AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0027010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027010 MtrunA17_Chr1g0182901 93.056 288 9 1 1 288 1 277 0.0 550
Msa0027010 MtrunA17_Chr3g0115091 86.111 288 27 2 1 288 1 275 3.65e-170 471
Msa0027010 MtrunA17_Chr2g0277211 37.374 99 57 2 182 277 53 149 9.69e-13 66.2
Msa0027010 MtrunA17_Chr2g0298061 47.761 67 33 1 211 277 103 167 3.69e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027010 AT3G20970.1 79.452 219 34 1 68 286 72 279 1.63e-127 364
Msa0027010 AT1G51390.1 73.640 239 47 4 50 288 53 275 3.04e-122 351
Msa0027010 AT3G20970.2 78.395 162 24 1 68 229 72 222 3.59e-89 265
Msa0027010 AT5G49940.2 33.636 110 67 2 168 277 58 161 5.00e-13 66.6
Msa0027010 AT4G25910.1 47.761 67 33 1 211 277 96 160 1.18e-12 66.6
Msa0027010 AT5G49940.1 46.269 67 34 1 211 277 97 161 2.37e-12 65.9

Find 114 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAATCTTTGCTGCTATTA+TGG 0.182790 1_1:+51217005 Msa0027010:CDS
AAGGAATCGTCGAAGGAATT+AGG 0.229645 1_1:-51215354 None:intergenic
TGCGATGATCAAGGAACTTT+TGG 0.229879 1_1:+51217313 Msa0027010:CDS
CTCCTTTGCCCGGTGGAAAA+TGG 0.230244 1_1:-51216673 None:intergenic
TAACAATAACAGAGTTGTTT+TGG 0.232889 1_1:+51216371 Msa0027010:intron
AAACAAATGCTATAAATTAA+TGG 0.250536 1_1:-51215221 None:intergenic
TTCTGTGATTCCTAAATATT+CGG 0.280771 1_1:+51215391 Msa0027010:five_prime_UTR
ATTATGGATTTCTACTCTTC+AGG 0.292022 1_1:+51217021 Msa0027010:CDS
ACTTGTATTGATATAAGATT+TGG 0.295626 1_1:+51218696 Msa0027010:three_prime_UTR
TTCATCGCGGAACGAGGATT+AGG 0.297871 1_1:-51216790 None:intergenic
TCCATGTTCAAATGGATGTA+TGG 0.310341 1_1:+51218734 Msa0027010:three_prime_UTR
CCATGACGCATCTTCCGATT+TGG 0.310465 1_1:-51216968 None:intergenic
ATATTTAATAAGTTGTGAAT+TGG 0.318599 1_1:+51218448 Msa0027010:three_prime_UTR
CAGCAAAGATTTCAGGCTTA+AGG 0.326720 1_1:-51216996 None:intergenic
ATGAAGGAAGCTTGAGGGTT+TGG 0.330225 1_1:+51216398 Msa0027010:five_prime_UTR
GTCTTTGGAAGCGGCAGCTT+GGG 0.330417 1_1:-51217064 None:intergenic
AAATCAACCACGATGTTATC+TGG 0.341092 1_1:-51218857 None:intergenic
ACTGGCCGTGTCATGCAATA+AGG 0.341952 1_1:+51218891 Msa0027010:three_prime_UTR
ATAATAGCAGCAAAGATTTC+AGG 0.354714 1_1:-51217003 None:intergenic
AACATAAGAGACTCTGGATT+TGG 0.370612 1_1:-51216724 None:intergenic
ATCGTGAATTGCTGTGTCTT+TGG 0.372631 1_1:-51217079 None:intergenic
AGGAATCGTCGAAGGAATTA+GGG 0.375445 1_1:-51215353 None:intergenic
GATTTGGAGTGGACTGTGTT+TGG 0.376256 1_1:-51216708 None:intergenic
AACAAATGCTATAAATTAAT+GGG 0.378243 1_1:-51215220 None:intergenic
AGGCATTATTACTTGCCTAT+TGG 0.384627 1_1:+51218656 Msa0027010:three_prime_UTR
TCATCGCGGAACGAGGATTA+GGG 0.388776 1_1:-51216789 None:intergenic
ACTTGCCTATTGGCATTGTA+TGG 0.390828 1_1:+51218666 Msa0027010:three_prime_UTR
TTCTGTATGGACATCGTGTT+AGG 0.395232 1_1:-51218543 None:intergenic
CAAAGGTGTGGAACAAGAAT+TGG 0.398435 1_1:+51218292 Msa0027010:CDS
CAGAAATCTTCGATTGTAGA+AGG 0.401809 1_1:-51215373 None:intergenic
TTCAGAGTCACCGAAGAACT+TGG 0.410747 1_1:-51217780 None:intergenic
TCTATCTGCCTGGGCTGCTA+TGG 0.417748 1_1:+51218586 Msa0027010:three_prime_UTR
GGTGGTACCCTCTATCTGCC+TGG 0.418536 1_1:+51218576 Msa0027010:three_prime_UTR
ATTGCATGACACGGCCAGTT+TGG 0.422105 1_1:-51218887 None:intergenic
TCTTCGGTGACTCTGAAATC+AGG 0.425848 1_1:+51217786 Msa0027010:CDS
TGGTCTTTCCTTCTGAATCA+AGG 0.425927 1_1:+51218617 Msa0027010:three_prime_UTR
TGTGATTAGTCTCTGATTTG+AGG 0.428418 1_1:-51216540 None:intergenic
GTGATTAGTCTCTGATTTGA+GGG 0.430671 1_1:-51216539 None:intergenic
ACCTATGCAACCTTTCTGTA+TGG 0.436964 1_1:-51218556 None:intergenic
TTGATTTCATACAGCCAAAC+TGG 0.444906 1_1:+51218873 Msa0027010:three_prime_UTR
GGTGGATGAAGGAAGCTTGA+GGG 0.447708 1_1:+51216393 Msa0027010:five_prime_UTR
ATGGATGTATGGGCATGTTA+AGG 0.449990 1_1:+51218745 Msa0027010:three_prime_UTR
TGTCTTTGGAAGCGGCAGCT+TGG 0.456320 1_1:-51217065 None:intergenic
GGGCTGCTATGGATGGCTCT+TGG 0.464456 1_1:+51218597 Msa0027010:three_prime_UTR
GAAGCTTGAGGGTTTGGAGC+AGG 0.466202 1_1:+51216404 Msa0027010:five_prime_UTR
ATAGCAGCCCAGGCAGATAG+AGG 0.468711 1_1:-51218584 None:intergenic
