AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0018390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0018390 MtrunA17_Chr1g0171011 86.429 140 17 1 68 207 1 138 3.92e-76 225
Msa0018390 MtrunA17_Chr1g0171021 96.203 79 3 0 11 89 298 376 1.32e-47 162
Msa0018390 MtrunA17_Chr1g0199441 54.286 140 60 1 66 205 11 146 1.57e-42 140
Msa0018390 MtrunA17_Chr7g0239021 37.398 246 100 4 11 204 304 547 1.83e-41 147
Msa0018390 MtrunA17_Chr7g0239011 36.179 246 104 3 11 204 207 451 1.04e-37 135
Msa0018390 MtrunA17_Chr7g0256281 34.728 239 112 2 9 204 285 522 5.06e-37 134
Msa0018390 MtrunA17_Chr4g0022261 34.440 241 99 6 17 202 285 521 1.79e-34 127
Msa0018390 MtrunA17_Chr7g0217381 29.719 249 123 3 8 205 183 430 3.21e-31 117
Msa0018390 MtrunA17_Chr7g0217401 29.675 246 121 3 11 205 187 431 6.45e-30 114
Msa0018390 MtrunA17_Chr3g0090101 31.250 208 92 2 11 168 140 346 9.94e-30 113
Msa0018390 MtrunA17_Chr1g0199431 63.291 79 27 2 11 89 297 373 4.03e-26 104
Msa0018390 MtrunA17_Chr3g0105861 26.848 257 132 6 3 205 177 431 5.28e-26 103
Msa0018390 MtrunA17_Chr7g0256241 43.363 113 64 0 90 202 2 114 1.07e-24 93.6
Msa0018390 MtrunA17_Chr8g0361631 29.469 207 88 5 17 170 171 372 4.58e-23 95.5
Msa0018390 MtrunA17_Chr8g0361641 27.885 208 92 5 16 170 130 332 1.69e-20 87.8
Msa0018390 MtrunA17_Chr8g0361211 25.359 209 97 5 17 172 215 417 5.02e-18 81.6
Msa0018390 MtrunA17_Chr8g0361591 30.052 193 85 5 27 170 141 332 5.25e-18 80.9
Msa0018390 MtrunA17_Chr7g0256251 45.570 79 42 1 11 89 287 364 7.49e-17 78.2
Msa0018390 MtrunA17_Chr3g0105821 32.479 117 76 2 91 205 35 150 2.51e-14 67.4
Msa0018390 MtrunA17_Chr3g0105831 35.294 85 53 1 3 85 124 208 6.28e-14 67.8
Msa0018390 MtrunA17_Chr3g0122241 24.291 247 117 5 17 202 229 466 4.24e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0018390 AT2G39130.2 49.388 245 73 2 11 205 305 548 1.89e-69 221
Msa0018390 AT2G39130.1 49.388 245 73 2 11 205 305 548 1.89e-69 221
Msa0018390 AT5G02180.1 37.238 239 99 2 17 205 311 548 5.19e-45 157
Msa0018390 AT5G02180.2 37.238 239 99 2 17 205 311 548 5.19e-45 157
Msa0018390 AT2G39130.3 46.667 180 45 2 11 140 305 483 5.63e-44 153
Msa0018390 AT3G09340.1 36.585 246 104 3 11 205 279 523 1.42e-42 150
Msa0018390 AT3G09330.1 36.179 246 105 3 11 205 279 523 1.83e-41 147
Msa0018390 AT3G54830.2 43.284 201 56 4 11 154 295 494 4.71e-40 143
Msa0018390 AT3G54830.1 43.284 201 56 4 11 154 295 494 4.71e-40 143
Msa0018390 AT5G02170.1 37.652 247 101 3 11 205 280 525 6.84e-39 140
Msa0018390 AT2G41190.1 31.405 242 115 2 11 202 292 532 4.84e-38 138
Msa0018390 AT5G02170.2 36.406 217 85 3 11 175 251 466 3.23e-35 129
Msa0018390 AT3G28960.4 26.908 249 122 4 11 204 92 335 1.10e-25 102
Msa0018390 AT3G28960.5 26.908 249 122 4 11 204 161 404 2.41e-25 102
Msa0018390 AT3G28960.2 26.908 249 122 4 11 204 161 404 2.41e-25 102
Msa0018390 AT3G28960.3 26.908 249 122 4 11 204 161 404 2.41e-25 102
Msa0018390 AT3G28960.1 26.908 249 122 4 11 204 161 404 2.41e-25 102
Msa0018390 AT5G15240.3 26.531 245 129 2 11 204 92 336 2.30e-22 93.2
Msa0018390 AT5G15240.1 26.531 245 129 2 11 204 178 422 4.49e-22 93.2
Msa0018390 AT2G41190.2 27.568 185 83 2 11 145 292 475 7.46e-19 84.3

Find 63 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAAGTTAACTCGAAATT+TGG 0.159623 1_1:-30804091 None:intergenic
CCTGTTGCTGTTGGTCTCTA+TGG 0.216394 1_1:+30802093 Msa0018390:CDS
AACTGAAAGTTGGGATTATT+TGG 0.222355 1_1:-30803038 None:intergenic
GGTTTGGTAATGTCGTTAAT+TGG 0.234615 1_1:+30803307 Msa0018390:intron
AACGAAAGACTAACCGAAAA+AGG 0.249750 1_1:-30803123 None:intergenic
TACCAAGTCAAGAGTACTTT+AGG 0.272613 1_1:-30802183 None:intergenic
AACAAGCAGATGGTAGAATA+AGG 0.277870 1_1:-30803450 None:intergenic
GAAAAGTTAACTCGAAATTT+GGG 0.288027 1_1:-30804090 None:intergenic
GGTCTTGTATCGTGTGGTTT+TGG 0.290875 1_1:+30803925 Msa0018390:CDS
ACTTCAAACAATCTCAGATT+TGG 0.321972 1_1:-30804240 None:intergenic
GCAGACAAATGTCATAATTC+AGG 0.322634 1_1:-30804011 None:intergenic
CACAAGTAAAAGTAACAAAA+TGG 0.337829 1_1:-30804129 None:intergenic
