Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019530 | KEH19967.1 | 33.333 | 198 | 77 | 2 | 4 | 146 | 10 | 207 | 1.07e-16 | 89.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019530 | Msa0111670 | 0.805285 | 1.437430e-49 | -8.615850e-47 |
| Msa0019530 | Msa0157810 | 0.800977 | 1.118933e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019530 | MtrunA17_Chr8g0365081 | 64.912 | 57 | 20 | 0 | 4 | 60 | 10 | 66 | 4.62e-18 | 79.3 |
| Msa0019530 | MtrunA17_Chr8g0361961 | 62.069 | 58 | 22 | 0 | 4 | 61 | 129 | 186 | 1.37e-15 | 75.9 |
| Msa0019530 | MtrunA17_Chr7g0241461 | 54.717 | 53 | 24 | 0 | 7 | 59 | 246 | 298 | 5.09e-13 | 69.7 |
| Msa0019530 | MtrunA17_Chr3g0096291 | 52.727 | 55 | 26 | 0 | 6 | 60 | 245 | 299 | 1.25e-11 | 64.7 |
| Msa0019530 | MtrunA17_Chr1g0174781 | 53.846 | 52 | 24 | 0 | 9 | 60 | 66 | 117 | 1.53e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 72 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACATGTATAGCTATATTA+TGG | 0.216698 | 1_1:-33926109 | Msa0019530:CDS |
| GTTGGCTTCCAAGGCTGTTC+AGG | 0.255579 | 1_1:+33926068 | Msa0019520:intron |
| AAGAGTCTGAAGAGACAATA+AGG | 0.267225 | 1_1:-33925784 | Msa0019530:CDS |
| AAGGTTTCAAGATTGGTTTC+AGG | 0.274698 | 1_1:+33925009 | Msa0019520:intron |
| AGGCTTCTCACCTAGTAAAT+AGG | 0.283561 | 1_1:+33925394 | Msa0019520:intron |
| CCTCTTCCTGTTGGCTTCCA+AGG | 0.306419 | 1_1:+33926059 | Msa0019520:intron |
| TCTGAAGTAGTTTCCCTTGA+TGG | 0.307427 | 1_1:+33926366 | Msa0019520:intron |
| ACAGGGTCAGTTTGAGGTTT+GGG | 0.316317 | 1_1:+33925458 | Msa0019520:intron |
| ATACTTTATCTTCATGTTAG+TGG | 0.322601 | 1_1:+33925673 | Msa0019520:intron |
| CATGTTAGTGGCCAAGATCT+TGG | 0.332232 | 1_1:+33925685 | Msa0019520:intron |
| TCAAACTGACCCTGTATTAG+AGG | 0.342437 | 1_1:-33925450 | Msa0019530:CDS |
| TTCAGATATAAGTCTTGTAT+AGG | 0.346983 | 1_1:+33926394 | Msa0019520:intron |
| AATATCAAAGGTTTCAAGAT+TGG | 0.351414 | 1_1:+33925002 | Msa0019520:intron |
| ATGAAGATAAAGTATGAATA+TGG | 0.362194 | 1_1:-33925665 | Msa0019530:intron |
| AGAGTCTGAAGAGACAATAA+GGG | 0.371680 | 1_1:-33925783 | Msa0019530:CDS |
| GGCCAGAGAGTTGGTTGTTA+AGG | 0.378974 | 1_1:-33925747 | Msa0019530:CDS |
| TCAGATATAAGTCTTGTATA+GGG | 0.385774 | 1_1:+33926395 | Msa0019520:intron |
| TACAGGGTCAGTTTGAGGTT+TGG | 0.401752 | 1_1:+33925457 | Msa0019520:intron |
| AAGGTGACACAGGAGATAAA+AGG | 0.403695 | 1_1:-33925728 | Msa0019530:CDS |
| GAAGTATCAGAAGCTCCTTC+TGG | 0.404234 | 1_1:-33924892 | Msa0019530:intron |
| CCTCTTCAAACCTATTTACT+AGG | 0.405112 | 1_1:-33925404 | Msa0019530:intron |
| AGCCTCTGATGATAACAATA+TGG | 0.410296 | 1_1:-33924920 | Msa0019530:CDS |
| ATGGAACAATCTAAGAAATC+TGG | 0.414975 | 1_1:-33924683 | Msa0019530:CDS |
| ACATCCTCAACCTCTAATAC+AGG | 0.425341 | 1_1:+33925440 | Msa0019520:intron |
| TGGTAAACTACTTAGACAAA+TGG | 0.426465 | 1_1:-33924702 | Msa0019530:CDS |
| CAAGGCTGTTCAGGATGATC+AGG | 0.445387 | 1_1:+33926077 | Msa0019520:intron |
| CTTTGATAACCTTGAGGAGC+TGG | 0.448307 | 1_1:-33924752 | Msa0019530:CDS |
| GGTCACCTTCCTCTTCCTGT+TGG | 0.448770 | 1_1:+33926050 | Msa0019520:intron |
| AATGAATCAAGTTATACATC+TGG | 0.449175 | 1_1:-33924722 | Msa0019530:CDS |
| TCTAATACAGGGTCAGTTTG+AGG | 0.451226 | 1_1:+33925452 | Msa0019520:intron |
| AGAAGAGAGTTCCAAGATCT+TGG | 0.464162 | 1_1:-33925696 | Msa0019530:CDS |
| GACATGTATAGCTATATTAT+GGG | 0.465711 | 1_1:-33926108 | Msa0019530:CDS |
| ATGAAGAGGGGCAACTAGAA+AGG | 0.468905 | 1_1:+33925041 | Msa0019520:intron |
| CTGATCATCCTGAACAGCCT+TGG | 0.469250 | 1_1:-33926076 | Msa0019530:CDS |
| CACCTTAACAACCAACTCTC+TGG | 0.469552 | 1_1:+33925745 | Msa0019520:intron |
| GAACAGCCTTGGAAGCCAAC+AGG | 0.476276 | 1_1:-33926065 | Msa0019530:CDS |
| TGAAACCCAACTAGAAAACT+TGG | 0.496808 | 1_1:-33924956 | Msa0019530:CDS |
| CCTTGGAAGCCAACAGGAAG+AGG | 0.505999 | 1_1:-33926059 | Msa0019530:CDS |
| ATATCTGAAATCTTCCATCA+AGG | 0.506523 | 1_1:-33926380 | Msa0019530:CDS |
| TGACCCTGTATTAGAGGTTG+AGG | 0.521232 | 1_1:-33925444 | Msa0019530:CDS |
| GAAGATAGTTGAGAAGAAGA+AGG | 0.523583 | 1_1:-33926258 | Msa0019530:intron |
| TTTGTATATACTGAGCTAAG+TGG | 0.524300 | 1_1:+33925512 | Msa0019520:intron |
| GAAGAGCTTGGAACTTGCAC+AGG | 0.529413 | 1_1:-33926314 | Msa0019530:CDS |