GGTGGGGACATTGTGTATTG+TGG 0.468819 1_1:+51217368 Msa0027010:CDS
TAGTGGCTGCCCAAGTTCTT+CGG 0.469327 1_1:+51217770 Msa0027010:CDS
AACCACGATGTTATCTGGCT+TGG 0.472005 1_1:-51218852 None:intergenic
TGCTATAGGTATTCTAGCGT+TGG 0.474248 1_1:+51218817 Msa0027010:three_prime_UTR
TCTGCCTGGGCTGCTATGGA+TGG 0.491158 1_1:+51218590 Msa0027010:three_prime_UTR
TTCAGTAACCTTGATTCAGA+AGG 0.492674 1_1:-51218625 None:intergenic
AGATGGAAATGGTGAGGCAG+AGG 0.494910 1_1:-51216650 None:intergenic
GGAACGAGGATTAGGGAAAT+CGG 0.495781 1_1:-51216782 None:intergenic
CAAGAAGAAGCAGCTTTAAG+TGG 0.496309 1_1:+51218323 Msa0027010:CDS
AGCAGCTTTAAGTGGACAAA+CGG 0.505572 1_1:+51218331 Msa0027010:CDS
AGAGCCATCCATAGCAGCCC+AGG 0.508547 1_1:-51218594 None:intergenic
TGCCTATTGGCATTGTATGG+AGG 0.515996 1_1:+51218669 Msa0027010:three_prime_UTR
GCCTATTGGCATTGTATGGA+GGG 0.518540 1_1:+51218670 Msa0027010:three_prime_UTR
CCATGTTCAAATGGATGTAT+GGG 0.530038 1_1:+51218735 Msa0027010:three_prime_UTR
TCGTATCCGACCAACTGTAC+AGG 0.532621 1_1:+51217340 Msa0027010:CDS
CAAATCGGAAGATGCGTCAT+GGG 0.534660 1_1:+51216969 Msa0027010:CDS
GCCCTCCATACAATGCCAAT+AGG 0.538366 1_1:-51218671 None:intergenic
GGATGAAACATAAGAGACTC+TGG 0.539372 1_1:-51216730 None:intergenic
ACATCCATGACAGGTTTACC+AGG 0.541119 1_1:-51216751 None:intergenic
TGAAACAGTTGCGATGATCA+AGG 0.541980 1_1:+51217304 Msa0027010:CDS
GTGGTACCCTCTATCTGCCT+GGG 0.544078 1_1:+51218577 Msa0027010:three_prime_UTR
AATTGCTGTGTCTTTGGAAG+CGG 0.547638 1_1:-51217073 None:intergenic
CCAAATCGGAAGATGCGTCA+TGG 0.548834 1_1:+51216968 Msa0027010:CDS
GGGTGGATGAAGGAAGCTTG+AGG 0.549678 1_1:+51216392 Msa0027010:five_prime_UTR
TTGCTGCATTTACAGGTCAA+AGG 0.551548 1_1:+51218275 Msa0027010:intron
AACGCTAGAATACCTATAGC+AGG 0.556944 1_1:-51218815 None:intergenic
CGACCAACTGTACAGGATGA+TGG 0.562611 1_1:+51217347 Msa0027010:CDS
GTGGAAAATGGAGATGGAAA+TGG 0.563081 1_1:-51216661 None:intergenic
AAACATACTCCTCCTTTGCC+CGG 0.564888 1_1:-51216683 None:intergenic
TCAGAGTCACCGAAGAACTT+GGG 0.566646 1_1:-51217779 None:intergenic
GCATTGCGGTTGTAGTTGCA+AGG 0.571191 1_1:-51216616 None:intergenic
CCCATACATCCATTTGAACA+TGG 0.572234 1_1:-51218735 None:intergenic
GAGTCTCTTATGTTTCATCC+TGG 0.574002 1_1:+51216733 Msa0027010:CDS
TGCCCGGTGGAAAATGGAGA+TGG 0.578393 1_1:-51216667 None:intergenic
CCACCATCATCCTGTACAGT+TGG 0.579401 1_1:-51217350 None:intergenic
ATTACAACAACAGTGCATGA+TGG 0.581684 1_1:+51218394 Msa0027010:three_prime_UTR
AACTGTACAGGATGATGGTG+GGG 0.584854 1_1:+51217352 Msa0027010:CDS
GGTAAACCTGTCATGGATGT+TGG 0.587174 1_1:+51216754 Msa0027010:CDS
ATACAGAAAGGTTGCATAGG+TGG 0.591872 1_1:+51218558 Msa0027010:three_prime_UTR
TCATCCTGGTAAACCTGTCA+TGG 0.592000 1_1:+51216747 Msa0027010:CDS
AACAAAAGACTGAACTGTGA+AGG 0.592699 1_1:+51216452 Msa0027010:five_prime_UTR
GGAGAATTCATCGCGGAACG+AGG 0.593137 1_1:-51216796 None:intergenic
CAACTGTACAGGATGATGGT+GGG 0.594080 1_1:+51217351 Msa0027010:CDS
ATCGTCAAACTCAAAATGCA+AGG 0.595778 1_1:+51217741 Msa0027010:CDS
AACACGATGTCCATACAGAA+AGG 0.599506 1_1:+51218546 Msa0027010:three_prime_UTR
GCTTGAGGGTTTGGAGCAGG+AGG 0.600028 1_1:+51216407 Msa0027010:five_prime_UTR
CCAACTGTACAGGATGATGG+TGG 0.609164 1_1:+51217350 Msa0027010:CDS
GCGCTACCAACATCCATGAC+AGG 0.609183 1_1:-51216760 None:intergenic
CATCATCCTGTACAGTTGGT+CGG 0.612141 1_1:-51217346 None:intergenic
ATTGTAGAAGGAATCGTCGA+AGG 0.619394 1_1:-51215361 None:intergenic
GCTTGGGAGTCTAGAAAGAG+TGG 0.628813 1_1:-51217048 None:intergenic
GCATTTACAGGTCAAAGGTG+TGG 0.632082 1_1:+51218280 Msa0027010:intron
TAGCAGCCCAGGCAGATAGA+GGG 0.637192 1_1:-51218583 None:intergenic
AAGAGACTCTGGATTTGGAG+TGG 0.639473 1_1:-51216719 None:intergenic
TCCATACAGAAAGGTTGCAT+AGG 0.641462 1_1:+51218555 Msa0027010:three_prime_UTR
TAGTTGCAAGGTTGAAACGA+TGG 0.642224 1_1:-51216604 None:intergenic
AAAATGCAAGGAGCATGTAG+TGG 0.643660 1_1:+51217753 Msa0027010:CDS
GGAATTAGGGTTCTTCGATG+CGG 0.653349 1_1:-51215340 None:intergenic
GACTGAACTGTGAAGGATGA+CGG 0.654622 1_1:+51216459 Msa0027010:exon
CATACTCCTCCTTTGCCCGG+TGG 0.656092 1_1:-51216680 None:intergenic