GCCATAGCTGTATACAGATT+CGG 0.360626 1_1:-30802144 None:intergenic
CCATAGAGACCAACAGCAAC+AGG 0.369630 1_1:-30802093 None:intergenic
CCATAGCTGTATACAGATTC+GGG 0.379742 1_1:-30802143 None:intergenic
TCTAAAGCAGTTATATGAAC+TGG 0.382303 1_1:-30804052 None:intergenic
TTCTGCCTCCCTTGATGCTT+AGG 0.395362 1_1:-30803474 None:intergenic
GTTTGGTAATGTCGTTAATT+GGG 0.399239 1_1:+30803308 Msa0018390:CDS
ACCAAGTCAAGAGTACTTTA+GGG 0.401734 1_1:-30802182 None:intergenic
GTGATTTCTACACTGCTTGT+TGG 0.405536 1_1:+30803089 Msa0018390:CDS
CAGTTATATGAACTGGAATC+TGG 0.407781 1_1:-30804045 None:intergenic
AGTGGTACTGTGCTTGTTGT+GGG 0.419401 1_1:+30802005 Msa0018390:CDS
TCCTCTAGCGACAATGCTAC+TGG 0.425490 1_1:-30803005 None:intergenic
CTCTATGGTTATTGCTTCGC+AGG 0.439069 1_1:+30802108 Msa0018390:CDS
TCAACATTCCCTGTTGCTGT+TGG 0.442672 1_1:+30802084 Msa0018390:CDS
TATTGTTCCTTCTGTATGCA+TGG 0.471552 1_1:-30802049 None:intergenic
TAGTGGTACTGTGCTTGTTG+TGG 0.473014 1_1:+30802004 Msa0018390:CDS
AGGCAGAATCAAGCGCTCTC+AGG 0.479863 1_1:+30803489 Msa0018390:CDS
GATGGAGTAGAACTGAAAGT+TGG 0.481778 1_1:-30803048 None:intergenic
GTACTGTGCTTGTTGTGGGT+TGG 0.486084 1_1:+30802009 Msa0018390:CDS
ATGGAGTAGAACTGAAAGTT+GGG 0.494516 1_1:-30803047 None:intergenic
GATGCATAAAATTGTGGATG+AGG 0.495704 1_1:+30804292 Msa0018390:three_prime_UTR
TGCTTGTTTCCTAAGCATCA+AGG 0.496356 1_1:+30803465 Msa0018390:CDS
AACTTCTCCAAACTTCAAAA+CGG 0.505355 1_1:-30804195 None:intergenic
TGAAAGTTGGGATTATTTGG+TGG 0.515485 1_1:-30803035 None:intergenic
GTTAACTCGAAATTTGGGGT+TGG 0.515626 1_1:-30804085 None:intergenic
ACAAGCAGATGGTAGAATAA+GGG 0.516078 1_1:-30803449 None:intergenic
TCCCTAAAGTACTCTTGACT+TGG 0.516343 1_1:+30802181 Msa0018390:CDS
TCTTCTGTTGTACCAGCTTG+CGG 0.526870 1_1:+30801964 Msa0018390:CDS
CCCGAATCTGTATACAGCTA+TGG 0.532035 1_1:+30802143 Msa0018390:CDS
ATTGTTCCTTCTGTATGCAT+GGG 0.532915 1_1:-30802048 None:intergenic
TGGATCATACTCGGCCATCT+CGG 0.557121 1_1:+30803945 Msa0018390:CDS
GCTTGTTTCCTAAGCATCAA+GGG 0.562510 1_1:+30803466 Msa0018390:CDS
GTGCTTGTTGTGGGTTGGAG+TGG 0.564481 1_1:+30802014 Msa0018390:CDS
TACAACAAACATTGTGAGCA+AGG 0.575692 1_1:-30803332 None:intergenic
ATAGTAGGTCTTGTATCGTG+TGG 0.582289 1_1:+30803919 Msa0018390:CDS
TCCAGTAGCATTGTCGCTAG+AGG 0.588303 1_1:+30803004 Msa0018390:CDS
TTCCGCAATCATCTCCGAGA+TGG 0.597266 1_1:-30803959 None:intergenic
GTTGCAATCACTCCGCAAGC+TGG 0.597903 1_1:-30801976 None:intergenic
AGTGATTGCAACGGTTGTAG+TGG 0.598466 1_1:+30801987 Msa0018390:CDS
AAAAGTTAACTCGAAATTTG+GGG 0.601878 1_1:-30804089 None:intergenic
TAATGCTGTTCTGATGCAGA+TGG 0.616237 1_1:-30803066 None:intergenic
GATGTTCCCATGCATACAGA+AGG 0.625864 1_1:+30802042 Msa0018390:CDS
TGTGTTACAGTGGTTATAGT+AGG 0.628179 1_1:+30803904 Msa0018390:CDS
GGCCATCTCGGAGATGATTG+CGG 0.635859 1_1:+30803957 Msa0018390:CDS
ATGCTTAGGAAACAAGCAGA+TGG 0.636166 1_1:-30803460 None:intergenic
CATAGAGACCAACAGCAACA+GGG 0.640777 1_1:-30802092 None:intergenic
AGTTAGACTCAAAGCATATG+TGG 0.647151 1_1:-30802982 None:intergenic
GAGAAGTTAAACATATACTG+TGG 0.668442 1_1:+30804210 Msa0018390:three_prime_UTR
GGTACTACTATGTGTTACAG+TGG 0.680801 1_1:+30803894 Msa0018390:intron
TGTTTCCTAAGCATCAAGGG+AGG 0.709220 1_1:+30803469 Msa0018390:CDS
AGCTTGCGGAGTGATTGCAA+CGG 0.716437 1_1:+30801978 Msa0018390:CDS
CAGAAGGAACAATAACACTG+AGG 0.765802 1_1:+30802058 Msa0018390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATATAGCACTTATAA+AGG - chr1_1:30802776-30802795 None:intergenic 15.0%
!! TAAACAAAATATTAAAGTGA+CGG - chr1_1:30803160-30803179 None:intergenic 15.0%
!!! ATTTTATATAGCACTTATAA+AGG - chr1_1:30802776-30802795 None:intergenic 15.0%
!! TAAACAAAATATTAAAGTGA+CGG - chr1_1:30803160-30803179 None:intergenic 15.0%
!! TATAAAGGATATTTGGTAAA+TGG - chr1_1:30802761-30802780 None:intergenic 20.0%
!! AAGAAATGGTTCAAAATATT+TGG - chr1_1:30803805-30803824 None:intergenic 20.0%
!! AATAACTATAGAACAAGAAA+TGG - chr1_1:30803819-30803838 None:intergenic 20.0%
!!! AGTGATCAAATGTTTTATTT+AGG + chr1_1:30804260-30804279 Msa0018390:three_prime_UTR 20.0%
!!! GTGATCAAATGTTTTATTTA+GGG + chr1_1:30804261-30804280 Msa0018390:three_prime_UTR 20.0%