| GTAGCTTCTGATGAAGAGCT+TGG | 0.535240 | 1_1:-33926326 | Msa0019530:CDS |
| CAGGTTTAGCAAAATGAAGA+GGG | 0.536422 | 1_1:+33925028 | Msa0019520:intron |
| TATCTGAAATCTTCCATCAA+GGG | 0.544329 | 1_1:-33926379 | Msa0019530:CDS |
| AGGTGACACAGGAGATAAAA+GGG | 0.547291 | 1_1:-33925727 | Msa0019530:CDS |
| TGAGGTTTGGGTGATAGTGA+TGG | 0.548869 | 1_1:+33925470 | Msa0019520:intron |
| TATATACTGAGCTAAGTGGT+TGG | 0.549239 | 1_1:+33925516 | Msa0019520:intron |
| TCTTCTCAACTATCTTCATG+TGG | 0.550671 | 1_1:+33926264 | Msa0019520:intron |
| TTCAGACATGATAATATCAA+AGG | 0.551511 | 1_1:+33924990 | Msa0019520:intron |
| ACAGATTGAGGCCAGAGAGT+TGG | 0.551921 | 1_1:-33925756 | Msa0019530:CDS |
| TGAAGAGGGGCAACTAGAAA+GGG | 0.558778 | 1_1:+33925042 | Msa0019520:intron |
| TCTATCAGACATGGAATCAA+AGG | 0.572025 | 1_1:-33926432 | None:intergenic |
| TTGCTTCCACCAGCTCCTCA+AGG | 0.575541 | 1_1:+33924743 | Msa0019520:intron |
| TGATGATAACAATATGGCCA+TGG | 0.579306 | 1_1:-33924914 | Msa0019530:CDS |
| GGCCATATTGTTATCATCAG+AGG | 0.583747 | 1_1:+33924918 | Msa0019520:intron |
| TGATAACCTTGAGGAGCTGG+TGG | 0.586817 | 1_1:-33924749 | Msa0019530:CDS |
| AGGAGCTTCTGATACTTCCA+TGG | 0.589203 | 1_1:+33924897 | Msa0019520:intron |
| TCAGGTTTAGCAAAATGAAG+AGG | 0.594774 | 1_1:+33925027 | Msa0019520:intron |
| CATCCTCAACCTCTAATACA+GGG | 0.599953 | 1_1:+33925441 | Msa0019520:intron |
| CCTAGTAAATAGGTTTGAAG+AGG | 0.600815 | 1_1:+33925404 | Msa0019520:intron |
| AACTATCTTTGATAACCTTG+AGG | 0.601339 | 1_1:-33924758 | Msa0019530:CDS |
| AATAAGGGGAAAACAGATTG+AGG | 0.607350 | 1_1:-33925768 | Msa0019530:CDS |
| GAGGGGCAACTAGAAAGGGT+TGG | 0.609409 | 1_1:+33925046 | Msa0019520:intron |
| GAGTCTGAAGAGACAATAAG+GGG | 0.614243 | 1_1:-33925782 | Msa0019530:CDS |
| GTTGGTTGTTAAGGTGACAC+AGG | 0.617149 | 1_1:-33925738 | Msa0019530:CDS |
| GGTTGGTTATCTGTAGGTGA+TGG | 0.625186 | 1_1:+33925533 | Msa0019520:intron |
| GGAAGCCAACAGGAAGAGGA+AGG | 0.634283 | 1_1:-33926055 | Msa0019530:intron |
| AGGTTTAGCAAAATGAAGAG+GGG | 0.636551 | 1_1:+33925029 | Msa0019520:intron |
| CTAAGTGGTTGGTTATCTGT+AGG | 0.649418 | 1_1:+33925527 | Msa0019520:intron |
| CTTCAGAAGCTACAACACGT+TGG | 0.658839 | 1_1:-33926350 | Msa0019530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTTCAAAAAAACATAAAG+AGG | - | chr1_1:33925227-33925246 | Msa0019530:intron | 20.0% |
| !! | ATGAAGATAAAGTATGAATA+TGG | - | chr1_1:33925372-33925391 | Msa0019530:intron | 20.0% |
| !! | TACTTCAAAAAAACATAAAG+AGG | - | chr1_1:33925227-33925246 | Msa0019530:intron | 20.0% |
| !! | ATGAAGATAAAGTATGAATA+TGG | - | chr1_1:33925372-33925391 | Msa0019530:intron | 20.0% |
| !! | TCAGATATAAGTCTTGTATA+GGG | + | chr1_1:33924645-33924664 | Msa0019520:intron | 25.0% |
| !! | TTCAGATATAAGTCTTGTAT+AGG | + | chr1_1:33924646-33924665 | Msa0019520:intron | 25.0% |
| ! | AGACATGTATAGCTATATTA+TGG | - | chr1_1:33924928-33924947 | Msa0019530:CDS | 25.0% |
| ! | GACATGTATAGCTATATTAT+GGG | - | chr1_1:33924929-33924948 | Msa0019530:CDS | 25.0% |
| ! | GTTATCTTTATCTTCTTTGT+TGG | + | chr1_1:33925043-33925062 | Msa0019520:intron | 25.0% |
| ! | TACATCTTATGATGTTCAAA+AGG | - | chr1_1:33925069-33925088 | Msa0019530:intron | 25.0% |
| ! | ATACTTTATCTTCATGTTAG+TGG | + | chr1_1:33925367-33925386 | Msa0019520:intron | 25.0% |
| ! | ATAGAACTCTTAAGTCAAAT+TGG | + | chr1_1:33925749-33925768 | Msa0019520:intron | 25.0% |
| !! | TTTGATGTTTGTTAGTGTAT+GGG | + | chr1_1:33925833-33925852 | Msa0019520:intron | 25.0% |
| !!! | TTTTGATGTTTGTTAGTGTA+TGG | + | chr1_1:33925834-33925853 | Msa0019520:intron | 25.0% |
| ! | AATATCAAAGGTTTCAAGAT+TGG | + | chr1_1:33926038-33926057 | Msa0019520:intron | 25.0% |
| ! | TTCAGACATGATAATATCAA+AGG | + | chr1_1:33926050-33926069 | Msa0019520:intron | 25.0% |
| ! | AATGAATCAAGTTATACATC+TGG | - | chr1_1:33926315-33926334 | Msa0019530:CDS | 25.0% |
| !! | TCAGATATAAGTCTTGTATA+GGG | + | chr1_1:33924645-33924664 | Msa0019520:intron | 25.0% |
| !! | TTCAGATATAAGTCTTGTAT+AGG | + | chr1_1:33924646-33924665 | Msa0019520:intron | 25.0% |
| ! | AGACATGTATAGCTATATTA+TGG | - | chr1_1:33924928-33924947 | Msa0019530:CDS | 25.0% |
| ! | GACATGTATAGCTATATTAT+GGG | - | chr1_1:33924929-33924948 | Msa0019530:CDS | 25.0% |
