Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021230 | sp|Q8S9J2|SYYC1_ARATH | 81.034 | 348 | 64 | 1 | 38 | 385 | 40 | 385 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021230 | Msa0113920 | 0.837830 | 4.123887e-57 | -8.615850e-47 |
| Msa0021230 | Msa0474570 | 0.818595 | 1.805538e-52 | -8.615850e-47 |
| Msa0021230 | Msa0519150 | 0.811333 | 7.376950e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021230 | MtrunA17_Chr1g0173201 | 98.961 | 385 | 3 | 1 | 1 | 385 | 1 | 384 | 0.0 | 783 |
| Msa0021230 | MtrunA17_Chr1g0146461 | 79.211 | 380 | 71 | 2 | 6 | 385 | 1 | 372 | 0.0 | 637 |
| Msa0021230 | MtrunA17_Chr1g0146461 | 66.667 | 108 | 30 | 1 | 7 | 114 | 380 | 481 | 4.93e-38 | 142 |
| Msa0021230 | MtrunA17_Chr1g0146441 | 85.401 | 137 | 20 | 0 | 249 | 385 | 1 | 137 | 1.11e-82 | 248 |
| Msa0021230 | MtrunA17_Chr1g0146451 | 60.714 | 84 | 33 | 0 | 130 | 213 | 1 | 84 | 6.44e-30 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021230 | AT2G33840.1 | 81.034 | 348 | 64 | 1 | 38 | 385 | 40 | 385 | 0.0 | 607 |
| Msa0021230 | AT1G28350.1 | 69.973 | 373 | 110 | 1 | 13 | 385 | 1 | 371 | 0.0 | 561 |
| Msa0021230 | AT1G28350.1 | 70.449 | 379 | 107 | 3 | 7 | 385 | 375 | 748 | 0.0 | 545 |
| Msa0021230 | AT1G28350.2 | 69.973 | 373 | 110 | 1 | 13 | 385 | 1 | 371 | 0.0 | 561 |
| Msa0021230 | AT1G28350.2 | 70.449 | 379 | 107 | 3 | 7 | 385 | 375 | 748 | 0.0 | 545 |
| Msa0021230 | AT1G28350.3 | 70.449 | 379 | 107 | 3 | 7 | 385 | 309 | 682 | 0.0 | 545 |
| Msa0021230 | AT1G28350.3 | 74.267 | 307 | 77 | 1 | 79 | 385 | 1 | 305 | 6.40e-170 | 491 |
Find 101 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTGGTTTGCAGGCTTAC+AGG | 0.188149 | 1_1:-37560596 | Msa0021230:intron |
| TGCTAAGCTTAATAACAAAA+TGG | 0.199810 | 1_1:-37563426 | Msa0021230:CDS |
| TTACAGGTGTAGCCAAATTA+TGG | 0.234560 | 1_1:-37563126 | Msa0021230:intron |
| AATTATGTGGCATGCATCTT+TGG | 0.250134 | 1_1:-37560425 | Msa0021230:three_prime_UTR |
| CTCTTCATCCTCCATGTAAA+TGG | 0.251052 | 1_1:+37562117 | None:intergenic |
| GCCGCTACTTGATCGAAATT+TGG | 0.252289 | 1_1:-37563373 | Msa0021230:CDS |
| GTTCACTCCGTCCCATAATT+TGG | 0.255447 | 1_1:+37563114 | None:intergenic |
| AATTACTGCGGTGCTGGATT+TGG | 0.273627 | 1_1:+37567132 | None:intergenic |
| ACTTCGACAAAGCCGGTTTA+AGG | 0.288565 | 1_1:+37561405 | None:intergenic |
| GGGTTTCCTTCCACAATCTT+TGG | 0.305525 | 1_1:+37561731 | None:intergenic |
| ATTATGTGGCATGCATCTTT+GGG | 0.307047 | 1_1:-37560424 | Msa0021230:three_prime_UTR |
| TGCGGTGCTGGATTTGGATT+TGG | 0.330970 | 1_1:+37567138 | None:intergenic |
| CGGAAACTTAAGGGTATGTT+TGG | 0.344854 | 1_1:-37560299 | Msa0021230:three_prime_UTR |
| ACAACCTTAAAAGAATTATC+AGG | 0.345241 | 1_1:-37563235 | Msa0021230:intron |
| TTGGGGTTTGTTGAACCCTT+TGG | 0.351067 | 1_1:-37560406 | Msa0021230:three_prime_UTR |
| TCCATGTAAATGGATGATAA+AGG | 0.366918 | 1_1:+37562127 | None:intergenic |
| ATGTTCTGATTATAGACTTC+AGG | 0.371076 | 1_1:-37560562 | Msa0021230:three_prime_UTR |
| CCCTTTATCATCCATTTACA+TGG | 0.371480 | 1_1:-37562128 | Msa0021230:CDS |
| CTGGTTGCCTAGTCAAAATA+TGG | 0.374269 | 1_1:-37563463 | Msa0021230:CDS |
| AGTATTGTGATGTTATTAAG+AGG | 0.375155 | 1_1:-37562308 | Msa0021230:CDS |
| TCAAAATATGGATTGCTGAT+TGG | 0.384798 | 1_1:-37563451 | Msa0021230:CDS |
| TTGAAGAAAATTGAGATTGT+TGG | 0.389262 | 1_1:-37563395 | Msa0021230:CDS |
| TACAGGTGTAGCCAAATTAT+GGG | 0.395127 | 1_1:-37563125 | Msa0021230:intron |
| TAATAAAGTACGGAAACTTA+AGG | 0.421505 | 1_1:-37560309 | Msa0021230:three_prime_UTR |
| GCTAAGCTTAATAACAAAAT+GGG | 0.426202 | 1_1:-37563425 | Msa0021230:CDS |
| TTCTCTGATCCATTCCCAAT+TGG | 0.433325 | 1_1:+37562352 | None:intergenic |
| ATAGGCCGACATCTGCCAAT+TGG | 0.434224 | 1_1:-37562367 | Msa0021230:intron |
| CTTTGGTTTGCAGGCTTACA+GGG | 0.434499 | 1_1:-37560595 | Msa0021230:intron |
| AGCCGCCGCCGCAGTAGCAC+TGG | 0.438411 | 1_1:-37567196 | Msa0021230:CDS |
| CCATGTAAATGGATGATAAA+GGG | 0.439796 | 1_1:+37562128 | None:intergenic |
| AATAAAGTACGGAAACTTAA+GGG | 0.440315 | 1_1:-37560308 | Msa0021230:three_prime_UTR |
| TCGAAATTTGGAAAGCCGTT+GGG | 0.440768 | 1_1:-37563361 | Msa0021230:CDS |
| TTGGAAATATGCAGCCTGTA+AGG | 0.446216 | 1_1:-37560763 | Msa0021230:intron |
| GAAAGCCGTTGGGATGGATC+TGG | 0.454876 | 1_1:-37563351 | Msa0021230:CDS |
| TTAAATATCTTATCTTACCT+TGG | 0.454939 | 1_1:-37561694 | Msa0021230:CDS |
| TAGGCCGACATCTGCCAATT+GGG | 0.459139 | 1_1:-37562366 | Msa0021230:CDS |
| TGTATGAGTTTCAAATTATG+TGG | 0.460529 | 1_1:-37560438 | Msa0021230:three_prime_UTR |
| ATCGAAATTTGGAAAGCCGT+TGG | 0.468318 | 1_1:-37563362 | Msa0021230:CDS |
| ACATCCAGCTGACCTTAAAC+CGG | 0.474408 | 1_1:-37561417 | Msa0021230:CDS |
| TGGACGAATGCACATTGCTC+AGG | 0.484195 | 1_1:-37566905 | Msa0021230:intron |
| TCTTGCCCTTGTTGTAGACC+AGG | 0.488474 | 1_1:+37562169 | None:intergenic |
| TTTCCTTCCACAATCTTTGG+CGG | 0.490487 | 1_1:+37561734 | None:intergenic |
| TCAAAACCATCGTAACAAAC+AGG | 0.493209 | 1_1:+37566934 | None:intergenic |
| TTCAATGACTTCGACAAAGC+CGG | 0.497005 | 1_1:+37561398 | None:intergenic |
| TGAGTATTGGCCTCTTGTGT+TGG | 0.497158 | 1_1:-37563273 | Msa0021230:CDS |
| GTGGAGCGTAATGCAGATAA+TGG | 0.504803 | 1_1:-37561656 | Msa0021230:CDS |
| TGCTGGATTTGGATTTGGAT+TGG | 0.505166 | 1_1:+37567143 | None:intergenic |
| TTCCTTCCACAATCTTTGGC+GGG | 0.512138 | 1_1:+37561735 | None:intergenic |
| ATTGAAATTCCGACCGACGC+TGG | 0.513517 | 1_1:-37567270 | Msa0021230:five_prime_UTR |
| TGTGGAAGGAAACCCATGCT+TGG | 0.518682 | 1_1:-37561723 | Msa0021230:CDS |
| ATGCCAGAGCTGATGAGTAT+TGG | 0.524296 | 1_1:-37563286 | Msa0021230:CDS |
| TATTTAATGTACTCCAAGCA+TGG | 0.526777 | 1_1:+37561710 | None:intergenic |
| ATCAAAGCAATAATAAAGTA+CGG | 0.527801 | 1_1:-37560319 | Msa0021230:three_prime_UTR |
| AATAACATCACAATACTCTC+TGG | 0.528355 | 1_1:+37562314 | None:intergenic |
| TAAGGGTATGTTTGGATCGG+TGG | 0.528781 | 1_1:-37560291 | None:intergenic |
| ATGTCAGCACACTGCATGCA+TGG | 0.529807 | 1_1:+37563059 | None:intergenic |
| ATTTAATGTACTCCAAGCAT+GGG | 0.531281 | 1_1:+37561711 | None:intergenic |
| TTCCAGTGCTACTGCGGCGG+CGG | 0.533461 | 1_1:+37567194 | None:intergenic |
| CCTCAGCCTGTTTGTTACGA+TGG | 0.535553 | 1_1:-37566940 | Msa0021230:CDS |
| CGACATCTGCCAATTGGGAA+TGG | 0.537270 | 1_1:-37562361 | Msa0021230:CDS |
| TTTGAGATCGTGAGAAGCAT+CGG | 0.543232 | 1_1:-37567012 | Msa0021230:CDS |
| AAAGCCGGTTTAAGGTCAGC+TGG | 0.544325 | 1_1:+37561413 | None:intergenic |
| TCTATAATCAGAACATTACT+TGG | 0.551386 | 1_1:+37560569 | None:intergenic |
| AGGCCAATACTCATCAGCTC+TGG | 0.554004 | 1_1:+37563283 | None:intergenic |
| CATTTACATGGAGGATGAAG+AGG | 0.563565 | 1_1:-37562116 | Msa0021230:intron |
| TAACTCTCCGCTTTCATAGT+CGG | 0.564786 | 1_1:+37561439 | None:intergenic |
