Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160280 | XP_024630954.1 | 97.852 | 512 | 11 | 0 | 1 | 512 | 1 | 512 | 0.0 | 1042 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160280 | sp|Q179T2|MUT7_AEDAE | 27.907 | 215 | 133 | 8 | 2 | 203 | 420 | 625 | 2.46e-14 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160280 | A0A396JEN7 | 97.852 | 512 | 11 | 0 | 1 | 512 | 1 | 512 | 0.0 | 1042 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015410 | Msa0160280 | 0.874340 | 7.289634e-68 | -8.615850e-47 |
| Msa0043110 | Msa0160280 | 0.805182 | 1.510216e-49 | -8.615850e-47 |
| Msa0043140 | Msa0160280 | 0.805707 | 1.171999e-49 | -8.615850e-47 |
| Msa0160180 | Msa0160280 | 0.880648 | 4.618328e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160280 | MtrunA17_Chr1g0146721 | 97.852 | 512 | 11 | 0 | 1 | 512 | 1 | 512 | 0.0 | 1042 |
| Msa0160280 | MtrunA17_Chr1g0192551 | 34.831 | 178 | 94 | 5 | 26 | 200 | 366 | 524 | 1.22e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160280 | AT5G24340.1 | 61.840 | 511 | 178 | 5 | 9 | 512 | 5 | 505 | 0.0 | 618 |
| Msa0160280 | AT5G24340.2 | 61.179 | 492 | 174 | 5 | 9 | 493 | 5 | 486 | 0.0 | 582 |
| Msa0160280 | AT1G56310.2 | 34.426 | 183 | 98 | 5 | 21 | 200 | 367 | 530 | 1.95e-19 | 92.0 |
| Msa0160280 | AT1G56310.1 | 34.426 | 183 | 98 | 5 | 21 | 200 | 367 | 530 | 1.95e-19 | 92.0 |
Find 146 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGAATATTTAAGGTCTTTC+AGG | 0.172278 | 1_4:-32335975 | Msa0160280:CDS |
| TTGCTTGCTCGGAATATTTA+AGG | 0.172649 | 1_4:-32335984 | Msa0160280:CDS |
| TGGACTGTCACCAACTTTAT+TGG | 0.183295 | 1_4:-32333445 | Msa0160280:CDS |
| TGGACAGGTTGAACCGTATT+TGG | 0.193079 | 1_4:-32338003 | Msa0160280:intron |
| CCCTCCCTCTCTCTTCAATA+TGG | 0.225431 | 1_4:-32339052 | Msa0160280:CDS |
| AGTGGATTTCGAGAGGTTTC+TGG | 0.243426 | 1_4:+32339264 | None:intergenic |
| TTCTTGTTAAATAAGCAATT+TGG | 0.256042 | 1_4:+32333488 | None:intergenic |
| AAGAAGCAGTTGCCAATTAA+TGG | 0.266519 | 1_4:-32334806 | Msa0160280:CDS |
| GTTGGGGATTTCACTATCTA+AGG | 0.266528 | 1_4:-32337886 | Msa0160280:intron |
| ACTCAGCCATTGTTAGCTTT+TGG | 0.273099 | 1_4:-32332612 | Msa0160280:three_prime_UTR |
| TCTCTGGGAAGCCCATTAAT+TGG | 0.275370 | 1_4:+32334794 | None:intergenic |
| TTGGGTTGAAAGAGCTATTC+AGG | 0.279184 | 1_4:-32335072 | Msa0160280:CDS |
| TTAACAAGAATTTAGAGTTT+TGG | 0.282841 | 1_4:-32333475 | Msa0160280:CDS |
| TTCTTGTTCTGATGTTGTTC+AGG | 0.290742 | 1_4:-32334981 | Msa0160280:CDS |
| CGAACTTCTGTACTGCATTA+TGG | 0.303283 | 1_4:+32333116 | None:intergenic |
| CGCCGAGTTGACACGCGATT+TGG | 0.332673 | 1_4:+32339108 | None:intergenic |
| GAAGAGATGAATGAGGGTTT+TGG | 0.342950 | 1_4:+32339310 | None:intergenic |
| AATTGGGGAAAGATATTAAC+TGG | 0.343664 | 1_4:+32332550 | None:intergenic |
| ACTTCGAATGGATAATCTAT+TGG | 0.346561 | 1_4:+32335102 | None:intergenic |
| TTCAAAGACAACGTATTTAG+TGG | 0.347954 | 1_4:+32332838 | None:intergenic |
| GGACTGTCACCAACTTTATT+GGG | 0.348017 | 1_4:-32333444 | Msa0160280:CDS |
| TCCGTTGAAATTAAATAGTT+AGG | 0.353808 | 1_4:+32332772 | None:intergenic |
| CGACGAGGGAGGTTTGAGTT+AGG | 0.362587 | 1_4:+32339195 | None:intergenic |
| TCCATTCGAAGTGCAAATCT+TGG | 0.365006 | 1_4:-32335091 | Msa0160280:CDS |
| GATCTTCGTTAATATTTAGT+TGG | 0.370178 | 1_4:+32333609 | None:intergenic |
| TCTGTACTGCATTATGGTAC+TGG | 0.375544 | 1_4:+32333122 | None:intergenic |
| AGAAGCAGTTGCCAATTAAT+GGG | 0.394347 | 1_4:-32334805 | Msa0160280:CDS |
| AGACGGTGGGGAATGAGTTT+TGG | 0.396979 | 1_4:+32339138 | None:intergenic |
| AATTCAAACCTTATCGAAAC+CGG | 0.401870 | 1_4:+32338920 | None:intergenic |
| CAAAACATTTACGTTGTGTT+GGG | 0.402928 | 1_4:-32334341 | Msa0160280:CDS |
| ACTATTTGTGGAGAATTGTT+GGG | 0.403644 | 1_4:-32337903 | Msa0160280:CDS |
| AAGAGTTTGTCAACTATTTG+TGG | 0.413650 | 1_4:-32337915 | Msa0160280:CDS |
| GTTAACTATAGGAGAAGAAA+TGG | 0.419067 | 1_4:+32339335 | None:intergenic |
| CACCTTGGGATCCAATAGTT+GGG | 0.419800 | 1_4:-32334733 | Msa0160280:CDS |
| TTTGAGTTAGGGAACGAGTT+AGG | 0.421933 | 1_4:+32339207 | None:intergenic |
| AAGAGAGAGGGAGGGAGATA+AGG | 0.425681 | 1_4:+32339060 | None:intergenic |
| TTGTCAGAAAACATGGTGAT+AGG | 0.426512 | 1_4:-32334880 | Msa0160280:CDS |
| AACTATTTGTGGAGAATTGT+TGG | 0.431111 | 1_4:-32337904 | Msa0160280:CDS |
| CAGGCAACGGTTGCCGAAGA+AGG | 0.435285 | 1_4:-32335956 | Msa0160280:intron |
| ATACTCTATTACCTTGGTTC+AGG | 0.437955 | 1_4:+32334288 | None:intergenic |
| GAAGTGATGTATACCACATC+AGG | 0.441192 | 1_4:-32332751 | Msa0160280:three_prime_UTR |
| CCATAGCTGCATATGTCATC+TGG | 0.441623 | 1_4:+32336014 | None:intergenic |
| GGTTCAGGCTTCTTTGAAGA+AGG | 0.443658 | 1_4:+32334303 | None:intergenic |
| AGGAGCTCCAATGTAGTGAT+TGG | 0.446279 | 1_4:-32336060 | Msa0160280:CDS |
| CCTCCCTCTCTCTTCAATAT+GGG | 0.447072 | 1_4:-32339051 | Msa0160280:CDS |
| ATTTCGAGAGGTTTCTGGTT+CGG | 0.449245 | 1_4:+32339269 | None:intergenic |
| GTCATCTGGTCTTCTGTAAG+AGG | 0.455188 | 1_4:+32336028 | None:intergenic |
| CCATTCGAAGTGCAAATCTT+GGG | 0.457879 | 1_4:-32335090 | Msa0160280:CDS |
| CTGTACTGCATTATGGTACT+GGG | 0.458731 | 1_4:+32333123 | None:intergenic |
| GCACCTTGGGATCCAATAGT+TGG | 0.460032 | 1_4:-32334734 | Msa0160280:CDS |
| AAAGTTCCTCTGTGATGTTA+TGG | 0.461542 | 1_4:-32334696 | Msa0160280:intron |
| CTGCGGAAACCAGCATTTCT+CGG | 0.462154 | 1_4:+32339021 | None:intergenic |
| ATAACATCACAGAGGAACTT+TGG | 0.466771 | 1_4:+32334698 | None:intergenic |
| CCCAAGATTTGCACTTCGAA+TGG | 0.470113 | 1_4:+32335090 | None:intergenic |
| ATGCAATCCCGGTTTCGATA+AGG | 0.470492 | 1_4:-32338928 | Msa0160280:intron |
| TCCGCAGATATCTTGAAGCT+TGG | 0.472276 | 1_4:-32339005 | Msa0160280:CDS |
| GCAAAACATTTACGTTGTGT+TGG | 0.472670 | 1_4:-32334342 | Msa0160280:CDS |
| GTGGCAAGGTACCGCACCTT+GGG | 0.474336 | 1_4:-32334747 | Msa0160280:CDS |
| ACGAGTTAGGTGAGTGAACT+CGG | 0.479955 | 1_4:+32339220 | None:intergenic |
| ATATACTCAGGTTGAAGGCT+TGG | 0.480503 | 1_4:-32334364 | Msa0160280:intron |
| GTTCAGGTGATACCTTCAGC+AGG | 0.480716 | 1_4:-32334965 | Msa0160280:CDS |
| TCGTCTGCGGTTTAATGTAA+TGG | 0.487271 | 1_4:-32332863 | Msa0160280:three_prime_UTR |
| ATTCTACGCTGCAGGAGAGT+TGG | 0.488155 | 1_4:-32335134 | Msa0160280:intron |
| GTTCGGTGGATCCATGTTGA+AGG | 0.490687 | 1_4:+32339286 | None:intergenic |