AAAATCCTTATTGCATGACA+CGG 0.661294 1_1:-51218896 None:intergenic
TGTGAAGGATGACGGTGGTG+AGG 0.663047 1_1:+51216467 Msa0027010:exon
TTAGGAAAACGATTACGACT+AGG 0.664261 1_1:+51216505 Msa0027010:CDS
AAATGGAGATGGAAATGGTG+AGG 0.703537 1_1:-51216656 None:intergenic
GCTGATGCATTATGTACCTG+AGG 0.715793 1_1:+51217821 Msa0027010:CDS
CTCCAAGCCAGATAACATCG+TGG 0.760784 1_1:+51218850 Msa0027010:three_prime_UTR
AGCAAGAGGAGAATTCATCG+CGG 0.788482 1_1:-51216803 None:intergenic
TGAACTGTGAAGGATGACGG+TGG 0.822277 1_1:+51216462 Msa0027010:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATGAAATTTAAGTAAA+AGG - chr1_1:51217162-51217181 None:intergenic 10.0%
!!! TTTTACTTAAATTTCATAAA+AGG + chr1_1:51217161-51217180 Msa0027010:intron 10.0%
!! AACAAATGCTATAAATTAAT+GGG - chr1_1:51215223-51215242 None:intergenic 15.0%
!! AAACAAATGCTATAAATTAA+TGG - chr1_1:51215224-51215243 None:intergenic 15.0%
!! ATTTGTATCAATATGTTTAA+TGG + chr1_1:51216251-51216270 Msa0027010:intron 15.0%
!!! TAATTTTATTTCAAGGAATT+TGG + chr1_1:51217136-51217155 Msa0027010:intron 15.0%
!!! GAACTTTATCTTATTATTTT+AGG + chr1_1:51217519-51217538 Msa0027010:intron 15.0%
!!! TCATCAATTATTTTTTAACA+CGG - chr1_1:51217549-51217568 None:intergenic 15.0%
!! ATATAAAAAACAAGTAAAAG+AGG - chr1_1:51217696-51217715 None:intergenic 15.0%
!! ATATTTAATAAGTTGTGAAT+TGG + chr1_1:51218448-51218467 Msa0027010:three_prime_UTR 15.0%
!! AAAACAAAAACAAAAACAAA+AGG + chr1_1:51218768-51218787 Msa0027010:three_prime_UTR 15.0%
!!! TATACCGTATTATTTTTTTT+GGG + chr1_1:51218926-51218945 Msa0027010:three_prime_UTR 15.0%
!! AAAAATGAATCCGAATATTT+AGG - chr1_1:51215404-51215423 None:intergenic 20.0%
!!! TTTTGCATAAAAAACAAGTT+TGG - chr1_1:51215595-51215614 None:intergenic 20.0%
!!! GAAACAATAGTTTTAAATTG+TGG - chr1_1:51215857-51215876 None:intergenic 20.0%
!!! TAATGAGTTGGATAAAAATA+TGG + chr1_1:51216039-51216058 Msa0027010:intron 20.0%
!! CAAATTATTACTGTTACTAT+AGG - chr1_1:51216236-51216255 None:intergenic 20.0%
!! TACAAAGACAAATATGATAT+GGG - chr1_1:51216280-51216299 None:intergenic 20.0%
!! AACCCAAAAATAAGATAAAA+AGG + chr1_1:51216319-51216338 Msa0027010:intron 20.0%
!! ACCCAAAAATAAGATAAAAA+GGG + chr1_1:51216320-51216339 Msa0027010:intron 20.0%
!!! ACCCTTTTTATCTTATTTTT+GGG - chr1_1:51216324-51216343 None:intergenic 20.0%
!!! AAATCAATTTTTGCTATTGA+TGG + chr1_1:51216826-51216845 Msa0027010:CDS 20.0%
!! TAAAAAAACAATCAGAAAAC+AGG - chr1_1:51216896-51216915 None:intergenic 20.0%
!!! ATTGTTTTTTTAATTGTTGC+AGG + chr1_1:51216904-51216923 Msa0027010:intron 20.0%
!!! ATTGCTGTAATTTTATTTCA+AGG + chr1_1:51217129-51217148 Msa0027010:intron 20.0%
!! ATATAAATGGAAACAACAAA+TGG - chr1_1:51217883-51217902 None:intergenic 20.0%
!!! GTTGTTTCCATTTATATTTA+TGG + chr1_1:51217886-51217905 Msa0027010:intron 20.0%
!! TCAATCACCATAAATATAAA+TGG - chr1_1:51217896-51217915 None:intergenic 20.0%
!! AGCATATCTTATAAGTTAAT+TGG - chr1_1:51218028-51218047 None:intergenic 20.0%
!! AAATAGAAAACCTAATTCAA+TGG - chr1_1:51218060-51218079 None:intergenic 20.0%
!!! TTATTTAAAGCAGCATTAAA+AGG + chr1_1:51218188-51218207 Msa0027010:intron 20.0%
!! GTTGAACAATTCATATAAAT+TGG - chr1_1:51218221-51218240 None:intergenic 20.0%
!!! CTCATATTTTTCTATAATTG+CGG + chr1_1:51218364-51218383 Msa0027010:three_prime_UTR 20.0%
!!! ACTTGTATTGATATAAGATT+TGG + chr1_1:51218696-51218715 Msa0027010:three_prime_UTR 20.0%
!!! CTATACCGTATTATTTTTTT+TGG + chr1_1:51218925-51218944 Msa0027010:three_prime_UTR 20.0%
!! TTCACCCAAAAAAAATAATA+CGG - chr1_1:51218933-51218952 None:intergenic 20.0%
! AGATAAGAAGAAGAAAAAGA+AGG - chr1_1:51215268-51215287 None:intergenic 25.0%
! TTCTGTGATTCCTAAATATT+CGG + chr1_1:51215391-51215410 Msa0027010:five_prime_UTR 25.0%
!! TGTAGTTTATGGTAATGATA+AGG + chr1_1:51215507-51215526 Msa0027010:intron 25.0%
!!! TGATAAGGTGTTGAAAAATA+TGG + chr1_1:51215522-51215541 Msa0027010:intron 25.0%
! AAGAGTTTATTGAAATACAC+TGG + chr1_1:51215645-51215664 Msa0027010:intron 25.0%
! AATACACTGGAAAAAGATTA+TGG + chr1_1:51215658-51215677 Msa0027010:intron 25.0%
!!! CAATAGTTTTAAATTGTGGA+CGG - chr1_1:51215853-51215872 None:intergenic 25.0%