| ! | GTTATCTTTATCTTCTTTGT+TGG | + | chr1_1:33925043-33925062 | Msa0019520:intron | 25.0% |
| ! | TACATCTTATGATGTTCAAA+AGG | - | chr1_1:33925069-33925088 | Msa0019530:intron | 25.0% |
| ! | ATACTTTATCTTCATGTTAG+TGG | + | chr1_1:33925367-33925386 | Msa0019520:intron | 25.0% |
| ! | ATAGAACTCTTAAGTCAAAT+TGG | + | chr1_1:33925749-33925768 | Msa0019520:intron | 25.0% |
| !! | TTTGATGTTTGTTAGTGTAT+GGG | + | chr1_1:33925833-33925852 | Msa0019520:intron | 25.0% |
| !!! | TTTTGATGTTTGTTAGTGTA+TGG | + | chr1_1:33925834-33925853 | Msa0019520:intron | 25.0% |
| ! | AATATCAAAGGTTTCAAGAT+TGG | + | chr1_1:33926038-33926057 | Msa0019520:intron | 25.0% |
| ! | TTCAGACATGATAATATCAA+AGG | + | chr1_1:33926050-33926069 | Msa0019520:intron | 25.0% |
| ! | AATGAATCAAGTTATACATC+TGG | - | chr1_1:33926315-33926334 | Msa0019530:CDS | 25.0% |
| ! | ATATCTGAAATCTTCCATCA+AGG | - | chr1_1:33924657-33924676 | Msa0019530:CDS | 30.0% |
| ! | TATCTGAAATCTTCCATCAA+GGG | - | chr1_1:33924658-33924677 | Msa0019530:CDS | 30.0% |
| ! | CCATAATTTGAGATAAGTTG+AGG | + | chr1_1:33924836-33924855 | Msa0019520:intron | 30.0% |
| CCTCAACTTATCTCAAATTA+TGG | - | chr1_1:33924833-33924852 | Msa0019530:intron | 30.0% | |
| CAACTTATCTCAAATTATGG+AGG | - | chr1_1:33924836-33924855 | Msa0019530:intron | 30.0% | |
| TTTAACCTTAGGATCTTATG+AGG | + | chr1_1:33925011-33925030 | Msa0019520:intron | 30.0% | |
| !! | TTCTTAAGTTGCATTTTCTC+TGG | + | chr1_1:33925187-33925206 | Msa0019520:intron | 30.0% |
| TCAGTAATGATATTTGCTTC+TGG | + | chr1_1:33925417-33925436 | Msa0019520:intron | 30.0% | |
| TTTGTATATACTGAGCTAAG+TGG | + | chr1_1:33925528-33925547 | Msa0019520:intron | 30.0% | |
| TTAAGAGTTCTATCAGAAGT+TGG | - | chr1_1:33925756-33925775 | Msa0019530:CDS | 30.0% | |
| ! | TTGATGTTTGTTAGTGTATG+GGG | + | chr1_1:33925832-33925851 | Msa0019520:intron | 30.0% |
| !! | TGTTTGTTGTTGTTGTTGTT+TGG | + | chr1_1:33925898-33925917 | Msa0019520:intron | 30.0% |
| AGATGTATCAGAGATTGTTT+AGG | + | chr1_1:33925954-33925973 | Msa0019520:intron | 30.0% | |
| GTTGTGAAATAGAAGATGAA+GGG | + | chr1_1:33926198-33926217 | Msa0019520:intron | 30.0% | |
| ! | AACTATCTTTGATAACCTTG+AGG | - | chr1_1:33926279-33926298 | Msa0019530:CDS | 30.0% |
| TGGTAAACTACTTAGACAAA+TGG | - | chr1_1:33926335-33926354 | Msa0019530:CDS | 30.0% | |
| ATGGAACAATCTAAGAAATC+TGG | - | chr1_1:33926354-33926373 | Msa0019530:CDS | 30.0% | |
| ! | ATATCTGAAATCTTCCATCA+AGG | - | chr1_1:33924657-33924676 | Msa0019530:CDS | 30.0% |
| ! | TATCTGAAATCTTCCATCAA+GGG | - | chr1_1:33924658-33924677 | Msa0019530:CDS | 30.0% |
| ! | CCATAATTTGAGATAAGTTG+AGG | + | chr1_1:33924836-33924855 | Msa0019520:intron | 30.0% |
| CCTCAACTTATCTCAAATTA+TGG | - | chr1_1:33924833-33924852 | Msa0019530:intron | 30.0% | |
| CAACTTATCTCAAATTATGG+AGG | - | chr1_1:33924836-33924855 | Msa0019530:intron | 30.0% | |
| TTTAACCTTAGGATCTTATG+AGG | + | chr1_1:33925011-33925030 | Msa0019520:intron | 30.0% | |
| !! | TTCTTAAGTTGCATTTTCTC+TGG | + | chr1_1:33925187-33925206 | Msa0019520:intron | 30.0% |
| TCAGTAATGATATTTGCTTC+TGG | + | chr1_1:33925417-33925436 | Msa0019520:intron | 30.0% | |
| TTTGTATATACTGAGCTAAG+TGG | + | chr1_1:33925528-33925547 | Msa0019520:intron | 30.0% | |
| TTAAGAGTTCTATCAGAAGT+TGG | - | chr1_1:33925756-33925775 | Msa0019530:CDS | 30.0% | |
| ! | TTGATGTTTGTTAGTGTATG+GGG | + | chr1_1:33925832-33925851 | Msa0019520:intron | 30.0% |
| !! | TGTTTGTTGTTGTTGTTGTT+TGG | + | chr1_1:33925898-33925917 | Msa0019520:intron | 30.0% |
| AGATGTATCAGAGATTGTTT+AGG | + | chr1_1:33925954-33925973 | Msa0019520:intron | 30.0% | |
| GTTGTGAAATAGAAGATGAA+GGG | + | chr1_1:33926198-33926217 | Msa0019520:intron | 30.0% | |
| ! | AACTATCTTTGATAACCTTG+AGG | - | chr1_1:33926279-33926298 | Msa0019530:CDS | 30.0% |
| TGGTAAACTACTTAGACAAA+TGG | - | chr1_1:33926335-33926354 | Msa0019530:CDS | 30.0% | |
| ATGGAACAATCTAAGAAATC+TGG | - | chr1_1:33926354-33926373 | Msa0019530:CDS | 30.0% | |
| TCTTCTCAACTATCTTCATG+TGG | + | chr1_1:33924776-33924795 | Msa0019520:intron | 35.0% | |
| GAAGATAGTTGAGAAGAAGA+AGG | - | chr1_1:33924779-33924798 | Msa0019530:CDS | 35.0% | |
| GGTCTTCCTTTGATATTAGT+GGG | + | chr1_1:33924866-33924885 | Msa0019520:intron | 35.0% | |
