AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0022250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0022250 MtrunA17_Chr1g0175381 91.473 387 4 2 1 358 1 387 0.0 715
Msa0022250 MtrunA17_Chr1g0211251 48.168 382 150 7 1 341 1 375 1.27e-119 351
Msa0022250 MtrunA17_Chr7g0250061 48.257 373 147 7 9 341 4 370 1.43e-119 350
Msa0022250 MtrunA17_Chr2g0294291 45.745 376 168 5 1 344 1 372 9.78e-117 343
Msa0022250 MtrunA17_Chr1g0213351 48.936 376 142 7 7 344 8 371 1.36e-116 343
Msa0022250 MtrunA17_Chr8g0371321 47.536 345 141 5 37 341 29 373 5.38e-109 324
Msa0022250 MtrunA17_Chr1g0207571 50.000 322 129 3 36 325 18 339 6.20e-107 318
Msa0022250 MtrunA17_Chr3g0089711 46.111 360 145 9 1 324 1 347 8.41e-101 302
Msa0022250 MtrunA17_Chr3g0089721 45.833 360 146 9 1 324 1 347 4.09e-100 300
Msa0022250 MtrunA17_Chr7g0263281 49.695 328 127 5 38 327 22 349 8.84e-100 300
Msa0022250 MtrunA17_Chr3g0089691 50.694 288 134 5 76 357 8 293 1.09e-94 284
Msa0022250 MtrunA17_Chr1g0181901 43.280 372 143 6 38 341 27 398 1.25e-94 288
Msa0022250 MtrunA17_Chr7g0256751 44.588 388 164 10 1 351 1 374 6.09e-94 287
Msa0022250 MtrunA17_Chr7g0256771 50.164 305 115 8 1 276 1 297 2.99e-85 260
Msa0022250 MtrunA17_Chr4g0063111 37.812 320 160 7 38 324 34 347 2.36e-59 199
Msa0022250 MtrunA17_Chr7g0256761 50.777 193 73 5 136 323 5 180 1.02e-50 168
Msa0022250 MtrunA17_Chr4g0063051 33.129 326 160 10 52 351 42 335 1.43e-43 153
Msa0022250 MtrunA17_Chr2g0295991 32.245 245 153 4 87 323 237 476 4.25e-34 131
Msa0022250 MtrunA17_Chr4g0067301 31.579 247 154 4 87 323 246 487 6.30e-34 130
Msa0022250 MtrunA17_Chr7g0238501 32.365 241 148 7 89 324 317 547 1.70e-33 130
Msa0022250 MtrunA17_Chr4g0039061 31.325 249 158 6 89 332 251 491 1.86e-31 124
Msa0022250 MtrunA17_Chr4g0062951 37.500 184 104 6 84 257 1 183 1.67e-30 114
Msa0022250 MtrunA17_Chr4g0054811 27.900 319 164 8 71 329 461 773 1.36e-27 114
Msa0022250 MtrunA17_Chr4g0031521 28.000 275 153 8 89 324 428 696 2.20e-26 110
Msa0022250 MtrunA17_Chr1g0193691 30.899 178 114 3 151 324 712 884 1.13e-21 96.7
Msa0022250 MtrunA17_Chr3g0105351 29.151 271 129 11 66 321 90 312 1.65e-19 88.2
Msa0022250 MtrunA17_Chr5g0430481 27.881 269 135 8 70 325 154 376 2.30e-19 88.2
Msa0022250 MtrunA17_Chr3g0105371 31.193 218 103 8 66 269 114 298 5.82e-19 86.7
Msa0022250 MtrunA17_Chr4g0022171 28.571 210 121 8 123 331 197 378 5.00e-14 73.2
Msa0022250 MtrunA17_Chr3g0144111 26.778 239 134 7 56 287 8 212 1.40e-13 70.1
Msa0022250 MtrunA17_Chr3g0126511 25.714 210 103 5 118 326 186 343 4.21e-13 69.7
Msa0022250 MtrunA17_Chr2g0317021 32.022 178 78 7 118 288 177 318 2.19e-12 67.4
Msa0022250 MtrunA17_Chr7g0258711 35.052 97 54 3 157 253 1 88 2.66e-12 62.4
Msa0022250 MtrunA17_Chr5g0407161 27.306 271 138 11 37 287 99 330 2.95e-12 67.4
Msa0022250 MtrunA17_Chr2g0324061 27.907 215 126 8 123 336 190 376 3.66e-12 67.4
Msa0022250 MtrunA17_Chr2g0295401 29.897 194 106 7 131 323 189 353 4.73e-12 66.6
Msa0022250 MtrunA17_Chr7g0272061 26.020 196 114 5 130 323 195 361 1.62e-11 65.1
Msa0022250 MtrunA17_Chr4g0070871 31.579 152 73 6 118 269 325 445 3.20e-11 64.3
Msa0022250 MtrunA17_Chr1g0194191 25.600 250 125 9 68 287 116 334 3.50e-11 63.9
Msa0022250 MtrunA17_Chr4g0001761 27.673 159 90 4 118 276 160 293 4.97e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0022250 AT5G06750.3 64.450 391 102 5 1 354 1 391 3.37e-173 487
Msa0022250 AT5G06750.1 64.450 391 102 5 1 354 1 391 3.37e-173 487
Msa0022250 AT5G06750.2 71.479 284 76 2 76 354 26 309 5.14e-147 418
Msa0022250 AT3G51370.1 46.966 379 154 6 1 341 1 370 3.84e-118 347
Msa0022250 AT3G51370.3 46.966 379 154 6 1 341 1 370 3.84e-118 347
Msa0022250 AT5G66080.1 46.073 382 159 6 1 341 1 376 4.21e-115 339
Msa0022250 AT3G12620.2 46.354 384 161 6 5 349 7 384 5.65e-115 339
Msa0022250 AT3G12620.1 46.354 384 161 6 5 349 7 384 5.65e-115 339
Msa0022250 AT3G17090.1 51.258 318 125 2 40 327 45 362 2.40e-114 337
Msa0022250 AT4G38520.2 45.407 381 162 7 1 341 1 375 6.74e-112 332
Msa0022250 AT4G38520.1 45.407 381 162 7 1 341 1 375 6.74e-112 332
Msa0022250 AT4G33920.1 51.227 326 126 4 33 325 15 340 1.28e-110 328
Msa0022250 AT3G55050.1 47.042 355 146 5 7 323 8 358 2.62e-110 327
Msa0022250 AT3G55050.2 47.042 355 146 5 7 323 8 358 2.62e-110 327
Msa0022250 AT5G66080.2 56.250 272 110 3 76 341 4 272 2.78e-110 323
Msa0022250 AT3G51370.2 52.982 285 131 3 59 341 2 285 3.92e-110 323
Msa0022250 AT4G33920.2 57.143 252 104 2 78 325 6 257 4.62e-102 303
Msa0022250 AT5G02760.1 48.256 344 140 4 35 341 20 362 1.20e-98 297
Msa0022250 AT4G33920.3 59.031 227 89 2 103 325 1 227 5.69e-95 284
Msa0022250 AT3G17090.2 47.970 271 111 2 40 280 45 315 4.34e-85 260
Msa0022250 AT3G16560.1 34.310 239 148 3 87 321 245 478 6.60e-36 136
Msa0022250 AT3G16560.4 34.310 239 148 3 87 321 245 478 6.60e-36 136
Msa0022250 AT3G16560.2 34.310 239 148 3 87 321 245 478 6.60e-36 136
Msa0022250 AT5G02400.1 32.090 268 142 5 92 324 404 666 1.66e-34 134
Msa0022250 AT2G35350.1 28.155 309 161 7 71 323 467 770 1.67e-30 123
Msa0022250 AT2G46920.3 26.129 310 158 6 81 324 532 836 1.50e-29 120
Msa0022250 AT2G46920.1 26.129 310 158 6 81 324 532 836 1.50e-29 120
Msa0022250 AT2G46920.2 26.129 310 158 6 81 324 532 836 1.50e-29 120
Msa0022250 AT2G46920.4 26.129 310 158 6 81 324 532 836 1.50e-29 120
Msa0022250 AT3G09400.1 29.104 268 149 6 89 324 384 642 2.17e-29 119
Msa0022250 AT1G07630.1 27.305 282 162 4 89 332 386 662 5.60e-29 118
Msa0022250 AT2G28890.1 27.682 289 163 5 85 332 371 654 6.39e-29 118
Msa0022250 AT3G16560.3 33.649 211 131 3 87 293 245 450 5.17e-28 114
Msa0022250 AT2G40180.1 29.365 252 112 6 80 325 196 387 5.96e-22 96.3
Msa0022250 AT3G09400.2 28.270 237 129 6 89 293 384 611 8.48e-21 94.4
Msa0022250 AT1G07160.1 31.250 208 100 6 118 325 214 378 7.85e-19 87.4
Msa0022250 AT1G67820.1 29.508 244 118 8 66 288 147 357 1.01e-18 87.4
Msa0022250 AT1G67820.2 30.417 240 113 10 70 288 115 321 1.18e-18 87.0
Msa0022250 AT2G30020.1 30.244 205 97 6 118 321 231 390 2.79e-17 82.8
Msa0022250 AT3G16800.4 30.085 236 114 10 101 323 56 253 2.79e-15 75.1
Msa0022250 AT3G16800.6 30.085 236 114 10 101 323 56 253 2.79e-15 75.1
Msa0022250 AT3G16800.2 30.085 236 114 10 101 323 151 348 6.23e-15 75.5
Msa0022250 AT3G16800.1 30.085 236 114 10 101 323 151 348 6.23e-15 75.5
Msa0022250 AT3G16800.3 30.085 236 114 10 101 323 151 348 6.23e-15 75.5
Msa0022250 AT4G28400.3 28.000 225 118 11 73 292 65 250 3.11e-14 72.4
Msa0022250 AT4G28400.1 27.165 254 141 11 44 292 58 272 4.84e-14 72.0
Msa0022250 AT3G51470.1 26.498 317 158 12 42 336 76 339 1.25e-13 71.6
Msa0022250 AT3G51470.2 26.498 317 158 12 42 336 32 295 1.85e-13 70.9
Msa0022250 AT2G20630.1 27.477 222 117 10 73 289 83 265 2.03e-13 70.1
Msa0022250 AT2G20630.2 27.477 222 117 10 73 289 83 265 2.90e-13 70.1
Msa0022250 AT1G03590.1 27.751 209 122 8 120 327 186 366 2.29e-12 68.2
Msa0022250 AT3G05640.2 26.570 207 122 6 118 323 172 349 8.06e-12 66.2
Msa0022250 AT3G05640.1 26.570 207 122 6 118 323 172 349 8.06e-12 66.2
Msa0022250 AT3G05640.3 26.570 207 122 6 118 323 172 349 8.06e-12 66.2
Msa0022250 AT5G36250.1 31.373 204 96 9 131 326 220 387 8.30e-12 66.6
Msa0022250 AT4G03415.1 28.641 206 118 8 123 327 199 376 1.13e-11 66.2
Msa0022250 AT4G03415.3 28.641 206 118 8 123 327 199 376 1.13e-11 66.2
Msa0022250 AT4G03415.2 28.641 206 118 8 123 327 199 376 1.13e-11 66.2
Msa0022250 AT5G10740.1 28.488 172 89 6 118 287 125 264 1.17e-11 65.9