| GACGAGGGAGGTTTGAGTTA+GGG | 0.492859 | 1_4:+32339196 | None:intergenic |
| AAGGAATATACTCAGGTTGA+AGG | 0.492962 | 1_4:-32334369 | Msa0160280:intron |
| ACCTAACTATTTAATTTCAA+CGG | 0.494693 | 1_4:-32332773 | Msa0160280:three_prime_UTR |
| ATGGATGCTCATTGCTTGCT+CGG | 0.498298 | 1_4:-32335995 | Msa0160280:CDS |
| ACAATACCTCCCAATAAAGT+TGG | 0.500595 | 1_4:+32333435 | None:intergenic |
| ATTGCATCCTTGTTCACAAA+AGG | 0.500679 | 1_4:+32338944 | None:intergenic |
| TGTGAACAAGGATGCAATCC+CGG | 0.506138 | 1_4:-32338939 | Msa0160280:CDS |
| CCAGATGACATATGCAGCTA+TGG | 0.508239 | 1_4:-32336014 | Msa0160280:CDS |
| GGAACCTCTCCGAGAAATGC+TGG | 0.508729 | 1_4:-32339030 | Msa0160280:CDS |
| ATAGCCTCTTCAGTTGAAAG+TGG | 0.510202 | 1_4:+32333539 | None:intergenic |
| TGAATCACTGCCCCTGCTGA+AGG | 0.517305 | 1_4:+32334953 | None:intergenic |
| CGAGTTGACACGCGATTTGG+AGG | 0.530138 | 1_4:+32339111 | None:intergenic |
| TTCAATGGAAATGTATTCAG+TGG | 0.535048 | 1_4:+32333026 | None:intergenic |
| AGTTCGGACGGGTTTCCACT+CGG | 0.540037 | 1_4:+32339163 | None:intergenic |
| GAGGGAGGGAGATAAGGTCG+AGG | 0.541400 | 1_4:+32339066 | None:intergenic |
| ATTTAAGGTCTTTCAGGCAA+CGG | 0.542045 | 1_4:-32335969 | Msa0160280:CDS |
| GAGGCTATTGAAGCTGCAAA+GGG | 0.542175 | 1_4:-32333524 | Msa0160280:CDS |
| TCGAGAGGTTTCTGGTTCGG+TGG | 0.543537 | 1_4:+32339272 | None:intergenic |
| CTATTTGTGGAGAATTGTTG+GGG | 0.548719 | 1_4:-32337902 | Msa0160280:CDS |
| TGAAGGGGAAGAGATGAATG+AGG | 0.551284 | 1_4:+32339303 | None:intergenic |
| TTTAAAGGAATTGTATTCAG+TGG | 0.552369 | 1_4:+32332894 | None:intergenic |
| AGTGGCAAGGTACCGCACCT+TGG | 0.553048 | 1_4:-32334748 | Msa0160280:CDS |
| AGAGGCTATTGAAGCTGCAA+AGG | 0.553698 | 1_4:-32333525 | Msa0160280:CDS |
| GAAGCCACTTTCAACTGAAG+AGG | 0.554381 | 1_4:-32333543 | Msa0160280:CDS |
| GAAGGGGAAGAGATGAATGA+GGG | 0.558624 | 1_4:+32339304 | None:intergenic |
| TGATTCAAAAGTCATCATGT+AGG | 0.563710 | 1_4:-32334937 | Msa0160280:CDS |
| TTAAACAAATTGCATCCATA+CGG | 0.563825 | 1_4:+32332661 | None:intergenic |
| TTGAAAATTGTCAGAAAACA+TGG | 0.565414 | 1_4:-32334887 | Msa0160280:CDS |
| TTCGGTGGATCCATGTTGAA+GGG | 0.566857 | 1_4:+32339287 | None:intergenic |
| GTGAGTGAACTCGGGTGAGT+CGG | 0.567429 | 1_4:+32339229 | None:intergenic |
| GATTCAAAAGTCATCATGTA+GGG | 0.569974 | 1_4:-32334936 | Msa0160280:CDS |
| GATTAATTTAAACTTCGTCA+AGG | 0.571624 | 1_4:-32333070 | Msa0160280:exon |
| TCATCTCTTCCCCTTCAACA+TGG | 0.572456 | 1_4:-32339297 | Msa0160280:exon |
| CCCATATTGAAGAGAGAGGG+AGG | 0.572831 | 1_4:+32339051 | None:intergenic |
| GGAGGGAGATAAGGTCGAGG+AGG | 0.575742 | 1_4:+32339069 | None:intergenic |
| TCAAGATGCACAAAATGCAA+TGG | 0.575984 | 1_4:-32333578 | Msa0160280:CDS |
| ACACTCGTAATATCCAAATA+CGG | 0.580297 | 1_4:+32337990 | None:intergenic |
| ATTTAGAGAACTTTGATGAG+TGG | 0.582031 | 1_4:-32334766 | Msa0160280:CDS |
| ACCTTGGGATCCAATAGTTG+GGG | 0.583139 | 1_4:-32334732 | Msa0160280:CDS |
| ATGTAGGGATACTAAGCCAA+TGG | 0.584459 | 1_4:-32334921 | Msa0160280:CDS |
| ATTCAAACCTTATCGAAACC+GGG | 0.584714 | 1_4:+32338921 | None:intergenic |
| AGTGAACTCGGGTGAGTCGG+TGG | 0.585940 | 1_4:+32339232 | None:intergenic |
| CTCCAAATCGCGTGTCAACT+CGG | 0.589593 | 1_4:-32339110 | Msa0160280:CDS |
| ATTTGGAGGAGTGAGACGGT+GGG | 0.590066 | 1_4:+32339125 | None:intergenic |
| GATTAATTTAAACTTCGTCA+AGG | 0.591089 | 1_4:-32332938 | Msa0160280:three_prime_UTR |
| GAGAACTTTGATGAGTGGCA+AGG | 0.591373 | 1_4:-32334761 | Msa0160280:CDS |
| GATTTGGAGGAGTGAGACGG+TGG | 0.592283 | 1_4:+32339124 | None:intergenic |
| TTCAGGTGATACCTTCAGCA+GGG | 0.596087 | 1_4:-32334964 | Msa0160280:CDS |
| CGAGTTAGGTGAGTGAACTC+GGG | 0.599637 | 1_4:+32339221 | None:intergenic |
| CTGTCACCAACTTTATTGGG+AGG | 0.600563 | 1_4:-32333441 | Msa0160280:intron |
| GTTGTGACCAATCACTACAT+TGG | 0.602180 | 1_4:+32336053 | None:intergenic |
| GTTCCCATATTGAAGAGAGA+GGG | 0.604804 | 1_4:+32339048 | None:intergenic |
| GATGCACAAAATGCAATGGA+AGG | 0.607518 | 1_4:-32333574 | Msa0160280:CDS |
| GGTTCCCATATTGAAGAGAG+AGG | 0.608783 | 1_4:+32339047 | None:intergenic |
| TCGTCGGACTCGACGCCGAG+TGG | 0.612313 | 1_4:-32339178 | Msa0160280:CDS |
| GTGACGAAGTGGATTTCGAG+AGG | 0.612730 | 1_4:+32339257 | None:intergenic |
| CAGCAACAACAGTTGAGAGA+AGG | 0.613102 | 1_4:+32332807 | None:intergenic |
| TCTTCAAGTAATCCCTGATG+TGG | 0.613317 | 1_4:+32332738 | None:intergenic |
| TCTGAATGATAAATGCCGTA+TGG | 0.614774 | 1_4:-32332676 | Msa0160280:three_prime_UTR |
| GAACTCGGGTGAGTCGGTGG+TGG | 0.616952 | 1_4:+32339235 | None:intergenic |
| CCATATTGAAGAGAGAGGGA+GGG | 0.618013 | 1_4:+32339052 | None:intergenic |
| AAGGATGTGCACGTGAGTAA+TGG | 0.620225 | 1_4:-32333051 | Msa0160280:three_prime_UTR |
| AGTCGGTGGTGGTGACGAAG+TGG | 0.632308 | 1_4:+32339246 | None:intergenic |
| CTCGGCGTCGAGTCCGACGA+GGG | 0.632562 | 1_4:+32339181 | None:intergenic |
| AAGGATGTGCACGTGAGTAG+TGG | 0.634956 | 1_4:-32332919 | Msa0160280:three_prime_UTR |
| TTTGGAGGAGTGAGACGGTG+GGG | 0.638956 | 1_4:+32339126 | None:intergenic |
| TCGGTGGATCCATGTTGAAG+GGG | 0.645315 | 1_4:+32339288 | None:intergenic |
| TCAGGTGATACCTTCAGCAG+GGG | 0.648948 | 1_4:-32334963 | Msa0160280:CDS |
| CGCGATTTGGAGGAGTGAGA+CGG | 0.650990 | 1_4:+32339121 | None:intergenic |
| CTAACTCAAACCTCCCTCGT+CGG | 0.652710 | 1_4:-32339194 | Msa0160280:CDS |
| ACTCGGCGTCGAGTCCGACG+AGG | 0.653753 | 1_4:+32339180 | None:intergenic |
| TTGTCACCAAAAGCTAACAA+TGG | 0.658647 | 1_4:+32332606 | None:intergenic |
| AACTATTGGATCCCAAGGTG+CGG | 0.659265 | 1_4:+32334736 | None:intergenic |
| AAAAGCTAACAATGGCTGAG+TGG | 0.666874 | 1_4:+32332614 | None:intergenic |
| GGCGTCGAGTCCGACGAGGG+AGG | 0.674089 | 1_4:+32339184 | None:intergenic |
| GTGTATAAACTAATTGTACA+CGG | 0.677799 | 1_4:+32332961 | None:intergenic |
| AAGTGATGTATACCACATCA+GGG | 0.681223 | 1_4:-32332750 | Msa0160280:three_prime_UTR |
| GAAACCAGCATTTCTCGGAG+AGG | 0.684392 | 1_4:+32339026 | None:intergenic |
| TCCAAGCTTCAAGATATCTG+CGG | 0.684999 | 1_4:+32339004 | None:intergenic |
| CTTCAAAGAAGCCTGAACCA+AGG | 0.685428 | 1_4:-32334299 | Msa0160280:intron |
| CCTTGGGATCCAATAGTTGG+GGG | 0.730135 | 1_4:-32334731 | Msa0160280:CDS |
| TGCTTACCATAACATCACAG+AGG | 0.777770 | 1_4:+32334690 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAAAAACTAGTTT+TGG | - | chr1_4:32334430-32334449 | Msa0160280:intron | 10.0% |
