0015410:CDS |
| AAGCAACAACAGTTGAGAGA+AGG | 0.598287 | 1_1:+24916384 | None:intergenic |
| CTGTCACCAACTTTATTGGG+AGG | 0.600563 | 1_1:-24917035 | Msa0015410:intron |
| GTTGTGACCAATCACTACAT+TGG | 0.602180 | 1_1:+24919647 | None:intergenic |
| GTTCCCATATTGAAGAGAGA+GGG | 0.604804 | 1_1:+24922644 | None:intergenic |
| GATGCACAAAATGCAATGGA+AGG | 0.607518 | 1_1:-24917168 | Msa0015410:CDS |
| GGTTCCCATATTGAAGAGAG+AGG | 0.608783 | 1_1:+24922643 | None:intergenic |
| TCGTCGGACTCGACGCCGAG+TGG | 0.612313 | 1_1:-24922774 | Msa0015410:CDS |
| GTGACGAAGTGGATTTCGAG+AGG | 0.612730 | 1_1:+24922853 | None:intergenic |
| TCTTCAAGTAATCCCTGATG+TGG | 0.613317 | 1_1:+24916315 | None:intergenic |
| TCTGAATGATAAATGCCGTA+TGG | 0.614774 | 1_1:-24916253 | Msa0015410:three_prime_UTR |
| GAACTCGGGTGAGTCGGTGG+TGG | 0.616952 | 1_1:+24922831 | None:intergenic |
| CCATATTGAAGAGAGAGGGA+GGG | 0.618013 | 1_1:+24922648 | None:intergenic |
| AAGGATGTGCACGTGAGTAA+TGG | 0.620225 | 1_1:-24916496 | Msa0015410:three_prime_UTR |
| AAGGATGTGCACGTGAGTAA+TGG | 0.620225 | 1_1:-24916628 | Msa0015410:three_prime_UTR |
| AGTGAACTCGGGTGAGTCGG+TGG | 0.624369 | 1_1:+24922828 | None:intergenic |
| AGTCGGTGGTGGTGACGAAG+TGG | 0.632308 | 1_1:+24922842 | None:intergenic |
| CTCGGCGTCGAGTCCGACGA+GGG | 0.632562 | 1_1:+24922777 | None:intergenic |
| TGAGTTAGATGAGTGAACTC+GGG | 0.633030 | 1_1:+24922817 | None:intergenic |
| TTTGGAGGAGTGAGACGGTG+GGG | 0.638956 | 1_1:+24922722 | None:intergenic |
| TTAACTCAAACCTCCCTCGT+CGG | 0.645159 | 1_1:-24922790 | Msa0015410:CDS |
| TCGGTGGATCCATGTTGAAG+GGG | 0.645315 | 1_1:+24922884 | None:intergenic |
| TCAGGTGATACCTTCAGCAG+GGG | 0.648948 | 1_1:-24918557 | Msa0015410:CDS |
| CGCGATTTGGAGGAGTGAGA+CGG | 0.650990 | 1_1:+24922717 | None:intergenic |
| ACTCGGCGTCGAGTCCGACG+AGG | 0.653753 | 1_1:+24922776 | None:intergenic |
| TTGTCACCAAAAGCTAACAA+TGG | 0.658647 | 1_1:+24916183 | None:intergenic |
| AACTATTGGATCCCAAGGTG+CGG | 0.659265 | 1_1:+24918330 | None:intergenic |
| AAAAGCTAACAATGGCTGAG+TGG | 0.666874 | 1_1:+24916191 | None:intergenic |
| ATGTATAAACTAATTGTACA+CGG | 0.669784 | 1_1:+24916538 | None:intergenic |
| GGCGTCGAGTCCGACGAGGG+AGG | 0.674089 | 1_1:+24922780 | None:intergenic |
| AAGTGATGTATACCACATCA+GGG | 0.681223 | 1_1:-24916327 | Msa0015410:three_prime_UTR |
| GAAACCAGCATTTCTCGGAG+AGG | 0.684392 | 1_1:+24922622 | None:intergenic |
| TCCAAGCTTCAAGATATCTG+CGG | 0.684999 | 1_1:+24922600 | None:intergenic |
| CTTCAAAGAAGCCTGAACCA+AGG | 0.685428 | 1_1:-24917893 | Msa0015410:intron |
| CCTTGGGATCCAATAGTTGG+GGG | 0.730135 | 1_1:-24918325 | Msa0015410:CDS |
| TGCTTACCATAACATCACAG+AGG | 0.777770 | 1_1:+24918284 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAAAAACTAGTTT+TGG | - | chr1_1:24918009-24918028 | Msa0015410:intron | 10.0% |
| !! | TATATTTATTGAGTTTAAAA+AGG | - | chr1_1:24919198-24919217 | Msa0015410:intron | 10.0% |
| !!! | ATAATACTTTTCTAAATCAA+AGG | + | chr1_1:24918046-24918065 | None:intergenic | 15.0% |
| !! | ACATGAATAAAATAATTGTA+AGG | + | chr1_1:24918665-24918684 | None:intergenic | 15.0% |
| !! | AAAAAAACATAAATGTTCTT+TGG | + | chr1_1:24918909-24918928 | None:intergenic | 15.0% |
| !! | ATTCTGTAACTAATAATATT+TGG | + | chr1_1:24919176-24919195 | None:intergenic | 15.0% |
| !! | AAAACAAAATATAGAATCAT+TGG | + | chr1_1:24922206-24922225 | None:intergenic | 15.0% |
| !!! | AACTAACTATTTAATTTCAA+CGG | - | chr1_1:24922735-24922754 | Msa0015410:CDS | 15.0% |
| !! | AATATAATATATGCAAAGTC+CGG | - | chr1_1:24916963-24916982 | Msa0015410:intron | 20.0% |
| !! | AAACATACTGATAGTTATAT+TGG | + | chr1_1:24917158-24917177 | None:intergenic | 20.0% |
| !! | CTAGTTTCTATCTTAAAAAA+AGG | + | chr1_1:24918085-24918104 | None:intergenic | 20.0% |
| !! | AAGAATATTAAAGCTTTACA+TGG | + | chr1_1:24918601-24918620 | None:intergenic | 20.0% |
| !! | TGAGTTTAAAAAGGAATAAT+AGG | - | chr1_1:24919207-24919226 | Msa0015410:intron | 20.0% |
| !! | ATGTATATAATAGGACATAA+GGG | - | chr1_1:24919293-24919312 | Msa0015410:intron | 20.0% |
| !! | AACTGAATTATATTTGCTTT+AGG | - | chr1_1:24919411-24919430 | Msa0015410:intron | 20.0% |
| !!! | TATATGGCTTATTTTATAAC+TGG | - | chr1_1:24919816-24919835 | Msa0015410:intron | 20.0% |
| !!! | TTTTTTGTCTTTTCTTGATA+TGG | + | chr1_1:24919880-24919899 | None:intergenic | 20.0% |
| !! | TTTAAAAAATGCAAACTGAA+AGG | + | chr1_1:24920019-24920038 | None:intergenic | 20.0% |
| !!! | TCGTTTGTTAAAATAAATAG+TGG | - | chr1_1:24920042-24920061 | Msa0015410:intron | 20.0% |
| !! | ATATTTATTGAAATGCGTTA+TGG | - | chr1_1:24921021-24921040 | Msa0015410:intron | 20.0% |
| !! | TAAGTTCATTATTATTTGTG+TGG | - | chr1_1:24921265-24921284 | Msa0015410:intron | 20.0% |
| !! | TCAAAATATGTAATCTTTCT+AGG | + | chr1_1:24921490-24921509 | None:intergenic | 20.0% |
| !!! | TAGAAAGATTACATATTTTG+AGG | - | chr1_1:24921489-24921508 | Msa0015410:CDS | 20.0% |
| !! | TAGTATAACATTATCTTTCA+AGG | - | chr1_1:24921556-24921575 | Msa0015410:CDS | 20.0% |