Msa0022250 AT5G10740.2 28.488 172 89 6 118 287 125 264 1.17e-11 65.9
Msa0022250 AT1G43900.1 26.050 238 122 9 65 284 149 350 3.20e-11 64.3
Msa0022250 AT1G07430.1 25.328 229 112 6 70 270 157 354 4.43e-11 64.3
Msa0022250 AT3G62260.3 29.213 178 92 6 116 287 95 244 5.69e-11 63.2
Msa0022250 AT5G53140.1 24.000 175 101 4 118 291 193 336 6.97e-11 63.5
Msa0022250 AT5G53140.2 24.000 175 101 4 118 291 193 336 6.97e-11 63.5
Msa0022250 AT4G26080.1 30.374 214 107 10 117 321 240 420 7.81e-11 63.5
Msa0022250 AT4G31860.3 28.481 158 80 4 118 271 160 288 8.78e-11 62.8
Msa0022250 AT2G40860.4 28.095 210 95 9 118 323 393 550 9.76e-11 63.5

Find 77 sgRNAs with CRISPR-Local

Find 15 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCATTCATTGAGTTTCT+TGG 0.151665 1_1:-41590007 None:intergenic
TCTTCTGATCTCCTCTTTGC+AGG 0.247593 1_1:-41588509 None:intergenic
CATGGAACATGGCGCATTAA+AGG 0.259091 1_1:+41588580 Msa0022250:CDS
TTTGCAGGCATTATGCTCTT+TGG 0.273523 1_1:-41588494 None:intergenic
GCAGGGATTGCTAAAGAAAA+TGG 0.288402 1_1:+41588244 Msa0022250:intron
ACAACAATTTGTGAATCTTC+TGG 0.288612 1_1:-41588550 None:intergenic
AACATCAAACATACAGTTCT+AGG 0.297305 1_1:-41589636 None:intergenic
GTTGTCTTGTTGGTGTTATC+TGG 0.300700 1_1:+41588380 Msa0022250:CDS
TATTTGCATCTGATGGCCTT+TGG 0.352622 1_1:+41589568 Msa0022250:CDS
ATTTGCATCTGATGGCCTTT+GGG 0.364124 1_1:+41589569 Msa0022250:CDS
ACTCTTGTTCGAAGGAGCTT+TGG 0.367886 1_1:+41588325 Msa0022250:CDS
CTATCTCCGAAGATATTATA+AGG 0.376254 1_1:+41588269 Msa0022250:CDS
AATATAACAAATTTATCGTT+AGG 0.381864 1_1:-41589549 None:intergenic
GAGTGCAAGAAGACTTCTTC+AGG 0.385692 1_1:+41589776 Msa0022250:CDS
TGTGTCAATAAACCCTTTGA+TGG 0.386707 1_1:-41589958 None:intergenic
AAAACTCTTGAACACATAGA+TGG 0.402165 1_1:-41589522 None:intergenic
AAACTCAATGAATGAGTTCA+AGG 0.406848 1_1:+41590012 Msa0022250:exon
ATGGGTTCATGTTGTCTTGT+TGG 0.407205 1_1:+41588370 Msa0022250:CDS
CATCTGAAGATGCTCTTGTT+TGG 0.409250 1_1:+41586023 Msa0022250:CDS
GTTCAAGGTTTATTTCTAGA+AGG 0.410536 1_1:+41590027 Msa0022250:three_prime_UTR
CGTGCTGTGATCGGTTCAAC+TGG 0.411906 1_1:+41588439 Msa0022250:CDS
AGCATTCCTTATAATATCTT+CGG 0.421473 1_1:-41588275 None:intergenic
AGATTTGCAGAAGGTTGAAA+AGG 0.421638 1_1:+41589842 Msa0022250:CDS
GATCATAGTCAAGTTGAAAC+TGG 0.428878 1_1:+41586218 Msa0022250:CDS
CAAATTGTTGTTATGAAACA+TGG 0.429867 1_1:+41588562 Msa0022250:CDS
TGAATGAGGCAGCAAGGAAA+AGG 0.452832 1_1:+41589805 Msa0022250:CDS
TTAATTGAAAATACTTTCGC+TGG 0.456335 1_1:+41590174 Msa0022250:three_prime_UTR
GGAGATTCTCGTGCTGTGAT+CGG 0.462599 1_1:+41588430 Msa0022250:CDS
AGAAGGTTGAAAAGGGAATT+CGG 0.464125 1_1:+41589850 Msa0022250:CDS
GATTTGCAGAAGGTTGAAAA+GGG 0.465611 1_1:+41589843 Msa0022250:CDS
GATAACACAGGTCGGCTGAT+AGG 0.467496 1_1:-41589492 None:intergenic
ACACTTCATATCGCTAATCT+TGG 0.471882 1_1:+41588409 Msa0022250:CDS
GCTGTTTCTGCTACGGAGGA+TGG 0.472253 1_1:+41588295 Msa0022250:CDS
CTTGTTGGTGTTATCTGGAA+AGG 0.472649 1_1:+41588385 Msa0022250:CDS
CTTCAAATATGCATCTCCTA+TGG 0.476245 1_1:-41589418 None:intergenic
TTTGTTATATTTGCATCTGA+TGG 0.477307 1_1:+41589561 Msa0022250:CDS
TTCCTGAGTTATCCATCAAA+GGG 0.477943 1_1:+41589946 Msa0022250:CDS
TCAAGCTAATGAAGTAATTG+AGG 0.480948 1_1:+41586196 Msa0022250:intron
ATTCGTGCATAGCGTCGAAC+TGG 0.485130 1_1:-41585962 None:intergenic
ACAGGTCGGCTGATAGGATC+AGG 0.492423 1_1:-41589486 None:intergenic
TTGGGAACACATGACAAATC+AGG 0.500543 1_1:+41589587 Msa0022250:CDS
AAAGGGTTTATTGACACAGT+TGG 0.502286 1_1:+41589963 Msa0022250:CDS
AAGTGGAACCGCGGGAATGA+AGG 0.509280 1_1:-41589462 None:intergenic
GTTCCTGAGTTATCCATCAA+AGG 0.511493 1_1:+41589945 Msa0022250:CDS
GATTTCTGACTCTTGTTCGA+AGG 0.521358 1_1:+41588317 Msa0022250:CDS
TCTTCAGGCTGCTTTGAATG+AGG 0.522502 1_1:+41589791 Msa0022250:CDS
AAGGAATGCTGTTTCTGCTA+CGG 0.533195 1_1:+41588288 Msa0022250:CDS
GAATGAGGCAGCAAGGAAAA+GGG 0.539011 1_1:+41589806 Msa0022250:CDS
TTGTTGGTGTTATCTGGAAA+GGG 0.539840 1_1:+41588386 Msa0022250:CDS
AAATATTATTCAAGCATACA+AGG 0.544413 1_1:-41590285 None:intergenic
ACTTTCGCTGGTGATAAATG+AGG 0.551222 1_1:+41590186 Msa0022250:three_prime_UTR
AAAGCCGCTGATAGCAGCAA+TGG 0.553063 1_1:+41588351 Msa0022250:CDS
ACATCAAACATACAGTTCTA+GGG 0.557511 1_1:-41589635 None:intergenic
GCGCATTAAAGGCATCATCC+AGG 0.559771 1_1:+41588591 Msa0022250:CDS
CTTTCGCTGGTGATAAATGA+GGG 0.562815 1_1:+41590187 Msa0022250:three_prime_UTR
AAGCCGCTGATAGCAGCAAT+GGG 0.565319 1_1:+41588352 Msa0022250:CDS
AGATGCATATTTGAAGCGGC+CGG 0.571705 1_1:+41589425 Msa0022250:CDS
GGCTGATAGGATCAGGCAAG+TGG 0.577398 1_1:-41589479 None:intergenic
GATCAGGCAAGTGGAACCGC+GGG 0.583734 1_1:-41589470 None:intergenic
GAGATATAAAGATTTGCAGA+AGG 0.584024 1_1:+41589833 Msa0022250:CDS
CTGCTTTGAATGAGGCAGCA+AGG 0.594845 1_1:+41589799 Msa0022250:CDS
GAATGCTGTTTCTGCTACGG+AGG 0.597657 1_1:+41588291 Msa0022250:CDS
GAAGGATCAAATGAGAACTC+CGG 0.604037 1_1:-41589444 None:intergenic
GATCAGGTATCAAAATCCAT+AGG 0.620151 1_1:+41589402 Msa0022250:intron
GAACCCATTGCTGCTATCAG+CGG 0.622130 1_1:-41588355 None:intergenic
GATTTGTCATGTGTTCCCAA+AGG 0.627452 1_1:-41589584 None:intergenic
CATTTGATCCTTCATTCCCG+CGG 0.631409 1_1:+41589454 Msa0022250:CDS
GACCTTGAGAAACACTCTTG+TGG 0.632718 1_1:+41586052 Msa0022250:CDS
TAGGAGATGCATATTTGAAG+CGG 0.637442 1_1:+41589421 Msa0022250:CDS
AACCCTTTGATGGATAACTC+AGG 0.640358 1_1:-41589948 None:intergenic
AGAGCATAATGCCTGCAAAG+AGG 0.641485 1_1:+41588498 Msa0022250:CDS
GGATCAGGCAAGTGGAACCG+CGG 0.643319 1_1:-41589471 None:intergenic
GATGGTTCTGCTGATAACAC+AGG 0.665211 1_1:-41589504 None:intergenic
TTGTTATGAAACATGGAACA+TGG 0.679272 1_1:+41588569 Msa0022250:CDS
GTTCTGCTGATAACACAGGT+CGG 0.711534 1_1:-41589500 None:intergenic
CAACCACTGTGATATCATCG+TGG 0.720113 1_1:-41589881 None:intergenic
TTTCCACGATGATATCACAG+TGG 0.728364 1_1:+41589878 Msa0022250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAAGTATTTTCAATTAACA+AGG - chr1_1:41590172-41590191 None:intergenic 20.0%
!!! TTGTTTGAGAGATTTTTTTA+TGG + chr1_1:41590227-41590246 Msa0022250:three_prime_UTR 20.0%
!! AAATATTATTCAAGCATACA+AGG - chr1_1:41590288-41590307 None:intergenic 20.0%
! TTAATTGAAAATACTTTCGC+TGG + chr1_1:41590174-41590193 Msa0022250:three_prime_UTR 25.0%
CAAGGTTTATTTCTAGA+AGG + chr1_1:41590030-41590049 Msa0022250:three_prime_UTR 30.0%
! TTTTTCTTCTTACCCTTTTG+AGG + chr1_1:41590118-41590137 Msa0022250:three_prime_UTR 30.0%
AGCAATGAAAAACCTCAAAA+GGG - chr1_1:41590133-41590152 None:intergenic 30.0%
AAGCAATGAAAAACCTCAAA+AGG - chr1_1:41590134-41590153 None:intergenic 30.0%
CTCAAACAAAGAGAAAAACA+TGG - chr1_1:41590216-41590235 None:intergenic 30.0%
!! TTTATGGTGTTAGATTTTGC+AGG + chr1_1:41590243-41590262 Msa0022250:three_prime_UTR 30.0%
!! TTATGGTGTTAGATTTTGCA+GGG + chr1_1:41590244-41590263 Msa0022250:three_prime_UTR 30.0%
CATCTGAAGATGCTCTTGTT+TGG + chr1_1:41586023-41586042 Msa0022250:CDS 40.0%
ACTTTCGCTGGTGATAAATG+AGG + chr1_1:41590186-41590205 Msa0022250:three_prime_UTR 40.0%
CTTTCGCTGGTGATAAATGA+GGG + chr1_1:41590187-41590206 Msa0022250:three_prime_UTR 40.0%
! ATTCGTGCATAGCGTCGAAC+TGG - chr1_1:41585965-41585984 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 41585920 41590320 41585920 ID=Msa0022250;Name=Msa0022250
chr1_1 mRNA 41585920 41590320 41585920 ID=Msa0022250-mRNA-1;Parent=Msa0022250;Name=Msa0022250-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.5|0.6|1|1|1|5|298|358
chr1_1 exon 41585920 41586073 41585920 ID=Msa0022250-mRNA-1:exon:12293;Parent=Msa0022250-mRNA-1
chr1_1 exon 41586201 41586272 41586201 ID=Msa0022250-mRNA-1:exon:12294;Parent=Msa0022250-mRNA-1
chr1_1 exon 41588248 41588612 41588248 ID=Msa0022250-mRNA-1:exon:12295;Parent=Msa0022250-mRNA-1
chr1_1 exon 41589408 41589644 41589408 ID=Msa0022250-mRNA-1:exon:12296;Parent=Msa0022250-mRNA-1
chr1_1 exon 41589774 41590320 41589774 ID=Msa0022250-mRNA-1:exon:12297;Parent=Msa0022250-mRNA-1
chr1_1 CDS 41585920 41586073 41585920 ID=Msa0022250-mRNA-1:cds;Parent=Msa0022250-mRNA-1
chr1_1 CDS 41586201 41586272 41586201 ID=Msa0022250-mRNA-1:cds;Parent=Msa0022250-mRNA-1
chr1_1 CDS 41588248 41588612 41588248 ID=Msa0022250-mRNA-1:cds;Parent=Msa0022250-mRNA-1
chr1_1 CDS 41589408 41589644 41589408 ID=Msa0022250-mRNA-1:cds;Parent=Msa0022250-mRNA-1
chr1_1 CDS 41589774 41590022 41589774 ID=Msa0022250-mRNA-1:cds;Parent=Msa0022250-mRNA-1
chr1_1 three_prime_UTR 41590023 41590320 41590023 ID=Msa0022250-mRNA-1:three_prime_utr;Parent=Msa0022250-mRNA-1
Gene Sequence

>Msa0022250

ATGTTTTCTTGGTTAGCAAGGATAGTTTCAGCGTGCTTGAGACCAGTTCGACGCTATGCACGAATGAACAAAGACAATGAAAATGATTCTGATGAGTCATCAACATCTGAAGATGCTCTTGTTTGGTGTAAAGACCTTGAGAAACACTCTTGTGCTAATGAAGTAATTGAGGATCATAGTCAAGTTGAAACTGGTTCTGATGCTGTTTTTGTTGGTGTTTATGATGGGATTGCTAAAGAAAATGGTTCTATCTCCGAAGATATTATAAGGAATGCTGTTTCTGCTACGGAGGATGGATTTCTGACTCTTGTTCGAAGGAGCTTTGGAATAAAGCCGCTGATAGCAGCAATGGGTTCATGTTGTCTTGTTGGTGTTATCTGGAAAGGGACACTTCATATCGCTAATCTTGGAGATTCTCGTGCTGTGATCGGTTCAACTGGTCGATCTAACAAGATCGTTGCTGAACAGTTGACCAAAGAGCATAATGCCTGCAAAGAGGAGATCAGAAGAGAACTCAAGTCTTTGCATCCAGAAGATTCACAAATTGTTGTTATGAAACATGGAACATGGCGCATTAAAGGCATCATCCAGGTATCAAAATCCATAGGAGATGCATATTTGAAGCGGCCGGAGTTCTCATTTGATCCTTCATTCCCGCGGTTCCACTTGCCTGATCCTATCAGCCGACCTGTGTTATCAGCAGAACCATCTATGTGTTCAAGAGTTTTACAACCTAACGATAAATTTGTTATATTTGCATCTGATGGCCTTTGGGAACACATGACAAATCAGGAAGCTGCTGAGATCGTTCATAACAACCCTAGAACTGGGAGTGCAAGAAGACTTCTTCAGGCTGCTTTGAATGAGGCAGCAAGGAAAAGGGAAATGAGATATAAAGATTTGCAGAAGGTTGAAAAGGGAATTCGGCGTTTTTTCCACGATGATATCACAGTGGTTGTTATCTTCATCGACCATGAGATGCAAAAGAAGAATGTTAATGTTCCTGAGTTATCCATCAAAGGGTTTATTGACACAGTTGGACCATCAAAATTTAGAAGTTTCCAAGAAACTCAATGA
Protein sequence

>Msa0022250

MFSWLARIVSACLRPVRRYARMNKDNENDSDESSTSEDALVWCKDLEKHSCANEVIEDHSQVETGSDAVFVGVYDGIAKENGSISEDIIRNAVSATEDGFLTLVRRSFGIKPLIAAMGSCCLVGVIWKGTLHIANLGDSRAVIGSTGRSNKIVAEQLTKEHNACKEEIRRELKSLHPEDSQIVVMKHGTWRIKGIIQVSKSIGDAYLKRPEFSFDPSFPRFHLPDPISRPVLSAEPSMCSRVLQPNDKFVIFASDGLWEHMTNQEAAEIVHNNPRTGSARRLLQAALNEAARKREMRYKDLQKVEKGIRRFFHDDITVVVIFIDHEMQKKNVNVPELSIKGFIDTVGPSKFRSFQETQ*