| !!! | ATAATACTTTTCTAAATCAA+AGG | + | chr1_4:32334467-32334486 | None:intergenic | 15.0% |
| !! | ACATGAATAAAATAATTGTA+AGG | + | chr1_4:32335085-32335104 | None:intergenic | 15.0% |
| !! | AAAAAAACATAAATGTTCTT+TGG | + | chr1_4:32335329-32335348 | None:intergenic | 15.0% |
| !! | ATTCTGTAACTAATAATATT+TGG | + | chr1_4:32335597-32335616 | None:intergenic | 15.0% |
| !! | TATGTTTATTGAGTTTAAAA+AGG | - | chr1_4:32335619-32335638 | Msa0160280:intron | 15.0% |
| !! | AAAACAAAATATAGAATCAT+TGG | + | chr1_4:32338627-32338646 | None:intergenic | 15.0% |
| !! | ACTTATAAAACCAATTAGAA+CGG | - | chr1_4:32333323-32333342 | Msa0160280:intron | 20.0% |
| !! | AATATAATATATGCAAAGTC+CGG | - | chr1_4:32333384-32333403 | Msa0160280:intron | 20.0% |
| !!! | TCTAATTGGCTTTTTTTTTT+TGG | + | chr1_4:32333427-32333446 | None:intergenic | 20.0% |
| !! | AAACATACTGATAGTTATAT+TGG | + | chr1_4:32333579-32333598 | None:intergenic | 20.0% |
| !! | CTAGTTTCTATCTTAAAAAA+AGG | + | chr1_4:32334506-32334525 | None:intergenic | 20.0% |
| !! | AAGAATATTAAAGCTTTACA+TGG | + | chr1_4:32335021-32335040 | None:intergenic | 20.0% |
| !! | TTTAATATTCTTCAAAGCAT+AGG | - | chr1_4:32335029-32335048 | Msa0160280:CDS | 20.0% |
| !! | TGAGTTTAAAAAGGAATAAT+AGG | - | chr1_4:32335628-32335647 | Msa0160280:intron | 20.0% |
| !! | ATGTATATAATAGGACATAA+GGG | - | chr1_4:32335714-32335733 | Msa0160280:intron | 20.0% |
| !! | AACTGAATTATATTTGCTTT+AGG | - | chr1_4:32335832-32335851 | Msa0160280:intron | 20.0% |
| !!! | TATATGGCTTATTTTATAAC+TGG | - | chr1_4:32336237-32336256 | Msa0160280:intron | 20.0% |
| !!! | TTTTTTGTCTTTTCTTGATA+TGG | + | chr1_4:32336301-32336320 | None:intergenic | 20.0% |
| !! | TTTAAAAAATGCAAACTGAA+AGG | + | chr1_4:32336440-32336459 | None:intergenic | 20.0% |
| !!! | TCGTTTGTTAAAATAAATAG+TGG | - | chr1_4:32336463-32336482 | Msa0160280:intron | 20.0% |
| !! | ATATTTATTGAAATGCGTTA+TGG | - | chr1_4:32337442-32337461 | Msa0160280:intron | 20.0% |
| !! | TAAGTTCATTATTATTTGTG+TGG | - | chr1_4:32337686-32337705 | Msa0160280:intron | 20.0% |
| !!! | TAGAAAGATTACATATTTTG+AGG | - | chr1_4:32337910-32337929 | Msa0160280:CDS | 20.0% |
| !! | TAGTATAACATTATCTTTCA+AGG | - | chr1_4:32337977-32337996 | Msa0160280:CDS | 20.0% |
| !!! | GTATAGAATGTTAATTTTCA+TGG | - | chr1_4:32338016-32338035 | Msa0160280:intron | 20.0% |
| !!! | ATTTGACTTAAAAAATCCAT+GGG | + | chr1_4:32338087-32338106 | None:intergenic | 20.0% |
| !!! | AATTTGACTTAAAAAATCCA+TGG | + | chr1_4:32338088-32338107 | None:intergenic | 20.0% |
| !! | AGTCAAATTAATATTTAACC+TGG | - | chr1_4:32338099-32338118 | Msa0160280:intron | 20.0% |
| !!! | TACTTAGATTTCAAGTATAA+AGG | - | chr1_4:32338156-32338175 | Msa0160280:intron | 20.0% |
| !!! | ATAAGCAATTTGGTATTTTT+TGG | + | chr1_4:32338417-32338436 | None:intergenic | 20.0% |
| !! | TTCTTGTTAAATAAGCAATT+TGG | + | chr1_4:32338427-32338446 | None:intergenic | 20.0% |
| !!! | TTAACAAGAATTTAGAGTTT+TGG | - | chr1_4:32338437-32338456 | Msa0160280:intron | 20.0% |
| !! | GTTATGTAAGATAAATGATA+AGG | + | chr1_4:32338542-32338561 | None:intergenic | 20.0% |
| !! | AAATAACTTCAAAACATATG+AGG | + | chr1_4:32338664-32338683 | None:intergenic | 20.0% |
| !!! | ACCTAACTATTTAATTTCAA+CGG | - | chr1_4:32339139-32339158 | Msa0160280:CDS | 20.0% |
| ! | GTTGTAATAATTAGTTACAC+CGG | - | chr1_4:32333168-32333187 | Msa0160280:intron | 25.0% |
| ! | ATTCTAACTTCTTAACTAAC+CGG | + | chr1_4:32333190-32333209 | None:intergenic | 25.0% |
| ! | ATATAATATATGCAAAGTCC+GGG | - | chr1_4:32333385-32333404 | Msa0160280:intron | 25.0% |
| !!! | AATTGGCTTTTTTTTTTTGG+TGG | + | chr1_4:32333424-32333443 | None:intergenic | 25.0% |
| !! | TAAGTACTCATTTAGAATCA+CGG | - | chr1_4:32333452-32333471 | Msa0160280:CDS | 25.0% |
| ! | CAGGAATTTAATATATGTGA+TGG | - | chr1_4:32333603-32333622 | Msa0160280:CDS | 25.0% |
| ! | CATCTTCAGTTTAAGAAAAA+TGG | - | chr1_4:32333952-32333971 | Msa0160280:intron | 25.0% |
| ! | TTCAGTTTAAGAAAAATGGA+AGG | - | chr1_4:32333956-32333975 | Msa0160280:intron | 25.0% |
| !!! | AGCCATTCAATTCAATTTTT+TGG | - | chr1_4:32334068-32334087 | Msa0160280:CDS | 25.0% |
| !!! | GCCATTCAATTCAATTTTTT+GGG | - | chr1_4:32334069-32334088 | Msa0160280:CDS | 25.0% |
| ! | ACCCAAAAAATTGAATTGAA+TGG | + | chr1_4:32334073-32334092 | None:intergenic | 25.0% |
| !!! | CACAATTAGAAGTTAGTTTT+CGG | - | chr1_4:32334209-32334228 | Msa0160280:intron | 25.0% |
| ! | AGGAACACTAGAAAATATAT+CGG | + | chr1_4:32334380-32334399 | None:intergenic | 25.0% |
| ! | AATAATACTGTAGGATACAA+AGG | + | chr1_4:32334400-32334419 | None:intergenic | 25.0% |
| ! | TTTGTCGAAAATAATACTGT+AGG | + | chr1_4:32334409-32334428 | None:intergenic | 25.0% |
| ! | CTATCTTAAAAAAAGGAGTT+CGG | + | chr1_4:32334499-32334518 | None:intergenic | 25.0% |
| ! | AAATTTCATTCCTAAGTAGA+TGG | - | chr1_4:32335253-32335272 | Msa0160280:intron | 25.0% |
| ! | AAGACAACTTACAAAAGATT+AGG | + | chr1_4:32335417-32335436 | None:intergenic | 25.0% |
| ! | CAGTTTATGTTAATAGAAAC+AGG | - | chr1_4:32335691-32335710 | Msa0160280:intron | 25.0% |
| ! | AGAAACAGGATGTATATAAT+AGG | - | chr1_4:32335705-32335724 | Msa0160280:intron | 25.0% |
| ! | GATGTATATAATAGGACATA+AGG | - | chr1_4:32335713-32335732 | Msa0160280:intron | 25.0% |
| ! | TGTATATAATAGGACATAAG+GGG | - | chr1_4:32335715-32335734 | Msa0160280:intron | 25.0% |
| !! | TAGCATTTTCAGTTACTATA+AGG | - | chr1_4:32335805-32335824 | Msa0160280:intron | 25.0% |
| ! | GCGAATTAATTTAAACTAGA+GGG | + | chr1_4:32336097-32336116 | None:intergenic | 25.0% |
| !!! | CAGCATTCTATTTTTCAAAT+TGG | - | chr1_4:32336147-32336166 | Msa0160280:intron | 25.0% |
| !! | AATTTCTTCTGAAGAGTTTA+TGG | + | chr1_4:32336199-32336218 | None:intergenic | 25.0% |
| ! | TATTCTATATCCATTCACTA+AGG | - | chr1_4:32336717-32336736 | Msa0160280:intron | 25.0% |
| ! | TACACAGAATTTCTTGTAAT+TGG | - | chr1_4:32336745-32336764 | Msa0160280:intron | 25.0% |
| ! | TTCAACAAAAATTCATCCAT+TGG | + | chr1_4:32337010-32337029 | None:intergenic | 25.0% |
| ! | TTGAAAATTGTCAGAAAACA+TGG | - | chr1_4:32337025-32337044 | Msa0160280:intron | 25.0% |
| !! | TTCTCTAAATGTTTTTCTCT+GGG | + | chr1_4:32337136-32337155 | None:intergenic | 25.0% |
| ! | GTTCATAAAAATTGAAGAGA+GGG | + | chr1_4:32337275-32337294 | None:intergenic | 25.0% |