| AATTTGGAAAGCCGTTGGGA+TGG | 0.569257 | 1_1:-37563357 | Msa0021230:CDS |
| TCCAAATTTCGATCAAGTAG+CGG | 0.571639 | 1_1:+37563372 | None:intergenic |
| TTACGGTGTGATAAGATGAC+GGG | 0.572281 | 1_1:+37562276 | None:intergenic |
| CGTGCATAGGTTGTTGAGTG+CGG | 0.576234 | 1_1:-37567043 | Msa0021230:intron |
| CATTCCCAATTGGCAGATGT+CGG | 0.585557 | 1_1:+37562362 | None:intergenic |
| TACTATCGCAATGCCAGCGT+CGG | 0.586492 | 1_1:+37567257 | None:intergenic |
| ACTTAAGGGTATGTTTGGAT+CGG | 0.590172 | 1_1:-37560294 | Msa0021230:three_prime_UTR |
| ATCGCAATGCCAGCGTCGGT+CGG | 0.590400 | 1_1:+37567261 | None:intergenic |
| ATGTTACCTGGTCTACAACA+AGG | 0.591222 | 1_1:-37562175 | Msa0021230:CDS |
| AAGCTTAATAACAAAATGGG+TGG | 0.593404 | 1_1:-37563422 | Msa0021230:CDS |
| TGCCCGCCAAAGATTGTGGA+AGG | 0.597557 | 1_1:-37561737 | Msa0021230:CDS |
| CCATCGTAACAAACAGGCTG+AGG | 0.597768 | 1_1:+37566940 | None:intergenic |
| ATATTGCCCGCCAAAGATTG+TGG | 0.598009 | 1_1:-37561741 | Msa0021230:CDS |
| GTGAACAAGCTAACATCCGC+TGG | 0.599305 | 1_1:-37563482 | Msa0021230:CDS |
| GTCATTGAATAAAATTCTAG+AGG | 0.600216 | 1_1:-37561384 | Msa0021230:intron |
| TCCTTCCAGATCCATCCCAA+CGG | 0.609022 | 1_1:+37563346 | None:intergenic |
| TTATGTGGCATGCATCTTTG+GGG | 0.617178 | 1_1:-37560423 | Msa0021230:three_prime_UTR |
| CAATGATTCCAGTGCTACTG+CGG | 0.621909 | 1_1:+37567188 | None:intergenic |
| ATATTCGTACAGATGCCAAA+GGG | 0.621998 | 1_1:+37560391 | None:intergenic |
| ATTACGGTGTGATAAGATGA+CGG | 0.622032 | 1_1:+37562275 | None:intergenic |
| GCAATGTGCATTCGTCCAGA+AGG | 0.623405 | 1_1:+37566910 | None:intergenic |
| TGGATAGAATATTTGAGCAG+CGG | 0.624441 | 1_1:+37563079 | None:intergenic |
| GTTGGGATGGATCTGGAAGG+AGG | 0.625900 | 1_1:-37563344 | Msa0021230:CDS |
| TTGATTGCCGACTATGAAAG+CGG | 0.628637 | 1_1:-37561446 | Msa0021230:CDS |
| TGTTACCTGGTCTACAACAA+GGG | 0.634319 | 1_1:-37562174 | Msa0021230:CDS |
| TGAGCTATATCCAACACAAG+AGG | 0.641928 | 1_1:+37563263 | None:intergenic |
| TTTATCATCCATTTACATGG+AGG | 0.642941 | 1_1:-37562125 | Msa0021230:CDS |
| TTGGTTTAACGAGTTTACTG+TGG | 0.643574 | 1_1:-37561675 | Msa0021230:CDS |
| TGATTCCAGTGCTACTGCGG+CGG | 0.646365 | 1_1:+37567191 | None:intergenic |
| AATATTCGTACAGATGCCAA+AGG | 0.656323 | 1_1:+37560390 | None:intergenic |
| GGTAGATGATGATTCAGCGA+CGG | 0.660169 | 1_1:+37567164 | None:intergenic |
| GCCGTTGGGATGGATCTGGA+AGG | 0.662319 | 1_1:-37563347 | Msa0021230:CDS |
| GGTGTAGCCAAATTATGGGA+CGG | 0.675643 | 1_1:-37563121 | Msa0021230:CDS |
| ACAGTAAACTCGTTAAACCA+AGG | 0.685168 | 1_1:+37561677 | None:intergenic |
| GAGCGTAATGCAGATAATGG+TGG | 0.730139 | 1_1:-37561653 | Msa0021230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAACAAAAAAATACA+AGG | + | chr1_1:37561128-37561147 | None:intergenic | 10.0% |
| !!! | TTTAAGTTTATTGATTTTAA+TGG | - | chr1_1:37562995-37563014 | Msa0021230:intron | 10.0% |
| !!! | CAAAAAAAAAAAACTTTTTT+TGG | + | chr1_1:37563135-37563154 | None:intergenic | 10.0% |
| !!! | CAAAAAAAGTTTTTTTTTTT+TGG | - | chr1_1:37563133-37563152 | Msa0021230:intron | 10.0% |
| !!! | TTTTTTTTTTATGTATATCT+AGG | - | chr1_1:37564041-37564060 | Msa0021230:intron | 10.0% |
| !!! | TTTTTTTTTATGTATATCTA+GGG | - | chr1_1:37564042-37564061 | Msa0021230:intron | 10.0% |
| !! | AAATAAAAATTAATATCATC+TGG | + | chr1_1:37565067-37565086 | None:intergenic | 10.0% |
| !!! | GAATATTTTTATCTTAAAAT+AGG | - | chr1_1:37565181-37565200 | Msa0021230:intron | 10.0% |
| !! | AATTTAAAAATTTAATGTGA+TGG | - | chr1_1:37566347-37566366 | Msa0021230:intron | 10.0% |
| !!! | TTGGAAATTTTATTATAATA+AGG | + | chr1_1:37566565-37566584 | None:intergenic | 10.0% |
| !! | AAATAATGAAAATTGAAAAC+AGG | + | chr1_1:37560493-37560512 | None:intergenic | 15.0% |
| !! | ATTACTATGTTATTACTTAA+TGG | + | chr1_1:37560948-37560967 | None:intergenic | 15.0% |
| !!! | AATTTTTGTTCTGTTTTAAT+TGG | - | chr1_1:37561217-37561236 | Msa0021230:intron | 15.0% |
| !! | TAAAATAAACTATTCTACAT+TGG | - | chr1_1:37561257-37561276 | Msa0021230:intron | 15.0% |
| !!! | TACATTTTCAAAAGAATAAA+AGG | + | chr1_1:37561450-37561469 | None:intergenic | 15.0% |
| !!! | TAGAACAATTATTTTGAATA+GGG | + | chr1_1:37562409-37562428 | None:intergenic | 15.0% |
| !!! | TTAGAACAATTATTTTGAAT+AGG | + | chr1_1:37562410-37562429 | None:intergenic | 15.0% |
| !!! | CATTGTTTTAATTATAACTT+TGG | + | chr1_1:37562712-37562731 | None:intergenic | 15.0% |
| !!! | TATTTTAAAAACCAACATTT+TGG | - | chr1_1:37562809-37562828 | Msa0021230:intron | 15.0% |
| !!! | ATTTTCCGAATTTAAATTTA+TGG | - | chr1_1:37563049-37563068 | Msa0021230:CDS | 15.0% |
| !! | TTCATCCATAAATTTAAATT+CGG | + | chr1_1:37563057-37563076 | None:intergenic | 15.0% |
| !!! | TTTTAATTTTTTAGGAGTTT+TGG | + | chr1_1:37563287-37563306 | None:intergenic | 15.0% |
| !!! | TATTTTAAAAACCAACATTT+TGG | + | chr1_1:37562809-37562828 | None:intergenic | 15.0% |
| !!! | AAAATGTTGGTTTTTAAAAT+AGG | - | chr1_1:37563316-37563335 | Msa0021230:CDS | 15.0% |
| !!! | AAATGTTGGTTTTTAAAATA+GGG | - | chr1_1:37563317-37563336 | Msa0021230:CDS | 15.0% |
| !! | ATTTAAATAGATATTGAAGA+AGG | + | chr1_1:37563516-37563535 | None:intergenic | 15.0% |
| !!! | ATTTTTAATTTAGTTGTTGA+AGG | - | chr1_1:37563986-37564005 | Msa0021230:intron | 15.0% |
| !!! | CATTTTCATATCATAATAAA+AGG | + | chr1_1:37564359-37564378 | None:intergenic | 15.0% |
| !! | TAAATTTGTCATTACTAAAA+AGG | - | chr1_1:37565493-37565512 | Msa0021230:intron | 15.0% |
| !!! | GATTTCTTTTAAAAATTAAG+AGG | + | chr1_1:37566247-37566266 | None:intergenic | 15.0% |
| !!! | TGTAACATTTTCTTATAAAT+AGG | + | chr1_1:37566601-37566620 | None:intergenic | 15.0% |
| !!! | AAAGAAATTTGATAGCAAAT+GGG | + | chr1_1:37561054-37561073 | None:intergenic | 20.0% |
| !!! | TTATTGTTTTGTTTTAGTTC+CGG | + | chr1_1:37561309-37561328 | None:intergenic | 20.0% |
| !! | ACAAAAAGCAAAATATTACA+AGG | - | chr1_1:37561369-37561388 | Msa0021230:intron | 20.0% |
| !!! | TTATTCTTTTGAAAATGTAG+AGG | - | chr1_1:37561451-37561470 | Msa0021230:CDS | 20.0% |
| !!! | TCTTATCATACAATTAGTTT+AGG | + | chr1_1:37561935-37561954 | None:intergenic | 20.0% |
| !! | AAATGCATGAATTATTGTTA+TGG | + | chr1_1:37562753-37562772 | None:intergenic | 20.0% |
| !!! | ATGTTGGTTTTTAAAATAGA+GGG | + | chr1_1:37562807-37562826 | None:intergenic | 20.0% |
| !!! | AATGTTGGTTTTTAAAATAG+AGG | + | chr1_1:37563318-37563337 | None:intergenic | 20.0% |
| !!! | TTGATTTTTGAAGATGTTTT+AGG | - | chr1_1:37562948-37562967 | Msa0021230:intron | 20.0% |
| !!! | GATTAATGGAATACTTTTTT+TGG | - | chr1_1:37563107-37563126 | Msa0021230:CDS | 20.0% |
| !! | AACTCCTAAAAAATTAAAAC+TGG | - | chr1_1:37563288-37563307 | Msa0021230:CDS | 20.0% |
| !! | ACTCCTAAAAAATTAAAACT+GGG | - | chr1_1:37563289-37563308 | Msa0021230:CDS | 20.0% |
| !!! | AATGTTGGTTTTTAAAATAG+GGG | - | chr1_1:37563318-37563337 | Msa0021230:CDS | 20.0% |
| !! | CTTTATCTTATAATTGAAAC+CGG | - | chr1_1:37563451-37563470 | Msa0021230:CDS | 20.0% |
| !! | TTTAAATTAACATAGTGCAT+TGG | - | chr1_1:37563529-37563548 | Msa0021230:intron | 20.0% |
| !! | TTTGATTGTGTAAAAACATA+CGG | + | chr1_1:37563597-37563616 | None:intergenic | 20.0% |
| !! | AGAAATAAATAAATCGCTAT+GGG | + | chr1_1:37563726-37563745 | None:intergenic | 20.0% |
| !! | AAGAAATAAATAAATCGCTA+TGG | + | chr1_1:37563727-37563746 | None:intergenic | 20.0% |
| !! | AAAGAATCAAAATTAGATGT+AGG | - | chr1_1:37563820-37563839 | Msa0021230:intron | 20.0% |
| !! | ACTATCAAAGAAATAAATGA+AGG | - | chr1_1:37564687-37564706 | Msa0021230:intron | 20.0% |
| !! | CTATCAAAGAAATAAATGAA+GGG | - | chr1_1:37564688-37564707 | Msa0021230:intron | 20.0% |
| !! | TTCATTTATGGAAAAAACTT+AGG | + | chr1_1:37564868-37564887 | None:intergenic | 20.0% |
| !!! | TTTTTCCATAAATGAATACA+TGG | - | chr1_1:37564872-37564891 | Msa0021230:intron | 20.0% |
| !! | AAAAACCATGTATTCATTTA+TGG | + | chr1_1:37564880-37564899 | None:intergenic | 20.0% |
| !! | AAAACAAAACATAACTAGAT+AGG | + | chr1_1:37565533-37565552 | None:intergenic | 20.0% |
| !!! | CAGAAAAATATTTTGAATGA+AGG | - | chr1_1:37565620-37565639 | Msa0021230:intron | 20.0% |
| !!! | ATTTTGAATGAAGGAATAAA+AGG | - | chr1_1:37565629-37565648 | Msa0021230:intron | 20.0% |
| !!! | TTTTATTTTCACATTCACTT+CGG | + | chr1_1:37565800-37565819 | None:intergenic | 20.0% |
| !! | AGTGAATGTGAAAATAAAAA+AGG | - | chr1_1:37565801-37565820 | Msa0021230:intron | 20.0% |
| !! | TTAAATATCTTATCTTACCT+TGG | - | chr1_1:37565872-37565891 | Msa0021230:intron | 20.0% |
| !! | GAAACTACTACTATTATAAA+TGG | + | chr1_1:37565982-37566001 | None:intergenic | 20.0% |
| !!! | TTCTTTTAAAAATTAAGAGG+AGG | + | chr1_1:37566244-37566263 | None:intergenic | 20.0% |
| !!! | AATAGGATCAACAAATTTTT+TGG | + | chr1_1:37566584-37566603 | None:intergenic | 20.0% |
| !!! | AGAAAATGTTACAACTTTTA+CGG | - | chr1_1:37566608-37566627 | Msa0021230:intron | 20.0% |
| !! | TAGTATTATCAGAAAAATAG+TGG | - | chr1_1:37566633-37566652 | Msa0021230:intron | 20.0% |
| !! | AGTATTATCAGAAAAATAGT+GGG | - | chr1_1:37566634-37566653 | Msa0021230:intron | 20.0% |
| !! | ACATTTAGTAAACAAAGTAA+AGG | + | chr1_1:37566776-37566795 | None:intergenic | 20.0% |
| !!! | TTTACTAAATGTTTGTTTCT+TGG | - | chr1_1:37566784-37566803 | Msa0021230:intron | 20.0% |
| !!! | TATTTTACTAATTCTAAACG+AGG | + | chr1_1:37566885-37566904 | None:intergenic | 20.0% |
| !! | ATCAAAGCAATAATAAAGTA+CGG | - | chr1_1:37567247-37567266 | Msa0021230:five_prime_UTR | 20.0% |
| ! | TATGAAAATAAGCTGAAAAC+AGG | + | chr1_1:37560702-37560721 | None:intergenic | 25.0% |
| !!! | AATAAGTTGATTATCCAATC+AGG | - | chr1_1:37560787-37560806 | Msa0021230:intron | 25.0% |
| !!! | ATACATTTGTTTTCCACTAT+GGG | + | chr1_1:37560813-37560832 | None:intergenic | 25.0% |
| !!! | TATACATTTGTTTTCCACTA+TGG | + | chr1_1:37560814-37560833 | None:intergenic | 25.0% |
| !! | ACTTAATGGTAATGAACAAT+TGG | + | chr1_1:37560934-37560953 | None:intergenic | 25.0% |
| !! | CAAAGAAATTTGATAGCAAA+TGG | + | chr1_1:37561055-37561074 | None:intergenic | 25.0% |
| !!! | CATTTGCTATCAAATTTCTT+TGG | - | chr1_1:37561053-37561072 | Msa0021230:intron | 25.0% |
| ! | TCAAAAATGATATGCTTGAA+GGG | + | chr1_1:37561163-37561182 | None:intergenic | 25.0% |
| !!! | AGCATATCATTTTTGAGTTT+TGG | - | chr1_1:37561167-37561186 | Msa0021230:intron | 25.0% |
| !!! | TTAATTGGTCCTTATTTTGA+CGG | - | chr1_1:37561232-37561251 | Msa0021230:intron | 25.0% |
| !!! | TATTTTAGTCCGTCAAAATA+AGG | + | chr1_1:37561244-37561263 | None:intergenic | 25.0% |
| !! | CCAATATGAATAAATTTTGC+CGG | - | chr1_1:37561287-37561306 | Msa0021230:intron | 25.0% |
| ! | CAAGGACAAAAAACAAAAAA+TGG | - | chr1_1:37561387-37561406 | Msa0021230:CDS | 25.0% |
| !! | AGAGATTTGTTCTTTGAAAA+AGG | - | chr1_1:37561479-37561498 | Msa0021230:intron | 25.0% |
| ! | CTTAATAATTATAGCAACCT+AGG | + | chr1_1:37561779-37561798 | None:intergenic | 25.0% |
| ! | TGATAAGAATAGTAATTCAG+AGG | - | chr1_1:37561947-37561966 | Msa0021230:intron | 25.0% |
| !!! | ACAATTATTTTGAATAGGGA+TGG | + | chr1_1:37562405-37562424 | None:intergenic | 25.0% |
| ! | ATATATCAAGACTAATTCAG+AGG | + | chr1_1:37562581-37562600 | None:intergenic | 25.0% |
| !!! | AGTCTTATTAAATTGAGTGA+TGG | - | chr1_1:37562608-37562627 | Msa0021230:intron | 25.0% |
| ! | GTTGGATAATTCTTATTGTA+GGG | + | chr1_1:37562672-37562691 | None:intergenic | 25.0% |
| ! | AGTTGGATAATTCTTATTGT+AGG | + | chr1_1:37562673-37562692 | None:intergenic | 25.0% |
| ! | AAGAATTATCCAACTAATTG+TGG | - | chr1_1:37562678-37562697 | Msa0021230:intron | 25.0% |
| !!! | TGTTGGTTTTTAAAATAGAG+GGG | + | chr1_1:37562806-37562825 | None:intergenic | 25.0% |
| ! | GTAAAAAAACTTGTCCATTT+AGG | - | chr1_1:37563197-37563216 | Msa0021230:intron | 25.0% |
| ! | CTCCTAAAAAATTAAAACTG+GGG | - | chr1_1:37563290-37563309 | Msa0021230:CDS | 25.0% |
| !!! | ATGTTGGTTTTTAAAATAGG+GGG | - | chr1_1:37563319-37563338 | Msa0021230:CDS | 25.0% |
| !! | AACTCCCTTTTTATGAAAAA+AGG | - | chr1_1:37563347-37563366 | Msa0021230:CDS | 25.0% |
| !! | ACTCCCTTTTTATGAAAAAA+GGG | - | chr1_1:37563348-37563367 | Msa0021230:CDS | 25.0% |
| !!! | TTTAAGCCAATTCACTTTTT+AGG | - | chr1_1:37563384-37563403 | Msa0021230:CDS | 25.0% |
| ! | GAAGAAGGATAAAGAAAAAA+CGG | + | chr1_1:37563501-37563520 | None:intergenic | 25.0% |
| !! | ATACTACGGAATCATTTTAA+GGG | + | chr1_1:37563621-37563640 | None:intergenic | 25.0% |
| !! | AATACTACGGAATCATTTTA+AGG | + | chr1_1:37563622-37563641 | None:intergenic | 25.0% |
| ! | ATCTTATGGTAGTAATACTA+CGG | + | chr1_1:37563635-37563654 | None:intergenic | 25.0% |
| ! | AAATAAATAAATCGCTATGG+GGG | + | chr1_1:37563724-37563743 | None:intergenic | 25.0% |
| ! | GAAATAAATAAATCGCTATG+GGG | + | chr1_1:37563725-37563744 | None:intergenic | 25.0% |
| !!! | TGGATAATTTTTTCGATCTA+CGG | - | chr1_1:37563868-37563887 | Msa0021230:intron | 25.0% |
| ! | TGCTAAGCTTAATAACAAAA+TGG | - | chr1_1:37564140-37564159 | Msa0021230:intron | 25.0% |
| ! | GCTAAGCTTAATAACAAAAT+GGG | - | chr1_1:37564141-37564160 | Msa0021230:intron | 25.0% |
| ! | TTGAAGAAAATTGAGATTGT+TGG | - | chr1_1:37564171-37564190 | Msa0021230:intron | 25.0% |
| ! | ACAACCTTAAAAGAATTATC+AGG | - | chr1_1:37564331-37564350 | Msa0021230:intron | 25.0% |
| ! | AAAGCAAGCATCAATATATA+GGG | + | chr1_1:37564562-37564581 | None:intergenic | 25.0% |
| ! | TATAGAATGATGTCCTTATT+AGG | - | chr1_1:37564639-37564658 | Msa0021230:intron | 25.0% |
| ! | AACTAAAAATACACCTTTGT+TGG | - | chr1_1:37564754-37564773 | Msa0021230:intron | 25.0% |
| !! | AACAAACTTTGAGAAAATGA+TGG | - | chr1_1:37564781-37564800 | Msa0021230:intron | 25.0% |
| ! | AAACTATAAGAAACTAAGAC+GGG | + | chr1_1:37565025-37565044 | None:intergenic | 25.0% |
| ! | GAAACTATAAGAAACTAAGA+CGG | + | chr1_1:37565026-37565045 | None:intergenic | 25.0% |
| ! | AGTATTGTGATGTTATTAAG+AGG | - | chr1_1:37565258-37565277 | Msa0021230:intron | 25.0% |
| ! | TGTGATTTGATATAAGATTG+TGG | - | chr1_1:37565653-37565672 | Msa0021230:intron | 25.0% |
| ! | AATGAAAATCTTTACCAGAA+AGG | + | chr1_1:37565688-37565707 | None:intergenic | 25.0% |
| ! | GTCATTGAATAAAATTCTAG+AGG | - | chr1_1:37566182-37566201 | Msa0021230:intron | 25.0% |
| !! | CAGAATTGTCTTATTAGTAT+TGG | - | chr1_1:37566304-37566323 | Msa0021230:intron | 25.0% |
| !! | TCTCTGATTTTACAATTCTT+TGG | - | chr1_1:37566431-37566450 | Msa0021230:intron | 25.0% |
| ! | TTATTATAATAAGGACCAGA+GGG | + | chr1_1:37566556-37566575 | None:intergenic | 25.0% |
| ! | TTTATTATAATAAGGACCAG+AGG | + | chr1_1:37566557-37566576 | None:intergenic | 25.0% |
| !!! | TTAGAAAAGCAATTTTCAAG+TGG | - | chr1_1:37566743-37566762 | Msa0021230:intron | 25.0% |
| ! | TCTATAATCAGAACATTACT+TGG | + | chr1_1:37567000-37567019 | None:intergenic | 25.0% |
| ! | TGTATGAGTTTCAAATTATG+TGG | - | chr1_1:37567128-37567147 | Msa0021230:intron | 25.0% |
| ! | TAATAAAGTACGGAAACTTA+AGG | - | chr1_1:37567257-37567276 | Msa0021230:five_prime_UTR | 25.0% |
| ! | AATAAAGTACGGAAACTTAA+GGG | - | chr1_1:37567258-37567277 | Msa0021230:five_prime_UTR | 25.0% |
| GAAAGTCAAAACCCTAAAAA+TGG | - | chr1_1:37560334-37560353 | Msa0021230:three_prime_UTR | 30.0% | |
| GAGAGAAGAAAAAATTACTG+CGG | + | chr1_1:37560449-37560468 | None:intergenic | 30.0% | |
| TTTGATGAATTTACGTGCAT+AGG | - | chr1_1:37560510-37560529 | Msa0021230:three_prime_UTR | 30.0% | |
| ATCAACTTATTTGCAGCTTA+CGG | + | chr1_1:37560778-37560797 | None:intergenic | 30.0% | |
| TAAATTTGCATATATGCCCA+AGG | - | chr1_1:37560904-37560923 | Msa0021230:intron | 30.0% | |
| ATGAACAATTGGAAAACCTT+GGG | + | chr1_1:37560923-37560942 | None:intergenic | 30.0% | |
| AATGAACAATTGGAAAACCT+TGG | + | chr1_1:37560924-37560943 | None:intergenic | 30.0% | |
| CAAAAAATGGTAAACTTGCA+GGG | + | chr1_1:37561097-37561116 | None:intergenic | 30.0% | |
| CAAGGACTTAAACCAAAAAA+TGG | + | chr1_1:37561110-37561129 | None:intergenic | 30.0% | |
| CTCAAAAATGATATGCTTGA+AGG | + | chr1_1:37561164-37561183 | None:intergenic | 30.0% | |
| !!! | CATTTTTGAGTTTTGGTCTT+AGG | - | chr1_1:37561174-37561193 | Msa0021230:intron | 30.0% |
| CCGGCAAAATTTATTCATAT+TGG | + | chr1_1:37561290-37561309 | None:intergenic | 30.0% | |
| ! | TCTAGTACTTCTCAGTTTTA+GGG | - | chr1_1:37561561-37561580 | Msa0021230:intron | 30.0% |
| AGTTACATCTATATGTGCTT+TGG | - | chr1_1:37561668-37561687 | Msa0021230:CDS | 30.0% | |
| TGAACAGTAGATCAAATAGA+AGG | - | chr1_1:37561703-37561722 | Msa0021230:CDS | 30.0% | |
| TAAGCAAGATAAAACTCACA+GGG | + | chr1_1:37561863-37561882 | None:intergenic | 30.0% | |
| TTAAGCAAGATAAAACTCAC+AGG | + | chr1_1:37561864-37561883 | None:intergenic | 30.0% | |
| GACTTCTTCCATTAAAAGAA+TGG | + | chr1_1:37561913-37561932 | None:intergenic | 30.0% | |
| GCTAGAAGAATACTCTTAAA+TGG | - | chr1_1:37562083-37562102 | Msa0021230:intron | 30.0% | |
| ATGATGAATAGTCGATCAAA+TGG | + | chr1_1:37562225-37562244 | None:intergenic | 30.0% | |
| !! | ATCACATGTTCGAGTTTTAT+TGG | - | chr1_1:37562338-37562357 | Msa0021230:CDS | 30.0% |
| ! | AATTGTTCTAAACCTTGCAA+TGG | - | chr1_1:37562419-37562438 | Msa0021230:intron | 30.0% |
| TTCTTATTGTAGGGTAAATG+TGG | + | chr1_1:37562663-37562682 | None:intergenic | 30.0% | |
| TATTGTTATGGTGAAGAGTA+GGG | + | chr1_1:37562741-37562760 | None:intergenic | 30.0% | |
| TTATTGTTATGGTGAAGAGT+AGG | + | chr1_1:37562742-37562761 | None:intergenic | 30.0% | |
| !!! | GTTGGTTTTTAAAATAGAGG+GGG | + | chr1_1:37562805-37562824 | None:intergenic | 30.0% |
| ! | ACCAAATTGACTCCAAATTT+GGG | + | chr1_1:37562854-37562873 | None:intergenic | 30.0% |
| ! | AACCAAATTGACTCCAAATT+TGG | + | chr1_1:37562855-37562874 | None:intergenic | 30.0% |
| AATCTTCATCTCTTCATCAA+TGG | + | chr1_1:37563091-37563110 | None:intergenic | 30.0% | |
| GATGAAGAGATGAAGATTAA+TGG | - | chr1_1:37563093-37563112 | Msa0021230:CDS | 30.0% | |
| !!! | GTCCCCAGTTTTAATTTTTT+AGG | + | chr1_1:37563295-37563314 | None:intergenic | 30.0% |
| ! | CTCCCTTTTTATGAAAAAAG+GGG | - | chr1_1:37563349-37563368 | Msa0021230:CDS | 30.0% |
| !!! | GTCCCCTTTTTTCATAAAAA+GGG | + | chr1_1:37563354-37563373 | None:intergenic | 30.0% |
| !! | AATTGGCTTAAATGCACTTT+TGG | + | chr1_1:37563376-37563395 | None:intergenic | 30.0% |
| TCAGAACCTAAAAAGTGAAT+TGG | + | chr1_1:37563393-37563412 | None:intergenic | 30.0% | |
| CTTTATGTATGATACTACTC+CGG | + | chr1_1:37563473-37563492 | None:intergenic | 30.0% | |
| AAGGATAAAGAAAAAACGGT+TGG | + | chr1_1:37563497-37563516 | None:intergenic | 30.0% | |
| ACTACCATAAGATTCAATAC+TGG | - | chr1_1:37563642-37563661 | Msa0021230:intron | 30.0% | |
| ! | AGATCCAGTATTGAATCTTA+TGG | + | chr1_1:37563649-37563668 | None:intergenic | 30.0% |
| GATGTAGGAAAAATTGTTCA+AGG | - | chr1_1:37563835-37563854 | Msa0021230:intron | 30.0% | |
| ! | TCTACGGCAATAACTATTTT+TGG | - | chr1_1:37563884-37563903 | Msa0021230:intron | 30.0% |
| CATTTAGTTAAACTGAGGAT+TGG | - | chr1_1:37563910-37563929 | Msa0021230:intron | 30.0% | |
| ! | TCAAAATATGGATTGCTGAT+TGG | - | chr1_1:37564115-37564134 | Msa0021230:intron | 30.0% |
| AAGCTTAATAACAAAATGGG+TGG | - | chr1_1:37564144-37564163 | Msa0021230:intron | 30.0% | |
| ! | GGAACCTGATAATTCTTTTA+AGG | + | chr1_1:37564338-37564357 | None:intergenic | 30.0% |
| TCATATGATCCACTGAATAA+TGG | - | chr1_1:37564382-37564401 | Msa0021230:intron | 30.0% | |
| CAAAGCAAGCATCAATATAT+AGG | + | chr1_1:37564563-37564582 | None:intergenic | 30.0% | |
| ATAAATGAAGGGCAAAACTT+AGG | - | chr1_1:37564699-37564718 | Msa0021230:intron | 30.0% | |
| AAACTTAGGTGCAATTCTTT+AGG | - | chr1_1:37564713-37564732 | Msa0021230:intron | 30.0% | |
| ! | AAGTTTGTTCTATCCAACAA+AGG | + | chr1_1:37564770-37564789 | None:intergenic | 30.0% |
| !! | TGATGGATTTGATGAAATCA+TGG | - | chr1_1:37564798-37564817 | Msa0021230:intron | 30.0% |
| TGCAATGTTAGTTGTGAAAA+TGG | - | chr1_1:37564899-37564918 | Msa0021230:intron | 30.0% | |
| ! | AATTTCAAGTGTTCTGTTCT+TGG | - | chr1_1:37564994-37565013 | Msa0021230:intron | 30.0% |
| AATAACATCACAATACTCTC+TGG | + | chr1_1:37565255-37565274 | None:intergenic | 30.0% | |
| CCATGTAAATGGATGATAAA+GGG | + | chr1_1:37565441-37565460 | None:intergenic | 30.0% | |
| TCCATGTAAATGGATGATAA+AGG | + | chr1_1:37565442-37565461 | None:intergenic | 30.0% | |
| TTTATCATCCATTTACATGG+AGG | - | chr1_1:37565441-37565460 | Msa0021230:intron | 30.0% | |
| GACTGTTCAATCTTTGTATT+TGG | - | chr1_1:37565764-37565783 | Msa0021230:intron | 30.0% | |
| TCTTTGTATTTGGATATCAC+AGG | - | chr1_1:37565774-37565793 | Msa0021230:intron | 30.0% | |
| ATTTAATGTACTCCAAGCAT+GGG | + | chr1_1:37565858-37565877 | None:intergenic | 30.0% | |
| TATTTAATGTACTCCAAGCA+TGG | + | chr1_1:37565859-37565878 | None:intergenic | 30.0% | |
| GTTCAAAATGAGGAAATAGA+AGG | + | chr1_1:37565951-37565970 | None:intergenic | 30.0% | |
| GATTCTTGTATTCAATCGTT+TGG | - | chr1_1:37566043-37566062 | Msa0021230:intron | 30.0% | |
| AAAGATGCATAAACATAACC+AGG | + | chr1_1:37566216-37566235 | None:intergenic | 30.0% | |
| ATCTCTACTATCTATGTACT+AGG | - | chr1_1:37566264-37566283 | Msa0021230:intron | 30.0% | |
| TATTATAATAAGGACCAGAG+GGG | + | chr1_1:37566555-37566574 | None:intergenic | 30.0% | |
| ! | TATCAGAAAAATAGTGGGAA+TGG | - | chr1_1:37566639-37566658 | Msa0021230:intron | 30.0% |
| GACTAAACTGAAATTGTCTT+TGG | - | chr1_1:37566954-37566973 | Msa0021230:CDS | 30.0% | |
| ATGTTCTGATTATAGACTTC+AGG | - | chr1_1:37567004-37567023 | Msa0021230:CDS | 30.0% | |
| ! | TTTTCACTTGTGAAATACAG+TGG | - | chr1_1:37567082-37567101 | Msa0021230:intron | 30.0% |
| !!! | CGTGTAGTTTTTTTTTGTTG+CGG | - | chr1_1:37567199-37567218 | Msa0021230:CDS | 30.0% |
| !!! | TGCTTCTTCTGCCATTTTTA+GGG | + | chr1_1:37560348-37560367 | None:intergenic | 35.0% |
| TCAAAACCATCGTAACAAAC+AGG | + | chr1_1:37560635-37560654 | None:intergenic | 35.0% | |
| TAAGCTGAAAACAGGTAATG+AGG | + | chr1_1:37560694-37560713 | None:intergenic | 35.0% | |
| ACACTTGTATTGAGTAGTGT+AGG | + | chr1_1:37560858-37560877 | None:intergenic | 35.0% | |
| ! | CTCAACATGTTAGACTTTTC+TGG | + | chr1_1:37560971-37560990 | None:intergenic | 35.0% |
| CAGAAAAGTCTAACATGTTG+AGG | - | chr1_1:37560969-37560988 | Msa0021230:intron | 35.0% | |
| CCAAAAAATGGTAAACTTGC+AGG | + | chr1_1:37561098-37561117 | None:intergenic | 35.0% | |
| !!! | CCTGCAAGTTTACCATTTTT+TGG | - | chr1_1:37561095-37561114 | Msa0021230:intron | 35.0% |
| ! | GACATACAACGTTTTGCTTT+TGG | + | chr1_1:37561335-37561354 | None:intergenic | 35.0% |
| ! | GTCTAGTACTTCTCAGTTTT+AGG | - | chr1_1:37561560-37561579 | Msa0021230:intron | 35.0% |
| !! | AGATCAAATAGAAGGTGTTC+TGG | - | chr1_1:37561711-37561730 | Msa0021230:CDS | 35.0% |
| TAATCCTCAAACATTTGCCT+AGG | - | chr1_1:37561759-37561778 | Msa0021230:CDS | 35.0% | |
| ! | GTGATCTGCCATTCTTTTAA+TGG | - | chr1_1:37561902-37561921 | Msa0021230:intron | 35.0% |
| GAATAATTCAGAGCTCTTAG+AGG | + | chr1_1:37561978-37561997 | None:intergenic | 35.0% | |
| CCAAATATCCTTCTAACAAG+GGG | + | chr1_1:37562008-37562027 | None:intergenic | 35.0% | |
| GCCAAATATCCTTCTAACAA+GGG | + | chr1_1:37562009-37562028 | None:intergenic | 35.0% | |
| AGCCAAATATCCTTCTAACA+AGG | + | chr1_1:37562010-37562029 | None:intergenic | 35.0% | |
| TAAAACTCGAACATGTGATG+TGG | + | chr1_1:37562337-37562356 | None:intergenic | 35.0% | |
| AATTCATGCATTTGTCCCTT+CGG | - | chr1_1:37562760-37562779 | Msa0021230:intron | 35.0% | |
| ! | AAAGTGCATTTAAGACCGAA+GGG | + | chr1_1:37562778-37562797 | None:intergenic | 35.0% |
| ! | AAAAGTGCATTTAAGACCGA+AGG | + | chr1_1:37562779-37562798 | None:intergenic | 35.0% |
| ! | TTCGGTCTTAAATGCACTTT+TGG | - | chr1_1:37562778-37562797 | Msa0021230:intron | 35.0% |
| ! | AATTGACTCCAAATTTGGGT+GGG | + | chr1_1:37562850-37562869 | None:intergenic | 35.0% |
| ! | AAATTGACTCCAAATTTGGG+TGG | + | chr1_1:37562851-37562870 | None:intergenic | 35.0% |
| ! | ACCCAAATTTGGAGTCAATT+TGG | - | chr1_1:37562850-37562869 | Msa0021230:intron | 35.0% |
| ! | TTAGGGGTATGTTTACAAGT+TGG | - | chr1_1:37562920-37562939 | Msa0021230:intron | 35.0% |
| ! | TAGGGGTATGTTTACAAGTT+GGG | - | chr1_1:37562921-37562940 | Msa0021230:intron | 35.0% |
| ! | AACCAAATTGACTCCACATT+GGG | - | chr1_1:37563253-37563272 | Msa0021230:CDS | 35.0% |
| !!! | GGTCCCCTTTTTTCATAAAA+AGG | + | chr1_1:37563355-37563374 | None:intergenic | 35.0% |
| CGGAGTAGTATCATACATAA+AGG | - | chr1_1:37563471-37563490 | Msa0021230:CDS | 35.0% | |
| TTGTTCAAGGTGAGATTCTA+TGG | - | chr1_1:37563848-37563867 | Msa0021230:intron | 35.0% | |
| GGTGACATTTAGTTAAACTG+AGG | - | chr1_1:37563905-37563924 | Msa0021230:intron | 35.0% | |
| !!! | CAGCAATCCATATTTTGACT+AGG | + | chr1_1:37564113-37564132 | None:intergenic | 35.0% |
| TCCAAATTTCGATCAAGTAG+CGG | + | chr1_1:37564197-37564216 | None:intergenic | 35.0% | |
| ! | GAGGAAAAGTTGAGTTTTTG+TGG | - | chr1_1:37564241-37564260 | Msa0021230:intron | 35.0% |
| ATTCCAGATCCATTATTCAG+TGG | + | chr1_1:37564394-37564413 | None:intergenic | 35.0% | |
| !! | CTGGAATGTTGTTTCATGTT+TGG | - | chr1_1:37564407-37564426 | Msa0021230:intron | 35.0% |
| !!! | GTTTGGCTTTTCCAATTTAC+AGG | - | chr1_1:37564424-37564443 | Msa0021230:intron | 35.0% |
| ATTTGGCTACACCTGTAAAT+TGG | + | chr1_1:37564438-37564457 | None:intergenic | 35.0% | |
| TTACAGGTGTAGCCAAATTA+TGG | - | chr1_1:37564440-37564459 | Msa0021230:intron | 35.0% | |
| TACAGGTGTAGCCAAATTAT+GGG | - | chr1_1:37564441-37564460 | Msa0021230:intron | 35.0% | |
| TGGATAGAATATTTGAGCAG+CGG | + | chr1_1:37564490-37564509 | None:intergenic | 35.0% | |
| !!! | TGCTGACATTTTTTTCCTCA+AGG | - | chr1_1:37564521-37564540 | Msa0021230:intron | 35.0% |
| AACCATACGAAAAGCAACTT+AGG | - | chr1_1:37564835-37564854 | Msa0021230:intron | 35.0% | |
| !!! | TTCCTAAGTTGCTTTTCGTA+TGG | + | chr1_1:37564840-37564859 | None:intergenic | 35.0% |
| CATACAGTTAACACATCCAA+AGG | + | chr1_1:37564954-37564973 | None:intergenic | 35.0% | |
| !! | TTGTGCTGTTTATTATGTCC+TGG | - | chr1_1:37565109-37565128 | Msa0021230:intron | 35.0% |
| ATTACGGTGTGATAAGATGA+CGG | + | chr1_1:37565294-37565313 | None:intergenic | 35.0% | |
| GAAAGGAAATCTGGAGATTA+CGG | + | chr1_1:37565310-37565329 | None:intergenic | 35.0% | |
| TCCTTTCAGCTAGTGTATAT+TGG | - | chr1_1:37565323-37565342 | Msa0021230:intron | 35.0% | |
| TCCAATATACACTAGCTGAA+AGG | + | chr1_1:37565327-37565346 | None:intergenic | 35.0% | |
| GTCACTTACTAATTGATCCT+CGG | - | chr1_1:37565355-37565374 | Msa0021230:intron | 35.0% | |
| TCACTTACTAATTGATCCTC+GGG | - | chr1_1:37565356-37565375 | Msa0021230:intron | 35.0% | |
| ! | TGATTTTCAGACATGTTACC+TGG | - | chr1_1:37565379-37565398 | Msa0021230:intron | 35.0% |
| CCCTTTATCATCCATTTACA+TGG | - | chr1_1:37565438-37565457 | Msa0021230:intron | 35.0% | |
| TGTGGCTATTTATTCCTTTC+TGG | - | chr1_1:37565671-37565690 | Msa0021230:intron | 35.0% | |
| ACAGTAAACTCGTTAAACCA+AGG | + | chr1_1:37565892-37565911 | None:intergenic | 35.0% | |
| TTGGTTTAACGAGTTTACTG+TGG | - | chr1_1:37565891-37565910 | Msa0021230:intron | 35.0% | |
| GGAACATGAAGTTCAAAATG+AGG | + | chr1_1:37565961-37565980 | None:intergenic | 35.0% | |
| AGTAGTTTCCTAAACCATTC+TGG | - | chr1_1:37565993-37566012 | Msa0021230:intron | 35.0% | |
| TTCATGCTTTCATTCTACGT+AGG | - | chr1_1:37566076-37566095 | Msa0021230:intron | 35.0% | |
| ! | ATTCTAGAGGTAATGTTTCC+TGG | - | chr1_1:37566195-37566214 | Msa0021230:intron | 35.0% |
| GTTAACTGAAAGACGACTAA+GGG | - | chr1_1:37566453-37566472 | Msa0021230:intron | 35.0% | |
| ! | TAGAGATTTTCATGGAAGGT+GGG | - | chr1_1:37566498-37566517 | Msa0021230:intron | 35.0% |
| !! | TTTTAATTGAATACCCCCTC+TGG | - | chr1_1:37566538-37566557 | Msa0021230:intron | 35.0% |
| ATTATAATAAGGACCAGAGG+GGG | + | chr1_1:37566554-37566573 | None:intergenic | 35.0% | |
| !!! | AAGCAATTTTCAAGTGGCAT+TGG | - | chr1_1:37566749-37566768 | Msa0021230:intron | 35.0% |
| !!! | TTTTTGAAGTGTTGCCTTAC+AGG | + | chr1_1:37566820-37566839 | None:intergenic | 35.0% |
| AGAGCTACTAAAAAGAGTCA+AGG | - | chr1_1:37566855-37566874 | Msa0021230:intron | 35.0% | |
| !! | TGAAATTGTCTTTGGTTTGC+AGG | - | chr1_1:37566962-37566981 | Msa0021230:CDS | 35.0% |
| AATTATGTGGCATGCATCTT+TGG | - | chr1_1:37567141-37567160 | Msa0021230:CDS | 35.0% | |
| ATTATGTGGCATGCATCTTT+GGG | - | chr1_1:37567142-37567161 | Msa0021230:CDS | 35.0% | |
| ATATTCGTACAGATGCCAAA+GGG | + | chr1_1:37567178-37567197 | None:intergenic | 35.0% | |
| AATATTCGTACAGATGCCAA+AGG | + | chr1_1:37567179-37567198 | None:intergenic | 35.0% | |
| ! | ACTTAAGGGTATGTTTGGAT+CGG | - | chr1_1:37567272-37567291 | Msa0021230:five_prime_UTR | 35.0% |
| !!! | CTGCTTCTTCTGCCATTTTT+AGG | + | chr1_1:37560349-37560368 | None:intergenic | 40.0% |
| TGCTGGATTTGGATTTGGAT+TGG | + | chr1_1:37560426-37560445 | None:intergenic | 40.0% | |
| AGAAAAAATTACTGCGGTGC+TGG | + | chr1_1:37560443-37560462 | None:intergenic | 40.0% | |
| ! | TTTGAGATCGTGAGAAGCAT+CGG | - | chr1_1:37560554-37560573 | Msa0021230:three_prime_UTR | 40.0% |
| !!! | TACGATGGTTTTGAACCTTC+TGG | - | chr1_1:37560641-37560660 | Msa0021230:intron | 40.0% |
| CAAAACGTTGTATGTCTGCA+GGG | - | chr1_1:37561339-37561358 | Msa0021230:intron | 40.0% | |
| TGATGTTATGCCACATACTG+TGG | + | chr1_1:37561530-37561549 | None:intergenic | 40.0% | |
| ATCACTTTGACACAGAATGG+TGG | + | chr1_1:37561887-37561906 | None:intergenic | 40.0% | |
| CAGATCACTTTGACACAGAA+TGG | + | chr1_1:37561890-37561909 | None:intergenic | 40.0% | |
| CCCCTTGTTAGAAGGATATT+TGG | - | chr1_1:37562005-37562024 | Msa0021230:intron | 40.0% | |
| TGGGTTGTAACTGATCTCAT+AGG | + | chr1_1:37562174-37562193 | None:intergenic | 40.0% | |
| AGTTACAACCCAAACACTAG+CGG | - | chr1_1:37562182-37562201 | Msa0021230:intron | 40.0% | |
| TAGTCGATCAAATGGAAGAG+TGG | + | chr1_1:37562217-37562236 | None:intergenic | 40.0% | |
| CAAAACTGGGACCAAAATGT+TGG | + | chr1_1:37562823-37562842 | None:intergenic | 40.0% | |
| !! | CAACATTTTGGTCCCAGTTT+TGG | - | chr1_1:37562821-37562840 | Msa0021230:intron | 40.0% |
| ! | ATTGACTCCAAATTTGGGTG+GGG | + | chr1_1:37562849-37562868 | None:intergenic | 40.0% |
| ! | TGGAGTCAATTTGGTTGATG+TGG | - | chr1_1:37562859-37562878 | Msa0021230:intron | 40.0% |
| AGACATTGCCACGTCATAAA+TGG | + | chr1_1:37562896-37562915 | None:intergenic | 40.0% | |
| ACGTGGCAATGTCTGAATTT+AGG | - | chr1_1:37562902-37562921 | Msa0021230:intron | 40.0% | |
| CGTGGCAATGTCTGAATTTA+GGG | - | chr1_1:37562903-37562922 | Msa0021230:intron | 40.0% | |
| GTGGCAATGTCTGAATTTAG+GGG | - | chr1_1:37562904-37562923 | Msa0021230:intron | 40.0% | |
| ! | AGGGGTATGTTTACAAGTTG+GGG | - | chr1_1:37562922-37562941 | Msa0021230:intron | 40.0% |
| ATGACATGGCAACACCTAAA+TGG | + | chr1_1:37563214-37563233 | None:intergenic | 40.0% | |
| ! | TGGAGTCAATTTGGTTGATG+TGG | + | chr1_1:37562859-37562878 | None:intergenic | 40.0% |
| ! | CAACCAAATTGACTCCACAT+TGG | - | chr1_1:37563252-37563271 | Msa0021230:CDS | 40.0% |
| ! | ACCAAATTGACTCCACATTG+GGG | - | chr1_1:37563254-37563273 | Msa0021230:CDS | 40.0% |
| AAAACTGGGGACCAAAATGT+TGG | - | chr1_1:37563303-37563322 | Msa0021230:CDS | 40.0% | |
| !! | TTTCAGGCTTTCAGGTTTCT+GGG | + | chr1_1:37563750-37563769 | None:intergenic | 40.0% |
| !! | TGTCAAGTATGGCTTGTTTC+AGG | + | chr1_1:37563766-37563785 | None:intergenic | 40.0% |
| CACACATCTGATGTCAAGTA+TGG | + | chr1_1:37563777-37563796 | None:intergenic | 40.0% | |
| !! | AGTTGTTGAAGGTGTTGTAC+TGG | - | chr1_1:37563997-37564016 | Msa0021230:intron | 40.0% |
| !!! | TATTTTGACTAGGCAACCAG+CGG | + | chr1_1:37564103-37564122 | None:intergenic | 40.0% |
| CTGGTTGCCTAGTCAAAATA+TGG | - | chr1_1:37564103-37564122 | Msa0021230:intron | 40.0% | |
| ATCGAAATTTGGAAAGCCGT+TGG | - | chr1_1:37564204-37564223 | Msa0021230:intron | 40.0% | |
| TCGAAATTTGGAAAGCCGTT+GGG | - | chr1_1:37564205-37564224 | Msa0021230:intron | 40.0% | |
| TGAGCTATATCCAACACAAG+AGG | + | chr1_1:37564306-37564325 | None:intergenic | 40.0% | |
| !! | GATCCACTGAATAATGGATC+TGG | - | chr1_1:37564388-37564407 | Msa0021230:intron | 40.0% |
| AAAGAGTGAACTTCACCTTG+AGG | + | chr1_1:37564539-37564558 | None:intergenic | 40.0% | |
| TGTCCTTATTAGGCTTGTGA+TGG | - | chr1_1:37564649-37564668 | Msa0021230:intron | 40.0% | |
| CATCCATCACAAGCCTAATA+AGG | + | chr1_1:37564655-37564674 | None:intergenic | 40.0% | |
| TGATAGATGTTCACAGCCTT+TGG | - | chr1_1:37564935-37564954 | Msa0021230:intron | 40.0% | |
| TTCTCTGATCCATTCCCAAT+TGG | + | chr1_1:37565217-37565236 | None:intergenic | 40.0% | |
| TTACGGTGTGATAAGATGAC+GGG | + | chr1_1:37565293-37565312 | None:intergenic | 40.0% | |
| ACACTAGCTGAAAGGAAATC+TGG | + | chr1_1:37565319-37565338 | None:intergenic | 40.0% | |
| ATGTTACCTGGTCTACAACA+AGG | - | chr1_1:37565391-37565410 | Msa0021230:intron | 40.0% | |
| TGTTACCTGGTCTACAACAA+GGG | - | chr1_1:37565392-37565411 | Msa0021230:intron | 40.0% | |
| CTCTTCATCCTCCATGTAAA+TGG | + | chr1_1:37565452-37565471 | None:intergenic | 40.0% | |
| CATTTACATGGAGGATGAAG+AGG | - | chr1_1:37565450-37565469 | Msa0021230:intron | 40.0% | |
| TTTCCTTCCACAATCTTTGG+CGG | + | chr1_1:37565835-37565854 | None:intergenic | 40.0% | |
| GTTTCCTAAACCATTCTGGT+TGG | - | chr1_1:37565997-37566016 | Msa0021230:intron | 40.0% | |
| ! | TTGATTGCCGACTATGAAAG+CGG | - | chr1_1:37566120-37566139 | Msa0021230:intron | 40.0% |
| TAACTCTCCGCTTTCATAGT+CGG | + | chr1_1:37566130-37566149 | None:intergenic | 40.0% | |
| TTCAATGACTTCGACAAAGC+CGG | + | chr1_1:37566171-37566190 | None:intergenic | 40.0% | |
| ACCCTTAGTATACACTCTCA+GGG | - | chr1_1:37566390-37566409 | Msa0021230:intron | 40.0% | |
| GGTTAACTGAAAGACGACTA+AGG | - | chr1_1:37566452-37566471 | Msa0021230:intron | 40.0% | |
| !! | AAGGGTTGGTTTGGTTCAAA+CGG | - | chr1_1:37566471-37566490 | Msa0021230:intron | 40.0% |
| ! | AGGGTAGAGATTTTCATGGA+AGG | - | chr1_1:37566494-37566513 | Msa0021230:intron | 40.0% |
| ! | GTAGAGATTTTCATGGAAGG+TGG | - | chr1_1:37566497-37566516 | Msa0021230:intron | 40.0% |
| ! | AGAGATTTTCATGGAAGGTG+GGG | - | chr1_1:37566499-37566518 | Msa0021230:intron | 40.0% |
| AAATACTTAAATGCCCCCAG+CGG | + | chr1_1:37566694-37566713 | None:intergenic | 40.0% | |
| TTGGAAATATGCAGCCTGTA+AGG | - | chr1_1:37566803-37566822 | Msa0021230:intron | 40.0% | |
| TTATGTGGCATGCATCTTTG+GGG | - | chr1_1:37567143-37567162 | Msa0021230:CDS | 40.0% | |
| ! | CGGAAACTTAAGGGTATGTT+TGG | - | chr1_1:37567267-37567286 | Msa0021230:five_prime_UTR | 40.0% |
| ! | CAATGATTCCAGTGCTACTG+CGG | + | chr1_1:37560381-37560400 | None:intergenic | 45.0% |
| GGTAGATGATGATTCAGCGA+CGG | + | chr1_1:37560405-37560424 | None:intergenic | 45.0% | |
| ! | AATTACTGCGGTGCTGGATT+TGG | + | chr1_1:37560437-37560456 | None:intergenic | 45.0% |
| TTATCCAATCAGGCCCATAG+TGG | - | chr1_1:37560797-37560816 | Msa0021230:intron | 45.0% | |
| ! | TTTTCCACTATGGGCCTGAT+TGG | + | chr1_1:37560804-37560823 | None:intergenic | 45.0% |
| GCAAAACGTTGTATGTCTGC+AGG | - | chr1_1:37561338-37561357 | Msa0021230:intron | 45.0% | |
| !! | TCAAGAGTGTCCACAGTATG+TGG | - | chr1_1:37561517-37561536 | Msa0021230:intron | 45.0% |
| TTTGGTGAATGCGCTTGAAG+AGG | - | chr1_1:37561626-37561645 | Msa0021230:intron | 45.0% | |
| GCAACCTAGGCAAATGTTTG+AGG | + | chr1_1:37561766-37561785 | None:intergenic | 45.0% | |
| AAACTCACAGGGTGATTGCT+CGG | + | chr1_1:37561852-37561871 | None:intergenic | 45.0% | |
| CCTTCTAACAAGGGGATGAT+GGG | + | chr1_1:37562000-37562019 | None:intergenic | 45.0% | |
| TCCTTCTAACAAGGGGATGA+TGG | + | chr1_1:37562001-37562020 | None:intergenic | 45.0% | |
| GCAGCTTGAACAGAAGTTTG+AGG | - | chr1_1:37562138-37562157 | Msa0021230:CDS | 45.0% | |
| GAGATTTCGCAAAGCACACA+TGG | - | chr1_1:37562245-37562264 | Msa0021230:intron | 45.0% | |
| GTTGAGACGCCACAATTAGT+TGG | + | chr1_1:37562690-37562709 | None:intergenic | 45.0% | |
| TTGACTCCAAATTTGGGTGG+GGG | + | chr1_1:37562848-37562867 | None:intergenic | 45.0% | |
| TGACCTGACCATTTATGACG+TGG | - | chr1_1:37562885-37562904 | Msa0021230:intron | 45.0% | |
| TTGCCACGTCATAAATGGTC+AGG | + | chr1_1:37562891-37562910 | None:intergenic | 45.0% | |
| ! | GGGGTATGTTTACAAGTTGG+GGG | - | chr1_1:37562923-37562942 | Msa0021230:intron | 45.0% |
| ! | AGGTGTTGCCATGTCATTAG+TGG | - | chr1_1:37563217-37563236 | Msa0021230:intron | 45.0% |
| ! | GGTGTTGCCATGTCATTAGT+GGG | - | chr1_1:37563218-37563237 | Msa0021230:intron | 45.0% |
| ! | AAATTGACTCCACATTGGGG+CGG | - | chr1_1:37563257-37563276 | Msa0021230:CDS | 45.0% |
| !! | GTTTCAGGCTTTCAGGTTTC+TGG | + | chr1_1:37563751-37563770 | None:intergenic | 45.0% |
| !! | ATGGCTTGTTTCAGGCTTTC+AGG | + | chr1_1:37563758-37563777 | None:intergenic | 45.0% |
| GCCGCTACTTGATCGAAATT+TGG | - | chr1_1:37564193-37564212 | Msa0021230:intron | 45.0% | |
| AATTTGGAAAGCCGTTGGGA+TGG | - | chr1_1:37564209-37564228 | Msa0021230:intron | 45.0% | |
| !! | TGAGTATTGGCCTCTTGTGT+TGG | - | chr1_1:37564293-37564312 | Msa0021230:intron | 45.0% |
| GGTGTAGCCAAATTATGGGA+CGG | - | chr1_1:37564445-37564464 | Msa0021230:intron | 45.0% | |
| GTTCACTCCGTCCCATAATT+TGG | + | chr1_1:37564455-37564474 | None:intergenic | 45.0% | |
| TGACAACTACAGATGAAGCC+AGG | + | chr1_1:37565130-37565149 | None:intergenic | 45.0% | |
| CATTCCCAATTGGCAGATGT+CGG | + | chr1_1:37565207-37565226 | None:intergenic | 45.0% | |
| ACATGTCTGAAAATCACCCG+AGG | + | chr1_1:37565375-37565394 | None:intergenic | 45.0% | |
| ATGGAGGATGAAGAGGTAAG+CGG | - | chr1_1:37565457-37565476 | Msa0021230:intron | 45.0% | |
| TGAAGAGGTAAGCGGCTAAA+AGG | - | chr1_1:37565465-37565484 | Msa0021230:intron | 45.0% | |
| GAAGAGGTAAGCGGCTAAAA+GGG | - | chr1_1:37565466-37565485 | Msa0021230:intron | 45.0% | |
| ATATTGCCCGCCAAAGATTG+TGG | - | chr1_1:37565825-37565844 | Msa0021230:intron | 45.0% | |
| TTCCTTCCACAATCTTTGGC+GGG | + | chr1_1:37565834-37565853 | None:intergenic | 45.0% | |
| GGGTTTCCTTCCACAATCTT+TGG | + | chr1_1:37565838-37565857 | None:intergenic | 45.0% | |
| GTGGAGCGTAATGCAGATAA+TGG | - | chr1_1:37565910-37565929 | Msa0021230:intron | 45.0% | |
| ! | GAGCGTAATGCAGATAATGG+TGG | - | chr1_1:37565913-37565932 | Msa0021230:intron | 45.0% |
| GAAGCCAACCAGAATGGTTT+AGG | + | chr1_1:37566004-37566023 | None:intergenic | 45.0% | |
| ACATCCAGCTGACCTTAAAC+CGG | - | chr1_1:37566149-37566168 | Msa0021230:intron | 45.0% | |
| ! | ACTTCGACAAAGCCGGTTTA+AGG | + | chr1_1:37566164-37566183 | None:intergenic | 45.0% |
| GACCCTTAGTATACACTCTC+AGG | - | chr1_1:37566389-37566408 | Msa0021230:intron | 45.0% | |
| ! | CCCCTGAGAGTGTATACTAA+GGG | + | chr1_1:37566394-37566413 | None:intergenic | 45.0% |
| CCCTTAGTATACACTCTCAG+GGG | - | chr1_1:37566391-37566410 | Msa0021230:intron | 45.0% | |
| ! | TCCCCTGAGAGTGTATACTA+AGG | + | chr1_1:37566395-37566414 | None:intergenic | 45.0% |
| ACTGAAAGACGACTAAGGGT+TGG | - | chr1_1:37566457-37566476 | Msa0021230:intron | 45.0% | |
| !! | AAGACGACTAAGGGTTGGTT+TGG | - | chr1_1:37566462-37566481 | Msa0021230:intron | 45.0% |
| !! | GTTGGTTTGGTTCAAACGGA+GGG | - | chr1_1:37566475-37566494 | Msa0021230:intron | 45.0% |
| ! | ACGGAGGGTAGAGATTTTCA+TGG | - | chr1_1:37566490-37566509 | Msa0021230:intron | 45.0% |
| TAGTTATAAGTTAGCGCCGC+TGG | - | chr1_1:37566675-37566694 | Msa0021230:intron | 45.0% | |
| AGTTATAAGTTAGCGCCGCT+GGG | - | chr1_1:37566676-37566695 | Msa0021230:intron | 45.0% | |
| !! | TCTTTGGTTTGCAGGCTTAC+AGG | - | chr1_1:37566970-37566989 | Msa0021230:CDS | 45.0% |
| !! | CTTTGGTTTGCAGGCTTACA+GGG | - | chr1_1:37566971-37566990 | Msa0021230:CDS | 45.0% |
| !! | TTGGGGTTTGTTGAACCCTT+TGG | - | chr1_1:37567160-37567179 | Msa0021230:CDS | 45.0% |
| ATTGAAATTCCGACCGACGC+TGG | - | chr1_1:37560296-37560315 | Msa0021230:three_prime_UTR | 50.0% | |
| TACTATCGCAATGCCAGCGT+CGG | + | chr1_1:37560312-37560331 | None:intergenic | 50.0% | |
| ! | TGCGGTGCTGGATTTGGATT+TGG | + | chr1_1:37560431-37560450 | None:intergenic | 50.0% |
| CGTGCATAGGTTGTTGAGTG+CGG | - | chr1_1:37560523-37560542 | Msa0021230:three_prime_UTR | 50.0% | |
| CCATCGTAACAAACAGGCTG+AGG | + | chr1_1:37560629-37560648 | None:intergenic | 50.0% | |
| ! | CCTCAGCCTGTTTGTTACGA+TGG | - | chr1_1:37560626-37560645 | Msa0021230:intron | 50.0% |
| GCAATGTGCATTCGTCCAGA+AGG | + | chr1_1:37560659-37560678 | None:intergenic | 50.0% | |
| TGGACGAATGCACATTGCTC+AGG | - | chr1_1:37560661-37560680 | Msa0021230:intron | 50.0% | |
| CCCATCATCCCCTTGTTAGA+AGG | - | chr1_1:37561997-37562016 | Msa0021230:intron | 50.0% | |
| AAATGGAAGAGTGGCTGCAG+AGG | + | chr1_1:37562208-37562227 | None:intergenic | 50.0% | |
| TTTGGTCCCCCACCCAAATT+TGG | - | chr1_1:37562839-37562858 | Msa0021230:intron | 50.0% | |