! TAAAACTATTGTTTCGATAG+TGG + chr1_1:51215862-51215881 Msa0027010:intron 25.0%
! TATAAGAGAAACAATCAAGA+AGG + chr1_1:51216006-51216025 Msa0027010:intron 25.0%
! GTACAAAGACAAATATGATA+TGG - chr1_1:51216281-51216300 None:intergenic 25.0%
!!! GACCCTTTTTATCTTATTTT+TGG - chr1_1:51216325-51216344 None:intergenic 25.0%
!! TAACAATAACAGAGTTGTTT+TGG + chr1_1:51216371-51216390 Msa0027010:intron 25.0%
!!! AACAATAACAGAGTTGTTTT+GGG + chr1_1:51216372-51216391 Msa0027010:intron 25.0%
! AATAAAAGAAATGAAAGGAG+TGG - chr1_1:51216869-51216888 None:intergenic 25.0%
! GCACAAATAAAAGAAATGAA+AGG - chr1_1:51216874-51216893 None:intergenic 25.0%
! AGAGTATAGATTATTCATTG+AGG - chr1_1:51217449-51217468 None:intergenic 25.0%
! ATGCTAACAAATCATACTAA+AGG + chr1_1:51217585-51217604 Msa0027010:intron 25.0%
!! GGAAATTTGCTCATTTAATT+TGG - chr1_1:51217620-51217639 None:intergenic 25.0%
! ACATATTACAAGGATAAACT+TGG + chr1_1:51217999-51218018 Msa0027010:intron 25.0%
!! AGGTTTTCTATTTATCTTAC+AGG + chr1_1:51218067-51218086 Msa0027010:intron 25.0%
! TTCTATTTATCTTACAGGAT+TGG + chr1_1:51218072-51218091 Msa0027010:intron 25.0%
! AAAAACAAAAACAAAAGGCA+TGG + chr1_1:51218773-51218792 Msa0027010:three_prime_UTR 25.0%
!!! TTGATTTTTTTTCCTGCTAT+AGG + chr1_1:51218803-51218822 Msa0027010:three_prime_UTR 25.0%
AGAAGAAAAAGAAGGAAAGA+CGG - chr1_1:51215260-51215279 None:intergenic 30.0%
!! TATTCGGATTCATTTTTCCA+AGG + chr1_1:51215407-51215426 Msa0027010:five_prime_UTR 30.0%
AGAGAAAACTAATGTTACCT+TGG - chr1_1:51215427-51215446 None:intergenic 30.0%
! GTTCAAGTTTCTGTAGTTTA+TGG + chr1_1:51215496-51215515 Msa0027010:intron 30.0%
CAATCATATCGCAATTACAA+CGG - chr1_1:51215787-51215806 None:intergenic 30.0%
TTGTAATTGCGATATGATTG+TGG + chr1_1:51215787-51215806 Msa0027010:intron 30.0%
GTGACTACAAAATAAAGGTT+TGG - chr1_1:51215819-51215838 None:intergenic 30.0%
CAACTGTGACTACAAAATAA+AGG - chr1_1:51215824-51215843 None:intergenic 30.0%
!! TTATTTTGTAGTCACAGTTG+CGG + chr1_1:51215824-51215843 Msa0027010:intron 30.0%
TCTCTTTACTACATAATCCA+TGG - chr1_1:51215930-51215949 None:intergenic 30.0%
AGTAAAGAGAGTAGATTAGA+TGG + chr1_1:51215940-51215959 Msa0027010:intron 30.0%
GGATCTAACTATTAATGAGT+TGG + chr1_1:51216027-51216046 Msa0027010:intron 30.0%
! ATGATAGCATGTTTTGCTTA+GGG - chr1_1:51216212-51216231 None:intergenic 30.0%
! TATGATAGCATGTTTTGCTT+AGG - chr1_1:51216213-51216232 None:intergenic 30.0%
! GCAAAAATTGATTTAGCAAG+AGG - chr1_1:51216820-51216839 None:intergenic 30.0%
! TTTTGTCACTGTTACCAAAT+CGG + chr1_1:51216954-51216973 Msa0027010:CDS 30.0%
ATAATAGCAGCAAAGATTTC+AGG - chr1_1:51217006-51217025 None:intergenic 30.0%
TGAAATCTTTGCTGCTATTA+TGG + chr1_1:51217005-51217024 Msa0027010:CDS 30.0%
ATTATGGATTTCTACTCTTC+AGG + chr1_1:51217021-51217040 Msa0027010:CDS 30.0%
!!! ATTCAGTTTTGAGATCTTGA+AGG - chr1_1:51217251-51217270 None:intergenic 30.0%
TTCAAGATCTCAAAACTGAA+TGG + chr1_1:51217250-51217269 Msa0027010:intron 30.0%
AAATAACAAGGGGAAACTTA+CGG - chr1_1:51217401-51217420 None:intergenic 30.0%
!! TAAGTTTCCCCTTGTTATTT+GGG + chr1_1:51217401-51217420 Msa0027010:intron 30.0%
ATTGAAACCCAAATAACAAG+GGG - chr1_1:51217411-51217430 None:intergenic 30.0%
CATTGAAACCCAAATAACAA+GGG - chr1_1:51217412-51217431 None:intergenic 30.0%
ACATTGAAACCCAAATAACA+AGG - chr1_1:51217413-51217432 None:intergenic 30.0%
!! GTTTGTTTTCTCTAGAGATA+CGG + chr1_1:51217716-51217735 Msa0027010:intron 30.0%
!! TTTGTTTTCTCTAGAGATAC+GGG + chr1_1:51217717-51217736 Msa0027010:intron 30.0%
TACAAATGCTTCATTACAGA+AGG - chr1_1:51217945-51217964 None:intergenic 30.0%
AATCAACTTAAGAATGCCAT+AGG - chr1_1:51217973-51217992 None:intergenic 30.0%
!!! GCATTCTTAAGTTGATTTTG+AGG + chr1_1:51217976-51217995 Msa0027010:intron 30.0%
!! GATTTTGAGGACATATTACA+AGG + chr1_1:51217989-51218008 Msa0027010:intron 30.0%
TAGTTGTCATCCATTGAATT+AGG + chr1_1:51218047-51218066 Msa0027010:intron 30.0%
AAAATCCTTATTGCATGACA+CGG - chr1_1:51218899-51218918 None:intergenic 30.0%
GAAGAAAAAGAAGGAAAGAC+GGG - chr1_1:51215259-51215278 None:intergenic 35.0%
CAGAAATCTTCGATTGTAGA+AGG - chr1_1:51215376-51215395 None:intergenic 35.0%
ATGCTACAAACAAAAGAGGT+TGG - chr1_1:51215473-51215492 None:intergenic 35.0%