| ! | TGGAGCATATAATATATGAT+CGG | - | chr1_4:32337372-32337391 | Msa0160280:intron | 25.0% |
| ! | ATAAAATGTGAGTATGAATC+TGG | - | chr1_4:32337519-32337538 | Msa0160280:intron | 25.0% |
| ! | TCAATTTCTCAAGCAATATA+TGG | + | chr1_4:32338233-32338252 | None:intergenic | 25.0% |
| ! | GATCTTCGTTAATATTTAGT+TGG | + | chr1_4:32338306-32338325 | None:intergenic | 25.0% |
| ! | TAAGATAAATGATAAGGCAA+TGG | + | chr1_4:32338536-32338555 | None:intergenic | 25.0% |
| ! | AAAACATATGAGGTGAAAAA+GGG | + | chr1_4:32338654-32338673 | None:intergenic | 25.0% |
| !!! | ATTTATTTTGACTACGAAAG+AGG | - | chr1_4:32338680-32338699 | Msa0160280:intron | 25.0% |
| !!! | TTTATTTTGACTACGAAAGA+GGG | - | chr1_4:32338681-32338700 | Msa0160280:intron | 25.0% |
| ! | CCTACTCTGATTTATTATTA+CGG | - | chr1_4:32338716-32338735 | Msa0160280:intron | 25.0% |
| ! | GATTAATTTAAACTTCGTCA+AGG | - | chr1_4:32338842-32338861 | Msa0160280:intron | 25.0% |
| ! | GTGTATAAACTAATTGTACA+CGG | + | chr1_4:32338954-32338973 | None:intergenic | 25.0% |
| ! | GATTAATTTAAACTTCGTCA+AGG | - | chr1_4:32338842-32338861 | Msa0160280:intron | 25.0% |
| ! | TTTAAAGGAATTGTATTCAG+TGG | + | chr1_4:32339021-32339040 | None:intergenic | 25.0% |
| !! | CAGACGATATTTTTCTTTAA+AGG | + | chr1_4:32339036-32339055 | None:intergenic | 25.0% |
| ! | TTAAAGAAAAATATCGTCTG+CGG | - | chr1_4:32339036-32339055 | Msa0160280:CDS | 25.0% |
| ! | TCCGTTGAAATTAAATAGTT+AGG | + | chr1_4:32339143-32339162 | None:intergenic | 25.0% |
| ! | TTAAACAAATTGCATCCATA+CGG | + | chr1_4:32339254-32339273 | None:intergenic | 25.0% |
| GTTAACTATAGGAGAAGAAA+TGG | + | chr1_4:32332580-32332599 | None:intergenic | 30.0% | |
| AATTCAAACCTTATCGAAAC+CGG | + | chr1_4:32332995-32333014 | None:intergenic | 30.0% | |
| ACTCATCGAGAATTGTAATA+TGG | + | chr1_4:32333097-32333116 | None:intergenic | 30.0% | |
| TACCATACTACAATTCTTGA+TGG | - | chr1_4:32333220-32333239 | Msa0160280:intron | 30.0% | |
| TTCCATCAAGAATTGTAGTA+TGG | + | chr1_4:32333225-32333244 | None:intergenic | 30.0% | |
| TATAATATATGCAAAGTCCG+GGG | - | chr1_4:32333386-32333405 | Msa0160280:intron | 30.0% | |
| GAGTACTTAGTTGTTCTAAT+TGG | + | chr1_4:32333441-32333460 | None:intergenic | 30.0% | |
| AAAATGTAGAAGCTCCAATT+TGG | + | chr1_4:32333513-32333532 | None:intergenic | 30.0% | |
| ACTGATAGTTATATTGGCAA+TGG | + | chr1_4:32333573-32333592 | None:intergenic | 30.0% | |
| ACTATCAGTATGTTTAATGC+AGG | - | chr1_4:32333584-32333603 | Msa0160280:CDS | 30.0% | |
| TGTAATATGATATCAGAGTC+AGG | + | chr1_4:32333650-32333669 | None:intergenic | 30.0% | |
| ACACTCGTAATATCCAAATA+CGG | + | chr1_4:32333925-32333944 | None:intergenic | 30.0% | |
| AAGAGTTTGTCAACTATTTG+TGG | - | chr1_4:32333997-32334016 | Msa0160280:intron | 30.0% | |
| AACTATTTGTGGAGAATTGT+TGG | - | chr1_4:32334008-32334027 | Msa0160280:intron | 30.0% | |
| ACTATTTGTGGAGAATTGTT+GGG | - | chr1_4:32334009-32334028 | Msa0160280:intron | 30.0% | |
| TTGCTGTATTAAATGTAGTC+AGG | - | chr1_4:32334337-32334356 | Msa0160280:CDS | 30.0% | |
| !!! | AAAACTAGTTTTGGAAGCTA+AGG | - | chr1_4:32334439-32334458 | Msa0160280:intron | 30.0% |
| !!! | AAACTAGTTTTGGAAGCTAA+GGG | - | chr1_4:32334440-32334459 | Msa0160280:intron | 30.0% |
| GTCATAAACGTAGATATGTT+TGG | - | chr1_4:32334527-32334546 | Msa0160280:intron | 30.0% | |
| !!! | GAAAACAAGATGTTAGCTTT+TGG | + | chr1_4:32334586-32334605 | None:intergenic | 30.0% |
| ! | ATTTGTTAGCTTAAACTTCC+AGG | + | chr1_4:32334689-32334708 | None:intergenic | 30.0% |
| CCTATATAATAGAGTCTATG+TGG | + | chr1_4:32334870-32334889 | None:intergenic | 30.0% | |
| CCACATAGACTCTATTATAT+AGG | - | chr1_4:32334867-32334886 | Msa0160280:CDS | 30.0% | |
| ! | CTGGCGATATTTATGTATTT+TGG | + | chr1_4:32334955-32334974 | None:intergenic | 30.0% |
| CAAAATACATAAATATCGCC+AGG | - | chr1_4:32334953-32334972 | Msa0160280:CDS | 30.0% | |
| ATGTCAGACATCAATATACA+CGG | - | chr1_4:32335101-32335120 | Msa0160280:CDS | 30.0% | |
| ! | ATATACACGGTGTCAAAATT+AGG | - | chr1_4:32335114-32335133 | Msa0160280:CDS | 30.0% |
| !! | ATTAGGTGCTTTATTTCTGT+AGG | - | chr1_4:32335131-32335150 | Msa0160280:intron | 30.0% |
| TTAGGAATGAAATTTGCACA+AGG | + | chr1_4:32335248-32335267 | None:intergenic | 30.0% | |
| TTTGTTGAATCCATCTACTT+AGG | + | chr1_4:32335266-32335285 | None:intergenic | 30.0% | |
| ACATGCTTTCTCAAATTTGT+TGG | - | chr1_4:32335509-32335528 | Msa0160280:intron | 30.0% | |
| CTTTCAGTAAAAACCTTCTT+CGG | + | chr1_4:32335972-32335991 | None:intergenic | 30.0% | |
| AAAGTTTCATACCAATCTCT+GGG | - | chr1_4:32335988-32336007 | Msa0160280:CDS | 30.0% | |
| CGCGAATTAATTTAAACTAG+AGG | + | chr1_4:32336098-32336117 | None:intergenic | 30.0% | |
| ! | CAGAAGAAATTATGATGATG+CGG | - | chr1_4:32336208-32336227 | Msa0160280:intron | 30.0% |
| AAAATTATTTGTGCCATCCT+TGG | - | chr1_4:32336319-32336338 | Msa0160280:intron | 30.0% | |
| GCAAAGTGAAACTATTAATC+AGG | + | chr1_4:32336365-32336384 | None:intergenic | 30.0% | |
| GATGTGAAAGTAAGATCATA+TGG | + | chr1_4:32336686-32336705 | None:intergenic | 30.0% | |
| TTTATTAAATTCTACGCTGC+AGG | - | chr1_4:32336770-32336789 | Msa0160280:intron | 30.0% | |
| ACTTCGAATGGATAATCTAT+TGG | + | chr1_4:32336813-32336832 | None:intergenic | 30.0% | |
| TGATTCAAAAGTCATCATGT+AGG | - | chr1_4:32336975-32336994 | Msa0160280:intron | 30.0% | |
| GATTCAAAAGTCATCATGTA+GGG | - | chr1_4:32336976-32336995 | Msa0160280:intron | 30.0% | |
| ! | GTTCTCTAAATGTTTTTCTC+TGG | + | chr1_4:32337137-32337156 | None:intergenic | 30.0% |
| ATTTAGAGAACTTTGATGAG+TGG | - | chr1_4:32337146-32337165 | Msa0160280:intron | 30.0% | |
| CGTTCATAAAAATTGAAGAG+AGG | + | chr1_4:32337276-32337295 | None:intergenic | 30.0% | |
| TATACCCTTTCGTTAATCTT+TGG | - | chr1_4:32337301-32337320 | Msa0160280:intron | 30.0% | |
| TAGTTAAATTCCAATCACTC+TGG | - | chr1_4:32337352-32337371 | Msa0160280:intron | 30.0% | |
| ATTGAAATGCGTTATGGAAA+AGG | - | chr1_4:32337448-32337467 | Msa0160280:intron | 30.0% | |
| CAAAACATTTACGTTGTGTT+GGG | - | chr1_4:32337571-32337590 | Msa0160280:intron | 30.0% | |
| AAAAAATGAACAGCTACTTG+AGG | - | chr1_4:32337864-32337883 | Msa0160280:intron | 30.0% | |
| !!! | ACTTGAGGTATTGTTGTTTT+AGG | - | chr1_4:32337879-32337898 | Msa0160280:intron | 30.0% |
| TATCTTTCAAGGAACTCTTA+TGG | - | chr1_4:32337988-32338007 | Msa0160280:CDS | 30.0% | |