| ATGAAGTGAGCAAGCATATA+TGG | + | chr1_1:33924891-33924910 | Msa0019520:intron | 35.0% | |
| GGCTTCTAAACTTTAACCTT+AGG | + | chr1_1:33925022-33925041 | Msa0019520:intron | 35.0% | |
| GCTCAATTTCTTGTTCTTGT+AGG | + | chr1_1:33925127-33925146 | Msa0019520:intron | 35.0% | |
| AAGAGTCTGAAGAGACAATA+AGG | - | chr1_1:33925253-33925272 | Msa0019530:intron | 35.0% | |
| AGAGTCTGAAGAGACAATAA+GGG | - | chr1_1:33925254-33925273 | Msa0019530:intron | 35.0% | |
| AATAAGGGGAAAACAGATTG+AGG | - | chr1_1:33925269-33925288 | Msa0019530:intron | 35.0% | |
| CAAGAGAATCTAAGTGTACA+GGG | + | chr1_1:33925476-33925495 | Msa0019520:intron | 35.0% | |
| TCAAGAGAATCTAAGTGTAC+AGG | + | chr1_1:33925477-33925496 | Msa0019520:intron | 35.0% | |
| TATATACTGAGCTAAGTGGT+TGG | + | chr1_1:33925524-33925543 | Msa0019520:intron | 35.0% | |
| CCTAGTAAATAGGTTTGAAG+AGG | + | chr1_1:33925636-33925655 | Msa0019520:intron | 35.0% | |
| CCTCTTCAAACCTATTTACT+AGG | - | chr1_1:33925633-33925652 | Msa0019530:intron | 35.0% | |
| TTGTTCTTCTTATGTAGGGT+TGG | + | chr1_1:33925688-33925707 | Msa0019520:intron | 35.0% | |
| ! | CAGCTTGTTCTTCTTATGTA+GGG | + | chr1_1:33925692-33925711 | Msa0019520:intron | 35.0% |
| ! | TCAGCTTGTTCTTCTTATGT+AGG | + | chr1_1:33925693-33925712 | Msa0019520:intron | 35.0% |
| ATAAGAAGAACAAGCTGAGT+TGG | - | chr1_1:33925695-33925714 | Msa0019530:CDS | 35.0% | |
| !! | ATCAGAGATTGTTTAGGTTG+AGG | + | chr1_1:33925948-33925967 | Msa0019520:intron | 35.0% |
| AGGTTTAGCAAAATGAAGAG+GGG | + | chr1_1:33926011-33926030 | Msa0019520:intron | 35.0% | |
| CAGGTTTAGCAAAATGAAGA+GGG | + | chr1_1:33926012-33926031 | Msa0019520:intron | 35.0% | |
| TCAGGTTTAGCAAAATGAAG+AGG | + | chr1_1:33926013-33926032 | Msa0019520:intron | 35.0% | |
| !! | AAGGTTTCAAGATTGGTTTC+AGG | + | chr1_1:33926031-33926050 | Msa0019520:intron | 35.0% |
| TGAAACCCAACTAGAAAACT+TGG | - | chr1_1:33926081-33926100 | Msa0019530:CDS | 35.0% | |
| !!! | TTGAGCCAAGTTTTCTAGTT+GGG | + | chr1_1:33926089-33926108 | Msa0019520:intron | 35.0% |
| !! | TTTGAGCCAAGTTTTCTAGT+TGG | + | chr1_1:33926090-33926109 | Msa0019520:intron | 35.0% |
| AGCCTCTGATGATAACAATA+TGG | - | chr1_1:33926117-33926136 | Msa0019530:intron | 35.0% | |
| TGATGATAACAATATGGCCA+TGG | - | chr1_1:33926123-33926142 | Msa0019530:intron | 35.0% | |
| ATAACCATGTTACTACCAGA+AGG | + | chr1_1:33926163-33926182 | Msa0019520:intron | 35.0% | |
| GGTTGTGAAATAGAAGATGA+AGG | + | chr1_1:33926199-33926218 | Msa0019520:intron | 35.0% | |
| TAACACTAGATTGGAGGTTA+AGG | + | chr1_1:33926245-33926264 | Msa0019520:intron | 35.0% | |
| !! | AGCTTTTAGTTGAGTTGCAA+TGG | + | chr1_1:33926413-33926432 | Msa0019520:intron | 35.0% |
| TCTTCTCAACTATCTTCATG+TGG | + | chr1_1:33924776-33924795 | Msa0019520:intron | 35.0% | |
| GAAGATAGTTGAGAAGAAGA+AGG | - | chr1_1:33924779-33924798 | Msa0019530:CDS | 35.0% | |
| GGTCTTCCTTTGATATTAGT+GGG | + | chr1_1:33924866-33924885 | Msa0019520:intron | 35.0% | |
| ATGAAGTGAGCAAGCATATA+TGG | + | chr1_1:33924891-33924910 | Msa0019520:intron | 35.0% | |
| GGCTTCTAAACTTTAACCTT+AGG | + | chr1_1:33925022-33925041 | Msa0019520:intron | 35.0% | |
| GCTCAATTTCTTGTTCTTGT+AGG | + | chr1_1:33925127-33925146 | Msa0019520:intron | 35.0% | |
| AAGAGTCTGAAGAGACAATA+AGG | - | chr1_1:33925253-33925272 | Msa0019530:intron | 35.0% | |
| AGAGTCTGAAGAGACAATAA+GGG | - | chr1_1:33925254-33925273 | Msa0019530:intron | 35.0% | |
| AATAAGGGGAAAACAGATTG+AGG | - | chr1_1:33925269-33925288 | Msa0019530:intron | 35.0% | |
| CAAGAGAATCTAAGTGTACA+GGG | + | chr1_1:33925476-33925495 | Msa0019520:intron | 35.0% | |
| TCAAGAGAATCTAAGTGTAC+AGG | + | chr1_1:33925477-33925496 | Msa0019520:intron | 35.0% | |
| TATATACTGAGCTAAGTGGT+TGG | + | chr1_1:33925524-33925543 | Msa0019520:intron | 35.0% | |
| CCTAGTAAATAGGTTTGAAG+AGG | + | chr1_1:33925636-33925655 | Msa0019520:intron | 35.0% | |
| CCTCTTCAAACCTATTTACT+AGG | - | chr1_1:33925633-33925652 | Msa0019530:intron | 35.0% | |
| TTGTTCTTCTTATGTAGGGT+TGG | + | chr1_1:33925688-33925707 | Msa0019520:intron | 35.0% | |
| ! | CAGCTTGTTCTTCTTATGTA+GGG | + | chr1_1:33925692-33925711 | Msa0019520:intron | 35.0% |