| GGCATTGCCCACTAATGACA+TGG | + | chr1_1:37563228-37563247 | None:intergenic | 50.0% | |
| GCCCCAATGTGGAGTCAATT+TGG | + | chr1_1:37563258-37563277 | None:intergenic | 50.0% | |
| ! | AATTGACTCCACATTGGGGC+GGG | - | chr1_1:37563258-37563277 | Msa0021230:CDS | 50.0% |
| ! | CCTGCAACAGAATTTTGCGC+AGG | + | chr1_1:37563682-37563701 | None:intergenic | 50.0% |
| CCTGCGCAAAATTCTGTTGC+AGG | - | chr1_1:37563679-37563698 | Msa0021230:intron | 50.0% | |
| GTGAACAAGCTAACATCCGC+TGG | - | chr1_1:37564084-37564103 | Msa0021230:intron | 50.0% | |
| TCCTTCCAGATCCATCCCAA+CGG | + | chr1_1:37564223-37564242 | None:intergenic | 50.0% | |
| ATGTCAGCACACTGCATGCA+TGG | + | chr1_1:37564510-37564529 | None:intergenic | 50.0% | |
| ATAGGCCGACATCTGCCAAT+TGG | - | chr1_1:37565199-37565218 | Msa0021230:intron | 50.0% | |
| TAGGCCGACATCTGCCAATT+GGG | - | chr1_1:37565200-37565219 | Msa0021230:intron | 50.0% | |
| CGACATCTGCCAATTGGGAA+TGG | - | chr1_1:37565205-37565224 | Msa0021230:intron | 50.0% | |
| ! | TCTTGCCCTTGTTGTAGACC+AGG | + | chr1_1:37565400-37565419 | None:intergenic | 50.0% |
| TGTGGAAGGAAACCCATGCT+TGG | - | chr1_1:37565843-37565862 | Msa0021230:intron | 50.0% | |
| CAGACTGAAGCCAACCAGAA+TGG | + | chr1_1:37566010-37566029 | None:intergenic | 50.0% | |
| ! | AAAGCCGGTTTAAGGTCAGC+TGG | + | chr1_1:37566156-37566175 | None:intergenic | 50.0% |
| !! | GGTTGGTTTGGTTCAAACGG+AGG | - | chr1_1:37566474-37566493 | Msa0021230:intron | 50.0% |
| ATGGAAGGTGGGGTAAGAGA+GGG | - | chr1_1:37566509-37566528 | Msa0021230:intron | 50.0% | |
| GTTATAAGTTAGCGCCGCTG+GGG | - | chr1_1:37566677-37566696 | Msa0021230:intron | 50.0% | |
| TTATAAGTTAGCGCCGCTGG+GGG | - | chr1_1:37566678-37566697 | Msa0021230:intron | 50.0% | |
| ! | TGATTCCAGTGCTACTGCGG+CGG | + | chr1_1:37560378-37560397 | None:intergenic | 55.0% |
| !! | GCTGAGGCTTTTTAGCGAGG+AGG | + | chr1_1:37560613-37560632 | None:intergenic | 55.0% |
| !! | CAGGCTGAGGCTTTTTAGCG+AGG | + | chr1_1:37560616-37560635 | None:intergenic | 55.0% |
| TGAGCTCTTGCTCGAACACG+TGG | - | chr1_1:37561596-37561615 | Msa0021230:intron | 55.0% | |
| TCTTGCTCGAACACGTGGTG+CGG | - | chr1_1:37561601-37561620 | Msa0021230:intron | 55.0% | |
| ! | CGAACACGTGGTGCGGTTTT+TGG | - | chr1_1:37561608-37561627 | Msa0021230:intron | 55.0% |
| TGCAGAGGCCGCTAGTGTTT+GGG | + | chr1_1:37562193-37562212 | None:intergenic | 55.0% | |
| TTGGGTGGGGGACCAAAACT+GGG | + | chr1_1:37562836-37562855 | None:intergenic | 55.0% | |
| TTTGGGTGGGGGACCAAAAC+TGG | + | chr1_1:37562837-37562856 | None:intergenic | 55.0% | |
| ! | ATTGACTCCACATTGGGGCG+GGG | - | chr1_1:37563259-37563278 | Msa0021230:CDS | 55.0% |
| GAAAGCCGTTGGGATGGATC+TGG | - | chr1_1:37564215-37564234 | Msa0021230:intron | 55.0% | |
| GTTGGGATGGATCTGGAAGG+AGG | - | chr1_1:37564222-37564241 | Msa0021230:intron | 55.0% | |
| TGCCCGCCAAAGATTGTGGA+AGG | - | chr1_1:37565829-37565848 | Msa0021230:intron | 55.0% | |
| CATGGAAGGTGGGGTAAGAG+AGG | - | chr1_1:37566508-37566527 | Msa0021230:intron | 55.0% | |
| TGGAAGGTGGGGTAAGAGAG+GGG | - | chr1_1:37566510-37566529 | Msa0021230:intron | 55.0% | |
| !! | ATCGCAATGCCAGCGTCGGT+CGG | + | chr1_1:37560308-37560327 | None:intergenic | 60.0% |
| CTGCAGAGGCCGCTAGTGTT+TGG | + | chr1_1:37562194-37562213 | None:intergenic | 60.0% | |
| TTGACTCCACATTGGGGCGG+GGG | - | chr1_1:37563260-37563279 | Msa0021230:CDS | 60.0% | |
| GCCGTTGGGATGGATCTGGA+AGG | - | chr1_1:37564219-37564238 | Msa0021230:intron | 60.0% | |
| CACTCTCAGGGGAGAGCTAG+AGG | - | chr1_1:37566402-37566421 | Msa0021230:intron | 60.0% | |
| AAGGTGGGGTAAGAGAGGGG+AGG | - | chr1_1:37566513-37566532 | Msa0021230:intron | 60.0% | |
| ! | TTCCAGTGCTACTGCGGCGG+CGG | + | chr1_1:37560375-37560394 | None:intergenic | 65.0% |
| TTTGGTCCCCCGCCCCAATG+TGG | + | chr1_1:37563269-37563288 | None:intergenic | 65.0% | |
| AGCCGCCGCCGCAGTAGCAC+TGG | - | chr1_1:37560370-37560389 | Msa0021230:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 37560292 | 37567296 | 37560292 | ID=Msa0021230;Name=Msa0021230 |
| chr1_1 | mRNA | 37560292 | 37567296 | 37560292 | ID=Msa0021230-mRNA-1;Parent=Msa0021230;Name=Msa0021230-mRNA-1;_AED=0.11;_eAED=0.11;_QI=61|1|1|1|1|1|10|292|385 |
| chr1_1 | exon | 37560292 | 37560604 | 37560292 | ID=Msa0021230-mRNA-1:exon:11784;Parent=Msa0021230-mRNA-1 |
| chr1_1 | exon | 37560712 | 37560771 | 37560712 | ID=Msa0021230-mRNA-1:exon:11783;Parent=Msa0021230-mRNA-1 |
| chr1_1 | exon | 37561385 | 37561490 | 37561385 | ID=Msa0021230-mRNA-1:exon:11782;Parent=Msa0021230-mRNA-1 |
| chr1_1 | exon | 37561647 | 37561792 | 37561647 | ID=Msa0021230-mRNA-1:exon:11781;Parent=Msa0021230-mRNA-1 |
| chr1_1 | exon | 37562117 | 37562199 | 37562117 | ID=Msa0021230-mRNA-1:exon:11780;Parent=Msa0021230-mRNA-1 |
| chr1_1 | exon | 37562280 | 37562385 | 37562280 | ID=Msa0021230-mRNA-1:exon:11779;Parent=Msa0021230-mRNA-1 |
| chr1_1 | exon | 37563046 | 37563142 | 37563046 | ID=Msa0021230-mRNA-1:exon:11778;Parent=Msa0021230-mRNA-1 |
| chr1_1 | exon | 37563236 | 37563525 | 37563236 | ID=Msa0021230-mRNA-1:exon:11777;Parent=Msa0021230-mRNA-1 |
| chr1_1 | exon | 37566906 | 37567056 | 37566906 | ID=Msa0021230-mRNA-1:exon:11776;Parent=Msa0021230-mRNA-1 |
| chr1_1 | exon | 37567138 | 37567296 | 37567138 | ID=Msa0021230-mRNA-1:exon:11775;Parent=Msa0021230-mRNA-1 |
| chr1_1 | five_prime_UTR | 37567236 | 37567296 | 37567236 | ID=Msa0021230-mRNA-1:five_prime_utr;Parent=Msa0021230-mRNA-1 |
| chr1_1 | CDS | 37567138 | 37567235 | 37567138 | ID=Msa0021230-mRNA-1:cds;Parent=Msa0021230-mRNA-1 |
| chr1_1 | CDS | 37566906 | 37567056 | 37566906 | ID=Msa0021230-mRNA-1:cds;Parent=Msa0021230-mRNA-1 |
| chr1_1 | CDS | 37563236 | 37563525 | 37563236 | ID=Msa0021230-mRNA-1:cds;Parent=Msa0021230-mRNA-1 |
| chr1_1 | CDS | 37563046 | 37563142 | 37563046 | ID=Msa0021230-mRNA-1:cds;Parent=Msa0021230-mRNA-1 |
| chr1_1 | CDS | 37562280 | 37562385 | 37562280 | ID=Msa0021230-mRNA-1:cds;Parent=Msa0021230-mRNA-1 |
| chr1_1 | CDS | 37562117 | 37562199 | 37562117 | ID=Msa0021230-mRNA-1:cds;Parent=Msa0021230-mRNA-1 |
| chr1_1 | CDS | 37561647 | 37561792 | 37561647 | ID=Msa0021230-mRNA-1:cds;Parent=Msa0021230-mRNA-1 |
| chr1_1 | CDS | 37561385 | 37561490 | 37561385 | ID=Msa0021230-mRNA-1:cds;Parent=Msa0021230-mRNA-1 |
| chr1_1 | CDS | 37560712 | 37560771 | 37560712 | ID=Msa0021230-mRNA-1:cds;Parent=Msa0021230-mRNA-1 |
| chr1_1 | CDS | 37560584 | 37560604 | 37560584 | ID=Msa0021230-mRNA-1:cds;Parent=Msa0021230-mRNA-1 |
| chr1_1 | three_prime_UTR | 37560292 | 37560583 | 37560292 | ID=Msa0021230-mRNA-1:three_prime_utr;Parent=Msa0021230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