| !!! | CAATTTTAGCTGTGTCATTA+TGG | + | chr1_4:32338258-32338277 | None:intergenic | 30.0% |
| GTTGGAAAGTTTCAATAATC+TGG | + | chr1_4:32338288-32338307 | None:intergenic | 30.0% | |
| !! | TTTAGAGTTTTGGCAATGTA+TGG | - | chr1_4:32338447-32338466 | Msa0160280:intron | 30.0% |
| !! | ATAGAATCATTGGTTTCAGT+TGG | + | chr1_4:32338617-32338636 | None:intergenic | 30.0% |
| AAACATATGAGGTGAAAAAG+GGG | + | chr1_4:32338653-32338672 | None:intergenic | 30.0% | |
| CAAAACATATGAGGTGAAAA+AGG | + | chr1_4:32338655-32338674 | None:intergenic | 30.0% | |
| !!! | TTATTTTGACTACGAAAGAG+GGG | - | chr1_4:32338682-32338701 | Msa0160280:intron | 30.0% |
| CCGTAATAATAAATCAGAGT+AGG | + | chr1_4:32338719-32338738 | None:intergenic | 30.0% | |
| TTCAATGGAAATGTATTCAG+TGG | + | chr1_4:32338889-32338908 | None:intergenic | 30.0% | |
| ! | AGACTGACATTTTTCTTCAA+TGG | + | chr1_4:32338904-32338923 | None:intergenic | 30.0% |
| TTCAAAGACAACGTATTTAG+TGG | + | chr1_4:32339077-32339096 | None:intergenic | 30.0% | |
| !!! | GGGTTTTGGTTGTTAACTAT+AGG | + | chr1_4:32332591-32332610 | None:intergenic | 35.0% |
| ! | TCTTCTACCTTTTGTGAACA+AGG | - | chr1_4:32332961-32332980 | Msa0160280:three_prime_UTR | 35.0% |
| ATTGCATCCTTGTTCACAAA+AGG | + | chr1_4:32332971-32332990 | None:intergenic | 35.0% | |
| ATTCAAACCTTATCGAAACC+GGG | + | chr1_4:32332994-32333013 | None:intergenic | 35.0% | |
| TGTTCTATTGTCGTATCTCT+TGG | + | chr1_4:32333301-32333320 | None:intergenic | 35.0% | |
| ATTTGGCTAATGCTCCAAAT+TGG | - | chr1_4:32333496-32333515 | Msa0160280:CDS | 35.0% | |
| !!! | TTTTCACGTTTTTCAAGCCT+TGG | - | chr1_4:32333529-32333548 | Msa0160280:CDS | 35.0% |
| !!! | TTTCACGTTTTTCAAGCCTT+GGG | - | chr1_4:32333530-32333549 | Msa0160280:CDS | 35.0% |
| ! | GACTGGTTAGTTGTTCTAAT+TGG | + | chr1_4:32333779-32333798 | None:intergenic | 35.0% |
| ACTAGTCAGTTCATTTAGAC+TGG | + | chr1_4:32333796-32333815 | None:intergenic | 35.0% | |
| CTATTTGTGGAGAATTGTTG+GGG | - | chr1_4:32334010-32334029 | Msa0160280:intron | 35.0% | |
| TGTGTTCAGAAAACAAGTAG+TGG | - | chr1_4:32334100-32334119 | Msa0160280:CDS | 35.0% | |
| ! | CAAATATCACAGCATTGAGT+AGG | - | chr1_4:32334148-32334167 | Msa0160280:CDS | 35.0% |
| !!! | AAGTTAGTTTTCGGTGTTTG+TGG | - | chr1_4:32334218-32334237 | Msa0160280:intron | 35.0% |
| ! | GAGTTTTCACTTAGCATATG+AGG | - | chr1_4:32334289-32334308 | Msa0160280:intron | 35.0% |
| TTGTATAAAACACATCGTCC+TGG | - | chr1_4:32334668-32334687 | Msa0160280:intron | 35.0% | |
| ! | ATGGCCTTAAACTTGTATCA+TGG | - | chr1_4:32334728-32334747 | Msa0160280:CDS | 35.0% |
| GAAGCCATGATACAAGTTTA+AGG | + | chr1_4:32334735-32334754 | None:intergenic | 35.0% | |
| CTTAATACATGAACAGTGAG+CGG | - | chr1_4:32334775-32334794 | Msa0160280:CDS | 35.0% | |
| TTAATACATGAACAGTGAGC+GGG | - | chr1_4:32334776-32334795 | Msa0160280:CDS | 35.0% | |
| TCTCTAGTTATCTCTCATTC+AGG | + | chr1_4:32334807-32334826 | None:intergenic | 35.0% | |
| AGATAACTAGAGACATGTGA+TGG | - | chr1_4:32334814-32334833 | Msa0160280:CDS | 35.0% | |
| GTGTAGTTCAAAGTTCAAAC+CGG | + | chr1_4:32334848-32334867 | None:intergenic | 35.0% | |
| TTGGCAGCATTAATGTTCTT+TGG | + | chr1_4:32335365-32335384 | None:intergenic | 35.0% | |
| ACATTAATGCTGCCAACATA+AGG | - | chr1_4:32335369-32335388 | Msa0160280:intron | 35.0% | |
| GTTTAAACCAGTCCTTATGT+TGG | + | chr1_4:32335384-32335403 | None:intergenic | 35.0% | |
| ! | TTTTGCTCCATTGGAATTTC+AGG | - | chr1_4:32335763-32335782 | Msa0160280:intron | 35.0% |
| ! | TTTGGAACCTGAAATTCCAA+TGG | + | chr1_4:32335773-32335792 | None:intergenic | 35.0% |
| !! | ATTTCAGGTTCCAAAGACTT+TGG | - | chr1_4:32335778-32335797 | Msa0160280:intron | 35.0% |
| TTGCTTGCTCGGAATATTTA+AGG | - | chr1_4:32335928-32335947 | Msa0160280:intron | 35.0% | |
| ! | CGGAATATTTAAGGTCTTTC+AGG | - | chr1_4:32335937-32335956 | Msa0160280:intron | 35.0% |
| ! | ATTTAAGGTCTTTCAGGCAA+CGG | - | chr1_4:32335943-32335962 | Msa0160280:intron | 35.0% |
| GAAAGTTTCATACCAATCTC+TGG | - | chr1_4:32335987-32336006 | Msa0160280:CDS | 35.0% | |
| TTGGATCGATTAAGTTTGAC+TGG | - | chr1_4:32336166-32336185 | Msa0160280:intron | 35.0% | |
| GATGATGCGGAAAAGATATA+TGG | - | chr1_4:32336221-32336240 | Msa0160280:intron | 35.0% | |
| TTCTTGATATGGAACTCAAG+TGG | + | chr1_4:32336290-32336309 | None:intergenic | 35.0% | |
| CAAATGGAAAATTCCAAGGA+TGG | + | chr1_4:32336335-32336354 | None:intergenic | 35.0% | |
| GACACAAATGGAAAATTCCA+AGG | + | chr1_4:32336339-32336358 | None:intergenic | 35.0% | |
| TTAATCAGGCAAGACACAAA+TGG | + | chr1_4:32336351-32336370 | None:intergenic | 35.0% | |
| TTGACCAAGTAGCAGATTAT+TGG | - | chr1_4:32336393-32336412 | Msa0160280:intron | 35.0% | |
| TGACCAAGTAGCAGATTATT+GGG | - | chr1_4:32336394-32336413 | Msa0160280:intron | 35.0% | |
| TGCATCACTTGTAAAGACAA+TGG | - | chr1_4:32336557-32336576 | Msa0160280:intron | 35.0% | |
| GTGTATACATCCTTAGTGAA+TGG | + | chr1_4:32336730-32336749 | None:intergenic | 35.0% | |
| ! | CACACAATTTTGTGAAGCTT+TGG | - | chr1_4:32336892-32336911 | Msa0160280:intron | 35.0% |
| TTCTTGTTCTGATGTTGTTC+AGG | - | chr1_4:32336931-32336950 | Msa0160280:intron | 35.0% | |
| TTGTCAGAAAACATGGTGAT+AGG | - | chr1_4:32337032-32337051 | Msa0160280:intron | 35.0% | |
| ! | TGGTGATAGGATTTTGCTAA+AGG | - | chr1_4:32337045-32337064 | Msa0160280:intron | 35.0% |
| !!! | CGTTTCTTTTTTGAGGTCTT+GGG | + | chr1_4:32337085-32337104 | None:intergenic | 35.0% |
| CCAAGACCTCAAAAAAGAAA+CGG | - | chr1_4:32337083-32337102 | Msa0160280:intron | 35.0% | |
| !!! | CTTCTTCCGTTTCTTTTTTG+AGG | + | chr1_4:32337092-32337111 | None:intergenic | 35.0% |
| AAGAAGCAGTTGCCAATTAA+TGG | - | chr1_4:32337106-32337125 | Msa0160280:intron | 35.0% | |
| AGAAGCAGTTGCCAATTAAT+GGG | - | chr1_4:32337107-32337126 | Msa0160280:intron | 35.0% | |
| ATAACATCACAGAGGAACTT+TGG | + | chr1_4:32337217-32337236 | None:intergenic | 35.0% | |
| AAAGTTCCTCTGTGATGTTA+TGG | - | chr1_4:32337216-32337235 | Msa0160280:intron | 35.0% | |
| ACCTCCAAAGATTAACGAAA+GGG | + | chr1_4:32337308-32337327 | None:intergenic | 35.0% | |
| AACCTCCAAAGATTAACGAA+AGG | + | chr1_4:32337309-32337328 | None:intergenic | 35.0% | |
| ! | ATCTTTGGAGGTTAAGCAAT+AGG | - | chr1_4:32337316-32337335 | Msa0160280:intron | 35.0% |
| ATTATATGCTCCAGAGTGAT+TGG | + | chr1_4:32337365-32337384 | None:intergenic | 35.0% | |