| ! | TCAGCTTGTTCTTCTTATGT+AGG | + | chr1_1:33925693-33925712 | Msa0019520:intron | 35.0% |
| ATAAGAAGAACAAGCTGAGT+TGG | - | chr1_1:33925695-33925714 | Msa0019530:CDS | 35.0% | |
| !! | ATCAGAGATTGTTTAGGTTG+AGG | + | chr1_1:33925948-33925967 | Msa0019520:intron | 35.0% |
| AGGTTTAGCAAAATGAAGAG+GGG | + | chr1_1:33926011-33926030 | Msa0019520:intron | 35.0% | |
| CAGGTTTAGCAAAATGAAGA+GGG | + | chr1_1:33926012-33926031 | Msa0019520:intron | 35.0% | |
| TCAGGTTTAGCAAAATGAAG+AGG | + | chr1_1:33926013-33926032 | Msa0019520:intron | 35.0% | |
| !! | AAGGTTTCAAGATTGGTTTC+AGG | + | chr1_1:33926031-33926050 | Msa0019520:intron | 35.0% |
| TGAAACCCAACTAGAAAACT+TGG | - | chr1_1:33926081-33926100 | Msa0019530:CDS | 35.0% | |
| !!! | TTGAGCCAAGTTTTCTAGTT+GGG | + | chr1_1:33926089-33926108 | Msa0019520:intron | 35.0% |
| !! | TTTGAGCCAAGTTTTCTAGT+TGG | + | chr1_1:33926090-33926109 | Msa0019520:intron | 35.0% |
| AGCCTCTGATGATAACAATA+TGG | - | chr1_1:33926117-33926136 | Msa0019530:intron | 35.0% | |
| TGATGATAACAATATGGCCA+TGG | - | chr1_1:33926123-33926142 | Msa0019530:intron | 35.0% | |
| ATAACCATGTTACTACCAGA+AGG | + | chr1_1:33926163-33926182 | Msa0019520:intron | 35.0% | |
| GGTTGTGAAATAGAAGATGA+AGG | + | chr1_1:33926199-33926218 | Msa0019520:intron | 35.0% | |
| TAACACTAGATTGGAGGTTA+AGG | + | chr1_1:33926245-33926264 | Msa0019520:intron | 35.0% | |
| !! | AGCTTTTAGTTGAGTTGCAA+TGG | + | chr1_1:33926413-33926432 | Msa0019520:intron | 35.0% |
| ! | TCTGAAGTAGTTTCCCTTGA+TGG | + | chr1_1:33924674-33924693 | Msa0019520:intron | 40.0% |
| !!! | AGTGATCTCAGTTTTGACTC+TGG | - | chr1_1:33924749-33924768 | Msa0019530:CDS | 40.0% |
| !!! | GTGATCTCAGTTTTGACTCT+GGG | - | chr1_1:33924750-33924769 | Msa0019530:CDS | 40.0% |
| ! | ATAAGTTGAGGCTTGTCTGA+AGG | + | chr1_1:33924824-33924843 | Msa0019520:intron | 40.0% |
| GGACTTCCCACTAATATCAA+AGG | - | chr1_1:33924857-33924876 | Msa0019530:intron | 40.0% | |
| GGGTCTTCCTTTGATATTAG+TGG | + | chr1_1:33924867-33924886 | Msa0019520:intron | 40.0% | |
| AGTGAGCAAGCATATATGGA+GGG | + | chr1_1:33924887-33924906 | Msa0019520:intron | 40.0% | |
| AAGTGAGCAAGCATATATGG+AGG | + | chr1_1:33924888-33924907 | Msa0019520:intron | 40.0% | |
| TCTTGCTGACAGAAGTTGAA+GGG | + | chr1_1:33925162-33925181 | Msa0019520:intron | 40.0% | |
| TTCTTGCTGACAGAAGTTGA+AGG | + | chr1_1:33925163-33925182 | Msa0019520:intron | 40.0% | |
| GAGTCTGAAGAGACAATAAG+GGG | - | chr1_1:33925255-33925274 | Msa0019530:intron | 40.0% | |
| AAGGTGACACAGGAGATAAA+AGG | - | chr1_1:33925309-33925328 | Msa0019530:intron | 40.0% | |
| AGGTGACACAGGAGATAAAA+GGG | - | chr1_1:33925310-33925329 | Msa0019530:intron | 40.0% | |
| AGAAGAGAGTTCCAAGATCT+TGG | - | chr1_1:33925341-33925360 | Msa0019530:intron | 40.0% | |
| AGAATCTAAGTGTACAGGGT+TGG | + | chr1_1:33925472-33925491 | Msa0019520:intron | 40.0% | |
| ! | CTAAGTGGTTGGTTATCTGT+AGG | + | chr1_1:33925513-33925532 | Msa0019520:intron | 40.0% |
| TCTAATACAGGGTCAGTTTG+AGG | + | chr1_1:33925588-33925607 | Msa0019520:intron | 40.0% | |
| TCAAACTGACCCTGTATTAG+AGG | - | chr1_1:33925587-33925606 | Msa0019530:intron | 40.0% | |
| CATCCTCAACCTCTAATACA+GGG | + | chr1_1:33925599-33925618 | Msa0019520:intron | 40.0% | |
| ACATCCTCAACCTCTAATAC+AGG | + | chr1_1:33925600-33925619 | Msa0019520:intron | 40.0% | |
| AGGCTTCTCACCTAGTAAAT+AGG | + | chr1_1:33925646-33925665 | Msa0019520:intron | 40.0% | |
| !! | ATGTAGGGTTGGTAATGCTA+GGG | + | chr1_1:33925677-33925696 | Msa0019520:intron | 40.0% |
| !! | TATGTAGGGTTGGTAATGCT+AGG | + | chr1_1:33925678-33925697 | Msa0019520:intron | 40.0% |
| ATAGGTGGTTGAGAAAAGAG+GGG | + | chr1_1:33925787-33925806 | Msa0019520:intron | 40.0% | |
| CATAGGTGGTTGAGAAAAGA+GGG | + | chr1_1:33925788-33925807 | Msa0019520:intron | 40.0% | |
| ACATAGGTGGTTGAGAAAAG+AGG | + | chr1_1:33925789-33925808 | Msa0019520:intron | 40.0% | |
| !! | ATGTTTGGTTTGGACATAGG+TGG | + | chr1_1:33925802-33925821 | Msa0019520:intron | 40.0% |
| !! | CTGATGTTTGGTTTGGACAT+AGG | + | chr1_1:33925805-33925824 | Msa0019520:intron | 40.0% |
| GGGATTTCTGATGTTTGGTT+TGG | + | chr1_1:33925812-33925831 | Msa0019520:intron | 40.0% | |
| GTATGGGGATTTCTGATGTT+TGG | + | chr1_1:33925817-33925836 | Msa0019520:intron | 40.0% | |