!!! TGATCAAATGTTTTATTTAG+GGG + chr1_1:30804262-30804281 Msa0018390:three_prime_UTR 20.0%
!!! AATTTTGATGCATAAAATTG+TGG + chr1_1:30804286-30804305 Msa0018390:three_prime_UTR 20.0%
!! TATAAAGGATATTTGGTAAA+TGG - chr1_1:30802761-30802780 None:intergenic 20.0%
!! AAGAAATGGTTCAAAATATT+TGG - chr1_1:30803805-30803824 None:intergenic 20.0%
!! AATAACTATAGAACAAGAAA+TGG - chr1_1:30803819-30803838 None:intergenic 20.0%
!!! AGTGATCAAATGTTTTATTT+AGG + chr1_1:30804260-30804279 Msa0018390:three_prime_UTR 20.0%
!!! GTGATCAAATGTTTTATTTA+GGG + chr1_1:30804261-30804280 Msa0018390:three_prime_UTR 20.0%
!!! TGATCAAATGTTTTATTTAG+GGG + chr1_1:30804262-30804281 Msa0018390:three_prime_UTR 20.0%
!!! AATTTTGATGCATAAAATTG+TGG + chr1_1:30804286-30804305 Msa0018390:three_prime_UTR 20.0%
! TACAATTTCAAGATGAAAGT+GGG - chr1_1:30802241-30802260 None:intergenic 25.0%
! AAGAAACTTAAAAGAAATCG+TGG - chr1_1:30802446-30802465 None:intergenic 25.0%
! TCTTATTAAACTTTGCTACT+TGG + chr1_1:30802681-30802700 Msa0018390:intron 25.0%
! TAGCACTTATAAAGGATATT+TGG - chr1_1:30802768-30802787 None:intergenic 25.0%
! AAAATTAGAGCTAAGAGATA+AGG - chr1_1:30802831-30802850 None:intergenic 25.0%
! AAAACAGTAAATTTACGACT+TGG - chr1_1:30803537-30803556 None:intergenic 25.0%
! CTTGTAACAAAAATATACGA+TGG - chr1_1:30803781-30803800 None:intergenic 25.0%
!!! TTTCCTTTTCATATTTCTAC+AGG + chr1_1:30803873-30803892 Msa0018390:intron 25.0%
! AAAAGTTAACTCGAAATTTG+GGG - chr1_1:30804092-30804111 None:intergenic 25.0%
! GAAAAGTTAACTCGAAATTT+GGG - chr1_1:30804093-30804112 None:intergenic 25.0%
! TGAAAAGTTAACTCGAAATT+TGG - chr1_1:30804094-30804113 None:intergenic 25.0%
! CACAAGTAAAAGTAACAAAA+TGG - chr1_1:30804132-30804151 None:intergenic 25.0%
!!! CATTTTGTTACTTTTACTTG+TGG + chr1_1:30804130-30804149 Msa0018390:three_prime_UTR 25.0%
!!! CAAAACTTTGTTTTGTGATA+TGG - chr1_1:30804173-30804192 None:intergenic 25.0%
! TACAATTTCAAGATGAAAGT+GGG - chr1_1:30802241-30802260 None:intergenic 25.0%
! AAGAAACTTAAAAGAAATCG+TGG - chr1_1:30802446-30802465 None:intergenic 25.0%
! TCTTATTAAACTTTGCTACT+TGG + chr1_1:30802681-30802700 Msa0018390:intron 25.0%
! TAGCACTTATAAAGGATATT+TGG - chr1_1:30802768-30802787 None:intergenic 25.0%
! AAAATTAGAGCTAAGAGATA+AGG - chr1_1:30802831-30802850 None:intergenic 25.0%
! AAAACAGTAAATTTACGACT+TGG - chr1_1:30803537-30803556 None:intergenic 25.0%
! CTTGTAACAAAAATATACGA+TGG - chr1_1:30803781-30803800 None:intergenic 25.0%
!!! TTTCCTTTTCATATTTCTAC+AGG + chr1_1:30803873-30803892 Msa0018390:intron 25.0%
! AAAAGTTAACTCGAAATTTG+GGG - chr1_1:30804092-30804111 None:intergenic 25.0%
! GAAAAGTTAACTCGAAATTT+GGG - chr1_1:30804093-30804112 None:intergenic 25.0%
! TGAAAAGTTAACTCGAAATT+TGG - chr1_1:30804094-30804113 None:intergenic 25.0%
! CACAAGTAAAAGTAACAAAA+TGG - chr1_1:30804132-30804151 None:intergenic 25.0%
!!! CATTTTGTTACTTTTACTTG+TGG + chr1_1:30804130-30804149 Msa0018390:three_prime_UTR 25.0%
!!! CAAAACTTTGTTTTGTGATA+TGG - chr1_1:30804173-30804192 None:intergenic 25.0%
CTACAATTTCAAGATGAAAG+TGG - chr1_1:30802242-30802261 None:intergenic 30.0%
ACTTAAAAGAAATCGTGGTT+GGG - chr1_1:30802441-30802460 None:intergenic 30.0%
AACTTAAAAGAAATCGTGGT+TGG - chr1_1:30802442-30802461 None:intergenic 30.0%
! TTAGAGGGTACATAAATTAG+AGG - chr1_1:30802930-30802949 None:intergenic 30.0%
!! CATCCATTTTTCATCTTAGA+GGG - chr1_1:30802945-30802964 None:intergenic 30.0%
!! ACATCCATTTTTCATCTTAG+AGG - chr1_1:30802946-30802965 None:intergenic 30.0%
AACTGAAAGTTGGGATTATT+TGG - chr1_1:30803041-30803060 None:intergenic 30.0%
! TGATTTTATTGTTGCACTGT+TGG + chr1_1:30803270-30803289 Msa0018390:intron 30.0%
!! GTTTGGTAATGTCGTTAATT+GGG + chr1_1:30803308-30803327 Msa0018390:CDS 30.0%
CTGAATCAAACAGTTAATGA+AGG - chr1_1:30803363-30803382 None:intergenic 30.0%
TATCGGGTTTAAGTAAACAA+AGG + chr1_1:30803655-30803674 Msa0018390:intron 30.0%
GAAAAAAACGATAGTCAGAT+TGG - chr1_1:30803857-30803876 None:intergenic 30.0%
GTACCTGTAGAAATATGAAA+AGG - chr1_1:30803879-30803898 None:intergenic 30.0%