| AATGCGTTATGGAAAAGGAA+AGG | - | chr1_4:32337453-32337472 | Msa0160280:intron | 35.0% | |
| ATGTGAGTATGAATCTGGTA+AGG | - | chr1_4:32337524-32337543 | Msa0160280:intron | 35.0% | |
| ATCTGGTAAGGAATATACTC+AGG | - | chr1_4:32337536-32337555 | Msa0160280:intron | 35.0% | |
| !! | AAGGAATATACTCAGGTTGA+AGG | - | chr1_4:32337543-32337562 | Msa0160280:intron | 35.0% |
| GCAAAACATTTACGTTGTGT+TGG | - | chr1_4:32337570-32337589 | Msa0160280:intron | 35.0% | |
| ATACTCTATTACCTTGGTTC+AGG | + | chr1_4:32337627-32337646 | None:intergenic | 35.0% | |
| ! | AGAAGCATACTCTATTACCT+TGG | + | chr1_4:32337633-32337652 | None:intergenic | 35.0% |
| CATTATTATTTGTGTGGCAG+CGG | - | chr1_4:32337692-32337711 | Msa0160280:intron | 35.0% | |
| ! | TTCTATTTTCCTCTTCCTGT+CGG | - | chr1_4:32337721-32337740 | Msa0160280:intron | 35.0% |
| ACAATGATAATTCATCCGAC+AGG | + | chr1_4:32337739-32337758 | None:intergenic | 35.0% | |
| !!! | AGAAAAGAGTGCTTTTGACA+CGG | - | chr1_4:32337788-32337807 | Msa0160280:intron | 35.0% |
| ACCATGCAAAAAATGAGCTA+GGG | + | chr1_4:32338192-32338211 | None:intergenic | 35.0% | |
| TCAAGATGCACAAAATGCAA+TGG | - | chr1_4:32338334-32338353 | Msa0160280:intron | 35.0% | |
| ACAATACCTCCCAATAAAGT+TGG | + | chr1_4:32338480-32338499 | None:intergenic | 35.0% | |
| AGTTGGATTAAGTAAGCGTT+TGG | + | chr1_4:32338600-32338619 | None:intergenic | 35.0% | |
| AACATATGAGGTGAAAAAGG+GGG | + | chr1_4:32338652-32338671 | None:intergenic | 35.0% | |
| TATTGTGCCTGTCATATTCA+GGG | - | chr1_4:32338764-32338783 | Msa0160280:intron | 35.0% | |
| TGAAGAAAAATGTCAGTCTG+TGG | - | chr1_4:32338905-32338924 | Msa0160280:intron | 35.0% | |
| AAGTGATGTATACCACATCA+GGG | - | chr1_4:32339162-32339181 | Msa0160280:CDS | 35.0% | |
| TCTGAATGATAAATGCCGTA+TGG | - | chr1_4:32339236-32339255 | Msa0160280:CDS | 35.0% | |
| TTGTCACCAAAAGCTAACAA+TGG | + | chr1_4:32339309-32339328 | None:intergenic | 35.0% | |
| ! | GAAGAGATGAATGAGGGTTT+TGG | + | chr1_4:32332605-32332624 | None:intergenic | 40.0% |
| !! | ATTTCGAGAGGTTTCTGGTT+CGG | + | chr1_4:32332646-32332665 | None:intergenic | 40.0% |
| ! | TTTGAGTTAGGGAACGAGTT+AGG | + | chr1_4:32332708-32332727 | None:intergenic | 40.0% |
| !! | GGAATGAGTTTTGGTGAGTT+CGG | + | chr1_4:32332768-32332787 | None:intergenic | 40.0% |
| GTTCCCATATTGAAGAGAGA+GGG | + | chr1_4:32332867-32332886 | None:intergenic | 40.0% | |
| TCCAAGCTTCAAGATATCTG+CGG | + | chr1_4:32332911-32332930 | None:intergenic | 40.0% | |
| !!! | CTTTTTTTTTTTGGTGGCCG+GGG | + | chr1_4:32333418-32333437 | None:intergenic | 40.0% |
| !!! | GCTTTTTTTTTTTGGTGGCC+GGG | + | chr1_4:32333419-32333438 | None:intergenic | 40.0% |
| !!! | GGCTTTTTTTTTTTGGTGGC+CGG | + | chr1_4:32333420-32333439 | None:intergenic | 40.0% |
| ! | GTACTCATTTAGAATCACGG+TGG | - | chr1_4:32333455-32333474 | Msa0160280:CDS | 40.0% |
| TAGCCAAATGCACAATAGGT+GGG | + | chr1_4:32333485-32333504 | None:intergenic | 40.0% | |
| TTAGCCAAATGCACAATAGG+TGG | + | chr1_4:32333486-32333505 | None:intergenic | 40.0% | |
| GCATTAGCCAAATGCACAAT+AGG | + | chr1_4:32333489-32333508 | None:intergenic | 40.0% | |
| GTTGTGATGATTCGTGTTTG+TGG | - | chr1_4:32333879-32333898 | Msa0160280:intron | 40.0% | |
| TTCGTGTTTGTGGTGAATTG+TGG | - | chr1_4:32333889-32333908 | Msa0160280:intron | 40.0% | |
| GTTGGGGATTTCACTATCTA+AGG | - | chr1_4:32334026-32334045 | Msa0160280:intron | 40.0% | |
| AGAGAATGAGTGCACATGAA+TGG | - | chr1_4:32334709-32334728 | Msa0160280:CDS | 40.0% | |
| TTCTCTCACAAGAGTCAGTT+AGG | - | chr1_4:32334752-32334771 | Msa0160280:CDS | 40.0% | |
| TCAAAGCATAGGTTGCAAGT+TGG | - | chr1_4:32335040-32335059 | Msa0160280:CDS | 40.0% | |
| GAATGTGTTCTGCATCAAGA+AGG | - | chr1_4:32335172-32335191 | Msa0160280:intron | 40.0% | |
| ! | AAGCATGTGTTTTGCTCCAT+TGG | - | chr1_4:32335754-32335773 | Msa0160280:intron | 40.0% |
| ATGCTAGTTGCCAAAGTCTT+TGG | + | chr1_4:32335791-32335810 | None:intergenic | 40.0% | |
| GTTGTGACCAATCACTACAT+TGG | + | chr1_4:32335862-32335881 | None:intergenic | 40.0% | |
| ! | TCTATAGTTTGCCCAGAGAT+TGG | + | chr1_4:32336002-32336021 | None:intergenic | 40.0% |
| ACGAAATACAACACAACCAG+AGG | + | chr1_4:32336025-32336044 | None:intergenic | 40.0% | |
| ! | TGAGACTTTGCTGCATTGAT+TGG | - | chr1_4:32336058-32336077 | Msa0160280:CDS | 40.0% |
| CTTCCCAATAATCTGCTACT+TGG | + | chr1_4:32336400-32336419 | None:intergenic | 40.0% | |
| TCCATTCGAAGTGCAAATCT+TGG | - | chr1_4:32336821-32336840 | Msa0160280:intron | 40.0% | |
| CCATTCGAAGTGCAAATCTT+GGG | - | chr1_4:32336822-32336841 | Msa0160280:intron | 40.0% | |
| !! | TTGGGTTGAAAGAGCTATTC+AGG | - | chr1_4:32336840-32336859 | Msa0160280:intron | 40.0% |
| ATGTAGGGATACTAAGCCAA+TGG | - | chr1_4:32336991-32337010 | Msa0160280:intron | 40.0% | |
| !!! | CCGTTTCTTTTTTGAGGTCT+TGG | + | chr1_4:32337086-32337105 | None:intergenic | 40.0% |
| TGCTTACCATAACATCACAG+AGG | + | chr1_4:32337225-32337244 | None:intergenic | 40.0% | |
| ACCCTTTCGTTAATCTTTGG+AGG | - | chr1_4:32337304-32337323 | Msa0160280:intron | 40.0% | |
| !! | ATATACTCAGGTTGAAGGCT+TGG | - | chr1_4:32337548-32337567 | Msa0160280:intron | 40.0% |
| ATAATTCATCCGACAGGAAG+AGG | + | chr1_4:32337733-32337752 | None:intergenic | 40.0% | |
| !!! | GAAAAGAGTGCTTTTGACAC+GGG | - | chr1_4:32337789-32337808 | Msa0160280:intron | 40.0% |
| TCAAGGAACTCTTATGGAGT+AGG | - | chr1_4:32337994-32338013 | Msa0160280:CDS | 40.0% | |
| ACAGCAAAGACAAACTTTCC+AGG | + | chr1_4:32338120-32338139 | None:intergenic | 40.0% | |
| ATGCAAAAAATGAGCTAGGG+AGG | + | chr1_4:32338189-32338208 | None:intergenic | 40.0% | |
| !!! | TCCCTAGCTCATTTTTTGCA+TGG | - | chr1_4:32338188-32338207 | Msa0160280:intron | 40.0% |
| CACCATGCAAAAAATGAGCT+AGG | + | chr1_4:32338193-32338212 | None:intergenic | 40.0% | |
| !!! | CTAGCTCATTTTTTGCATGG+TGG | - | chr1_4:32338191-32338210 | Msa0160280:intron | 40.0% |
| GATGCACAAAATGCAATGGA+AGG | - | chr1_4:32338338-32338357 | Msa0160280:intron | 40.0% | |
| ATAGCCTCTTCAGTTGAAAG+TGG | + | chr1_4:32338376-32338395 | None:intergenic | 40.0% | |
| TGGACTGTCACCAACTTTAT+TGG | - | chr1_4:32338467-32338486 | Msa0160280:intron | 40.0% | |
| GGACTGTCACCAACTTTATT+GGG | - | chr1_4:32338468-32338487 | Msa0160280:intron | 40.0% | |
| ACATATGAGGTGAAAAAGGG+GGG | + | chr1_4:32338651-32338670 | None:intergenic | 40.0% | |
| GTATTGTGCCTGTCATATTC+AGG | - | chr1_4:32338763-32338782 | Msa0160280:intron | 40.0% | |
| CTGTACTGCATTATGGTACT+GGG | + | chr1_4:32338792-32338811 | None:intergenic | 40.0% | |
| TCTGTACTGCATTATGGTAC+TGG | + | chr1_4:32338793-32338812 | None:intergenic | 40.0% | |
| CGAACTTCTGTACTGCATTA+TGG | + | chr1_4:32338799-32338818 | None:intergenic | 40.0% | |
| TCGTCTGCGGTTTAATGTAA+TGG | - | chr1_4:32339049-32339068 | Msa0160280:CDS | 40.0% | |
| GAAGTGATGTATACCACATC+AGG | - | chr1_4:32339161-32339180 | Msa0160280:CDS | 40.0% | |
| TCTTCAAGTAATCCCTGATG+TGG | + | chr1_4:32339177-32339196 | None:intergenic | 40.0% | |
| AAAAGCTAACAATGGCTGAG+TGG | + | chr1_4:32339301-32339320 | None:intergenic | 40.0% | |
| !!! | ACTCAGCCATTGTTAGCTTT+TGG | - | chr1_4:32339300-32339319 | Msa0160280:exon | 40.0% |
| GAAGGGGAAGAGATGAATGA+GGG | + | chr1_4:32332611-32332630 | None:intergenic | 45.0% | |
| TGAAGGGGAAGAGATGAATG+AGG | + | chr1_4:32332612-32332631 | None:intergenic | 45.0% | |
| TCATCTCTTCCCCTTCAACA+TGG | - | chr1_4:32332615-32332634 | Msa0160280:three_prime_UTR | 45.0% | |
| TTCGGTGGATCCATGTTGAA+GGG | + | chr1_4:32332628-32332647 | None:intergenic | 45.0% | |
| ! | AGTGGATTTCGAGAGGTTTC+TGG | + | chr1_4:32332651-32332670 | None:intergenic | 45.0% |
| ACGAGTTAGGTGAGTGAACT+CGG | + | chr1_4:32332695-32332714 | None:intergenic | 45.0% | |
| !! | TGAGTTTTGGTGAGTTCGGA+CGG | + | chr1_4:32332764-32332783 | None:intergenic | 45.0% |
| CCATATTGAAGAGAGAGGGA+GGG | + | chr1_4:32332863-32332882 | None:intergenic | 45.0% | |
| CCTCCCTCTCTCTTCAATAT+GGG | - | chr1_4:32332861-32332880 | Msa0160280:three_prime_UTR | 45.0% | |
| GGTTCCCATATTGAAGAGAG+AGG | + | chr1_4:32332868-32332887 | None:intergenic | 45.0% | |
| TCCGCAGATATCTTGAAGCT+TGG | - | chr1_4:32332907-32332926 | Msa0160280:three_prime_UTR | 45.0% | |
| TGTGAACAAGGATGCAATCC+CGG | - | chr1_4:32332973-32332992 | Msa0160280:three_prime_UTR | 45.0% | |
| ATGCAATCCCGGTTTCGATA+AGG | - | chr1_4:32332984-32333003 | Msa0160280:three_prime_UTR | 45.0% | |
| CTCATGAGGACCGTTCTAAT+TGG | + | chr1_4:32333336-32333355 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr1_4:32333352-32333371 | Msa0160280:intron | 45.0% |
| TACCCCACCTATTGTGCATT+TGG | - | chr1_4:32333479-32333498 | Msa0160280:CDS | 45.0% | |
| AGCCAAATGCACAATAGGTG+GGG | + | chr1_4:32333484-32333503 | None:intergenic | 45.0% | |
| CTCAACTATGAGTTCGATCG+AGG | + | chr1_4:32333675-32333694 | None:intergenic | 45.0% | |
| GTTTGTGGTGAATTGTGGAC+AGG | - | chr1_4:32333894-32333913 | Msa0160280:intron | 45.0% | |
| ! | TGGACAGGTTGAACCGTATT+TGG | - | chr1_4:32333909-32333928 | Msa0160280:intron | 45.0% |
| ! | ACATGTGATGGTGAAACTGC+CGG | - | chr1_4:32334826-32334845 | Msa0160280:CDS | 45.0% |
| AGTCAGTCACTATTCAGACC+TGG | + | chr1_4:32334974-32334993 | None:intergenic | 45.0% | |
| CTGAATAGTGACTGACTGCA+AGG | - | chr1_4:32334977-32334996 | Msa0160280:CDS | 45.0% | |
| AATGCTGCCAACATAAGGAC+TGG | - | chr1_4:32335374-32335393 | Msa0160280:intron | 45.0% | |
| AGGAGCTCCAATGTAGTGAT+TGG | - | chr1_4:32335852-32335871 | Msa0160280:intron | 45.0% | |
| ! | GTCATCTGGTCTTCTGTAAG+AGG | + | chr1_4:32335887-32335906 | None:intergenic | 45.0% |
| CCATAGCTGCATATGTCATC+TGG | + | chr1_4:32335901-32335920 | None:intergenic | 45.0% | |
| CCAGATGACATATGCAGCTA+TGG | - | chr1_4:32335898-32335917 | Msa0160280:intron | 45.0% | |
| ATGGATGCTCATTGCTTGCT+CGG | - | chr1_4:32335917-32335936 | Msa0160280:intron | 45.0% | |
| CCCAAGATTTGCACTTCGAA+TGG | + | chr1_4:32336825-32336844 | None:intergenic | 45.0% | |
| TTCAGGTGATACCTTCAGCA+GGG | - | chr1_4:32336948-32336967 | Msa0160280:intron | 45.0% | |
| ! | TCTCTGGGAAGCCCATTAAT+TGG | + | chr1_4:32337121-32337140 | None:intergenic | 45.0% |
| GAGAACTTTGATGAGTGGCA+AGG | - | chr1_4:32337151-32337170 | Msa0160280:intron | 45.0% | |
| AACTATTGGATCCCAAGGTG+CGG | + | chr1_4:32337179-32337198 | None:intergenic | 45.0% | |
| CACCTTGGGATCCAATAGTT+GGG | - | chr1_4:32337179-32337198 | Msa0160280:intron | 45.0% | |
| ACCTTGGGATCCAATAGTTG+GGG | - | chr1_4:32337180-32337199 | Msa0160280:intron | 45.0% | |
| TATCCATCTCCCCCAACTAT+TGG | + | chr1_4:32337193-32337212 | None:intergenic | 45.0% | |
| ! | GGTTCAGGCTTCTTTGAAGA+AGG | + | chr1_4:32337612-32337631 | None:intergenic | 45.0% |
| CTTCAAAGAAGCCTGAACCA+AGG | - | chr1_4:32337613-32337632 | Msa0160280:intron | 45.0% | |
| AATGTGCTCCCTGCTCATAA+CGG | - | chr1_4:32338048-32338067 | Msa0160280:intron | 45.0% | |
| ! | GAAGCCACTTTCAACTGAAG+AGG | - | chr1_4:32338369-32338388 | Msa0160280:intron | 45.0% |
| AGAGGCTATTGAAGCTGCAA+AGG | - | chr1_4:32338387-32338406 | Msa0160280:intron | 45.0% | |
| GAGGCTATTGAAGCTGCAAA+GGG | - | chr1_4:32338388-32338407 | Msa0160280:intron | 45.0% | |
| CTGTCACCAACTTTATTGGG+AGG | - | chr1_4:32338471-32338490 | Msa0160280:intron | 45.0% | |
| CAACTCGCAACAAACTGAAC+AGG | + | chr1_4:32338506-32338525 | None:intergenic | 45.0% | |
| AAGGATGTGCACGTGAGTAA+TGG | - | chr1_4:32338861-32338880 | Msa0160280:intron | 45.0% | |
| CAGCAACAACAGTTGAGAGA+AGG | + | chr1_4:32339108-32339127 | None:intergenic | 45.0% | |
| TCGGTGGATCCATGTTGAAG+GGG | + | chr1_4:32332627-32332646 | None:intergenic | 50.0% | |
| ! | GTTCGGTGGATCCATGTTGA+AGG | + | chr1_4:32332629-32332648 | None:intergenic | 50.0% |
| ! | GTGACGAAGTGGATTTCGAG+AGG | + | chr1_4:32332658-32332677 | None:intergenic | 50.0% |
| CGAGTTAGGTGAGTGAACTC+GGG | + | chr1_4:32332694-32332713 | None:intergenic | 50.0% | |
| ! | GACGAGGGAGGTTTGAGTTA+GGG | + | chr1_4:32332719-32332738 | None:intergenic | 50.0% |
| CTAACTCAAACCTCCCTCGT+CGG | - | chr1_4:32332718-32332737 | Msa0160280:three_prime_UTR | 50.0% | |
| !! | GAGTTTTGGTGAGTTCGGAC+GGG | + | chr1_4:32332763-32332782 | None:intergenic | 50.0% |
| ! | AGACGGTGGGGAATGAGTTT+TGG | + | chr1_4:32332777-32332796 | None:intergenic | 50.0% |
| ATTTGGAGGAGTGAGACGGT+GGG | + | chr1_4:32332790-32332809 | None:intergenic | 50.0% | |
| CTCCAAATCGCGTGTCAACT+CGG | - | chr1_4:32332802-32332821 | Msa0160280:three_prime_UTR | 50.0% | |
| AAGAGAGAGGGAGGGAGATA+AGG | + | chr1_4:32332855-32332874 | None:intergenic | 50.0% | |
| CCCTCCCTCTCTCTTCAATA+TGG | - | chr1_4:32332860-32332879 | Msa0160280:three_prime_UTR | 50.0% | |
| CCCATATTGAAGAGAGAGGG+AGG | + | chr1_4:32332864-32332883 | None:intergenic | 50.0% | |
| GAAACCAGCATTTCTCGGAG+AGG | + | chr1_4:32332889-32332908 | None:intergenic | 50.0% | |
| CTGCGGAAACCAGCATTTCT+CGG | + | chr1_4:32332894-32332913 | None:intergenic | 50.0% | |
| CCAACTGAGCTAAGCTCATG+AGG | + | chr1_4:32333350-32333369 | None:intergenic | 50.0% | |
| CCTCATGAGCTTAGCTCAGT+TGG | - | chr1_4:32333347-32333366 | Msa0160280:intron | 50.0% | |
| GTATACATTCTCGCGTCCCA+AGG | + | chr1_4:32333549-32333568 | None:intergenic | 50.0% | |
| CTGGGCAAACTATAGACCTC+TGG | - | chr1_4:32336006-32336025 | Msa0160280:CDS | 50.0% | |
| ATTCTACGCTGCAGGAGAGT+TGG | - | chr1_4:32336778-32336797 | Msa0160280:intron | 50.0% | |
| GTTCAGGTGATACCTTCAGC+AGG | - | chr1_4:32336947-32336966 | Msa0160280:intron | 50.0% | |
| TCAGGTGATACCTTCAGCAG+GGG | - | chr1_4:32336949-32336968 | Msa0160280:intron | 50.0% | |
| GCACCTTGGGATCCAATAGT+TGG | - | chr1_4:32337178-32337197 | Msa0160280:intron | 50.0% | |
| CCTTGGGATCCAATAGTTGG+GGG | - | chr1_4:32337181-32337200 | Msa0160280:intron | 50.0% | |
| GATCCAATAGTTGGGGGAGA+TGG | - | chr1_4:32337187-32337206 | Msa0160280:intron | 50.0% | |
| ATGTGCTCCCTGCTCATAAC+GGG | - | chr1_4:32338049-32338068 | Msa0160280:intron | 50.0% | |
| ACTCTAGCCCGTTATGAGCA+GGG | + | chr1_4:32338059-32338078 | None:intergenic | 50.0% | |
| AACTCTAGCCCGTTATGAGC+AGG | + | chr1_4:32338060-32338079 | None:intergenic | 50.0% | |
| CTGGGTTCCCTGAATATGAC+AGG | + | chr1_4:32338774-32338793 | None:intergenic | 50.0% | |
| AAGGATGTGCACGTGAGTAG+TGG | - | chr1_4:32338993-32339012 | Msa0160280:CDS | 50.0% | |
| !! | TCGAGAGGTTTCTGGTTCGG+TGG | + | chr1_4:32332643-32332662 | None:intergenic | 55.0% |
| GTGAGTGAACTCGGGTGAGT+CGG | + | chr1_4:32332686-32332705 | None:intergenic | 55.0% | |
| ! | CGACGAGGGAGGTTTGAGTT+AGG | + | chr1_4:32332720-32332739 | None:intergenic | 55.0% |
| ! | AGTTCGGACGGGTTTCCACT+CGG | + | chr1_4:32332752-32332771 | None:intergenic | 55.0% |
| TTTGGAGGAGTGAGACGGTG+GGG | + | chr1_4:32332789-32332808 | None:intergenic | 55.0% | |
| GATTTGGAGGAGTGAGACGG+TGG | + | chr1_4:32332791-32332810 | None:intergenic | 55.0% | |
| ! | CGCGATTTGGAGGAGTGAGA+CGG | + | chr1_4:32332794-32332813 | None:intergenic | 55.0% |
| ! | CGAGTTGACACGCGATTTGG+AGG | + | chr1_4:32332804-32332823 | None:intergenic | 55.0% |
| GGAACCTCTCCGAGAAATGC+TGG | - | chr1_4:32332882-32332901 | Msa0160280:three_prime_UTR | 55.0% | |
| AAAGTCCGGGGTTCAAACCC+CGG | - | chr1_4:32333398-32333417 | Msa0160280:intron | 55.0% | |
| TGAATCACTGCCCCTGCTGA+AGG | + | chr1_4:32336962-32336981 | None:intergenic | 55.0% | |
| CCCCCAACTATTGGATCCCA+AGG | + | chr1_4:32337184-32337203 | None:intergenic | 55.0% | |
| ! | AGTCGGTGGTGGTGACGAAG+TGG | + | chr1_4:32332669-32332688 | None:intergenic | 60.0% |
| AGTGAACTCGGGTGAGTCGG+TGG | + | chr1_4:32332683-32332702 | None:intergenic | 60.0% | |
| ! | CGCCGAGTTGACACGCGATT+TGG | + | chr1_4:32332807-32332826 | None:intergenic | 60.0% |
| GGAGGGAGATAAGGTCGAGG+AGG | + | chr1_4:32332846-32332865 | None:intergenic | 60.0% | |
| GAGGGAGGGAGATAAGGTCG+AGG | + | chr1_4:32332849-32332868 | None:intergenic | 60.0% | |
| CAGGCAACGGTTGCCGAAGA+AGG | - | chr1_4:32335956-32335975 | Msa0160280:intron | 60.0% | |
| !! | AGTGGCAAGGTACCGCACCT+TGG | - | chr1_4:32337164-32337183 | Msa0160280:intron | 60.0% |
| !! | GTGGCAAGGTACCGCACCTT+GGG | - | chr1_4:32337165-32337184 | Msa0160280:intron | 60.0% |
| ! | CGGGCTAGAGTTTGAGCCCA+TGG | - | chr1_4:32338068-32338087 | Msa0160280:intron | 60.0% |
| GAACTCGGGTGAGTCGGTGG+TGG | + | chr1_4:32332680-32332699 | None:intergenic | 65.0% | |
| ! | CTCGGCGTCGAGTCCGACGA+GGG | + | chr1_4:32332734-32332753 | None:intergenic | 70.0% |
| ! | ACTCGGCGTCGAGTCCGACG+AGG | + | chr1_4:32332735-32332754 | None:intergenic | 70.0% |
| TCGTCGGACTCGACGCCGAG+TGG | - | chr1_4:32332734-32332753 | Msa0160280:three_prime_UTR | 70.0% | |
| GGTGGCCGGGGTTTGAACCC+CGG | + | chr1_4:32333406-32333425 | None:intergenic | 70.0% | |
| ! | GGCGTCGAGTCCGACGAGGG+AGG | + | chr1_4:32332731-32332750 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 32332557 | 32339377 | 32332557 | ID=Msa0160280;Name=Msa0160280 |
| chr1_4 | mRNA | 32332557 | 32339377 | 32332557 | ID=Msa0160280-mRNA-1;Parent=Msa0160280;Name=Msa0160280-mRNA-1;_AED=0.15;_eAED=0.15;_QI=77|1|1|1|1|1|8|530|513 |
| chr1_4 | exon | 32332557 | 32333149 | 32332557 | ID=Msa0160280-mRNA-1:exon:10249;Parent=Msa0160280-mRNA-1 |
| chr1_4 | exon | 32333442 | 32333645 | 32333442 | ID=Msa0160280-mRNA-1:exon:10248;Parent=Msa0160280-mRNA-1 |
| chr1_4 | exon | 32334049 | 32334172 | 32334049 | ID=Msa0160280-mRNA-1:exon:10247;Parent=Msa0160280-mRNA-1 |
| chr1_4 | exon | 32334300 | 32334376 | 32334300 | ID=Msa0160280-mRNA-1:exon:10246;Parent=Msa0160280-mRNA-1 |
| chr1_4 | exon | 32334697 | 32335142 | 32334697 | ID=Msa0160280-mRNA-1:exon:10245;Parent=Msa0160280-mRNA-1 |
| chr1_4 | exon | 32335957 | 32336080 | 32335957 | ID=Msa0160280-mRNA-1:exon:10244;Parent=Msa0160280-mRNA-1 |
| chr1_4 | exon | 32337887 | 32338018 | 32337887 | ID=Msa0160280-mRNA-1:exon:10243;Parent=Msa0160280-mRNA-1 |
| chr1_4 | exon | 32338929 | 32339377 | 32338929 | ID=Msa0160280-mRNA-1:exon:10242;Parent=Msa0160280-mRNA-1 |
| chr1_4 | five_prime_UTR | 32339301 | 32339377 | 32339301 | ID=Msa0160280-mRNA-1:five_prime_utr;Parent=Msa0160280-mRNA-1 |
| chr1_4 | CDS | 32338929 | 32339300 | 32338929 | ID=Msa0160280-mRNA-1:cds;Parent=Msa0160280-mRNA-1 |
| chr1_4 | CDS | 32337887 | 32338018 | 32337887 | ID=Msa0160280-mRNA-1:cds;Parent=Msa0160280-mRNA-1 |
| chr1_4 | CDS | 32335957 | 32336080 | 32335957 | ID=Msa0160280-mRNA-1:cds;Parent=Msa0160280-mRNA-1 |
| chr1_4 | CDS | 32334697 | 32335142 | 32334697 | ID=Msa0160280-mRNA-1:cds;Parent=Msa0160280-mRNA-1 |
| chr1_4 | CDS | 32334300 | 32334376 | 32334300 | ID=Msa0160280-mRNA-1:cds;Parent=Msa0160280-mRNA-1 |
| chr1_4 | CDS | 32334049 | 32334172 | 32334049 | ID=Msa0160280-mRNA-1:cds;Parent=Msa0160280-mRNA-1 |
| chr1_4 | CDS | 32333442 | 32333645 | 32333442 | ID=Msa0160280-mRNA-1:cds;Parent=Msa0160280-mRNA-1 |
| chr1_4 | CDS | 32333087 | 32333149 | 32333087 | ID=Msa0160280-mRNA-1:cds;Parent=Msa0160280-mRNA-1 |
| chr1_4 | three_prime_UTR | 32332557 | 32333086 | 32332557 | ID=Msa0160280-mRNA-1:three_prime_utr;Parent=Msa0160280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