| !! | AACAACCTCTGAGACAACAA+TGG | - | chr1_1:33925853-33925872 | Msa0019530:intron | 40.0% |
| AACTTCCATTGTTGTCTCAG+AGG | + | chr1_1:33925861-33925880 | Msa0019520:intron | 40.0% | |
| ! | TAGGTTGAGGTGTTTGATGA+TGG | + | chr1_1:33925935-33925954 | Msa0019520:intron | 40.0% |
| GGCCATATTGTTATCATCAG+AGG | + | chr1_1:33926122-33926141 | Msa0019520:intron | 40.0% | |
| ACTAGATTGGAGGTTAAGGA+TGG | + | chr1_1:33926241-33926260 | Msa0019520:intron | 40.0% | |
| TGCTTGTAACACTAGATTGG+AGG | + | chr1_1:33926251-33926270 | Msa0019520:intron | 40.0% | |
| CACTGCTTGTAACACTAGAT+TGG | + | chr1_1:33926254-33926273 | Msa0019520:intron | 40.0% | |
| ! | TCTGAAGTAGTTTCCCTTGA+TGG | + | chr1_1:33924674-33924693 | Msa0019520:intron | 40.0% |
| !!! | AGTGATCTCAGTTTTGACTC+TGG | - | chr1_1:33924749-33924768 | Msa0019530:CDS | 40.0% |
| !!! | GTGATCTCAGTTTTGACTCT+GGG | - | chr1_1:33924750-33924769 | Msa0019530:CDS | 40.0% |
| ! | ATAAGTTGAGGCTTGTCTGA+AGG | + | chr1_1:33924824-33924843 | Msa0019520:intron | 40.0% |
| GGACTTCCCACTAATATCAA+AGG | - | chr1_1:33924857-33924876 | Msa0019530:intron | 40.0% | |
| GGGTCTTCCTTTGATATTAG+TGG | + | chr1_1:33924867-33924886 | Msa0019520:intron | 40.0% | |
| AGTGAGCAAGCATATATGGA+GGG | + | chr1_1:33924887-33924906 | Msa0019520:intron | 40.0% | |
| AAGTGAGCAAGCATATATGG+AGG | + | chr1_1:33924888-33924907 | Msa0019520:intron | 40.0% | |
| TCTTGCTGACAGAAGTTGAA+GGG | + | chr1_1:33925162-33925181 | Msa0019520:intron | 40.0% | |
| TTCTTGCTGACAGAAGTTGA+AGG | + | chr1_1:33925163-33925182 | Msa0019520:intron | 40.0% | |
| GAGTCTGAAGAGACAATAAG+GGG | - | chr1_1:33925255-33925274 | Msa0019530:intron | 40.0% | |
| AAGGTGACACAGGAGATAAA+AGG | - | chr1_1:33925309-33925328 | Msa0019530:intron | 40.0% | |
| AGGTGACACAGGAGATAAAA+GGG | - | chr1_1:33925310-33925329 | Msa0019530:intron | 40.0% | |
| AGAAGAGAGTTCCAAGATCT+TGG | - | chr1_1:33925341-33925360 | Msa0019530:intron | 40.0% | |
| AGAATCTAAGTGTACAGGGT+TGG | + | chr1_1:33925472-33925491 | Msa0019520:intron | 40.0% | |
| ! | CTAAGTGGTTGGTTATCTGT+AGG | + | chr1_1:33925513-33925532 | Msa0019520:intron | 40.0% |
| TCTAATACAGGGTCAGTTTG+AGG | + | chr1_1:33925588-33925607 | Msa0019520:intron | 40.0% | |
| TCAAACTGACCCTGTATTAG+AGG | - | chr1_1:33925587-33925606 | Msa0019530:intron | 40.0% | |
| CATCCTCAACCTCTAATACA+GGG | + | chr1_1:33925599-33925618 | Msa0019520:intron | 40.0% | |
| ACATCCTCAACCTCTAATAC+AGG | + | chr1_1:33925600-33925619 | Msa0019520:intron | 40.0% | |
| AGGCTTCTCACCTAGTAAAT+AGG | + | chr1_1:33925646-33925665 | Msa0019520:intron | 40.0% | |
| !! | ATGTAGGGTTGGTAATGCTA+GGG | + | chr1_1:33925677-33925696 | Msa0019520:intron | 40.0% |
| !! | TATGTAGGGTTGGTAATGCT+AGG | + | chr1_1:33925678-33925697 | Msa0019520:intron | 40.0% |
| ATAGGTGGTTGAGAAAAGAG+GGG | + | chr1_1:33925787-33925806 | Msa0019520:intron | 40.0% | |
| CATAGGTGGTTGAGAAAAGA+GGG | + | chr1_1:33925788-33925807 | Msa0019520:intron | 40.0% | |
| ACATAGGTGGTTGAGAAAAG+AGG | + | chr1_1:33925789-33925808 | Msa0019520:intron | 40.0% | |
| !! | ATGTTTGGTTTGGACATAGG+TGG | + | chr1_1:33925802-33925821 | Msa0019520:intron | 40.0% |
| !! | CTGATGTTTGGTTTGGACAT+AGG | + | chr1_1:33925805-33925824 | Msa0019520:intron | 40.0% |
| GGGATTTCTGATGTTTGGTT+TGG | + | chr1_1:33925812-33925831 | Msa0019520:intron | 40.0% | |
| GTATGGGGATTTCTGATGTT+TGG | + | chr1_1:33925817-33925836 | Msa0019520:intron | 40.0% | |
| !! | AACAACCTCTGAGACAACAA+TGG | - | chr1_1:33925853-33925872 | Msa0019530:intron | 40.0% |
| AACTTCCATTGTTGTCTCAG+AGG | + | chr1_1:33925861-33925880 | Msa0019520:intron | 40.0% | |
| ! | TAGGTTGAGGTGTTTGATGA+TGG | + | chr1_1:33925935-33925954 | Msa0019520:intron | 40.0% |
| GGCCATATTGTTATCATCAG+AGG | + | chr1_1:33926122-33926141 | Msa0019520:intron | 40.0% | |
| ACTAGATTGGAGGTTAAGGA+TGG | + | chr1_1:33926241-33926260 | Msa0019520:intron | 40.0% | |
| TGCTTGTAACACTAGATTGG+AGG | + | chr1_1:33926251-33926270 | Msa0019520:intron | 40.0% | |
| CACTGCTTGTAACACTAGAT+TGG | + | chr1_1:33926254-33926273 | Msa0019520:intron | 40.0% | |
| CTTCAGAAGCTACAACACGT+TGG | - | chr1_1:33924687-33924706 | Msa0019530:CDS | 45.0% | |
| GTAGCTTCTGATGAAGAGCT+TGG | - | chr1_1:33924711-33924730 | Msa0019530:CDS | 45.0% | |