! AATGTTTGCATGAAGTTTTG+CGG + chr1_1:30803981-30804000 Msa0018390:exon 30.0%
! TCTAAAGCAGTTATATGAAC+TGG - chr1_1:30804055-30804074 None:intergenic 30.0%
AACTTCTCCAAACTTCAAAA+CGG - chr1_1:30804198-30804217 None:intergenic 30.0%
GAGAAGTTAAACATATACTG+TGG + chr1_1:30804210-30804229 Msa0018390:three_prime_UTR 30.0%
ACTTCAAACAATCTCAGATT+TGG - chr1_1:30804243-30804262 None:intergenic 30.0%
CTACAATTTCAAGATGAAAG+TGG - chr1_1:30802242-30802261 None:intergenic 30.0%
ACTTAAAAGAAATCGTGGTT+GGG - chr1_1:30802441-30802460 None:intergenic 30.0%
AACTTAAAAGAAATCGTGGT+TGG - chr1_1:30802442-30802461 None:intergenic 30.0%
! TTAGAGGGTACATAAATTAG+AGG - chr1_1:30802930-30802949 None:intergenic 30.0%
!! CATCCATTTTTCATCTTAGA+GGG - chr1_1:30802945-30802964 None:intergenic 30.0%
!! ACATCCATTTTTCATCTTAG+AGG - chr1_1:30802946-30802965 None:intergenic 30.0%
AACTGAAAGTTGGGATTATT+TGG - chr1_1:30803041-30803060 None:intergenic 30.0%
! TGATTTTATTGTTGCACTGT+TGG + chr1_1:30803270-30803289 Msa0018390:intron 30.0%
!! GTTTGGTAATGTCGTTAATT+GGG + chr1_1:30803308-30803327 Msa0018390:CDS 30.0%
CTGAATCAAACAGTTAATGA+AGG - chr1_1:30803363-30803382 None:intergenic 30.0%
TATCGGGTTTAAGTAAACAA+AGG + chr1_1:30803655-30803674 Msa0018390:intron 30.0%
GAAAAAAACGATAGTCAGAT+TGG - chr1_1:30803857-30803876 None:intergenic 30.0%
GTACCTGTAGAAATATGAAA+AGG - chr1_1:30803879-30803898 None:intergenic 30.0%
! AATGTTTGCATGAAGTTTTG+CGG + chr1_1:30803981-30804000 Msa0018390:exon 30.0%
! TCTAAAGCAGTTATATGAAC+TGG - chr1_1:30804055-30804074 None:intergenic 30.0%
AACTTCTCCAAACTTCAAAA+CGG - chr1_1:30804198-30804217 None:intergenic 30.0%
GAGAAGTTAAACATATACTG+TGG + chr1_1:30804210-30804229 Msa0018390:three_prime_UTR 30.0%
ACTTCAAACAATCTCAGATT+TGG - chr1_1:30804243-30804262 None:intergenic 30.0%
ATTGTTCCTTCTGTATGCAT+GGG - chr1_1:30802051-30802070 None:intergenic 35.0%
TATTGTTCCTTCTGTATGCA+TGG - chr1_1:30802052-30802071 None:intergenic 35.0%
!! ACCAAGTCAAGAGTACTTTA+GGG - chr1_1:30802185-30802204 None:intergenic 35.0%
!! TACCAAGTCAAGAGTACTTT+AGG - chr1_1:30802186-30802205 None:intergenic 35.0%
! CTGACAATGTGTTTCTAAGT+GGG + chr1_1:30802371-30802390 Msa0018390:intron 35.0%
! TGACAATGTGTTTCTAAGTG+GGG + chr1_1:30802372-30802391 Msa0018390:intron 35.0%
TATACTCTTAACATGCCTCA+AGG + chr1_1:30802583-30802602 Msa0018390:intron 35.0%
!!! TATCGTGTGTTTTGTTTTGC+AGG + chr1_1:30802727-30802746 Msa0018390:intron 35.0%
ATTAGAGCTAAGAGATAAGG+TGG - chr1_1:30802828-30802847 None:intergenic 35.0%
!! GTACCCTCTAAGATGAAAAA+TGG + chr1_1:30802939-30802958 Msa0018390:intron 35.0%
AGTTAGACTCAAAGCATATG+TGG - chr1_1:30802985-30803004 None:intergenic 35.0%
TGAAAGTTGGGATTATTTGG+TGG - chr1_1:30803038-30803057 None:intergenic 35.0%
ATGGAGTAGAACTGAAAGTT+GGG - chr1_1:30803050-30803069 None:intergenic 35.0%
ACGAAAGACTAACCGAAAAA+GGG - chr1_1:30803125-30803144 None:intergenic 35.0%
AACGAAAGACTAACCGAAAA+AGG - chr1_1:30803126-30803145 None:intergenic 35.0%
!! CTGTTGGATTATGTTTTTGC+AGG + chr1_1:30803286-30803305 Msa0018390:intron 35.0%
!! GGATTATGTTTTTGCAGGTT+TGG + chr1_1:30803291-30803310 Msa0018390:intron 35.0%
!! GGTTTGGTAATGTCGTTAAT+TGG + chr1_1:30803307-30803326 Msa0018390:intron 35.0%
TACAACAAACATTGTGAGCA+AGG - chr1_1:30803335-30803354 None:intergenic 35.0%
AGAATAAGGGACTGCATTAA+TGG - chr1_1:30803439-30803458 None:intergenic 35.0%
ACAAGCAGATGGTAGAATAA+GGG - chr1_1:30803452-30803471 None:intergenic 35.0%
AACAAGCAGATGGTAGAATA+AGG - chr1_1:30803453-30803472 None:intergenic 35.0%
! AGCTTTAGTCTGTTGATACA+TGG + chr1_1:30803631-30803650 Msa0018390:intron 35.0%
GTCTGTTGATACATGGTTAT+CGG + chr1_1:30803638-30803657 Msa0018390:intron 35.0%
TCTGTTGATACATGGTTATC+GGG + chr1_1:30803639-30803658 Msa0018390:intron 35.0%
AAAAACGATAGTCAGATTGG+AGG - chr1_1:30803854-30803873 None:intergenic 35.0%
TGTGTTACAGTGGTTATAGT+AGG + chr1_1:30803904-30803923 Msa0018390:CDS 35.0%
GCAGACAAATGTCATAATTC+AGG - chr1_1:30804014-30804033 None:intergenic 35.0%
CAGTTATATGAACTGGAATC+TGG - chr1_1:30804048-30804067 None:intergenic 35.0%
! AGTTAACTTTTCACTCTCAG+TGG + chr1_1:30804101-30804120 Msa0018390:three_prime_UTR 35.0%
!!! TTTTGCTCCGTTTTGAAGTT+TGG + chr1_1:30804188-30804207 Msa0018390:three_prime_UTR 35.0%
GATGCATAAAATTGTGGATG+AGG + chr1_1:30804292-30804311 Msa0018390:three_prime_UTR 35.0%
ATTGTTCCTTCTGTATGCAT+GGG - chr1_1:30802051-30802070 None:intergenic 35.0%
TATTGTTCCTTCTGTATGCA+TGG - chr1_1:30802052-30802071 None:intergenic 35.0%
!! ACCAAGTCAAGAGTACTTTA+GGG - chr1_1:30802185-30802204 None:intergenic 35.0%
!! TACCAAGTCAAGAGTACTTT+AGG - chr1_1:30802186-30802205 None:intergenic 35.0%
! CTGACAATGTGTTTCTAAGT+GGG + chr1_1:30802371-30802390 Msa0018390:intron 35.0%
! TGACAATGTGTTTCTAAGTG+GGG + chr1_1:30802372-30802391 Msa0018390:intron 35.0%
TATACTCTTAACATGCCTCA+AGG + chr1_1:30802583-30802602 Msa0018390:intron 35.0%
!!! TATCGTGTGTTTTGTTTTGC+AGG + chr1_1:30802727-30802746 Msa0018390:intron 35.0%
ATTAGAGCTAAGAGATAAGG+TGG - chr1_1:30802828-30802847 None:intergenic 35.0%
!! GTACCCTCTAAGATGAAAAA+TGG + chr1_1:30802939-30802958 Msa0018390:intron 35.0%
AGTTAGACTCAAAGCATATG+TGG - chr1_1:30802985-30803004 None:intergenic 35.0%
TGAAAGTTGGGATTATTTGG+TGG - chr1_1:30803038-30803057 None:intergenic 35.0%
ATGGAGTAGAACTGAAAGTT+GGG - chr1_1:30803050-30803069 None:intergenic 35.0%
ACGAAAGACTAACCGAAAAA+GGG - chr1_1:30803125-30803144 None:intergenic 35.0%
AACGAAAGACTAACCGAAAA+AGG - chr1_1:30803126-30803145 None:intergenic 35.0%
!! CTGTTGGATTATGTTTTTGC+AGG + chr1_1:30803286-30803305 Msa0018390:intron 35.0%
!! GGATTATGTTTTTGCAGGTT+TGG + chr1_1:30803291-30803310 Msa0018390:intron 35.0%
!! GGTTTGGTAATGTCGTTAAT+TGG + chr1_1:30803307-30803326 Msa0018390:intron 35.0%
TACAACAAACATTGTGAGCA+AGG - chr1_1:30803335-30803354 None:intergenic 35.0%
AGAATAAGGGACTGCATTAA+TGG - chr1_1:30803439-30803458 None:intergenic 35.0%
ACAAGCAGATGGTAGAATAA+GGG - chr1_1:30803452-30803471 None:intergenic 35.0%
AACAAGCAGATGGTAGAATA+AGG - chr1_1:30803453-30803472 None:intergenic 35.0%
! AGCTTTAGTCTGTTGATACA+TGG + chr1_1:30803631-30803650 Msa0018390:intron 35.0%
GTCTGTTGATACATGGTTAT+CGG + chr1_1:30803638-30803657 Msa0018390:intron 35.0%
TCTGTTGATACATGGTTATC+GGG + chr1_1:30803639-30803658 Msa0018390:intron 35.0%
AAAAACGATAGTCAGATTGG+AGG - chr1_1:30803854-30803873 None:intergenic 35.0%
TGTGTTACAGTGGTTATAGT+AGG + chr1_1:30803904-30803923 Msa0018390:CDS 35.0%
GCAGACAAATGTCATAATTC+AGG - chr1_1:30804014-30804033 None:intergenic 35.0%
CAGTTATATGAACTGGAATC+TGG - chr1_1:30804048-30804067 None:intergenic 35.0%
! AGTTAACTTTTCACTCTCAG+TGG + chr1_1:30804101-30804120 Msa0018390:three_prime_UTR 35.0%
!!! TTTTGCTCCGTTTTGAAGTT+TGG + chr1_1:30804188-30804207 Msa0018390:three_prime_UTR 35.0%
GATGCATAAAATTGTGGATG+AGG + chr1_1:30804292-30804311 Msa0018390:three_prime_UTR 35.0%
CAGAAGGAACAATAACACTG+AGG + chr1_1:30802058-30802077 Msa0018390:CDS 40.0%
CCATAGCTGTATACAGATTC+GGG - chr1_1:30802146-30802165 None:intergenic 40.0%
GCCATAGCTGTATACAGATT+CGG - chr1_1:30802147-30802166 None:intergenic 40.0%
! TCCCTAAAGTACTCTTGACT+TGG + chr1_1:30802181-30802200 Msa0018390:CDS 40.0%
TTAAGAGTCCCACATCTGAT+AGG + chr1_1:30802341-30802360 Msa0018390:intron 40.0%
CCACTTAGAAACACATTGTC+AGG - chr1_1:30802373-30802392 None:intergenic 40.0%
! CCTGACAATGTGTTTCTAAG+TGG + chr1_1:30802370-30802389 Msa0018390:intron 40.0%
! GACAATGTGTTTCTAAGTGG+GGG + chr1_1:30802373-30802392 Msa0018390:intron 40.0%
!! ACTTCACAAGCCAGTTTTGT+GGG + chr1_1:30802404-30802423 Msa0018390:intron 40.0%
TATTTCACCGTAGCTGTTGT+GGG + chr1_1:30802526-30802545 Msa0018390:intron 40.0%
GTTGTGGGATACTCAATGTT+TGG + chr1_1:30802541-30802560 Msa0018390:intron 40.0%
GATGGAGTAGAACTGAAAGT+TGG - chr1_1:30803051-30803070 None:intergenic 40.0%
TAATGCTGTTCTGATGCAGA+TGG - chr1_1:30803069-30803088 None:intergenic 40.0%
GTGATTTCTACACTGCTTGT+TGG + chr1_1:30803089-30803108 Msa0018390:CDS 40.0%
! GGTCTTTCAGTTCCCTTTTT+CGG + chr1_1:30803110-30803129 Msa0018390:CDS 40.0%
ATGCTTAGGAAACAAGCAGA+TGG - chr1_1:30803463-30803482 None:intergenic 40.0%
TGCTTGTTTCCTAAGCATCA+AGG + chr1_1:30803465-30803484 Msa0018390:CDS 40.0%
GCTTGTTTCCTAAGCATCAA+GGG + chr1_1:30803466-30803485 Msa0018390:CDS 40.0%
! TTTTCCAGATGCAAGTCGTT+TGG - chr1_1:30803590-30803609 None:intergenic 40.0%
GGTACTACTATGTGTTACAG+TGG + chr1_1:30803894-30803913 Msa0018390:intron 40.0%
! ATAGTAGGTCTTGTATCGTG+TGG + chr1_1:30803919-30803938 Msa0018390:CDS 40.0%
!!! GTGTGGTTTTGGATCATACT+CGG + chr1_1:30803936-30803955 Msa0018390:CDS 40.0%
! GTTAACTCGAAATTTGGGGT+TGG - chr1_1:30804088-30804107 None:intergenic 40.0%
CAGAAGGAACAATAACACTG+AGG + chr1_1:30802058-30802077 Msa0018390:CDS 40.0%
CCATAGCTGTATACAGATTC+GGG - chr1_1:30802146-30802165 None:intergenic 40.0%
GCCATAGCTGTATACAGATT+CGG - chr1_1:30802147-30802166 None:intergenic 40.0%
! TCCCTAAAGTACTCTTGACT+TGG + chr1_1:30802181-30802200 Msa0018390:CDS 40.0%
TTAAGAGTCCCACATCTGAT+AGG + chr1_1:30802341-30802360 Msa0018390:intron 40.0%
CCACTTAGAAACACATTGTC+AGG - chr1_1:30802373-30802392 None:intergenic 40.0%
! CCTGACAATGTGTTTCTAAG+TGG + chr1_1:30802370-30802389 Msa0018390:intron 40.0%
! GACAATGTGTTTCTAAGTGG+GGG + chr1_1:30802373-30802392 Msa0018390:intron 40.0%
!! ACTTCACAAGCCAGTTTTGT+GGG + chr1_1:30802404-30802423 Msa0018390:intron 40.0%
TATTTCACCGTAGCTGTTGT+GGG + chr1_1:30802526-30802545 Msa0018390:intron 40.0%
GTTGTGGGATACTCAATGTT+TGG + chr1_1:30802541-30802560 Msa0018390:intron 40.0%
GATGGAGTAGAACTGAAAGT+TGG - chr1_1:30803051-30803070 None:intergenic 40.0%
TAATGCTGTTCTGATGCAGA+TGG - chr1_1:30803069-30803088 None:intergenic 40.0%
GTGATTTCTACACTGCTTGT+TGG + chr1_1:30803089-30803108 Msa0018390:CDS 40.0%
! GGTCTTTCAGTTCCCTTTTT+CGG + chr1_1:30803110-30803129 Msa0018390:CDS 40.0%
ATGCTTAGGAAACAAGCAGA+TGG - chr1_1:30803463-30803482 None:intergenic 40.0%
TGCTTGTTTCCTAAGCATCA+AGG + chr1_1:30803465-30803484 Msa0018390:CDS 40.0%
GCTTGTTTCCTAAGCATCAA+GGG + chr1_1:30803466-30803485 Msa0018390:CDS 40.0%
! TTTTCCAGATGCAAGTCGTT+TGG - chr1_1:30803590-30803609 None:intergenic 40.0%
GGTACTACTATGTGTTACAG+TGG + chr1_1:30803894-30803913 Msa0018390:intron 40.0%
! ATAGTAGGTCTTGTATCGTG+TGG + chr1_1:30803919-30803938 Msa0018390:CDS 40.0%
!!! GTGTGGTTTTGGATCATACT+CGG + chr1_1:30803936-30803955 Msa0018390:CDS 40.0%
! GTTAACTCGAAATTTGGGGT+TGG - chr1_1:30804088-30804107 None:intergenic 40.0%
TCTTCTGTTGTACCAGCTTG+CGG + chr1_1:30801964-30801983 Msa0018390:CDS 45.0%
AGTGATTGCAACGGTTGTAG+TGG + chr1_1:30801987-30802006 Msa0018390:CDS 45.0%
! TAGTGGTACTGTGCTTGTTG+TGG + chr1_1:30802004-30802023 Msa0018390:CDS 45.0%
!! AGTGGTACTGTGCTTGTTGT+GGG + chr1_1:30802005-30802024 Msa0018390:CDS 45.0%
GATGTTCCCATGCATACAGA+AGG + chr1_1:30802042-30802061 Msa0018390:CDS 45.0%
TCAACATTCCCTGTTGCTGT+TGG + chr1_1:30802084-30802103 Msa0018390:CDS 45.0%
CATAGAGACCAACAGCAACA+GGG - chr1_1:30802095-30802114 None:intergenic 45.0%
CTCTATGGTTATTGCTTCGC+AGG + chr1_1:30802108-30802127 Msa0018390:CDS 45.0%
CCCGAATCTGTATACAGCTA+TGG + chr1_1:30802143-30802162 Msa0018390:CDS 45.0%
!! AGGAGTGTCTGTGCTTCATA+GGG - chr1_1:30802290-30802309 None:intergenic 45.0%
CACAGACACTCCTCAGATTA+GGG + chr1_1:30802297-30802316 Msa0018390:intron 45.0%
ACAGACACTCCTCAGATTAG+GGG + chr1_1:30802298-30802317 Msa0018390:intron 45.0%
TCTTAACAGTGTCCGATACC+GGG - chr1_1:30802327-30802346 None:intergenic 45.0%
CTCTTAACAGTGTCCGATAC+CGG - chr1_1:30802328-30802347 None:intergenic 45.0%
GGCTATCTCCTATCAGATGT+GGG - chr1_1:30802352-30802371 None:intergenic 45.0%
AGGCTATCTCCTATCAGATG+TGG - chr1_1:30802353-30802372 None:intergenic 45.0%
!! CAAAACTGGCTTGTGAAGTG+AGG - chr1_1:30802403-30802422 None:intergenic 45.0%
! CACTTCACAAGCCAGTTTTG+TGG + chr1_1:30802403-30802422 Msa0018390:intron 45.0%
!! CTTCACAAGCCAGTTTTGTG+GGG + chr1_1:30802405-30802424 Msa0018390:intron 45.0%
CTAACACAACCCCACAAAAC+TGG - chr1_1:30802417-30802436 None:intergenic 45.0%
!! CAGTTTTGTGGGGTTGTGTT+AGG + chr1_1:30802415-30802434 Msa0018390:intron 45.0%
GTATTTCACCGTAGCTGTTG+TGG + chr1_1:30802525-30802544 Msa0018390:intron 45.0%
TGAGTATCCCACAACAGCTA+CGG - chr1_1:30802536-30802555 None:intergenic 45.0%
TTGGAGGCTACTAATCCTTG+AGG - chr1_1:30802601-30802620 None:intergenic 45.0%