CGTTATGCTACAAACAAAAG+AGG - chr1_1:51215477-51215496 None:intergenic 35.0%
AATTGCGATATGATTGTGGA+AGG + chr1_1:51215791-51215810 Msa0027010:intron 35.0%
AAAGAGAGTAGATTAGATGG+AGG + chr1_1:51215943-51215962 Msa0027010:intron 35.0%
AAGAGAGTAGATTAGATGGA+GGG + chr1_1:51215944-51215963 Msa0027010:intron 35.0%
TCTTATCTTATCCCACTAAG+TGG - chr1_1:51216110-51216129 None:intergenic 35.0%
TAGTGGGATAAGATAAGACT+TGG + chr1_1:51216112-51216131 Msa0027010:intron 35.0%
GCTGTTATTGTTTCAACAGT+GGG + chr1_1:51216134-51216153 Msa0027010:intron 35.0%
!!! AATAACAGAGTTGTTTTGGG+TGG + chr1_1:51216375-51216394 Msa0027010:intron 35.0%
!! CACAGTTCAGTCTTTTGTTT+TGG - chr1_1:51216451-51216470 None:intergenic 35.0%
AACAAAAGACTGAACTGTGA+AGG + chr1_1:51216452-51216471 Msa0027010:five_prime_UTR 35.0%
! GTCGTAATCGTTTTCCTAAT+CGG - chr1_1:51216504-51216523 None:intergenic 35.0%
TTAGGAAAACGATTACGACT+AGG + chr1_1:51216505-51216524 Msa0027010:CDS 35.0%
!! GTGATTAGTCTCTGATTTGA+GGG - chr1_1:51216542-51216561 None:intergenic 35.0%
!! TGTGATTAGTCTCTGATTTG+AGG - chr1_1:51216543-51216562 None:intergenic 35.0%
! TACAAATTGTTTTCGCTGTC+TGG + chr1_1:51216573-51216592 Msa0027010:CDS 35.0%
! ACAAATTGTTTTCGCTGTCT+GGG + chr1_1:51216574-51216593 Msa0027010:CDS 35.0%
!! AGGAAGAGAAAAAAGCATTG+CGG - chr1_1:51216633-51216652 None:intergenic 35.0%
AACATAAGAGACTCTGGATT+TGG - chr1_1:51216727-51216746 None:intergenic 35.0%
!! GTAAGTTTCCCCTTGTTATT+TGG + chr1_1:51217400-51217419 Msa0027010:intron 35.0%
CGACAACAATGATATTGTCT+TGG - chr1_1:51217641-51217660 None:intergenic 35.0%
!! TTGTTTTCTCTAGAGATACG+GGG + chr1_1:51217718-51217737 Msa0027010:intron 35.0%
ATCGTCAAACTCAAAATGCA+AGG + chr1_1:51217741-51217760 Msa0027010:CDS 35.0%
!! TAATGCAAACTTGTTACCTC+AGG - chr1_1:51217840-51217859 None:intergenic 35.0%
AAGCATTTGTACCTTTCCTA+TGG + chr1_1:51217954-51217973 Msa0027010:intron 35.0%
ACTTAAGAATGCCATAGGAA+AGG - chr1_1:51217968-51217987 None:intergenic 35.0%
TAGTATGCACAGTGACAAAT+AGG - chr1_1:51218132-51218151 None:intergenic 35.0%
ATTACAACAACAGTGCATGA+TGG + chr1_1:51218394-51218413 Msa0027010:three_prime_UTR 35.0%
ATCTCACTGGAATAGTATGA+AGG + chr1_1:51218515-51218534 Msa0027010:intron 35.0%
TTCAGTAACCTTGATTCAGA+AGG - chr1_1:51218628-51218647 None:intergenic 35.0%
AGGCATTATTACTTGCCTAT+TGG + chr1_1:51218656-51218675 Msa0027010:three_prime_UTR 35.0%
TCCATGTTCAAATGGATGTA+TGG + chr1_1:51218734-51218753 Msa0027010:three_prime_UTR 35.0%
CCATGTTCAAATGGATGTAT+GGG + chr1_1:51218735-51218754 Msa0027010:three_prime_UTR 35.0%
AAATCAACCACGATGTTATC+TGG - chr1_1:51218860-51218879 None:intergenic 35.0%
TTGATTTCATACAGCCAAAC+TGG + chr1_1:51218873-51218892 Msa0027010:three_prime_UTR 35.0%
AGGAATCGTCGAAGGAATTA+GGG - chr1_1:51215356-51215375 None:intergenic 40.0%
AAGGAATCGTCGAAGGAATT+AGG - chr1_1:51215357-51215376 None:intergenic 40.0%
ATTGTAGAAGGAATCGTCGA+AGG - chr1_1:51215364-51215383 None:intergenic 40.0%
! AGAGGTTGGCTAAGTTAAGT+CGG - chr1_1:51215459-51215478 None:intergenic 40.0%
GATTATGGACATGTCGTAAG+TGG + chr1_1:51215673-51215692 Msa0027010:intron 40.0%
CTCTCTACATGCTCAAATCA+CGG - chr1_1:51215902-51215921 None:intergenic 40.0%
GCATGTAGAGAGAAAATCCA+TGG + chr1_1:51215910-51215929 Msa0027010:intron 40.0%
AGAGAGTAGATTAGATGGAG+GGG + chr1_1:51215945-51215964 Msa0027010:intron 40.0%
GGCTGTTATTGTTTCAACAG+TGG + chr1_1:51216133-51216152 Msa0027010:intron 40.0%
TAGTTGCAAGGTTGAAACGA+TGG - chr1_1:51216607-51216626 None:intergenic 40.0%
AAATGGAGATGGAAATGGTG+AGG - chr1_1:51216659-51216678 None:intergenic 40.0%
GTGGAAAATGGAGATGGAAA+TGG - chr1_1:51216664-51216683 None:intergenic 40.0%
! TTTCCATCTCCATTTTCCAC+CGG + chr1_1:51216664-51216683 Msa0027010:CDS 40.0%
GGATGAAACATAAGAGACTC+TGG - chr1_1:51216733-51216752 None:intergenic 40.0%
GAGTCTCTTATGTTTCATCC+TGG + chr1_1:51216733-51216752 Msa0027010:CDS 40.0%
AAATGAAAGGAGTGGAGAGA+GGG - chr1_1:51216861-51216880 None:intergenic 40.0%
! GGAATCACTCGTGTTTTCTT+TGG + chr1_1:51216925-51216944 Msa0027010:intron 40.0%
CAGCAAAGATTTCAGGCTTA+AGG - chr1_1:51216999-51217018 None:intergenic 40.0%