| GGTGACCTCATAAGATCCTA+AGG | - | chr1_1:33925003-33925022 | Msa0019530:CDS | 45.0% | |
| CTTGCTGACAGAAGTTGAAG+GGG | + | chr1_1:33925161-33925180 | Msa0019520:intron | 45.0% | |
| CACCTTAACAACCAACTCTC+TGG | + | chr1_1:33925295-33925314 | Msa0019520:intron | 45.0% | |
| GTTGGTTGTTAAGGTGACAC+AGG | - | chr1_1:33925299-33925318 | Msa0019530:intron | 45.0% | |
| CATGTTAGTGGCCAAGATCT+TGG | + | chr1_1:33925355-33925374 | Msa0019520:intron | 45.0% | |
| ATGGTACTTGAGAAGCTGCA+AGG | - | chr1_1:33925391-33925410 | Msa0019530:intron | 45.0% | |
| TCTAAGTGTACAGGGTTGGA+AGG | + | chr1_1:33925468-33925487 | Msa0019520:intron | 45.0% | |
| ! | GGTTGGTTATCTGTAGGTGA+TGG | + | chr1_1:33925507-33925526 | Msa0019520:intron | 45.0% |
| ! | TGAGGTTTGGGTGATAGTGA+TGG | + | chr1_1:33925570-33925589 | Msa0019520:intron | 45.0% |
| ! | ACAGGGTCAGTTTGAGGTTT+GGG | + | chr1_1:33925582-33925601 | Msa0019520:intron | 45.0% |
| ! | TACAGGGTCAGTTTGAGGTT+TGG | + | chr1_1:33925583-33925602 | Msa0019520:intron | 45.0% |
| TGACCCTGTATTAGAGGTTG+AGG | - | chr1_1:33925593-33925612 | Msa0019530:intron | 45.0% | |
| GTAATGCTAGGGATGATCAG+AGG | + | chr1_1:33925666-33925685 | Msa0019520:intron | 45.0% | |
| TAGGTGGTTGAGAAAAGAGG+GGG | + | chr1_1:33925786-33925805 | Msa0019520:intron | 45.0% | |
| TGAAGAGGGGCAACTAGAAA+GGG | + | chr1_1:33925998-33926017 | Msa0019520:intron | 45.0% | |
| ATGAAGAGGGGCAACTAGAA+AGG | + | chr1_1:33925999-33926018 | Msa0019520:intron | 45.0% | |
| AGGAGCTTCTGATACTTCCA+TGG | + | chr1_1:33926143-33926162 | Msa0019520:intron | 45.0% | |
| ! | GAAGTATCAGAAGCTCCTTC+TGG | - | chr1_1:33926145-33926164 | Msa0019530:intron | 45.0% |
| AGCTCCTTCTGGTAGTAACA+TGG | - | chr1_1:33926156-33926175 | Msa0019530:intron | 45.0% | |
| GGAGATGGTTGAATGTTCAG+AGG | + | chr1_1:33926220-33926239 | Msa0019520:intron | 45.0% | |
| TTGGAGGTTAAGGATGGAGA+TGG | + | chr1_1:33926235-33926254 | Msa0019520:intron | 45.0% | |
| ! | CTTTGATAACCTTGAGGAGC+TGG | - | chr1_1:33926285-33926304 | Msa0019530:CDS | 45.0% |
| CTTCAGAAGCTACAACACGT+TGG | - | chr1_1:33924687-33924706 | Msa0019530:CDS | 45.0% | |
| GTAGCTTCTGATGAAGAGCT+TGG | - | chr1_1:33924711-33924730 | Msa0019530:CDS | 45.0% | |
| GGTGACCTCATAAGATCCTA+AGG | - | chr1_1:33925003-33925022 | Msa0019530:CDS | 45.0% | |
| CTTGCTGACAGAAGTTGAAG+GGG | + | chr1_1:33925161-33925180 | Msa0019520:intron | 45.0% | |
| CACCTTAACAACCAACTCTC+TGG | + | chr1_1:33925295-33925314 | Msa0019520:intron | 45.0% | |
| GTTGGTTGTTAAGGTGACAC+AGG | - | chr1_1:33925299-33925318 | Msa0019530:intron | 45.0% | |
| CATGTTAGTGGCCAAGATCT+TGG | + | chr1_1:33925355-33925374 | Msa0019520:intron | 45.0% | |
| ATGGTACTTGAGAAGCTGCA+AGG | - | chr1_1:33925391-33925410 | Msa0019530:intron | 45.0% | |
| TCTAAGTGTACAGGGTTGGA+AGG | + | chr1_1:33925468-33925487 | Msa0019520:intron | 45.0% | |
| ! | GGTTGGTTATCTGTAGGTGA+TGG | + | chr1_1:33925507-33925526 | Msa0019520:intron | 45.0% |
| ! | TGAGGTTTGGGTGATAGTGA+TGG | + | chr1_1:33925570-33925589 | Msa0019520:intron | 45.0% |
| ! | ACAGGGTCAGTTTGAGGTTT+GGG | + | chr1_1:33925582-33925601 | Msa0019520:intron | 45.0% |
| ! | TACAGGGTCAGTTTGAGGTT+TGG | + | chr1_1:33925583-33925602 | Msa0019520:intron | 45.0% |
| TGACCCTGTATTAGAGGTTG+AGG | - | chr1_1:33925593-33925612 | Msa0019530:intron | 45.0% | |
| GTAATGCTAGGGATGATCAG+AGG | + | chr1_1:33925666-33925685 | Msa0019520:intron | 45.0% | |
| TAGGTGGTTGAGAAAAGAGG+GGG | + | chr1_1:33925786-33925805 | Msa0019520:intron | 45.0% | |
| TGAAGAGGGGCAACTAGAAA+GGG | + | chr1_1:33925998-33926017 | Msa0019520:intron | 45.0% | |
| ATGAAGAGGGGCAACTAGAA+AGG | + | chr1_1:33925999-33926018 | Msa0019520:intron | 45.0% | |
| AGGAGCTTCTGATACTTCCA+TGG | + | chr1_1:33926143-33926162 | Msa0019520:intron | 45.0% | |
| ! | GAAGTATCAGAAGCTCCTTC+TGG | - | chr1_1:33926145-33926164 | Msa0019530:intron | 45.0% |
| AGCTCCTTCTGGTAGTAACA+TGG | - | chr1_1:33926156-33926175 | Msa0019530:intron | 45.0% | |
| GGAGATGGTTGAATGTTCAG+AGG | + | chr1_1:33926220-33926239 | Msa0019520:intron | 45.0% | |
| TTGGAGGTTAAGGATGGAGA+TGG | + | chr1_1:33926235-33926254 | Msa0019520:intron | 45.0% | |
| ! | CTTTGATAACCTTGAGGAGC+TGG | - | chr1_1:33926285-33926304 | Msa0019530:CDS | 45.0% |
| GAAGAGCTTGGAACTTGCAC+AGG | - | chr1_1:33924723-33924742 | Msa0019530:CDS | 50.0% | |
| CAAGGCTGTTCAGGATGATC+AGG | + | chr1_1:33924963-33924982 | Msa0019520:intron | 50.0% | |
| CTGATCATCCTGAACAGCCT+TGG | - | chr1_1:33924961-33924980 | Msa0019530:CDS | 50.0% | |
| ACAGATTGAGGCCAGAGAGT+TGG | - | chr1_1:33925281-33925300 | Msa0019530:intron | 50.0% | |
| ! | GGCCAGAGAGTTGGTTGTTA+AGG | - | chr1_1:33925290-33925309 | Msa0019530:intron | 50.0% |
| TGATAACCTTGAGGAGCTGG+TGG | - | chr1_1:33926288-33926307 | Msa0019530:CDS | 50.0% | |
| GAAGAGCTTGGAACTTGCAC+AGG | - | chr1_1:33924723-33924742 | Msa0019530:CDS | 50.0% | |
| CAAGGCTGTTCAGGATGATC+AGG | + | chr1_1:33924963-33924982 | Msa0019520:intron | 50.0% | |
| CTGATCATCCTGAACAGCCT+TGG | - | chr1_1:33924961-33924980 | Msa0019530:CDS | 50.0% | |
| ACAGATTGAGGCCAGAGAGT+TGG | - | chr1_1:33925281-33925300 | Msa0019530:intron | 50.0% | |
| ! | GGCCAGAGAGTTGGTTGTTA+AGG | - | chr1_1:33925290-33925309 | Msa0019530:intron | 50.0% |
| TGATAACCTTGAGGAGCTGG+TGG | - | chr1_1:33926288-33926307 | Msa0019530:CDS | 50.0% | |
| ! | GTTGGCTTCCAAGGCTGTTC+AGG | + | chr1_1:33924972-33924991 | Msa0019520:intron | 55.0% |
| GAACAGCCTTGGAAGCCAAC+AGG | - | chr1_1:33924972-33924991 | Msa0019530:CDS | 55.0% | |
| !! | CCTCTTCCTGTTGGCTTCCA+AGG | + | chr1_1:33924981-33925000 | Msa0019520:intron | 55.0% |
| CCTTGGAAGCCAACAGGAAG+AGG | - | chr1_1:33924978-33924997 | Msa0019530:CDS | 55.0% | |
| GGAAGCCAACAGGAAGAGGA+AGG | - | chr1_1:33924982-33925001 | Msa0019530:CDS | 55.0% | |
| GGTCACCTTCCTCTTCCTGT+TGG | + | chr1_1:33924990-33925009 | Msa0019520:intron | 55.0% | |
| GAGGGGCAACTAGAAAGGGT+TGG | + | chr1_1:33925994-33926013 | Msa0019520:intron | 55.0% | |
| TTGCTTCCACCAGCTCCTCA+AGG | + | chr1_1:33926297-33926316 | Msa0019520:intron | 55.0% | |
| ! | GTTGGCTTCCAAGGCTGTTC+AGG | + | chr1_1:33924972-33924991 | Msa0019520:intron | 55.0% |
| GAACAGCCTTGGAAGCCAAC+AGG | - | chr1_1:33924972-33924991 | Msa0019530:CDS | 55.0% | |
| !! | CCTCTTCCTGTTGGCTTCCA+AGG | + | chr1_1:33924981-33925000 | Msa0019520:intron | 55.0% |
| CCTTGGAAGCCAACAGGAAG+AGG | - | chr1_1:33924978-33924997 | Msa0019530:CDS | 55.0% | |
| GGAAGCCAACAGGAAGAGGA+AGG | - | chr1_1:33924982-33925001 | Msa0019530:CDS | 55.0% | |
| GGTCACCTTCCTCTTCCTGT+TGG | + | chr1_1:33924990-33925009 | Msa0019520:intron | 55.0% | |
| GAGGGGCAACTAGAAAGGGT+TGG | + | chr1_1:33925994-33926013 | Msa0019520:intron | 55.0% | |
| TTGCTTCCACCAGCTCCTCA+AGG | + | chr1_1:33926297-33926316 | Msa0019520:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 33924615 | 33926444 | 33924615 | ID=Msa0019530;Name=Msa0019530 |
| chr1_1 | mRNA | 33924615 | 33926444 | 33924615 | ID=Msa0019530-mRNA-1;Parent=Msa0019530;Name=Msa0019530-mRNA-1;_AED=0.56;_eAED=0.57;_QI=0|0|0|0.66|1|1|6|0|326 |
| chr1_1 | exon | 33926259 | 33926444 | 33926259 | ID=Msa0019530-mRNA-1:exon:10816;Parent=Msa0019530-mRNA-1 |
| chr1_1 | exon | 33926056 | 33926132 | 33926056 | ID=Msa0019530-mRNA-1:exon:10815;Parent=Msa0019530-mRNA-1 |
| chr1_1 | exon | 33925666 | 33925844 | 33925666 | ID=Msa0019530-mRNA-1:exon:10814;Parent=Msa0019530-mRNA-1 |
| chr1_1 | exon | 33925405 | 33925572 | 33925405 | ID=Msa0019530-mRNA-1:exon:10813;Parent=Msa0019530-mRNA-1 |
| chr1_1 | exon | 33924893 | 33925078 | 33924893 | ID=Msa0019530-mRNA-1:exon:10812;Parent=Msa0019530-mRNA-1 |
| chr1_1 | exon | 33924615 | 33924799 | 33924615 | ID=Msa0019530-mRNA-1:exon:10811;Parent=Msa0019530-mRNA-1 |
| chr1_1 | CDS | 33926259 | 33926444 | 33926259 | ID=Msa0019530-mRNA-1:cds;Parent=Msa0019530-mRNA-1 |
| chr1_1 | CDS | 33926056 | 33926132 | 33926056 | ID=Msa0019530-mRNA-1:cds;Parent=Msa0019530-mRNA-1 |
| chr1_1 | CDS | 33925666 | 33925844 | 33925666 | ID=Msa0019530-mRNA-1:cds;Parent=Msa0019530-mRNA-1 |
| chr1_1 | CDS | 33925405 | 33925572 | 33925405 | ID=Msa0019530-mRNA-1:cds;Parent=Msa0019530-mRNA-1 |
| chr1_1 | CDS | 33924893 | 33925078 | 33924893 | ID=Msa0019530-mRNA-1:cds;Parent=Msa0019530-mRNA-1 |
| chr1_1 | CDS | 33924615 | 33924799 | 33924615 | ID=Msa0019530-mRNA-1:cds;Parent=Msa0019530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