! CAAGATTGCTGTGTGGACTA+CGG + chr1_1:30802618-30802637 Msa0018390:intron 45.0%
!!! CGTGTGTTTTGTTTTGCAGG+TGG + chr1_1:30802730-30802749 Msa0018390:intron 45.0%
TGTTTCCTAAGCATCAAGGG+AGG + chr1_1:30803469-30803488 Msa0018390:CDS 45.0%
CAATCCAAACGACTTGCATC+TGG + chr1_1:30803583-30803602 Msa0018390:intron 45.0%
!! GGTCTTGTATCGTGTGGTTT+TGG + chr1_1:30803925-30803944 Msa0018390:CDS 45.0%
TCTTCTGTTGTACCAGCTTG+CGG + chr1_1:30801964-30801983 Msa0018390:CDS 45.0%
AGTGATTGCAACGGTTGTAG+TGG + chr1_1:30801987-30802006 Msa0018390:CDS 45.0%
! TAGTGGTACTGTGCTTGTTG+TGG + chr1_1:30802004-30802023 Msa0018390:CDS 45.0%
!! AGTGGTACTGTGCTTGTTGT+GGG + chr1_1:30802005-30802024 Msa0018390:CDS 45.0%
GATGTTCCCATGCATACAGA+AGG + chr1_1:30802042-30802061 Msa0018390:CDS 45.0%
TCAACATTCCCTGTTGCTGT+TGG + chr1_1:30802084-30802103 Msa0018390:CDS 45.0%
CATAGAGACCAACAGCAACA+GGG - chr1_1:30802095-30802114 None:intergenic 45.0%
CTCTATGGTTATTGCTTCGC+AGG + chr1_1:30802108-30802127 Msa0018390:CDS 45.0%
CCCGAATCTGTATACAGCTA+TGG + chr1_1:30802143-30802162 Msa0018390:CDS 45.0%
!! AGGAGTGTCTGTGCTTCATA+GGG - chr1_1:30802290-30802309 None:intergenic 45.0%
CACAGACACTCCTCAGATTA+GGG + chr1_1:30802297-30802316 Msa0018390:intron 45.0%
ACAGACACTCCTCAGATTAG+GGG + chr1_1:30802298-30802317 Msa0018390:intron 45.0%
TCTTAACAGTGTCCGATACC+GGG - chr1_1:30802327-30802346 None:intergenic 45.0%
CTCTTAACAGTGTCCGATAC+CGG - chr1_1:30802328-30802347 None:intergenic 45.0%
GGCTATCTCCTATCAGATGT+GGG - chr1_1:30802352-30802371 None:intergenic 45.0%
AGGCTATCTCCTATCAGATG+TGG - chr1_1:30802353-30802372 None:intergenic 45.0%
!! CAAAACTGGCTTGTGAAGTG+AGG - chr1_1:30802403-30802422 None:intergenic 45.0%
! CACTTCACAAGCCAGTTTTG+TGG + chr1_1:30802403-30802422 Msa0018390:intron 45.0%
!! CTTCACAAGCCAGTTTTGTG+GGG + chr1_1:30802405-30802424 Msa0018390:intron 45.0%
CTAACACAACCCCACAAAAC+TGG - chr1_1:30802417-30802436 None:intergenic 45.0%
!! CAGTTTTGTGGGGTTGTGTT+AGG + chr1_1:30802415-30802434 Msa0018390:intron 45.0%
GTATTTCACCGTAGCTGTTG+TGG + chr1_1:30802525-30802544 Msa0018390:intron 45.0%
TGAGTATCCCACAACAGCTA+CGG - chr1_1:30802536-30802555 None:intergenic 45.0%
TTGGAGGCTACTAATCCTTG+AGG - chr1_1:30802601-30802620 None:intergenic 45.0%
! CAAGATTGCTGTGTGGACTA+CGG + chr1_1:30802618-30802637 Msa0018390:intron 45.0%
!!! CGTGTGTTTTGTTTTGCAGG+TGG + chr1_1:30802730-30802749 Msa0018390:intron 45.0%
TGTTTCCTAAGCATCAAGGG+AGG + chr1_1:30803469-30803488 Msa0018390:CDS 45.0%
CAATCCAAACGACTTGCATC+TGG + chr1_1:30803583-30803602 Msa0018390:intron 45.0%
!! GGTCTTGTATCGTGTGGTTT+TGG + chr1_1:30803925-30803944 Msa0018390:CDS 45.0%
AGCTTGCGGAGTGATTGCAA+CGG + chr1_1:30801978-30801997 Msa0018390:CDS 50.0%
!! GTACTGTGCTTGTTGTGGGT+TGG + chr1_1:30802009-30802028 Msa0018390:CDS 50.0%
CCATAGAGACCAACAGCAAC+AGG - chr1_1:30802096-30802115 None:intergenic 50.0%
! CCTGTTGCTGTTGGTCTCTA+TGG + chr1_1:30802093-30802112 Msa0018390:CDS 50.0%
!! GAGGAGTGTCTGTGCTTCAT+AGG - chr1_1:30802291-30802310 None:intergenic 50.0%
GCACAGACACTCCTCAGATT+AGG + chr1_1:30802296-30802315 Msa0018390:intron 50.0%
TAGCCTCCAAGATTGCTGTG+TGG + chr1_1:30802611-30802630 Msa0018390:intron 50.0%
AGTCCACACAGCAATCTTGG+AGG - chr1_1:30802617-30802636 None:intergenic 50.0%
CGTAGTCCACACAGCAATCT+TGG - chr1_1:30802620-30802639 None:intergenic 50.0%
TCCAGTAGCATTGTCGCTAG+AGG + chr1_1:30803004-30803023 Msa0018390:CDS 50.0%
TCCTCTAGCGACAATGCTAC+TGG - chr1_1:30803008-30803027 None:intergenic 50.0%
TTCTGCCTCCCTTGATGCTT+AGG - chr1_1:30803477-30803496 None:intergenic 50.0%
TGGATCATACTCGGCCATCT+CGG + chr1_1:30803945-30803964 Msa0018390:CDS 50.0%
TTCCGCAATCATCTCCGAGA+TGG - chr1_1:30803962-30803981 None:intergenic 50.0%
AGCTTGCGGAGTGATTGCAA+CGG + chr1_1:30801978-30801997 Msa0018390:CDS 50.0%
!! GTACTGTGCTTGTTGTGGGT+TGG + chr1_1:30802009-30802028 Msa0018390:CDS 50.0%
CCATAGAGACCAACAGCAAC+AGG - chr1_1:30802096-30802115 None:intergenic 50.0%
! CCTGTTGCTGTTGGTCTCTA+TGG + chr1_1:30802093-30802112 Msa0018390:CDS 50.0%