| !!! | GTATAGAATGTTAATTTTCA+TGG | - | chr1_1:24921595-24921614 | Msa0015410:intron | 20.0% |
| !!! | ATTTGACTTAAAAAATCCAT+GGG | + | chr1_1:24921666-24921685 | None:intergenic | 20.0% |
| !!! | AATTTGACTTAAAAAATCCA+TGG | + | chr1_1:24921667-24921686 | None:intergenic | 20.0% |
| !! | AGTCAAATTAATATTTAACC+TGG | - | chr1_1:24921678-24921697 | Msa0015410:intron | 20.0% |
| !!! | TACTTAGATTTCAAGTATAA+AGG | - | chr1_1:24921735-24921754 | Msa0015410:intron | 20.0% |
| !!! | ATAAGCAATTTGGTATTTTT+TGG | + | chr1_1:24921996-24922015 | None:intergenic | 20.0% |
| !! | TTCTTGTTAAATAAGCAATT+TGG | + | chr1_1:24922006-24922025 | None:intergenic | 20.0% |
| !!! | TTAACAAGAATTTAGAGTTT+TGG | - | chr1_1:24922016-24922035 | Msa0015410:intron | 20.0% |
| !! | GTTATGTAAGATAAATGATA+AGG | + | chr1_1:24922121-24922140 | None:intergenic | 20.0% |
| !! | AAATAACTTCAAAACATATG+AGG | + | chr1_1:24922260-24922279 | None:intergenic | 20.0% |
| !! | ATGTATAAACTAATTGTACA+CGG | + | chr1_1:24922550-24922569 | None:intergenic | 20.0% |
| ! | GTTGTAATAATTAGTTACAC+CGG | - | chr1_1:24916747-24916766 | Msa0015410:intron | 25.0% |
| ! | ATTCTAACTTCTTAACTAAC+CGG | + | chr1_1:24916769-24916788 | None:intergenic | 25.0% |
| ! | ATATAATATATGCAAAGTCC+GGG | - | chr1_1:24916964-24916983 | Msa0015410:intron | 25.0% |
| !!! | TCTAATTGGCTTTTTTTTTG+TGG | + | chr1_1:24917006-24917025 | None:intergenic | 25.0% |
| !! | TAAGTACTCATTTAGAATCA+CGG | - | chr1_1:24917031-24917050 | Msa0015410:intron | 25.0% |
| ! | CAGGAATTTAATATATGTGA+TGG | - | chr1_1:24917182-24917201 | Msa0015410:CDS | 25.0% |
| ! | CATCTTCAGTTTAAGAAAAA+TGG | - | chr1_1:24917531-24917550 | Msa0015410:intron | 25.0% |
| ! | TTCAGTTTAAGAAAAATGGA+AGG | - | chr1_1:24917535-24917554 | Msa0015410:intron | 25.0% |
| !!! | AGCCATTCAATTCAATTTTT+TGG | - | chr1_1:24917647-24917666 | Msa0015410:CDS | 25.0% |
| !!! | GCCATTCAATTCAATTTTTT+GGG | - | chr1_1:24917648-24917667 | Msa0015410:CDS | 25.0% |
| ! | ACCCAAAAAATTGAATTGAA+TGG | + | chr1_1:24917652-24917671 | None:intergenic | 25.0% |
| !!! | CACAATTAGAAGTTAGTTTT+CGG | - | chr1_1:24917788-24917807 | Msa0015410:intron | 25.0% |
| ! | AGGAACACTAGAAAATATAT+CGG | + | chr1_1:24917959-24917978 | None:intergenic | 25.0% |
| ! | AATAATACTGTAGGATACAA+AGG | + | chr1_1:24917979-24917998 | None:intergenic | 25.0% |
| ! | TTTGTCGAAAATAATACTGT+AGG | + | chr1_1:24917988-24918007 | None:intergenic | 25.0% |
| ! | CTATCTTAAAAAAAGGAGTT+CGG | + | chr1_1:24918078-24918097 | None:intergenic | 25.0% |
| !!! | AAAACAAGATGTTAGCTTTT+TGG | + | chr1_1:24918165-24918184 | None:intergenic | 25.0% |
| ! | AAATTTCATTCCTAAGTAGA+TGG | - | chr1_1:24918833-24918852 | Msa0015410:intron | 25.0% |
| ! | AAGACAACTTACAAAAGATT+AGG | + | chr1_1:24918996-24919015 | None:intergenic | 25.0% |
| ! | CAGTTTATGTTAATAGAAAC+AGG | - | chr1_1:24919270-24919289 | Msa0015410:intron | 25.0% |
| ! | AGAAACAGGATGTATATAAT+AGG | - | chr1_1:24919284-24919303 | Msa0015410:intron | 25.0% |
| ! | GATGTATATAATAGGACATA+AGG | - | chr1_1:24919292-24919311 | Msa0015410:intron | 25.0% |
| ! | TGTATATAATAGGACATAAG+GGG | - | chr1_1:24919294-24919313 | Msa0015410:intron | 25.0% |
| !! | TAGCATTTTCAGTTACTATA+AGG | - | chr1_1:24919384-24919403 | Msa0015410:intron | 25.0% |
| ! | GCGAATTAATTTAAACTAGA+GGG | + | chr1_1:24919676-24919695 | None:intergenic | 25.0% |
| !!! | CAGCATTCTATTTTTCAAAT+TGG | - | chr1_1:24919726-24919745 | Msa0015410:intron | 25.0% |
| !! | AATTTCTTCTGAAGAGTTTA+TGG | + | chr1_1:24919778-24919797 | None:intergenic | 25.0% |
| ! | TATTCTATATCCATTCACTA+AGG | - | chr1_1:24920296-24920315 | Msa0015410:intron | 25.0% |
| ! | TACACAGAATTTCTTGTAAT+TGG | - | chr1_1:24920324-24920343 | Msa0015410:intron | 25.0% |
| ! | TTCAACAAAAATTCATCCAT+TGG | + | chr1_1:24920589-24920608 | None:intergenic | 25.0% |
| ! | TTGAAAATTGTCAGAAAACA+TGG | - | chr1_1:24920604-24920623 | Msa0015410:intron | 25.0% |
| !! | TTCTCTAAATGTTTTTCTCT+GGG | + | chr1_1:24920715-24920734 | None:intergenic | 25.0% |
| ! | GTTCATAAAAATTGAAGAGA+GGG | + | chr1_1:24920854-24920873 | None:intergenic | 25.0% |
| ! | TGGAGCATATAATATATGAT+CGG | - | chr1_1:24920951-24920970 | Msa0015410:intron | 25.0% |
| ! | ATAAAATGTGAGTATGAATC+TGG | - | chr1_1:24921098-24921117 | Msa0015410:intron | 25.0% |
| ! | TCAATTTCTCAAGCAATATA+TGG | + | chr1_1:24921812-24921831 | None:intergenic | 25.0% |
| ! | GATCTTCGTTAATATTTAGT+TGG | + | chr1_1:24921885-24921904 | None:intergenic | 25.0% |
| ! | TAAGATAAATGATAAGGCAA+TGG | + | chr1_1:24922115-24922134 | None:intergenic | 25.0% |
| ! | AAAACATATGAGGTGAAAAA+GGG | + | chr1_1:24922250-24922269 | None:intergenic | 25.0% |
| !!! | ATTTATTTTGACTACGAAAG+AGG | - | chr1_1:24922276-24922295 | Msa0015410:intron | 25.0% |
| !!! | TTTATTTTGACTACGAAAGA+GGG | - | chr1_1:24922277-24922296 | Msa0015410:intron | 25.0% |
| ! | CCTACTCTGATTTATTATTA+CGG | - | chr1_1:24922312-24922331 | Msa0015410:intron | 25.0% |
| ! | GATTAATTTAAACTTCGTCA+AGG | - | chr1_1:24922438-24922457 | Msa0015410:intron | 25.0% |
| ! | GATTAATTTAAACTTCGTCA+AGG | - | chr1_1:24922438-24922457 | Msa0015410:intron | 25.0% |
| ! | TTTAAAGGAATTGTATTCAG+TGG | + | chr1_1:24922617-24922636 | None:intergenic | 25.0% |
| !! | CAGACGATATTTTTCTTTAA+AGG | + | chr1_1:24922632-24922651 | None:intergenic | 25.0% |
| ! | TTAAAGAAAAATATCGTCTG+CGG | - | chr1_1:24922632-24922651 | Msa0015410:CDS | 25.0% |
| ! | TTCAAAGACAATGTATTTAG+TGG | + | chr1_1:24922673-24922692 | None:intergenic | 25.0% |
| ! | TTAAACAAATTGCATCCATA+CGG | + | chr1_1:24922850-24922869 | None:intergenic | 25.0% |
| GTTAACTATAGGAGAAGAAA+TGG | + | chr1_1:24916157-24916176 | None:intergenic | 30.0% | |
| AATTCAAACCTTATCGAAAC+CGG | + | chr1_1:24916572-24916591 | None:intergenic | 30.0% | |
| ACTCATCGAGAATTGTAATA+TGG | + | chr1_1:24916676-24916695 | None:intergenic | 30.0% | |
| TACCATACTACAATTCTTGA+TGG | - | chr1_1:24916799-24916818 | Msa0015410:intron | 30.0% | |
| TTCCATCAAGAATTGTAGTA+TGG | + | chr1_1:24916804-24916823 | None:intergenic | 30.0% | |
| TATAATATATGCAAAGTCCG+GGG | - | chr1_1:24916965-24916984 | Msa0015410:intron | 30.0% | |
| !!! | AATTGGCTTTTTTTTTGTGG+TGG | + | chr1_1:24917003-24917022 | None:intergenic | 30.0% |
| GAGTACTTAGTTGTTCTAAT+TGG | + | chr1_1:24917020-24917039 | None:intergenic | 30.0% | |
| AAAATGTAGAAGCTCCAATT+TGG | + | chr1_1:24917092-24917111 | None:intergenic | 30.0% | |
| ACTGATAGTTATATTGGCAA+TGG | + | chr1_1:24917152-24917171 | None:intergenic | 30.0% | |
| ACTATCAGTATGTTTAATGC+AGG | - | chr1_1:24917163-24917182 | Msa0015410:CDS | 30.0% | |
| TGTAATATGATATCAGAGTC+AGG | + | chr1_1:24917229-24917248 | None:intergenic | 30.0% | |
| ACACTCGTAATATCCAAATA+CGG | + | chr1_1:24917504-24917523 | None:intergenic | 30.0% | |
| AAGAGTTTGTCAACTATTTG+TGG | - | chr1_1:24917576-24917595 | Msa0015410:intron | 30.0% | |
| AACTATTTGTGGAGAATTGT+TGG | - | chr1_1:24917587-24917606 | Msa0015410:intron | 30.0% | |
| ACTATTTGTGGAGAATTGTT+GGG | - | chr1_1:24917588-24917607 | Msa0015410:intron | 30.0% | |
| TTGCTGTATTAAATGTAGTC+AGG | - | chr1_1:24917916-24917935 | Msa0015410:CDS | 30.0% | |
| !!! | AAAACTAGTTTTGGAAGCTA+AGG | - | chr1_1:24918018-24918037 | Msa0015410:intron | 30.0% |
| !!! | AAACTAGTTTTGGAAGCTAA+GGG | - | chr1_1:24918019-24918038 | Msa0015410:intron | 30.0% |
| GTCATAAACGTAGATATGTT+TGG | - | chr1_1:24918106-24918125 | Msa0015410:intron | 30.0% | |
| ! | ATTTGTTAGCTTAAACTTCC+AGG | + | chr1_1:24918269-24918288 | None:intergenic | 30.0% |
| CCTATATAATAGAGTCTATG+TGG | + | chr1_1:24918450-24918469 | None:intergenic | 30.0% | |
| CCACATAGACTCTATTATAT+AGG | - | chr1_1:24918447-24918466 | Msa0015410:CDS | 30.0% | |
| ! | CTGGCGATATTTATGTATTT+TGG | + | chr1_1:24918535-24918554 | None:intergenic | 30.0% |
| CAAAATACATAAATATCGCC+AGG | - | chr1_1:24918533-24918552 | Msa0015410:CDS | 30.0% | |
| ATGTCAGACATCAATATACA+CGG | - | chr1_1:24918681-24918700 | Msa0015410:CDS | 30.0% | |
| ! | ATATACACGGTGTCAAAATT+AGG | - | chr1_1:24918694-24918713 | Msa0015410:CDS | 30.0% |
| !! | ATTAGGTGCTTTATTTCTGT+AGG | - | chr1_1:24918711-24918730 | Msa0015410:CDS | 30.0% |
| TTAGGAATGAAATTTGCACA+AGG | + | chr1_1:24918828-24918847 | None:intergenic | 30.0% | |
| TTTGTTGAATCCATCTACTT+AGG | + | chr1_1:24918846-24918865 | None:intergenic | 30.0% | |
| ACATGCTTTCTCAAATTTGT+TGG | - | chr1_1:24919088-24919107 | Msa0015410:intron | 30.0% | |
| TAGTAACTGAAAATGCTAGT+TGG | + | chr1_1:24919382-24919401 | None:intergenic | 30.0% | |
| CTTTCAGTAAAAACCTTCTT+CGG | + | chr1_1:24919551-24919570 | None:intergenic | 30.0% | |
| CGCGAATTAATTTAAACTAG+AGG | + | chr1_1:24919677-24919696 | None:intergenic | 30.0% | |
| ! | CAGAAGAAATTATGATGATG+CGG | - | chr1_1:24919787-24919806 | Msa0015410:intron | 30.0% |
| AAAATTATTTGTGCCATCCT+TGG | - | chr1_1:24919898-24919917 | Msa0015410:intron | 30.0% | |
| GCAAAGTGAAACTATTAATC+AGG | + | chr1_1:24919944-24919963 | None:intergenic | 30.0% | |
| GATGTGAAAGTAAGATCATA+TGG | + | chr1_1:24920265-24920284 | None:intergenic | 30.0% | |
| TTTATTAAATTCTACGCTGC+AGG | - | chr1_1:24920349-24920368 | Msa0015410:intron | 30.0% | |
| ACTTCGAATGGATAATCTAT+TGG | + | chr1_1:24920392-24920411 | None:intergenic | 30.0% | |
| TGATTCAAAAGTCATCATGT+AGG | - | chr1_1:24920554-24920573 | Msa0015410:intron | 30.0% | |
| GATTCAAAAGTCATCATGTA+GGG | - | chr1_1:24920555-24920574 | Msa0015410:intron | 30.0% | |
| ! | GTTCTCTAAATGTTTTTCTC+TGG | + | chr1_1:24920716-24920735 | None:intergenic | 30.0% |
| ATTTAGAGAACTTTGATGAG+TGG | - | chr1_1:24920725-24920744 | Msa0015410:intron | 30.0% | |
| CGTTCATAAAAATTGAAGAG+AGG | + | chr1_1:24920855-24920874 | None:intergenic | 30.0% | |
| ACCTTCAAAGATTAACGAAA+GGG | + | chr1_1:24920887-24920906 | None:intergenic | 30.0% | |
| AACCTTCAAAGATTAACGAA+AGG | + | chr1_1:24920888-24920907 | None:intergenic | 30.0% | |
| ! | ATCTTTGAAGGTTAAGCAAT+AGG | - | chr1_1:24920895-24920914 | Msa0015410:intron | 30.0% |
| TAGTTAAATTCCAATCACTC+TGG | - | chr1_1:24920931-24920950 | Msa0015410:intron | 30.0% | |
| ATTGAAATGCGTTATGGAAA+AGG | - | chr1_1:24921027-24921046 | Msa0015410:intron | 30.0% | |
| CAAAACATTTACGTTGTGTT+GGG | - | chr1_1:24921150-24921169 | Msa0015410:intron | 30.0% | |
| AAAAAATGAACAGCTACTTG+AGG | - | chr1_1:24921443-24921462 | Msa0015410:intron | 30.0% | |
| !!! | ACTTGAGGTATTGTTGTTTT+AGG | - | chr1_1:24921458-24921477 | Msa0015410:intron | 30.0% |
| TATCTTTCAAGGAACTCTTA+TGG | - | chr1_1:24921567-24921586 | Msa0015410:CDS | 30.0% | |
| !!! | CAATTTTAGCTGTGTCATTA+TGG | + | chr1_1:24921837-24921856 | None:intergenic | 30.0% |
| GTTGGAAAGTTTCAATAATC+TGG | + | chr1_1:24921867-24921886 | None:intergenic | 30.0% | |
| !! | TTTAGAGTTTTGGCAATGTA+TGG | - | chr1_1:24922026-24922045 | Msa0015410:intron | 30.0% |
| !! | ATAGAATCATTGGTTTCAGT+TGG | + | chr1_1:24922196-24922215 | None:intergenic | 30.0% |
| AAACATATGAGGTGAAAAAG+GGG | + | chr1_1:24922249-24922268 | None:intergenic | 30.0% | |
| CAAAACATATGAGGTGAAAA+AGG | + | chr1_1:24922251-24922270 | None:intergenic | 30.0% | |
| !!! | TTATTTTGACTACGAAAGAG+GGG | - | chr1_1:24922278-24922297 | Msa0015410:intron | 30.0% |
| CCGTAATAATAAATCAGAGT+AGG | + | chr1_1:24922315-24922334 | None:intergenic | 30.0% | |
| TTCAATGGAAATGTATTCAG+TGG | + | chr1_1:24922485-24922504 | None:intergenic | 30.0% | |
| ! | AGACTGACATTTTTCTTCAA+TGG | + | chr1_1:24922500-24922519 | None:intergenic | 30.0% |
| !!! | GGGTTTTGGTTGTTAACTAT+AGG | + | chr1_1:24916168-24916187 | None:intergenic | 35.0% |
| ATGAGTTAGATGAGTGAACT+CGG | + | chr1_1:24916272-24916291 | None:intergenic | 35.0% | |
| ! | TCTTCTACCTTTTGTGAACA+AGG | - | chr1_1:24916538-24916557 | Msa0015410:three_prime_UTR | 35.0% |
| ATTGCATCCTTGTTCACAAA+AGG | + | chr1_1:24916548-24916567 | None:intergenic | 35.0% | |
| ATTCAAACCTTATCGAAACC+GGG | + | chr1_1:24916571-24916590 | None:intergenic | 35.0% | |
| TGTTCTATTGTCGTATCTCT+TGG | + | chr1_1:24916880-24916899 | None:intergenic | 35.0% | |
| !!! | TTTTCACGTTTTTCAAGCCT+TGG | - | chr1_1:24917108-24917127 | Msa0015410:CDS | 35.0% |
| !!! | TTTCACGTTTTTCAAGCCTT+GGG | - | chr1_1:24917109-24917128 | Msa0015410:CDS | 35.0% |
| ! | GACTGGTTAGTTGTTCTAAT+TGG | + | chr1_1:24917358-24917377 | None:intergenic | 35.0% |
| ACTAGTCAGTTCATTTAGAC+TGG | + | chr1_1:24917375-24917394 | None:intergenic | 35.0% | |
| CTATTTGTGGAGAATTGTTG+GGG | - | chr1_1:24917589-24917608 | Msa0015410:intron | 35.0% | |
| TGTGTTCAGAAAACAAGTAG+TGG | - | chr1_1:24917679-24917698 | Msa0015410:CDS | 35.0% | |
| ! | CAAATATCACAGCATTGAGT+AGG | - | chr1_1:24917727-24917746 | Msa0015410:CDS | 35.0% |
| !!! | AAGTTAGTTTTCGGTGTTTG+TGG | - | chr1_1:24917797-24917816 | Msa0015410:intron | 35.0% |
| ! | GAGTTTTCACTTAGCATATG+AGG | - | chr1_1:24917868-24917887 | Msa0015410:intron | 35.0% |
| TTGTATAAAACACATCGTCC+TGG | - | chr1_1:24918248-24918267 | Msa0015410:intron | 35.0% | |
| ! | ATGGCCTTAAACTTGTATCA+TGG | - | chr1_1:24918308-24918327 | Msa0015410:CDS | 35.0% |
| GAAGCCATGATACAAGTTTA+AGG | + | chr1_1:24918315-24918334 | None:intergenic | 35.0% | |
| CTTAATACATGAACAGTGAG+CGG | - | chr1_1:24918355-24918374 | Msa0015410:CDS | 35.0% | |
| TTAATACATGAACAGTGAGC+GGG | - | chr1_1:24918356-24918375 | Msa0015410:CDS | 35.0% | |
| TCTCTAGTTATCTCTCATTC+AGG | + | chr1_1:24918387-24918406 | None:intergenic | 35.0% | |
| AGATAACTAGAGACATGTGA+TGG | - | chr1_1:24918394-24918413 | Msa0015410:CDS | 35.0% | |
| GTGTAGTTCAAAGTTCAAAC+CGG | + | chr1_1:24918428-24918447 | None:intergenic | 35.0% | |
| TCAAAGCATAAGTTGCAAGT+TGG | - | chr1_1:24918620-24918639 | Msa0015410:CDS | 35.0% | |
| TTGGCAGCATTAATGTTCTT+TGG | + | chr1_1:24918944-24918963 | None:intergenic | 35.0% | |
| ACATTAATGCTGCCAACATA+AGG | - | chr1_1:24918948-24918967 | Msa0015410:intron | 35.0% | |
| GTTTAAACCAGTCCTTATGT+TGG | + | chr1_1:24918963-24918982 | None:intergenic | 35.0% | |
| ! | TTTTGCTCCATTGGTATTTC+AGG | - | chr1_1:24919342-24919361 | Msa0015410:intron | 35.0% |
| ! | TTTGGAACCTGAAATACCAA+TGG | + | chr1_1:24919352-24919371 | None:intergenic | 35.0% |
| TTGCTTGCTCGGAATATTTA+AGG | - | chr1_1:24919507-24919526 | Msa0015410:intron | 35.0% | |
| ! | CGGAATATTTAAGGTCTTTC+AGG | - | chr1_1:24919516-24919535 | Msa0015410:intron | 35.0% |
| ! | ATTTAAGGTCTTTCAGGCAA+CGG | - | chr1_1:24919522-24919541 | Msa0015410:intron | 35.0% |
| GAAAGTTTCATACCAATCTC+TGG | - | chr1_1:24919566-24919585 | Msa0015410:CDS | 35.0% | |
| ! | TCTATAGTTTGTCCAGAGAT+TGG | + | chr1_1:24919581-24919600 | None:intergenic | 35.0% |
| TTGGATCGATTAAGTTTGAC+TGG | - | chr1_1:24919745-24919764 | Msa0015410:intron | 35.0% | |
| GATGATGCGGAAAAGATATA+TGG | - | chr1_1:24919800-24919819 | Msa0015410:intron | 35.0% | |
| TTCTTGATATGGAACTCAAG+TGG | + | chr1_1:24919869-24919888 | None:intergenic | 35.0% | |
| CAAATGGAAAATTCCAAGGA+TGG | + | chr1_1:24919914-24919933 | None:intergenic | 35.0% | |
| GACACAAATGGAAAATTCCA+AGG | + | chr1_1:24919918-24919937 | None:intergenic | 35.0% | |
| TTAATCAGGCAAGACACAAA+TGG | + | chr1_1:24919930-24919949 | None:intergenic | 35.0% | |
| TTGACCAAGTAGCAGATTAT+TGG | - | chr1_1:24919972-24919991 | Msa0015410:intron | 35.0% | |
| TGACCAAGTAGCAGATTATT+GGG | - | chr1_1:24919973-24919992 | Msa0015410:intron | 35.0% | |
| TGCATCACTTGTAAAGACAA+TGG | - | chr1_1:24920136-24920155 | Msa0015410:intron | 35.0% | |
| GTGTATACATCCTTAGTGAA+TGG | + | chr1_1:24920309-24920328 | None:intergenic | 35.0% | |
| ! | CACACAATTTTGTGAAGCTT+TGG | - | chr1_1:24920471-24920490 | Msa0015410:intron | 35.0% |
| TTCTTGTTCTGATGTTGTTC+AGG | - | chr1_1:24920510-24920529 | Msa0015410:intron | 35.0% | |
| TTGTCAGAAAACATGGTGAT+AGG | - | chr1_1:24920611-24920630 | Msa0015410:intron | 35.0% | |
| ! | TGGTGATAGGATTTTGCTTA+AGG | - | chr1_1:24920624-24920643 | Msa0015410:intron | 35.0% |
| !!! | CGTTTCTTTTTTGAGGTCTT+GGG | + | chr1_1:24920664-24920683 | None:intergenic | 35.0% |
| CCAAGACCTCAAAAAAGAAA+CGG | - | chr1_1:24920662-24920681 | Msa0015410:intron | 35.0% | |
| !!! | CTTCTTCCGTTTCTTTTTTG+AGG | + | chr1_1:24920671-24920690 | None:intergenic | 35.0% |
| AAGAAGCAGTTGCCAATTAA+TGG | - | chr1_1:24920685-24920704 | Msa0015410:intron | 35.0% | |
| AGAAGCAGTTGCCAATTAAT+GGG | - | chr1_1:24920686-24920705 | Msa0015410:intron | 35.0% | |
| ATAACATCACAGAGGAACTT+TGG | + | chr1_1:24920796-24920815 | None:intergenic | 35.0% | |
| AAAGTTCCTCTGTGATGTTA+TGG | - | chr1_1:24920795-24920814 | Msa0015410:intron | 35.0% | |
| ACCCTTTCGTTAATCTTTGA+AGG | - | chr1_1:24920883-24920902 | Msa0015410:intron | 35.0% | |
| ATTATATGCTCCAGAGTGAT+TGG | + | chr1_1:24920944-24920963 | None:intergenic | 35.0% | |
| AATGCGTTATGGAAAAGGAA+AGG | - | chr1_1:24921032-24921051 | Msa0015410:intron | 35.0% | |
| ATGTGAGTATGAATCTGGTA+AGG | - | chr1_1:24921103-24921122 | Msa0015410:intron | 35.0% | |
| ATCTGGTAAGGAATATACTC+AGG | - | chr1_1:24921115-24921134 | Msa0015410:intron | 35.0% | |
| !! | AAGGAATATACTCAGGTTGA+AGG | - | chr1_1:24921122-24921141 | Msa0015410:intron | 35.0% |
| GCAAAACATTTACGTTGTGT+TGG | - | chr1_1:24921149-24921168 | Msa0015410:intron | 35.0% | |
| ATACTCTATTACCTTGGTTC+AGG | + | chr1_1:24921206-24921225 | None:intergenic | 35.0% | |
| ! | AGAAGCATACTCTATTACCT+TGG | + | chr1_1:24921212-24921231 | None:intergenic | 35.0% |
| CATTATTATTTGTGTGGCAG+CGG | - | chr1_1:24921271-24921290 | Msa0015410:intron | 35.0% | |
| ! | TTCTATTTTCCTCTTCCTGT+CGG | - | chr1_1:24921300-24921319 | Msa0015410:intron | 35.0% |
| ACAATGATAATTCATCCGAC+AGG | + | chr1_1:24921318-24921337 | None:intergenic | 35.0% | |
| !!! | AGAAAAGAGTGCTTTTGACA+CGG | - | chr1_1:24921367-24921386 | Msa0015410:intron | 35.0% |
| ACCATGCAAAAAATGAGCTA+GGG | + | chr1_1:24921771-24921790 | None:intergenic | 35.0% | |
| TCAAGATGCACAAAATGCAA+TGG | - | chr1_1:24921913-24921932 | Msa0015410:intron | 35.0% | |
| ACAATACCTCCCAATAAAGT+TGG | + | chr1_1:24922059-24922078 | None:intergenic | 35.0% | |
| AGTTGGATTAAGTAAGCGTT+TGG | + | chr1_1:24922179-24922198 | None:intergenic | 35.0% | |
| TATTGTGCCTGTCATATTCA+GGG | - | chr1_1:24922360-24922379 | Msa0015410:intron | 35.0% | |
| TGAAGAAAAATGTCAGTCTG+TGG | - | chr1_1:24922501-24922520 | Msa0015410:intron | 35.0% | |
| AAGTGATGTATACCACATCA+GGG | - | chr1_1:24922758-24922777 | Msa0015410:CDS | 35.0% | |
| TCTGAATGATAAATGCCGTA+TGG | - | chr1_1:24922832-24922851 | Msa0015410:CDS | 35.0% | |
| TTGTCACCAAAAGCTAACAA+TGG | + | chr1_1:24922905-24922924 | None:intergenic | 35.0% | |
| ! | GAAGAGATGAATGAGGGTTT+TGG | + | chr1_1:24916182-24916201 | None:intergenic | 40.0% |
| !! | ATTTCGAGAGGTTTCTGGTT+CGG | + | chr1_1:24916223-24916242 | None:intergenic | 40.0% |
| TGAGTTAGATGAGTGAACTC+GGG | + | chr1_1:24916271-24916290 | None:intergenic | 40.0% | |
| !! | GGAATGAGTTTTGGTGAGTT+CGG | + | chr1_1:24916345-24916364 | None:intergenic | 40.0% |
| GTTCCCATATTGAAGAGAGA+GGG | + | chr1_1:24916444-24916463 | None:intergenic | 40.0% | |
| TCCAAGCTTCAAGATATCTG+CGG | + | chr1_1:24916488-24916507 | None:intergenic | 40.0% | |
| CTCATGAGGACTGTTCTAAT+TGG | + | chr1_1:24916915-24916934 | None:intergenic | 40.0% | |
| ! | GTACTCATTTAGAATCACGG+TGG | - | chr1_1:24917034-24917053 | Msa0015410:intron | 40.0% |
| GTTTGGCTAATGCTCCAAAT+TGG | - | chr1_1:24917075-24917094 | Msa0015410:CDS | 40.0% | |
| GTTGTGATGATTCGTGTTTG+TGG | - | chr1_1:24917458-24917477 | Msa0015410:intron | 40.0% | |
| TTCGTGTTTGTGGTGAATTG+TGG | - | chr1_1:24917468-24917487 | Msa0015410:intron | 40.0% | |
| GTTGGGGATTTCACTATCTA+AGG | - | chr1_1:24917605-24917624 | Msa0015410:intron | 40.0% | |
| AGAGAATGAGTGCACATGAA+TGG | - | chr1_1:24918289-24918308 | Msa0015410:intron | 40.0% | |
| TTCTCTCACAAGAGTCAGTT+AGG | - | chr1_1:24918332-24918351 | Msa0015410:CDS | 40.0% | |
| GAATGTGTTCTGCATCAAGA+AGG | - | chr1_1:24918752-24918771 | Msa0015410:intron | 40.0% | |
| ! | AAGCATGTGTTTTGCTCCAT+TGG | - | chr1_1:24919333-24919352 | Msa0015410:intron | 40.0% |
| ATGCTAGTTGGCAAAGTCTT+TGG | + | chr1_1:24919370-24919389 | None:intergenic | 40.0% | |
| GTTGTGACCAATCACTACAT+TGG | + | chr1_1:24919441-24919460 | None:intergenic | 40.0% | |
| ACGAAATACAACACAACCAG+AGG | + | chr1_1:24919604-24919623 | None:intergenic | 40.0% | |
| ! | TGAGACTTTGCTGCATTGAT+TGG | - | chr1_1:24919637-24919656 | Msa0015410:CDS | 40.0% |
| CTTCCCAATAATCTGCTACT+TGG | + | chr1_1:24919979-24919998 | None:intergenic | 40.0% | |
| TCCATTCGAAGTGCAAATCT+TGG | - | chr1_1:24920400-24920419 | Msa0015410:intron | 40.0% | |
| CCATTCGAAGTGCAAATCTT+GGG | - | chr1_1:24920401-24920420 | Msa0015410:intron | 40.0% | |
| !! | TTGGGTTGAAAGAGCTATTC+AGG | - | chr1_1:24920419-24920438 | Msa0015410:intron | 40.0% |
| ATGTAGGGATACTAAGCCAA+TGG | - | chr1_1:24920570-24920589 | Msa0015410:intron | 40.0% | |
| !!! | CCGTTTCTTTTTTGAGGTCT+TGG | + | chr1_1:24920665-24920684 | None:intergenic | 40.0% |
| TGCTTACCATAACATCACAG+AGG | + | chr1_1:24920804-24920823 | None:intergenic | 40.0% | |
| !! | ATATACTCAGGTTGAAGGCT+TGG | - | chr1_1:24921127-24921146 | Msa0015410:intron | 40.0% |
| ATAATTCATCCGACAGGAAG+AGG | + | chr1_1:24921312-24921331 | None:intergenic | 40.0% | |
| !!! | GAAAAGAGTGCTTTTGACAC+GGG | - | chr1_1:24921368-24921387 | Msa0015410:intron | 40.0% |
| TCAAGGAACTCTTATGGAGT+AGG | - | chr1_1:24921573-24921592 | Msa0015410:CDS | 40.0% | |
| ACAGCAAAGACAAACTTTCC+AGG | + | chr1_1:24921699-24921718 | None:intergenic | 40.0% | |
| ATGCAAAAAATGAGCTAGGG+AGG | + | chr1_1:24921768-24921787 | None:intergenic | 40.0% | |
| !!! | TCCCTAGCTCATTTTTTGCA+TGG | - | chr1_1:24921767-24921786 | Msa0015410:intron | 40.0% |
| CACCATGCAAAAAATGAGCT+AGG | + | chr1_1:24921772-24921791 | None:intergenic | 40.0% | |
| !!! | CTAGCTCATTTTTTGCATGG+TGG | - | chr1_1:24921770-24921789 | Msa0015410:intron | 40.0% |
| GATGCACAAAATGCAATGGA+AGG | - | chr1_1:24921917-24921936 | Msa0015410:intron | 40.0% | |
| ATAGCCTCTTCAGTTGAAAG+TGG | + | chr1_1:24921955-24921974 | None:intergenic | 40.0% | |
| TGGACTGTCACCAACTTTAT+TGG | - | chr1_1:24922046-24922065 | Msa0015410:intron | 40.0% | |
| GGACTGTCACCAACTTTATT+GGG | - | chr1_1:24922047-24922066 | Msa0015410:intron | 40.0% | |
| GTGAAAAAGGGGAATTCGTT+TGG | + | chr1_1:24922238-24922257 | None:intergenic | 40.0% | |
| GTATTGTGCCTGTCATATTC+AGG | - | chr1_1:24922359-24922378 | Msa0015410:intron | 40.0% | |
| CTGTACTGCATTATGGTACT+GGG | + | chr1_1:24922388-24922407 | None:intergenic | 40.0% | |
| TCTGTACTGCATTATGGTAC+TGG | + | chr1_1:24922389-24922408 | None:intergenic | 40.0% | |
| CGAACTTCTGTACTGCATTA+TGG | + | chr1_1:24922395-24922414 | None:intergenic | 40.0% | |
| TCGTCTGCGGTTTAATGTAA+TGG | - | chr1_1:24922645-24922664 | Msa0015410:CDS | 40.0% | |
| AAGCAACAACAGTTGAGAGA+AGG | + | chr1_1:24922704-24922723 | None:intergenic | 40.0% | |
| GAAGTGATGTATACCACATC+AGG | - | chr1_1:24922757-24922776 | Msa0015410:CDS | 40.0% | |
| TCTTCAAGTAATCCCTGATG+TGG | + | chr1_1:24922773-24922792 | None:intergenic | 40.0% | |
| AAAAGCTAACAATGGCTGAG+TGG | + | chr1_1:24922897-24922916 | None:intergenic | 40.0% | |
| !!! | ACTCAGCCATTGTTAGCTTT+TGG | - | chr1_1:24922896-24922915 | Msa0015410:exon | 40.0% |
| GAAGGGGAAGAGATGAATGA+GGG | + | chr1_1:24916188-24916207 | None:intergenic | 45.0% | |
| TGAAGGGGAAGAGATGAATG+AGG | + | chr1_1:24916189-24916208 | None:intergenic | 45.0% | |
| TCATCTCTTCCCCTTCAACA+TGG | - | chr1_1:24916192-24916211 | Msa0015410:three_prime_UTR | 45.0% | |
| TTCGGTGGATCCATGTTGAA+GGG | + | chr1_1:24916205-24916224 | None:intergenic | 45.0% | |
| ! | AGTGGATTTCGAGAGGTTTC+TGG | + | chr1_1:24916228-24916247 | None:intergenic | 45.0% |
| TTAACTCAAACCTCCCTCGT+CGG | - | chr1_1:24916295-24916314 | Msa0015410:three_prime_UTR | 45.0% | |
| !! | TGAGTTTTGGTGAGTTCGGA+CGG | + | chr1_1:24916341-24916360 | None:intergenic | 45.0% |
| CCATATTGAAGAGAGAGGGA+GGG | + | chr1_1:24916440-24916459 | None:intergenic | 45.0% | |
| CCTCCCTCTCTCTTCAATAT+GGG | - | chr1_1:24916438-24916457 | Msa0015410:three_prime_UTR | 45.0% | |
| GGTTCCCATATTGAAGAGAG+AGG | + | chr1_1:24916445-24916464 | None:intergenic | 45.0% | |
| TCCGCAGATATCTTGAAGCT+TGG | - | chr1_1:24916484-24916503 | Msa0015410:three_prime_UTR | 45.0% | |
| TGTGAACAAGGATGCAATCC+CGG | - | chr1_1:24916550-24916569 | Msa0015410:three_prime_UTR | 45.0% | |
| ATGCAATCCCGGTTTCGATA+AGG | - | chr1_1:24916561-24916580 | Msa0015410:three_prime_UTR | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr1_1:24916931-24916950 | Msa0015410:intron | 45.0% |
| !!! | CTTTTTTTTTGTGGTGGCCG+GGG | + | chr1_1:24916997-24917016 | None:intergenic | 45.0% |
| !!! | GCTTTTTTTTTGTGGTGGCC+GGG | + | chr1_1:24916998-24917017 | None:intergenic | 45.0% |
| !!! | GGCTTTTTTTTTGTGGTGGC+CGG | + | chr1_1:24916999-24917018 | None:intergenic | 45.0% |
| TAGCCAAACGCACAATAGGT+GGG | + | chr1_1:24917064-24917083 | None:intergenic | 45.0% | |
| TTAGCCAAACGCACAATAGG+TGG | + | chr1_1:24917065-24917084 | None:intergenic | 45.0% | |
| GCATTAGCCAAACGCACAAT+AGG | + | chr1_1:24917068-24917087 | None:intergenic | 45.0% | |
| CTCAACTATGAGTTCGATCG+AGG | + | chr1_1:24917254-24917273 | None:intergenic | 45.0% | |