! AATTGCTGTGTCTTTGGAAG+CGG - chr1_1:51217076-51217095 None:intergenic 40.0%
ATCGTGAATTGCTGTGTCTT+TGG - chr1_1:51217082-51217101 None:intergenic 40.0%
ATGCTTACCTGTTTGCATAC+AGG + chr1_1:51217274-51217293 Msa0027010:intron 40.0%
GAATCATCCTGTATGCAAAC+AGG - chr1_1:51217284-51217303 None:intergenic 40.0%
TGAAACAGTTGCGATGATCA+AGG + chr1_1:51217304-51217323 Msa0027010:CDS 40.0%
! TGCGATGATCAAGGAACTTT+TGG + chr1_1:51217313-51217332 Msa0027010:CDS 40.0%
GCAAAGGTAGAATGGAACTT+TGG - chr1_1:51217488-51217507 None:intergenic 40.0%
AGATAAAGTTCAACCCACCT+AGG - chr1_1:51217510-51217529 None:intergenic 40.0%
! AAAATGCAAGGAGCATGTAG+TGG + chr1_1:51217753-51217772 Msa0027010:CDS 40.0%
GTAAATGCAGCAAGCAACAT+TGG - chr1_1:51218268-51218287 None:intergenic 40.0%
! ATGTTGCTTGCTGCATTTAC+AGG + chr1_1:51218268-51218287 Msa0027010:intron 40.0%
TTGCTGCATTTACAGGTCAA+AGG + chr1_1:51218275-51218294 Msa0027010:intron 40.0%
! CAAAGGTGTGGAACAAGAAT+TGG + chr1_1:51218292-51218311 Msa0027010:CDS 40.0%
!! CAAGAAGAAGCAGCTTTAAG+TGG + chr1_1:51218323-51218342 Msa0027010:CDS 40.0%
!! AGCAGCTTTAAGTGGACAAA+CGG + chr1_1:51218331-51218350 Msa0027010:CDS 40.0%
TTCTGTATGGACATCGTGTT+AGG - chr1_1:51218546-51218565 None:intergenic 40.0%
AACACGATGTCCATACAGAA+AGG + chr1_1:51218546-51218565 Msa0027010:three_prime_UTR 40.0%
TCCATACAGAAAGGTTGCAT+AGG + chr1_1:51218555-51218574 Msa0027010:three_prime_UTR 40.0%
ACCTATGCAACCTTTCTGTA+TGG - chr1_1:51218559-51218578 None:intergenic 40.0%
ATACAGAAAGGTTGCATAGG+TGG + chr1_1:51218558-51218577 Msa0027010:three_prime_UTR 40.0%
TGGTCTTTCCTTCTGAATCA+AGG + chr1_1:51218617-51218636 Msa0027010:three_prime_UTR 40.0%
! AAGGTTACTGAAAAAGTGCG+AGG + chr1_1:51218636-51218655 Msa0027010:three_prime_UTR 40.0%
ACTTGCCTATTGGCATTGTA+TGG + chr1_1:51218666-51218685 Msa0027010:three_prime_UTR 40.0%
! CGCTTTTCTCCATGTTCAAA+TGG + chr1_1:51218726-51218745 Msa0027010:three_prime_UTR 40.0%
CCCATACATCCATTTGAACA+TGG - chr1_1:51218738-51218757 None:intergenic 40.0%
ATGGATGTATGGGCATGTTA+AGG + chr1_1:51218745-51218764 Msa0027010:three_prime_UTR 40.0%
AACGCTAGAATACCTATAGC+AGG - chr1_1:51218818-51218837 None:intergenic 40.0%
TGCTATAGGTATTCTAGCGT+TGG + chr1_1:51218817-51218836 Msa0027010:three_prime_UTR 40.0%
GGAATTAGGGTTCTTCGATG+CGG - chr1_1:51215343-51215362 None:intergenic 45.0%
TATCGCAATTACAACGGCAC+TGG - chr1_1:51215781-51215800 None:intergenic 45.0%
CTTATCCCACTAAGTGGAGT+CGG - chr1_1:51216104-51216123 None:intergenic 45.0%
!!! GAGTTGTTTTGGGTGGATGA+AGG + chr1_1:51216382-51216401 Msa0027010:intron 45.0%
ATGAAGGAAGCTTGAGGGTT+TGG + chr1_1:51216398-51216417 Msa0027010:five_prime_UTR 45.0%
GACTGAACTGTGAAGGATGA+CGG + chr1_1:51216459-51216478 Msa0027010:exon 45.0%
! AGGCGTACTGTTTTCCGATT+AGG + chr1_1:51216487-51216506 Msa0027010:CDS 45.0%
! TTCCATCTCCATTTTCCACC+GGG + chr1_1:51216665-51216684 Msa0027010:CDS 45.0%
AAACATACTCCTCCTTTGCC+CGG - chr1_1:51216686-51216705 None:intergenic 45.0%
!! GATTTGGAGTGGACTGTGTT+TGG - chr1_1:51216711-51216730 None:intergenic 45.0%
AAGAGACTCTGGATTTGGAG+TGG - chr1_1:51216722-51216741 None:intergenic 45.0%
TCATCCTGGTAAACCTGTCA+TGG + chr1_1:51216747-51216766 Msa0027010:CDS 45.0%
ACATCCATGACAGGTTTACC+AGG - chr1_1:51216754-51216773 None:intergenic 45.0%
GGTAAACCTGTCATGGATGT+TGG + chr1_1:51216754-51216773 Msa0027010:CDS 45.0%
GGAACGAGGATTAGGGAAAT+CGG - chr1_1:51216785-51216804 None:intergenic 45.0%
AGCAAGAGGAGAATTCATCG+CGG - chr1_1:51216806-51216825 None:intergenic 45.0%
AATGAAAGGAGTGGAGAGAG+GGG - chr1_1:51216860-51216879 None:intergenic 45.0%
GAAATGAAAGGAGTGGAGAG+AGG - chr1_1:51216862-51216881 None:intergenic 45.0%
CAAATCGGAAGATGCGTCAT+GGG + chr1_1:51216969-51216988 Msa0027010:CDS 45.0%
CAATTCACGATCCAAGTGCT+CGG + chr1_1:51217197-51217216 Msa0027010:intron 45.0%
AATTCACGATCCAAGTGCTC+GGG + chr1_1:51217198-51217217 Msa0027010:intron 45.0%
! CGGGAGTATGAGATTTGTCT+AGG + chr1_1:51217217-51217236 Msa0027010:intron 45.0%
CATCATCCTGTACAGTTGGT+CGG - chr1_1:51217349-51217368 None:intergenic 45.0%
! CAACTGTACAGGATGATGGT+GGG + chr1_1:51217351-51217370 Msa0027010:CDS 45.0%