!! GAGGAGTGTCTGTGCTTCAT+AGG - chr1_1:30802291-30802310 None:intergenic 50.0%
GCACAGACACTCCTCAGATT+AGG + chr1_1:30802296-30802315 Msa0018390:intron 50.0%
TAGCCTCCAAGATTGCTGTG+TGG + chr1_1:30802611-30802630 Msa0018390:intron 50.0%
AGTCCACACAGCAATCTTGG+AGG - chr1_1:30802617-30802636 None:intergenic 50.0%
CGTAGTCCACACAGCAATCT+TGG - chr1_1:30802620-30802639 None:intergenic 50.0%
TCCAGTAGCATTGTCGCTAG+AGG + chr1_1:30803004-30803023 Msa0018390:CDS 50.0%
TCCTCTAGCGACAATGCTAC+TGG - chr1_1:30803008-30803027 None:intergenic 50.0%
TTCTGCCTCCCTTGATGCTT+AGG - chr1_1:30803477-30803496 None:intergenic 50.0%
TGGATCATACTCGGCCATCT+CGG + chr1_1:30803945-30803964 Msa0018390:CDS 50.0%
TTCCGCAATCATCTCCGAGA+TGG - chr1_1:30803962-30803981 None:intergenic 50.0%
GTTGCAATCACTCCGCAAGC+TGG - chr1_1:30801979-30801998 None:intergenic 55.0%
!! GTGCTTGTTGTGGGTTGGAG+TGG + chr1_1:30802014-30802033 Msa0018390:CDS 55.0%
!! TCCTCAGATTAGGGGTGTCC+CGG + chr1_1:30802306-30802325 Msa0018390:intron 55.0%
!! GATTAGGGGTGTCCCGGTAT+CGG + chr1_1:30802312-30802331 Msa0018390:intron 55.0%
AGGCAGAATCAAGCGCTCTC+AGG + chr1_1:30803489-30803508 Msa0018390:CDS 55.0%
GGCCATCTCGGAGATGATTG+CGG + chr1_1:30803957-30803976 Msa0018390:CDS 55.0%
GTTGCAATCACTCCGCAAGC+TGG - chr1_1:30801979-30801998 None:intergenic 55.0%
!! GTGCTTGTTGTGGGTTGGAG+TGG + chr1_1:30802014-30802033 Msa0018390:CDS 55.0%
!! TCCTCAGATTAGGGGTGTCC+CGG + chr1_1:30802306-30802325 Msa0018390:intron 55.0%
!! GATTAGGGGTGTCCCGGTAT+CGG + chr1_1:30802312-30802331 Msa0018390:intron 55.0%
AGGCAGAATCAAGCGCTCTC+AGG + chr1_1:30803489-30803508 Msa0018390:CDS 55.0%
GGCCATCTCGGAGATGATTG+CGG + chr1_1:30803957-30803976 Msa0018390:CDS 55.0%
ACCGGGACACCCCTAATCTG+AGG - chr1_1:30802310-30802329 None:intergenic 60.0%
ACCGGGACACCCCTAATCTG+AGG - chr1_1:30802310-30802329 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 30801937 30804358 30801937 ID=Msa0018390;Name=Msa0018390
chr1_1 mRNA 30801937 30804358 30801937 ID=Msa0018390-mRNA-1;Parent=Msa0018390;Name=Msa0018390-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.75|0.6|1|1|1|5|365|207
chr1_1 exon 30801937 30802202 30801937 ID=Msa0018390-mRNA-1:exon:10265;Parent=Msa0018390-mRNA-1
chr1_1 exon 30802980 30803131 30802980 ID=Msa0018390-mRNA-1:exon:10266;Parent=Msa0018390-mRNA-1
chr1_1 exon 30803308 30803351 30803308 ID=Msa0018390-mRNA-1:exon:10267;Parent=Msa0018390-mRNA-1
chr1_1 exon 30803448 30803510 30803448 ID=Msa0018390-mRNA-1:exon:10268;Parent=Msa0018390-mRNA-1
chr1_1 exon 30803895 30804358 30803895 ID=Msa0018390-mRNA-1:exon:10269;Parent=Msa0018390-mRNA-1
chr1_1 CDS 30801937 30802202 30801937 ID=Msa0018390-mRNA-1:cds;Parent=Msa0018390-mRNA-1
chr1_1 CDS 30802980 30803131 30802980 ID=Msa0018390-mRNA-1:cds;Parent=Msa0018390-mRNA-1
chr1_1 CDS 30803308 30803351 30803308 ID=Msa0018390-mRNA-1:cds;Parent=Msa0018390-mRNA-1
chr1_1 CDS 30803448 30803510 30803448 ID=Msa0018390-mRNA-1:cds;Parent=Msa0018390-mRNA-1
chr1_1 CDS 30803895 30803993 30803895 ID=Msa0018390-mRNA-1:cds;Parent=Msa0018390-mRNA-1
chr1_1 three_prime_UTR 30803994 30804358 30803994 ID=Msa0018390-mRNA-1:three_prime_utr;Parent=Msa0018390-mRNA-1
Gene Sequence

>Msa0018390

ATGCTTACATACATCATTGAATCGTTTTCTTCTGTTGTACCAGCTTGCGGAGTGATTGCAACGGTTGTAGTGGTACTGTGCTTGTTGTGGGTTGGAGTGGTAGATGATGTTCCCATGCATACAGAAGGAACAATAACACTGAGGCTTTCAACATTCCCTGTTGCTGTTGGTCTCTATGGTTATTGCTTCGCAGGACATGCTGTGTTCCCGAATCTGTATACAGCTATGGCAAATCGAAATCAATTCCCTAAAGTACTCTTGACTTGCACCACATATGCTTTGAGTCTAACTCCAGTAGCATTGTCGCTAGAGGAATTGATACCACCAAATAATCCCAACTTTCAGTTCTACTCCATCTGCATCAGAACAGCATTAGTGATTTCTACACTGCTTGTTGGTCTTTCAGTTCCCTTTTTCGGTTTGGTAATGTCGTTAATTGGGTCCTTGCTCACAATGTTTGTTTCCCTTATTCTACCATCTGCTTGTTTCCTAAGCATCAAGGGAGGCAGAATCAAGCGCTCTCAGGTACTACTATGTGTTACAGTGGTTATAGTAGGTCTTGTATCGTGTGGTTTTGGATCATACTCGGCCATCTCGGAGATGATTGCGGAAATGTTTGCATGA
Protein sequence

>Msa0018390

MLTYIIESFSSVVPACGVIATVVVVLCLLWVGVVDDVPMHTEGTITLRLSTFPVAVGLYGYCFAGHAVFPNLYTAMANRNQFPKVLLTCTTYALSLTPVALSLEELIPPNNPNFQFYSICIRTALVISTLLVGLSVPFFGLVMSLIGSLLTMFVSLILPSACFLSIKGGRIKRSQVLLCVTVVIVGLVSCGFGSYSAISEMIAEMFA*