| GTTTGTGGTGAATTGTGGAC+AGG | - | chr1_1:24917473-24917492 | Msa0015410:intron | 45.0% | |
| ! | TGGACAGGTTGAACCGTATT+TGG | - | chr1_1:24917488-24917507 | Msa0015410:intron | 45.0% |
| ! | ACATGTGATGGTGAAACTGC+CGG | - | chr1_1:24918406-24918425 | Msa0015410:CDS | 45.0% |
| AGTCAGTCACTATTCAGACC+TGG | + | chr1_1:24918554-24918573 | None:intergenic | 45.0% | |
| CTGAATAGTGACTGACTGCA+AGG | - | chr1_1:24918557-24918576 | Msa0015410:CDS | 45.0% | |
| AATGCTGCCAACATAAGGAC+TGG | - | chr1_1:24918953-24918972 | Msa0015410:intron | 45.0% | |
| AGGAGCTCCAATGTAGTGAT+TGG | - | chr1_1:24919431-24919450 | Msa0015410:intron | 45.0% | |
| ! | GTCATCTGGTCTTCTGTAAG+AGG | + | chr1_1:24919466-24919485 | None:intergenic | 45.0% |
| CCATAGCTGCATATGTCATC+TGG | + | chr1_1:24919480-24919499 | None:intergenic | 45.0% | |
| CCAGATGACATATGCAGCTA+TGG | - | chr1_1:24919477-24919496 | Msa0015410:intron | 45.0% | |
| ATGGATGCTCATTGCTTGCT+CGG | - | chr1_1:24919496-24919515 | Msa0015410:intron | 45.0% | |
| CTGGACAAACTATAGACCTC+TGG | - | chr1_1:24919585-24919604 | Msa0015410:CDS | 45.0% | |
| CCCAAGATTTGCACTTCGAA+TGG | + | chr1_1:24920404-24920423 | None:intergenic | 45.0% | |
| TTCAGGTGATACCTTCAGCA+GGG | - | chr1_1:24920527-24920546 | Msa0015410:intron | 45.0% | |
| ! | TCTCTGGGAAGCCCATTAAT+TGG | + | chr1_1:24920700-24920719 | None:intergenic | 45.0% |
| GAGAACTTTGATGAGTGGCA+AGG | - | chr1_1:24920730-24920749 | Msa0015410:intron | 45.0% | |
| AACTATTGGATCCCAAGGTG+CGG | + | chr1_1:24920758-24920777 | None:intergenic | 45.0% | |
| CACCTTGGGATCCAATAGTT+GGG | - | chr1_1:24920758-24920777 | Msa0015410:intron | 45.0% | |
| ACCTTGGGATCCAATAGTTG+GGG | - | chr1_1:24920759-24920778 | Msa0015410:intron | 45.0% | |
| TATCCATCTCCCCCAACTAT+TGG | + | chr1_1:24920772-24920791 | None:intergenic | 45.0% | |
| ! | GGTTCAGGCTTCTTTGAAGA+AGG | + | chr1_1:24921191-24921210 | None:intergenic | 45.0% |
| CTTCAAAGAAGCCTGAACCA+AGG | - | chr1_1:24921192-24921211 | Msa0015410:intron | 45.0% | |
| AATGTGCTCCCTGCTCATAA+CGG | - | chr1_1:24921627-24921646 | Msa0015410:intron | 45.0% | |
| ! | GAAGCCACTTTCAACTGAAG+AGG | - | chr1_1:24921948-24921967 | Msa0015410:intron | 45.0% |
| AGAGGCTATTGAAGCTGCAA+AGG | - | chr1_1:24921966-24921985 | Msa0015410:intron | 45.0% | |
| GAGGCTATTGAAGCTGCAAA+GGG | - | chr1_1:24921967-24921986 | Msa0015410:intron | 45.0% | |
| CTGTCACCAACTTTATTGGG+AGG | - | chr1_1:24922050-24922069 | Msa0015410:intron | 45.0% | |
| CAACTCGCAACAAACTGAAC+AGG | + | chr1_1:24922085-24922104 | None:intergenic | 45.0% | |
| AAGGATGTGCACGTGAGTAA+TGG | - | chr1_1:24922457-24922476 | Msa0015410:intron | 45.0% | |
| AAGGATGTGCACGTGAGTAA+TGG | - | chr1_1:24922457-24922476 | Msa0015410:intron | 45.0% | |
| TCGGTGGATCCATGTTGAAG+GGG | + | chr1_1:24916204-24916223 | None:intergenic | 50.0% | |
| ! | GTTCGGTGGATCCATGTTGA+AGG | + | chr1_1:24916206-24916225 | None:intergenic | 50.0% |
| ! | GTGACGAAGTGGATTTCGAG+AGG | + | chr1_1:24916235-24916254 | None:intergenic | 50.0% |
| ATGAGTGAACTCGGGTGAGT+CGG | + | chr1_1:24916263-24916282 | None:intergenic | 50.0% | |
| ! | GACGAGGGAGGTTTGAGTTA+AGG | + | chr1_1:24916296-24916315 | None:intergenic | 50.0% |
| !! | GAGTTTTGGTGAGTTCGGAC+GGG | + | chr1_1:24916340-24916359 | None:intergenic | 50.0% |
| ! | AGACGGTGGGGAATGAGTTT+TGG | + | chr1_1:24916354-24916373 | None:intergenic | 50.0% |
| ATTTGGAGGAGTGAGACGGT+GGG | + | chr1_1:24916367-24916386 | None:intergenic | 50.0% | |
| CTCCAAATCGCGTGTCAACT+CGG | - | chr1_1:24916379-24916398 | Msa0015410:three_prime_UTR | 50.0% | |
| AAGAGAGAGGGAGGGAGATA+AGG | + | chr1_1:24916432-24916451 | None:intergenic | 50.0% | |
| CCCTCCCTCTCTCTTCAATA+TGG | - | chr1_1:24916437-24916456 | Msa0015410:three_prime_UTR | 50.0% | |
| CCCATATTGAAGAGAGAGGG+AGG | + | chr1_1:24916441-24916460 | None:intergenic | 50.0% | |
| GAAACCAGCATTTCTCGGAG+AGG | + | chr1_1:24916466-24916485 | None:intergenic | 50.0% | |
| CTGCGGAAACCAGCATTTCT+CGG | + | chr1_1:24916471-24916490 | None:intergenic | 50.0% | |
| CCAACTGAGCTAAGCTCATG+AGG | + | chr1_1:24916929-24916948 | None:intergenic | 50.0% | |
| CCTCATGAGCTTAGCTCAGT+TGG | - | chr1_1:24916926-24916945 | Msa0015410:intron | 50.0% | |
| TACCCCACCTATTGTGCGTT+TGG | - | chr1_1:24917058-24917077 | Msa0015410:CDS | 50.0% | |
| AGCCAAACGCACAATAGGTG+GGG | + | chr1_1:24917063-24917082 | None:intergenic | 50.0% | |
| GTATACATTCTCGCGTCCCA+AGG | + | chr1_1:24917128-24917147 | None:intergenic | 50.0% | |
| ATTCTACGCTGCAGGAGAGT+TGG | - | chr1_1:24920357-24920376 | Msa0015410:intron | 50.0% | |
| GTTCAGGTGATACCTTCAGC+AGG | - | chr1_1:24920526-24920545 | Msa0015410:intron | 50.0% | |
| TCAGGTGATACCTTCAGCAG+GGG | - | chr1_1:24920528-24920547 | Msa0015410:intron | 50.0% | |
| GCACCTTGGGATCCAATAGT+TGG | - | chr1_1:24920757-24920776 | Msa0015410:intron | 50.0% | |
| CCTTGGGATCCAATAGTTGG+GGG | - | chr1_1:24920760-24920779 | Msa0015410:intron | 50.0% | |
| GATCCAATAGTTGGGGGAGA+TGG | - | chr1_1:24920766-24920785 | Msa0015410:intron | 50.0% | |
| ATGTGCTCCCTGCTCATAAC+GGG | - | chr1_1:24921628-24921647 | Msa0015410:intron | 50.0% | |
| ACTCTAGCCCGTTATGAGCA+GGG | + | chr1_1:24921638-24921657 | None:intergenic | 50.0% | |
| AACTCTAGCCCGTTATGAGC+AGG | + | chr1_1:24921639-24921658 | None:intergenic | 50.0% | |
| CTGGGTTCCCTGAATATGAC+AGG | + | chr1_1:24922370-24922389 | None:intergenic | 50.0% | |
| !! | TCGAGAGGTTTCTGGTTCGG+TGG | + | chr1_1:24916220-24916239 | None:intergenic | 55.0% |
| ! | AGTTCGGACGGGTTTCCACT+CGG | + | chr1_1:24916329-24916348 | None:intergenic | 55.0% |
| TTTGGAGGAGTGAGACGGTG+GGG | + | chr1_1:24916366-24916385 | None:intergenic | 55.0% | |
| GATTTGGAGGAGTGAGACGG+TGG | + | chr1_1:24916368-24916387 | None:intergenic | 55.0% | |
| ! | CGCGATTTGGAGGAGTGAGA+CGG | + | chr1_1:24916371-24916390 | None:intergenic | 55.0% |
| ! | CGAGTTGACACGCGATTTGG+AGG | + | chr1_1:24916381-24916400 | None:intergenic | 55.0% |
| GGAACCTCTCCGAGAAATGC+TGG | - | chr1_1:24916459-24916478 | Msa0015410:three_prime_UTR | 55.0% | |
| AAAGTCCGGGGTTCAAACCC+CGG | - | chr1_1:24916977-24916996 | Msa0015410:intron | 55.0% | |
| TGAATCACTGCCCCTGCTGA+AGG | + | chr1_1:24920541-24920560 | None:intergenic | 55.0% | |
| CCCCCAACTATTGGATCCCA+AGG | + | chr1_1:24920763-24920782 | None:intergenic | 55.0% | |
| ! | AGTCGGTGGTGGTGACGAAG+TGG | + | chr1_1:24916246-24916265 | None:intergenic | 60.0% |
| AGTGAACTCGGGTGAGTCGG+TGG | + | chr1_1:24916260-24916279 | None:intergenic | 60.0% | |
| ! | CGCCGAGTTGACACGCGATT+TGG | + | chr1_1:24916384-24916403 | None:intergenic | 60.0% |
| GGAGGGAGATAAGGTCGAGG+AGG | + | chr1_1:24916423-24916442 | None:intergenic | 60.0% | |
| GAGGGAGGGAGATAAGGTCG+AGG | + | chr1_1:24916426-24916445 | None:intergenic | 60.0% | |
| !! | AGTGGCAAGGTACCGCACCT+TGG | - | chr1_1:24920743-24920762 | Msa0015410:intron | 60.0% |
| !! | GTGGCAAGGTACCGCACCTT+GGG | - | chr1_1:24920744-24920763 | Msa0015410:intron | 60.0% |
| ! | CGGGCTAGAGTTTGAGCCCA+TGG | - | chr1_1:24921647-24921666 | Msa0015410:intron | 60.0% |
| GAACTCGGGTGAGTCGGTGG+TGG | + | chr1_1:24916257-24916276 | None:intergenic | 65.0% | |
| CAGGCAACGGCTGCCGAAGA+AGG | - | chr1_1:24919535-24919554 | Msa0015410:intron | 65.0% | |
| ! | CTCGGCGTCGAGTCCGACGA+GGG | + | chr1_1:24916311-24916330 | None:intergenic | 70.0% |
| ! | ACTCGGCGTCGAGTCCGACG+AGG | + | chr1_1:24916312-24916331 | None:intergenic | 70.0% |
| TCGTCGGACTCGACGCCGAG+TGG | - | chr1_1:24916311-24916330 | Msa0015410:three_prime_UTR | 70.0% | |
| GGTGGCCGGGGTTTGAACCC+CGG | + | chr1_1:24916985-24917004 | None:intergenic | 70.0% | |
| ! | GGCGTCGAGTCCGACGAGGG+AGG | + | chr1_1:24916308-24916327 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 24916134 | 24922973 | 24916134 | ID=Msa0015410;Name=Msa0015410 |
| chr1_1 | mRNA | 24916134 | 24922973 | 24916134 | ID=Msa0015410-mRNA-1;Parent=Msa0015410;Name=Msa0015410-mRNA-1;_AED=0.15;_eAED=0.15;_QI=77|1|1|1|1|1|8|530|513 |
| chr1_1 | exon | 24916134 | 24916726 | 24916134 | ID=Msa0015410-mRNA-1:exon:8591;Parent=Msa0015410-mRNA-1 |
| chr1_1 | exon | 24917036 | 24917239 | 24917036 | ID=Msa0015410-mRNA-1:exon:8590;Parent=Msa0015410-mRNA-1 |
| chr1_1 | exon | 24917643 | 24917766 | 24917643 | ID=Msa0015410-mRNA-1:exon:8589;Parent=Msa0015410-mRNA-1 |
| chr1_1 | exon | 24917894 | 24917970 | 24917894 | ID=Msa0015410-mRNA-1:exon:8588;Parent=Msa0015410-mRNA-1 |
| chr1_1 | exon | 24918291 | 24918736 | 24918291 | ID=Msa0015410-mRNA-1:exon:8587;Parent=Msa0015410-mRNA-1 |
| chr1_1 | exon | 24919551 | 24919674 | 24919551 | ID=Msa0015410-mRNA-1:exon:8586;Parent=Msa0015410-mRNA-1 |
| chr1_1 | exon | 24921481 | 24921612 | 24921481 | ID=Msa0015410-mRNA-1:exon:8585;Parent=Msa0015410-mRNA-1 |
| chr1_1 | exon | 24922525 | 24922973 | 24922525 | ID=Msa0015410-mRNA-1:exon:8584;Parent=Msa0015410-mRNA-1 |
| chr1_1 | five_prime_UTR | 24922897 | 24922973 | 24922897 | ID=Msa0015410-mRNA-1:five_prime_utr;Parent=Msa0015410-mRNA-1 |
| chr1_1 | CDS | 24922525 | 24922896 | 24922525 | ID=Msa0015410-mRNA-1:cds;Parent=Msa0015410-mRNA-1 |
| chr1_1 | CDS | 24921481 | 24921612 | 24921481 | ID=Msa0015410-mRNA-1:cds;Parent=Msa0015410-mRNA-1 |
| chr1_1 | CDS | 24919551 | 24919674 | 24919551 | ID=Msa0015410-mRNA-1:cds;Parent=Msa0015410-mRNA-1 |
| chr1_1 | CDS | 24918291 | 24918736 | 24918291 | ID=Msa0015410-mRNA-1:cds;Parent=Msa0015410-mRNA-1 |
| chr1_1 | CDS | 24917894 | 24917970 | 24917894 | ID=Msa0015410-mRNA-1:cds;Parent=Msa0015410-mRNA-1 |
| chr1_1 | CDS | 24917643 | 24917766 | 24917643 | ID=Msa0015410-mRNA-1:cds;Parent=Msa0015410-mRNA-1 |
| chr1_1 | CDS | 24917036 | 24917239 | 24917036 | ID=Msa0015410-mRNA-1:cds;Parent=Msa0015410-mRNA-1 |
| chr1_1 | CDS | 24916664 | 24916726 | 24916664 | ID=Msa0015410-mRNA-1:cds;Parent=Msa0015410-mRNA-1 |
| chr1_1 | three_prime_UTR | 24916134 | 24916663 | 24916134 | ID=Msa0015410-mRNA-1:three_prime_utr;Parent=Msa0015410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