! AACTGTACAGGATGATGGTG+GGG + chr1_1:51217352-51217371 Msa0027010:CDS 45.0%
GTTCCATTCTACCTTTGCCT+AGG + chr1_1:51217490-51217509 Msa0027010:intron 45.0%
CATTCTACCTTTGCCTAGGT+GGG + chr1_1:51217494-51217513 Msa0027010:intron 45.0%
TCAGAGTCACCGAAGAACTT+GGG - chr1_1:51217782-51217801 None:intergenic 45.0%
TTCAGAGTCACCGAAGAACT+TGG - chr1_1:51217783-51217802 None:intergenic 45.0%
!! TCTTCGGTGACTCTGAAATC+AGG + chr1_1:51217786-51217805 Msa0027010:CDS 45.0%
GCTGATGCATTATGTACCTG+AGG + chr1_1:51217821-51217840 Msa0027010:CDS 45.0%
GCATTTACAGGTCAAAGGTG+TGG + chr1_1:51218280-51218299 Msa0027010:intron 45.0%
CTGAGCTAGTTAGATCTCAC+TGG + chr1_1:51218502-51218521 Msa0027010:intron 45.0%
TGCCTATTGGCATTGTATGG+AGG + chr1_1:51218669-51218688 Msa0027010:three_prime_UTR 45.0%
GCCTATTGGCATTGTATGGA+GGG + chr1_1:51218670-51218689 Msa0027010:three_prime_UTR 45.0%
AACCACGATGTTATCTGGCT+TGG - chr1_1:51218855-51218874 None:intergenic 45.0%
GAGGGGAGTCAAATCACTAG+AGG + chr1_1:51215962-51215981 Msa0027010:intron 50.0%
! ATGTAGCCGACTCCACTTAG+TGG + chr1_1:51216095-51216114 Msa0027010:intron 50.0%
! TGTAGCCGACTCCACTTAGT+GGG + chr1_1:51216096-51216115 Msa0027010:intron 50.0%
GGTGGATGAAGGAAGCTTGA+GGG + chr1_1:51216393-51216412 Msa0027010:five_prime_UTR 50.0%
! TGAACTGTGAAGGATGACGG+TGG + chr1_1:51216462-51216481 Msa0027010:exon 50.0%
GCATTGCGGTTGTAGTTGCA+AGG - chr1_1:51216619-51216638 None:intergenic 50.0%
AGATGGAAATGGTGAGGCAG+AGG - chr1_1:51216653-51216672 None:intergenic 50.0%
TCATCGCGGAACGAGGATTA+GGG - chr1_1:51216792-51216811 None:intergenic 50.0%
TTCATCGCGGAACGAGGATT+AGG - chr1_1:51216793-51216812 None:intergenic 50.0%
ATGAAAGGAGTGGAGAGAGG+GGG - chr1_1:51216859-51216878 None:intergenic 50.0%
CCATGACGCATCTTCCGATT+TGG - chr1_1:51216971-51216990 None:intergenic 50.0%
CCAAATCGGAAGATGCGTCA+TGG + chr1_1:51216968-51216987 Msa0027010:CDS 50.0%
GCTTGGGAGTCTAGAAAGAG+TGG - chr1_1:51217051-51217070 None:intergenic 50.0%
CGAGCACTTGGATCGTGAAT+TGG - chr1_1:51217199-51217218 None:intergenic 50.0%
ATCTCATACTCCCGAGCACT+TGG - chr1_1:51217211-51217230 None:intergenic 50.0%
TCGTATCCGACCAACTGTAC+AGG + chr1_1:51217340-51217359 Msa0027010:CDS 50.0%
CGACCAACTGTACAGGATGA+TGG + chr1_1:51217347-51217366 Msa0027010:CDS 50.0%
CCACCATCATCCTGTACAGT+TGG - chr1_1:51217353-51217372 None:intergenic 50.0%
! CCAACTGTACAGGATGATGG+TGG + chr1_1:51217350-51217369 Msa0027010:CDS 50.0%
GGTGGGGACATTGTGTATTG+TGG + chr1_1:51217368-51217387 Msa0027010:CDS 50.0%
CCACCTAGGCAAAGGTAGAA+TGG - chr1_1:51217496-51217515 None:intergenic 50.0%
CCATTCTACCTTTGCCTAGG+TGG + chr1_1:51217493-51217512 Msa0027010:intron 50.0%
AGTTCAACCCACCTAGGCAA+AGG - chr1_1:51217504-51217523 None:intergenic 50.0%
TAGTGGCTGCCCAAGTTCTT+CGG + chr1_1:51217770-51217789 Msa0027010:CDS 50.0%
GCCCTCCATACAATGCCAAT+AGG - chr1_1:51218674-51218693 None:intergenic 50.0%
CTCCAAGCCAGATAACATCG+TGG + chr1_1:51218850-51218869 Msa0027010:three_prime_UTR 50.0%
ATTGCATGACACGGCCAGTT+TGG - chr1_1:51218890-51218909 None:intergenic 50.0%
ACTGGCCGTGTCATGCAATA+AGG + chr1_1:51218891-51218910 Msa0027010:three_prime_UTR 50.0%
ATGCACTGCAACCGCAACTG+CGG - chr1_1:51215739-51215758 None:intergenic 55.0%
GGGTGGATGAAGGAAGCTTG+AGG + chr1_1:51216392-51216411 Msa0027010:five_prime_UTR 55.0%
! GAAGCTTGAGGGTTTGGAGC+AGG + chr1_1:51216404-51216423 Msa0027010:five_prime_UTR 55.0%
! TGTGAAGGATGACGGTGGTG+AGG + chr1_1:51216467-51216486 Msa0027010:exon 55.0%
TGCCCGGTGGAAAATGGAGA+TGG - chr1_1:51216670-51216689 None:intergenic 55.0%
! CTCCATTTTCCACCGGGCAA+AGG + chr1_1:51216671-51216690 Msa0027010:CDS 55.0%
CTCCTTTGCCCGGTGGAAAA+TGG - chr1_1:51216676-51216695 None:intergenic 55.0%
! CATTTTCCACCGGGCAAAGG+AGG + chr1_1:51216674-51216693 Msa0027010:CDS 55.0%
GCGCTACCAACATCCATGAC+AGG - chr1_1:51216763-51216782 None:intergenic 55.0%
GGAGAATTCATCGCGGAACG+AGG - chr1_1:51216799-51216818 None:intergenic 55.0%
TGAAAGGAGTGGAGAGAGGG+GGG - chr1_1:51216858-51216877 None:intergenic 55.0%
! GTCTTTGGAAGCGGCAGCTT+GGG - chr1_1:51217067-51217086 None:intergenic 55.0%
! TGTCTTTGGAAGCGGCAGCT+TGG - chr1_1:51217068-51217087 None:intergenic 55.0%
GTGGTACCCTCTATCTGCCT+GGG + chr1_1:51218577-51218596 Msa0027010:three_prime_UTR 55.0%
TAGCAGCCCAGGCAGATAGA+GGG - chr1_1:51218586-51218605 None:intergenic 55.0%
ATAGCAGCCCAGGCAGATAG+AGG - chr1_1:51218587-51218606 None:intergenic 55.0%
TCTATCTGCCTGGGCTGCTA+TGG + chr1_1:51218586-51218605 Msa0027010:three_prime_UTR 55.0%
GCAGAATGCAGCCGCAGTTG+CGG + chr1_1:51215725-51215744 Msa0027010:intron 60.0%
! GCTTGAGGGTTTGGAGCAGG+AGG + chr1_1:51216407-51216426 Msa0027010:five_prime_UTR 60.0%
CATACTCCTCCTTTGCCCGG+TGG - chr1_1:51216683-51216702 None:intergenic 60.0%
GAAAGGAGTGGAGAGAGGGG+GGG - chr1_1:51216857-51216876 None:intergenic 60.0%
GGTGGTACCCTCTATCTGCC+TGG + chr1_1:51218576-51218595 Msa0027010:three_prime_UTR 60.0%
TCTGCCTGGGCTGCTATGGA+TGG + chr1_1:51218590-51218609 Msa0027010:three_prime_UTR 60.0%
AGAGCCATCCATAGCAGCCC+AGG - chr1_1:51218597-51218616 None:intergenic 60.0%
GGGCTGCTATGGATGGCTCT+TGG + chr1_1:51218597-51218616 Msa0027010:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 51215213 51218962 51215213 ID=Msa0027010;Name=Msa0027010
chr1_1 mRNA 51215213 51218962 51215213 ID=Msa0027010-mRNA-1;Parent=Msa0027010;Name=Msa0027010-mRNA-1;_AED=0.15;_eAED=0.15;_QI=308|0.83|0.85|1|0.66|0.42|7|578|288
chr1_1 exon 51215213 51215428 51215213 ID=Msa0027010-mRNA-1:exon:14923;Parent=Msa0027010-mRNA-1
chr1_1 exon 51216383 51216847 51216383 ID=Msa0027010-mRNA-1:exon:14924;Parent=Msa0027010-mRNA-1
chr1_1 exon 51216926 51217134 51216926 ID=Msa0027010-mRNA-1:exon:14925;Parent=Msa0027010-mRNA-1
chr1_1 exon 51217296 51217399 51217296 ID=Msa0027010-mRNA-1:exon:14926;Parent=Msa0027010-mRNA-1
chr1_1 exon 51217731 51217842 51217731 ID=Msa0027010-mRNA-1:exon:14927;Parent=Msa0027010-mRNA-1
chr1_1 exon 51218290 51218514 51218290 ID=Msa0027010-mRNA-1:exon:14928;Parent=Msa0027010-mRNA-1
chr1_1 exon 51218541 51218962 51218541 ID=Msa0027010-mRNA-1:exon:14929;Parent=Msa0027010-mRNA-1
chr1_1 five_prime_UTR 51215213 51215428 51215213 ID=Msa0027010-mRNA-1:five_prime_utr;Parent=Msa0027010-mRNA-1
chr1_1 five_prime_UTR 51216383 51216474 51216383 ID=Msa0027010-mRNA-1:five_prime_utr;Parent=Msa0027010-mRNA-1
chr1_1 CDS 51216475 51216847 51216475 ID=Msa0027010-mRNA-1:cds;Parent=Msa0027010-mRNA-1
chr1_1 CDS 51216926 51217134 51216926 ID=Msa0027010-mRNA-1:cds;Parent=Msa0027010-mRNA-1
chr1_1 CDS 51217296 51217399 51217296 ID=Msa0027010-mRNA-1:cds;Parent=Msa0027010-mRNA-1
chr1_1 CDS 51217731 51217842 51217731 ID=Msa0027010-mRNA-1:cds;Parent=Msa0027010-mRNA-1
chr1_1 CDS 51218290 51218358 51218290 ID=Msa0027010-mRNA-1:cds;Parent=Msa0027010-mRNA-1
chr1_1 three_prime_UTR 51218359 51218514 51218359 ID=Msa0027010-mRNA-1:three_prime_utr;Parent=Msa0027010-mRNA-1
chr1_1 three_prime_UTR 51218541 51218962 51218541 ID=Msa0027010-mRNA-1:three_prime_utr;Parent=Msa0027010-mRNA-1
Gene Sequence

>Msa0027010

ATGACGGTGGTGAGGCGTACTGTTTTCCGATTAGGAAAACGATTACGACTAGGACTCTTCAATTCCCTCAAATCAGAGACTAATCACAATGATCTAAATACAAATTGTTTTCGCTGTCTGGGTGCAACGCCATCGTTTCAACCTTGCAACTACAACCGCAATGCTTTTTTCTCTTCCTCTGCCTCACCATTTCCATCTCCATTTTCCACCGGGCAAAGGAGGAGTATGTTTATCCAAACACAGTCCACTCCAAATCCAGAGTCTCTTATGTTTCATCCTGGTAAACCTGTCATGGATGTTGGTAGCGCCGATTTCCCTAATCCTCGTTCCGCGATGAATTCTCCTCTTGCTAAATCAATTTTTGCTATTGATGGAATCACTCGTGTTTTCTTTGGATCTGATTTTGTCACTGTTACCAAATCGGAAGATGCGTCATGGGAATTCCTTAAGCCTGAAATCTTTGCTGCTATTATGGATTTCTACTCTTCAGGTGAACCACTCTTTCTAGACTCCCAAGCTGCCGCTTCCAAAGACACAGCAATTCACGATGTAAGTTTTTCTCATTTCTATGCTGATATTGCTGATGATTCTGAAACAGTTGCGATGATCAAGGAACTTTTGGAGACTCGTATCCGACCAACTGTACAGGATGATGGTGGGGACATTGTGTATTGTGGTTTTGATCCAGATACGGGGATCGTCAAACTCAAAATGCAAGGAGCATGTAGTGGCTGCCCAAGTTCTTCGGTGACTCTGAAATCAGGCATTGAGAATATGCTGATGCATTATGTACCTGAGGTCAAAGGTGTGGAACAAGAATTGGATGCTGAGCAAGAAGAAGCAGCTTTAAGTGGACAAACGGAGTAG
Protein sequence

>Msa0027010

MTVVRRTVFRLGKRLRLGLFNSLKSETNHNDLNTNCFRCLGATPSFQPCNYNRNAFFSSSASPFPSPFSTGQRRSMFIQTQSTPNPESLMFHPGKPVMDVGSADFPNPRSAMNSPLAKSIFAIDGITRVFFGSDFVTVTKSEDASWEFLKPEIFAAIMDFYSSGEPLFLDSQAAASKDTAIHDVSFSHFYADIADDSETVAMIKELLETRIRPTVQDDGGDIVYCGFDPDTGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDAEQEEAALSGQTE*