Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1394730 | KEH25024.1 | 78.488 | 172 | 23 | 1 | 82 | 253 | 55 | 212 | 1.89e-90 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1394730 | A0A072U5J3 | 78.488 | 172 | 23 | 1 | 82 | 253 | 55 | 212 | 9.01e-91 | 276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1394730 | 0.811394 | 7.155983e-51 | -8.615850e-47 |
| Msa0011660 | Msa1394730 | -0.824629 | 7.276100e-54 | -8.615850e-47 |
| Msa0015390 | Msa1394730 | 0.819030 | 1.438433e-52 | -8.615850e-47 |
| Msa0017510 | Msa1394730 | 0.810673 | 1.025535e-50 | -8.615850e-47 |
| Msa0020410 | Msa1394730 | 0.809974 | 1.450919e-50 | -8.615850e-47 |
| Msa0026910 | Msa1394730 | 0.808913 | 2.451460e-50 | -8.615850e-47 |
| Msa0027010 | Msa1394730 | 0.806975 | 6.335083e-50 | -8.615850e-47 |
| Msa0037880 | Msa1394730 | 0.816113 | 6.537227e-52 | -8.615850e-47 |
| Msa0050390 | Msa1394730 | 0.803562 | 3.285220e-49 | -8.615850e-47 |
| Msa0052730 | Msa1394730 | 0.804085 | 2.558278e-49 | -8.615850e-47 |
| Msa0081230 | Msa1394730 | 0.803022 | 4.250314e-49 | -8.615850e-47 |
| Msa0084940 | Msa1394730 | 0.817606 | 3.022568e-52 | -8.615850e-47 |
| Msa0092990 | Msa1394730 | 0.814474 | 1.512994e-51 | -8.615850e-47 |
| Msa0100000 | Msa1394730 | 0.836992 | 6.758792e-57 | -8.615850e-47 |
| Msa0105070 | Msa1394730 | 0.812525 | 4.057668e-51 | -8.615850e-47 |
| Msa0109900 | Msa1394730 | 0.805110 | 1.563345e-49 | -8.615850e-47 |
| Msa0115270 | Msa1394730 | 0.813875 | 2.050615e-51 | -8.615850e-47 |
| Msa0120340 | Msa1394730 | 0.803722 | 3.043853e-49 | -8.615850e-47 |
| Msa1345220 | Msa1394730 | 0.804398 | 2.201731e-49 | -8.615850e-47 |
| Msa1346370 | Msa1394730 | 0.818328 | 2.075503e-52 | -8.615850e-47 |
| Msa1348950 | Msa1394730 | 0.809528 | 1.809936e-50 | -8.615850e-47 |
| Msa1353470 | Msa1394730 | 0.838729 | 2.418901e-57 | -8.615850e-47 |
| Msa1359040 | Msa1394730 | 0.812411 | 4.298337e-51 | -8.615850e-47 |
| Msa1362880 | Msa1394730 | 0.825174 | 5.412554e-54 | -8.615850e-47 |
| Msa1365600 | Msa1394730 | 0.806760 | 7.035014e-50 | -8.615850e-47 |
| Msa1369530 | Msa1394730 | 0.800378 | 1.482197e-48 | -8.615850e-47 |
| Msa1394500 | Msa1394730 | 0.832973 | 6.964415e-56 | -8.615850e-47 |
| Msa1394730 | Msa1397860 | 0.807530 | 4.832369e-50 | -8.615850e-47 |
| Msa1394730 | Msa1408010 | 0.832384 | 9.750442e-56 | -8.615850e-47 |
| Msa1394730 | Msa1416390 | 0.821532 | 3.841408e-53 | -8.615850e-47 |
| Msa1394730 | Msa1423870 | 0.825047 | 5.798799e-54 | -8.615850e-47 |
| Msa1394730 | Msa1423880 | 0.802015 | 6.855412e-49 | -8.615850e-47 |
| Msa1394730 | Msa1427230 | 0.801008 | 1.102556e-48 | -8.615850e-47 |
| Msa1394730 | Msa1441190 | 0.811889 | 5.584608e-51 | -8.615850e-47 |
| Msa1394730 | Msa1448640 | 0.801468 | 8.879256e-49 | -8.615850e-47 |
| Msa1394730 | Msa1451620 | -0.806250 | 9.010118e-50 | -8.615850e-47 |
| Msa1394730 | Msa1461300 | 0.808949 | 2.409133e-50 | -8.615850e-47 |
| Msa0610430 | Msa1394730 | 0.816470 | 5.440361e-52 | -8.615850e-47 |
| Msa0616020 | Msa1394730 | 0.817791 | 2.746027e-52 | -8.615850e-47 |
| Msa0633400 | Msa1394730 | 0.804127 | 2.508136e-49 | -8.615850e-47 |
| Msa0638070 | Msa1394730 | 0.829735 | 4.358808e-55 | -8.615850e-47 |
| Msa0638610 | Msa1394730 | 0.803780 | 2.961096e-49 | -8.615850e-47 |
| Msa0639310 | Msa1394730 | 0.807729 | 4.383521e-50 | -8.615850e-47 |
| Msa0641670 | Msa1394730 | 0.805260 | 1.454869e-49 | -8.615850e-47 |
| Msa0656530 | Msa1394730 | 0.807814 | 4.205018e-50 | -8.615850e-47 |
| Msa0657580 | Msa1394730 | 0.836020 | 1.195010e-56 | -8.615850e-47 |
| Msa0657750 | Msa1394730 | 0.810200 | 1.297250e-50 | -8.615850e-47 |
| Msa0663380 | Msa1394730 | 0.812846 | 3.451481e-51 | -8.615850e-47 |
| Msa0663920 | Msa1394730 | 0.805285 | 1.437504e-49 | -8.615850e-47 |
| Msa0680240 | Msa1394730 | 0.805455 | 1.324150e-49 | -8.615850e-47 |
| Msa0681800 | Msa1394730 | 0.821504 | 3.899236e-53 | -8.615850e-47 |
| Msa0701010 | Msa1394730 | 0.823580 | 1.282807e-53 | -8.615850e-47 |
| Msa0713820 | Msa1394730 | 0.817289 | 3.563236e-52 | -8.615850e-47 |
| Msa0715470 | Msa1394730 | 0.810273 | 1.251049e-50 | -8.615850e-47 |
| Msa0731940 | Msa1394730 | 0.816407 | 5.617685e-52 | -8.615850e-47 |
| Msa0735170 | Msa1394730 | 0.825147 | 5.491322e-54 | -8.615850e-47 |
| Msa0743720 | Msa1394730 | 0.800789 | 1.222088e-48 | -8.615850e-47 |
| Msa0745790 | Msa1394730 | 0.818060 | 2.387519e-52 | -8.615850e-47 |
| Msa0748730 | Msa1394730 | 0.805677 | 1.189606e-49 | -8.615850e-47 |
| Msa0749290 | Msa1394730 | 0.810077 | 1.379000e-50 | -8.615850e-47 |
| Msa0756060 | Msa1394730 | 0.824053 | 9.942807e-54 | -8.615850e-47 |
| Msa0767220 | Msa1394730 | 0.804450 | 2.147884e-49 | -8.615850e-47 |
| Msa0768290 | Msa1394730 | 0.802018 | 6.844905e-49 | -8.615850e-47 |
| Msa0771720 | Msa1394730 | 0.812877 | 3.398611e-51 | -8.615850e-47 |
| Msa0777230 | Msa1394730 | 0.823924 | 1.066069e-53 | -8.615850e-47 |
| Msa0777570 | Msa1394730 | -0.817092 | 3.945174e-52 | -8.615850e-47 |
| Msa0790660 | Msa1394730 | -0.809221 | 2.106504e-50 | -8.615850e-47 |
| Msa0794510 | Msa1394730 | -0.824020 | 1.012105e-53 | -8.615850e-47 |
| Msa0808080 | Msa1394730 | 0.816232 | 6.149086e-52 | -8.615850e-47 |
| Msa0810220 | Msa1394730 | 0.806969 | 6.353797e-50 | -8.615850e-47 |
| Msa0827040 | Msa1394730 | 0.802854 | 4.604909e-49 | -8.615850e-47 |
| Msa0828920 | Msa1394730 | 0.804112 | 2.526023e-49 | -8.615850e-47 |
| Msa0831870 | Msa1394730 | 0.810543 | 1.093950e-50 | -8.615850e-47 |
| Msa0122590 | Msa1394730 | 0.816808 | 4.569733e-52 | -8.615850e-47 |
| Msa0140300 | Msa1394730 | 0.816499 | 5.357836e-52 | -8.615850e-47 |
| Msa0141620 | Msa1394730 | 0.827991 | 1.151904e-54 | -8.615850e-47 |
| Msa0147250 | Msa1394730 | 0.801345 | 9.407409e-49 | -8.615850e-47 |
| Msa0150800 | Msa1394730 | 0.821626 | 3.652994e-53 | -8.615850e-47 |
| Msa0150840 | Msa1394730 | 0.804457 | 2.140511e-49 | -8.615850e-47 |
| Msa0157100 | Msa1394730 | 0.815733 | 7.948560e-52 | -8.615850e-47 |
| Msa0157290 | Msa1394730 | 0.810374 | 1.190098e-50 | -8.615850e-47 |
| Msa0165210 | Msa1394730 | 0.816628 | 5.014724e-52 | -8.615850e-47 |
| Msa0166560 | Msa1394730 | 0.801863 | 7.368106e-49 | -8.615850e-47 |
| Msa0166870 | Msa1394730 | 0.804016 | 2.644955e-49 | -8.615850e-47 |
| Msa0178960 | Msa1394730 | 0.831116 | 2.002586e-55 | -8.615850e-47 |
| Msa0178970 | Msa1394730 | 0.816520 | 5.302101e-52 | -8.615850e-47 |
| Msa0180500 | Msa1394730 | 0.805717 | 1.166581e-49 | -8.615850e-47 |
| Msa0197780 | Msa1394730 | 0.815118 | 1.089204e-51 | -8.615850e-47 |
| Msa0205510 | Msa1394730 | 0.804545 | 2.051551e-49 | -8.615850e-47 |
| Msa0208090 | Msa1394730 | 0.805447 | 1.328794e-49 | -8.615850e-47 |
| Msa0215320 | Msa1394730 | -0.820593 | 6.319890e-53 | -8.615850e-47 |
| Msa0228070 | Msa1394730 | 0.818669 | 1.737631e-52 | -8.615850e-47 |
| Msa0231880 | Msa1394730 | 0.807343 | 5.295736e-50 | -8.615850e-47 |
| Msa1228590 | Msa1394730 | 0.802408 | 5.689451e-49 | -8.615850e-47 |
| Msa1233890 | Msa1394730 | 0.827306 | 1.683058e-54 | -8.615850e-47 |
| Msa1235740 | Msa1394730 | 0.826046 | 3.362431e-54 | -8.615850e-47 |
| Msa1237980 | Msa1394730 | 0.807447 | 5.031227e-50 | -8.615850e-47 |
| Msa1238930 | Msa1394730 | 0.812606 | 3.895086e-51 | -8.615850e-47 |
| Msa1253020 | Msa1394730 | 0.811362 | 7.270506e-51 | -8.615850e-47 |
| Msa1255080 | Msa1394730 | 0.807574 | 4.730092e-50 | -8.615850e-47 |
| Msa1255190 | Msa1394730 | 0.802386 | 5.751050e-49 | -8.615850e-47 |
| Msa1277660 | Msa1394730 | 0.802295 | 6.003502e-49 | -8.615850e-47 |
| Msa1281510 | Msa1394730 | 0.825655 | 4.163441e-54 | -8.615850e-47 |
| Msa1284680 | Msa1394730 | 0.811861 | 5.664919e-51 | -8.615850e-47 |
| Msa1286800 | Msa1394730 | 0.804167 | 2.459858e-49 | -8.615850e-47 |
| Msa1299290 | Msa1394730 | -0.814594 | 1.422850e-51 | -8.615850e-47 |
| Msa1313140 | Msa1394730 | 0.825906 | 3.631323e-54 | -8.615850e-47 |
| Msa1314340 | Msa1394730 | 0.815437 | 9.250333e-52 | -8.615850e-47 |
| Msa1336710 | Msa1394730 | 0.808320 | 3.282009e-50 | -8.615850e-47 |
| Msa0369050 | Msa1394730 | 0.808050 | 3.746907e-50 | -8.615850e-47 |
| Msa0376310 | Msa1394730 | 0.800896 | 1.162095e-48 | -8.615850e-47 |
| Msa0388950 | Msa1394730 | 0.826263 | 2.985808e-54 | -8.615850e-47 |
| Msa0395790 | Msa1394730 | 0.811634 | 6.347815e-51 | -8.615850e-47 |
| Msa0395820 | Msa1394730 | 0.801777 | 7.670366e-49 | -8.615850e-47 |
| Msa0402290 | Msa1394730 | 0.819419 | 1.173223e-52 | -8.615850e-47 |
| Msa0402790 | Msa1394730 | 0.806442 | 8.207960e-50 | -8.615850e-47 |
| Msa0405370 | Msa1394730 | 0.808011 | 3.818677e-50 | -8.615850e-47 |
| Msa0406880 | Msa1394730 | 0.833255 | 5.924214e-56 | -8.615850e-47 |
| Msa0416300 | Msa1394730 | 0.821163 | 4.671274e-53 | -8.615850e-47 |
| Msa0424320 | Msa1394730 | 0.810787 | 9.690055e-51 | -8.615850e-47 |
| Msa0438200 | Msa1394730 | 0.994364 | 1.191817e-206 | -8.615850e-47 |
| Msa0453200 | Msa1394730 | 0.804646 | 1.955234e-49 | -8.615850e-47 |
| Msa0466390 | Msa1394730 | 0.827030 | 1.959084e-54 | -8.615850e-47 |
| Msa0980880 | Msa1394730 | 0.805016 | 1.636247e-49 | -8.615850e-47 |
| Msa0998690 | Msa1394730 | 0.809425 | 1.904698e-50 | -8.615850e-47 |
| Msa0999100 | Msa1394730 | 0.827241 | 1.744209e-54 | -8.615850e-47 |
| Msa1014540 | Msa1394730 | 0.815073 | 1.114576e-51 | -8.615850e-47 |
| Msa1039880 | Msa1394730 | 0.816550 | 5.218934e-52 | -8.615850e-47 |
| Msa1040400 | Msa1394730 | 0.803625 | 3.187656e-49 | -8.615850e-47 |
| Msa1046300 | Msa1394730 | 0.817277 | 3.584247e-52 | -8.615850e-47 |
| Msa1063510 | Msa1394730 | 0.804586 | 2.012133e-49 | -8.615850e-47 |
| Msa1075220 | Msa1394730 | -0.801989 | 6.941717e-49 | -8.615850e-47 |
| Msa1082500 | Msa1394730 | 0.800706 | 1.270656e-48 | -8.615850e-47 |
| Msa1082580 | Msa1394730 | 0.826027 | 3.398255e-54 | -8.615850e-47 |
| Msa1091830 | Msa1394730 | 0.805962 | 1.036110e-49 | -8.615850e-47 |
| Msa1100050 | Msa1394730 | 0.811588 | 6.493904e-51 | -8.615850e-47 |
| Msa0241190 | Msa1394730 | 0.809438 | 1.891811e-50 | -8.615850e-47 |
| Msa0245940 | Msa1394730 | 0.801879 | 7.311168e-49 | -8.615850e-47 |
| Msa0255080 | Msa1394730 | 0.805069 | 1.594736e-49 | -8.615850e-47 |
| Msa0257460 | Msa1394730 | 0.816978 | 4.184428e-52 | -8.615850e-47 |
| Msa0259370 | Msa1394730 | 0.819543 | 1.099035e-52 | -8.615850e-47 |
| Msa0264150 | Msa1394730 | 0.804308 | 2.299529e-49 | -8.615850e-47 |
| Msa0269450 | Msa1394730 | 0.802772 | 4.787447e-49 | -8.615850e-47 |
| Msa0271530 | Msa1394730 | 0.808515 | 2.981485e-50 | -8.615850e-47 |
| Msa0275000 | Msa1394730 | 0.842467 | 2.540302e-58 | -8.615850e-47 |
| Msa0279790 | Msa1394730 | 0.822596 | 2.176744e-53 | -8.615850e-47 |
| Msa0282250 | Msa1394730 | 0.803678 | 3.108849e-49 | -8.615850e-47 |
| Msa0288100 | Msa1394730 | 0.809645 | 1.707858e-50 | -8.615850e-47 |
| Msa0291500 | Msa1394730 | 0.803104 | 4.087883e-49 | -8.615850e-47 |
| Msa0294560 | Msa1394730 | -0.801675 | 8.050255e-49 | -8.615850e-47 |
| Msa0298700 | Msa1394730 | 0.802301 | 5.986365e-49 | -8.615850e-47 |
| Msa0319170 | Msa1394730 | 0.819977 | 8.745228e-53 | -8.615850e-47 |
| Msa0321310 | Msa1394730 | 0.834524 | 2.851239e-56 | -8.615850e-47 |
| Msa0323080 | Msa1394730 | 0.805998 | 1.018056e-49 | -8.615850e-47 |
| Msa0329350 | Msa1394730 | 0.804202 | 2.418911e-49 | -8.615850e-47 |
| Msa0330340 | Msa1394730 | 0.800967 | 1.124307e-48 | -8.615850e-47 |
| Msa0336040 | Msa1394730 | -0.801126 | 1.043111e-48 | -8.615850e-47 |
| Msa0339250 | Msa1394730 | 0.800129 | 1.665742e-48 | -8.615850e-47 |
| Msa0342100 | Msa1394730 | 0.847586 | 1.052758e-59 | -8.615850e-47 |
| Msa0350990 | Msa1394730 | 0.846808 | 1.721193e-59 | -8.615850e-47 |
| Msa0351030 | Msa1394730 | 0.846922 | 1.601985e-59 | -8.615850e-47 |
| Msa0351080 | Msa1394730 | 0.802443 | 5.596650e-49 | -8.615850e-47 |
| Msa0351100 | Msa1394730 | 0.843613 | 1.257833e-58 | -8.615850e-47 |
| Msa0351810 | Msa1394730 | 0.831085 | 2.038718e-55 | -8.615850e-47 |
| Msa0355220 | Msa1394730 | 0.817912 | 2.578081e-52 | -8.615850e-47 |
| Msa0359030 | Msa1394730 | 0.837340 | 5.506343e-57 | -8.615850e-47 |
| Msa1109680 | Msa1394730 | 0.824049 | 9.963936e-54 | -8.615850e-47 |
| Msa1113170 | Msa1394730 | 0.801780 | 7.661499e-49 | -8.615850e-47 |
| Msa1119480 | Msa1394730 | 0.827712 | 1.344327e-54 | -8.615850e-47 |
| Msa1131940 | Msa1394730 | -0.814487 | 1.502596e-51 | -8.615850e-47 |
| Msa1135470 | Msa1394730 | 0.817483 | 3.222187e-52 | -8.615850e-47 |
| Msa1137570 | Msa1394730 | 0.822193 | 2.700708e-53 | -8.615850e-47 |
| Msa1147900 | Msa1394730 | 0.815660 | 8.251744e-52 | -8.615850e-47 |
| Msa1147970 | Msa1394730 | 0.806924 | 6.495782e-50 | -8.615850e-47 |
| Msa1154280 | Msa1394730 | 0.812244 | 4.672980e-51 | -8.615850e-47 |
| Msa1156020 | Msa1394730 | 0.813557 | 2.410098e-51 | -8.615850e-47 |
| Msa1162550 | Msa1394730 | -0.812630 | 3.848592e-51 | -8.615850e-47 |
| Msa1174040 | Msa1394730 | 0.822129 | 2.793614e-53 | -8.615850e-47 |
| Msa1179460 | Msa1394730 | 0.816404 | 5.628704e-52 | -8.615850e-47 |
| Msa1193290 | Msa1394730 | 0.834939 | 2.241806e-56 | -8.615850e-47 |
| Msa1201120 | Msa1394730 | 0.813672 | 2.273883e-51 | -8.615850e-47 |
| Msa1211140 | Msa1394730 | -0.817604 | 3.025755e-52 | -8.615850e-47 |
| Msa1215920 | Msa1394730 | 0.804427 | 2.171619e-49 | -8.615850e-47 |
| Msa1217860 | Msa1394730 | 0.802892 | 4.522071e-49 | -8.615850e-47 |
| Msa0484780 | Msa1394730 | 0.805712 | 1.169547e-49 | -8.615850e-47 |
| Msa0489100 | Msa1394730 | 0.803142 | 4.013452e-49 | -8.615850e-47 |
| Msa0495330 | Msa1394730 | 0.811876 | 5.621033e-51 | -8.615850e-47 |
| Msa0498650 | Msa1394730 | 0.819753 | 9.843915e-53 | -8.615850e-47 |
| Msa0512750 | Msa1394730 | 0.809177 | 2.152116e-50 | -8.615850e-47 |
| Msa0517110 | Msa1394730 | 0.802291 | 6.015562e-49 | -8.615850e-47 |
| Msa0519000 | Msa1394730 | 0.837075 | 6.436680e-57 | -8.615850e-47 |
| Msa0523940 | Msa1394730 | 0.808510 | 2.989150e-50 | -8.615850e-47 |
| Msa0529040 | Msa1394730 | 0.808937 | 2.423247e-50 | -8.615850e-47 |
| Msa0562440 | Msa1394730 | 0.821260 | 4.438866e-53 | -8.615850e-47 |
| Msa0568820 | Msa1394730 | 0.804991 | 1.656298e-49 | -8.615850e-47 |
| Msa0585230 | Msa1394730 | 0.805009 | 1.641461e-49 | -8.615850e-47 |
| Msa0592440 | Msa1394730 | 0.826629 | 2.442691e-54 | -8.615850e-47 |
| Msa0593650 | Msa1394730 | 0.803602 | 3.223147e-49 | -8.615850e-47 |
| Msa0849030 | Msa1394730 | 0.838862 | 2.235047e-57 | -8.615850e-47 |
| Msa0850960 | Msa1394730 | 0.807951 | 3.932834e-50 | -8.615850e-47 |
| Msa0861540 | Msa1394730 | 0.809008 | 2.339593e-50 | -8.615850e-47 |
| Msa0868700 | Msa1394730 | 0.825073 | 5.718037e-54 | -8.615850e-47 |
| Msa0875620 | Msa1394730 | 0.808553 | 2.926357e-50 | -8.615850e-47 |
| Msa0876200 | Msa1394730 | 0.811954 | 5.407049e-51 | -8.615850e-47 |
| Msa0876580 | Msa1394730 | 0.831987 | 1.221952e-55 | -8.615850e-47 |
| Msa0877250 | Msa1394730 | 0.803357 | 3.623723e-49 | -8.615850e-47 |
| Msa0880140 | Msa1394730 | 0.805542 | 1.269472e-49 | -8.615850e-47 |
| Msa0896220 | Msa1394730 | 0.807238 | 5.571966e-50 | -8.615850e-47 |
| Msa0897330 | Msa1394730 | 0.800632 | 1.315491e-48 | -8.615850e-47 |
| Msa0898670 | Msa1394730 | 0.828247 | 9.995823e-55 | -8.615850e-47 |
| Msa0903620 | Msa1394730 | 0.829034 | 6.450396e-55 | -8.615850e-47 |
| Msa0907070 | Msa1394730 | 0.812634 | 3.841997e-51 | -8.615850e-47 |
| Msa0921330 | Msa1394730 | 0.816187 | 6.293115e-52 | -8.615850e-47 |
| Msa0930460 | Msa1394730 | -0.808100 | 3.655659e-50 | -8.615850e-47 |
| Msa0933100 | Msa1394730 | 0.825650 | 4.176340e-54 | -8.615850e-47 |
| Msa0934890 | Msa1394730 | 0.807272 | 5.481560e-50 | -8.615850e-47 |
| Msa0936300 | Msa1394730 | 0.860018 | 2.767000e-63 | -8.615850e-47 |
| Msa0938220 | Msa1394730 | 0.801806 | 7.566708e-49 | -8.615850e-47 |
| Msa0969520 | Msa1394730 | 0.836559 | 8.719247e-57 | -8.615850e-47 |
| Msa0970420 | Msa1394730 | 0.813166 | 2.937737e-51 | -8.615850e-47 |
| Msa0973100 | Msa1394730 | 0.848244 | 6.934819e-60 | -8.615850e-47 |
| Msa0974070 | Msa1394730 | 0.816639 | 4.986094e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1394730 | MtrunA17_Chr6g0468681 | 45.545 | 101 | 37 | 2 | 6 | 90 | 1 | 99 | 1.23e-19 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 51 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAAGAGAGATTTGATTTA+TGG | 0.116291 | tig0021888:-43182 | Msa1394730:CDS |
| TCGTCATTGGAACATGTTTC+TGG | 0.158342 | tig0021888:+43360 | None:intergenic |
| CTGCACTCAGATGTAATTCT+TGG | 0.261752 | tig0021888:-42634 | Msa1394730:three_prime_UTR |
| AAATCGCCAAACATCATTAA+AGG | 0.271490 | tig0021888:+43123 | None:intergenic |
| TCTTGACGTGTCTTTCCTAT+TGG | 0.326012 | tig0021888:-43223 | Msa1394730:CDS |
| TCAACACCTTTAATGATGTT+TGG | 0.344659 | tig0021888:-43129 | Msa1394730:CDS |
| TACACCTATGAGCAACCTTA+TGG | 0.346601 | tig0021888:+43487 | None:intergenic |
| TCATTACCCTTTAGTTCTTC+CGG | 0.360197 | tig0021888:+43084 | None:intergenic |
| AACAAATAAGAGATACATCT+TGG | 0.380955 | tig0021888:-43271 | Msa1394730:CDS |
| TTGACCAAGCCCAACACAAT+TGG | 0.391633 | tig0021888:+43462 | None:intergenic |
| CGCCCTCTATTAGTTCAATC+TGG | 0.398255 | tig0021888:-42853 | Msa1394730:CDS |
| CCTTGTGGAGCTTCCGTTGT+TGG | 0.424252 | tig0021888:-43010 | Msa1394730:CDS |
| GACAGGGATTGGTATTCTCT+TGG | 0.442717 | tig0021888:-43326 | Msa1394730:CDS |
| GAACCAGATTGAACTAATAG+AGG | 0.449982 | tig0021888:+42850 | None:intergenic |
| GTAGGAGGGATTACTGAGTT+AGG | 0.459744 | tig0021888:-43525 | Msa1394730:CDS |
| TAATCCAATTGTGTTGGGCT+TGG | 0.460396 | tig0021888:-43466 | Msa1394730:CDS |
| TTTGGAACCGGAAGAACTAA+AGG | 0.463362 | tig0021888:-43091 | Msa1394730:CDS |
| AGGTGTAATCCAATTGTGTT+GGG | 0.478595 | tig0021888:-43471 | Msa1394730:CDS |
| AACTCGGTGCATGAACCAAT+AGG | 0.486014 | tig0021888:+43208 | None:intergenic |
| AGGAGGAGAACAATGTAAGC+TGG | 0.493023 | tig0021888:-43392 | Msa1394730:CDS |
| TTGGAACCGGAAGAACTAAA+GGG | 0.493607 | tig0021888:-43090 | Msa1394730:CDS |
| AAGAGATACATCTTGGTTGA+AGG | 0.497593 | tig0021888:-43264 | Msa1394730:CDS |
| GAAGGAAAATTGATTCAAGA+AGG | 0.514667 | tig0021888:-43246 | Msa1394730:CDS |
| GGAATGGCTAGAGCATTTCA+AGG | 0.514887 | tig0021888:-42917 | Msa1394730:CDS |
| CTCTATCTATTCTGCCTGCA+CGG | 0.531142 | tig0021888:+42953 | None:intergenic |
| TGATCCATAAGGTTGCTCAT+AGG | 0.532353 | tig0021888:-43491 | Msa1394730:CDS |
| TAGGTGTAATCCAATTGTGT+TGG | 0.533505 | tig0021888:-43472 | Msa1394730:CDS |
| GACTATGACAATAACCGTGC+AGG | 0.543680 | tig0021888:-42967 | Msa1394730:CDS |
| TGTTCCAATGACGAGAAAAG+TGG | 0.545436 | tig0021888:-43351 | Msa1394730:CDS |
| GTTCCAATGACGAGAAAAGT+GGG | 0.548017 | tig0021888:-43350 | Msa1394730:CDS |
| AGTTAAAGGATGGTGGAAGG+AGG | 0.557788 | tig0021888:-43409 | Msa1394730:CDS |
| AAAATCTGCGATGATCCATA+AGG | 0.558872 | tig0021888:-43502 | Msa1394730:CDS |
| GATGACATTACAAGCGTATG+TGG | 0.559882 | tig0021888:-42823 | Msa1394730:CDS |
| GGTAATGAGGTGACTTCACA+AGG | 0.574743 | tig0021888:-43069 | Msa1394730:CDS |
| TATGTGGAAATTAGAAGTGA+AGG | 0.575422 | tig0021888:-42807 | Msa1394730:exon |
| GGAGGAGAACAATGTAAGCT+GGG | 0.576028 | tig0021888:-43391 | Msa1394730:CDS |
| TCATTTCAGCTATACAATGT+CGG | 0.588108 | tig0021888:+43034 | None:intergenic |
| CTAAAAGTAAACAAAATGAC+AGG | 0.592262 | tig0021888:+42724 | None:intergenic |
| AATCTCTCTTGACTGCAACT+CGG | 0.607370 | tig0021888:+43192 | None:intergenic |
| GGAAGAACTAAAGGGTAATG+AGG | 0.610801 | tig0021888:-43082 | Msa1394730:CDS |
| GGAAATTAGAAGTGAAGGTG+AGG | 0.611848 | tig0021888:-42802 | Msa1394730:exon |
| TTTGCAGAGGAATTATCATG+AGG | 0.631740 | tig0021888:-43563 | Msa1394730:intron |
| AAAAGTTAAAGGATGGTGGA+AGG | 0.637401 | tig0021888:-43412 | Msa1394730:CDS |
| AACCAGATTGAACTAATAGA+GGG | 0.638427 | tig0021888:+42851 | None:intergenic |
| GTGAACTTTCTGTCCAACAA+CGG | 0.668255 | tig0021888:+42997 | None:intergenic |
| TCCAATGACGAGAAAAGTGG+GGG | 0.678217 | tig0021888:-43348 | Msa1394730:CDS |
| TTCCAATGACGAGAAAAGTG+GGG | 0.679735 | tig0021888:-43349 | Msa1394730:CDS |
| CCAACAACGGAAGCTCCACA+AGG | 0.688911 | tig0021888:+43010 | None:intergenic |
| TATAGCTGAAATGAACCTTG+TGG | 0.699115 | tig0021888:-43025 | Msa1394730:CDS |
| CAGATTGAACTAATAGAGGG+CGG | 0.706620 | tig0021888:+42854 | None:intergenic |
| TGTTGGACAGAAAGTTCACA+CGG | 0.710866 | tig0021888:-42993 | Msa1394730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AACAAATAAGAGATACATCT+TGG | - | tig0021888:43031-43050 | Msa1394730:CDS | 25.0% |
| ! | CTAAAAGTAAACAAAATGAC+AGG | + | tig0021888:43581-43600 | None:intergenic | 25.0% |
| ! | AACAAATAAGAGATACATCT+TGG | - | tig0021888:43031-43050 | Msa1394730:CDS | 25.0% |
| ! | CTAAAAGTAAACAAAATGAC+AGG | + | tig0021888:43581-43600 | None:intergenic | 25.0% |
| !!! | TGCTTAAAACTGTGTTGTTT+TGG | - | tig0021888:42634-42653 | Msa1394730:three_prime_UTR | 30.0% |
| !! | CATTGTTTCTTAATTTGCAG+AGG | - | tig0021888:42726-42745 | Msa1394730:three_prime_UTR | 30.0% |
| ! | GGAATTATCATGAGGATTTT+AGG | - | tig0021888:42747-42766 | Msa1394730:three_prime_UTR | 30.0% |
| !! | TTATCATGAGGATTTTAGGT+TGG | - | tig0021888:42751-42770 | Msa1394730:three_prime_UTR | 30.0% |
| !!! | CCATCCTTTAACTTTTTCAT+CGG | + | tig0021888:42886-42905 | None:intergenic | 30.0% |
| ATGAAAAAGTTAAAGGATGG+TGG | - | tig0021888:42886-42905 | Msa1394730:CDS | 30.0% | |
| ! | GAAGGAAAATTGATTCAAGA+AGG | - | tig0021888:43056-43075 | Msa1394730:CDS | 30.0% |
| ! | GTCAAGAGAGATTTGATTTA+TGG | - | tig0021888:43120-43139 | Msa1394730:CDS | 30.0% |
| TCAACACCTTTAATGATGTT+TGG | - | tig0021888:43173-43192 | Msa1394730:CDS | 30.0% | |
| AAATCGCCAAACATCATTAA+AGG | + | tig0021888:43182-43201 | None:intergenic | 30.0% | |
| !!! | TTTTCAAGAAGTTTTGGAAC+CGG | - | tig0021888:43199-43218 | Msa1394730:CDS | 30.0% |
| TCATTTCAGCTATACAATGT+CGG | + | tig0021888:43271-43290 | None:intergenic | 30.0% | |
| ! | AGATAGAGTTTTTGTAGATC+AGG | - | tig0021888:43364-43383 | Msa1394730:CDS | 30.0% |
| AACCAGATTGAACTAATAGA+GGG | + | tig0021888:43454-43473 | None:intergenic | 30.0% | |
| TATGTGGAAATTAGAAGTGA+AGG | - | tig0021888:43495-43514 | Msa1394730:CDS | 30.0% | |
| !!! | TGCTTAAAACTGTGTTGTTT+TGG | - | tig0021888:42634-42653 | Msa1394730:three_prime_UTR | 30.0% |
| !! | CATTGTTTCTTAATTTGCAG+AGG | - | tig0021888:42726-42745 | Msa1394730:three_prime_UTR | 30.0% |
| ! | GGAATTATCATGAGGATTTT+AGG | - | tig0021888:42747-42766 | Msa1394730:three_prime_UTR | 30.0% |
| !! | TTATCATGAGGATTTTAGGT+TGG | - | tig0021888:42751-42770 | Msa1394730:three_prime_UTR | 30.0% |
| !!! | CCATCCTTTAACTTTTTCAT+CGG | + | tig0021888:42886-42905 | None:intergenic | 30.0% |
| ATGAAAAAGTTAAAGGATGG+TGG | - | tig0021888:42886-42905 | Msa1394730:CDS | 30.0% | |
| ! | GAAGGAAAATTGATTCAAGA+AGG | - | tig0021888:43056-43075 | Msa1394730:CDS | 30.0% |
| ! | GTCAAGAGAGATTTGATTTA+TGG | - | tig0021888:43120-43139 | Msa1394730:CDS | 30.0% |
| TCAACACCTTTAATGATGTT+TGG | - | tig0021888:43173-43192 | Msa1394730:CDS | 30.0% | |
| AAATCGCCAAACATCATTAA+AGG | + | tig0021888:43182-43201 | None:intergenic | 30.0% | |
| !!! | TTTTCAAGAAGTTTTGGAAC+CGG | - | tig0021888:43199-43218 | Msa1394730:CDS | 30.0% |
| TCATTTCAGCTATACAATGT+CGG | + | tig0021888:43271-43290 | None:intergenic | 30.0% | |
| ! | AGATAGAGTTTTTGTAGATC+AGG | - | tig0021888:43364-43383 | Msa1394730:CDS | 30.0% |
| AACCAGATTGAACTAATAGA+GGG | + | tig0021888:43454-43473 | None:intergenic | 30.0% | |
| TATGTGGAAATTAGAAGTGA+AGG | - | tig0021888:43495-43514 | Msa1394730:CDS | 30.0% | |
| TTTGCAGAGGAATTATCATG+AGG | - | tig0021888:42739-42758 | Msa1394730:three_prime_UTR | 35.0% | |
| !!! | AGGATTTTAGGTTGGAATGT+AGG | - | tig0021888:42759-42778 | Msa1394730:three_prime_UTR | 35.0% |
| !!! | ATTTTAGGTTGGAATGTAGG+AGG | - | tig0021888:42762-42781 | Msa1394730:three_prime_UTR | 35.0% |
| !!! | TTTTAGGTTGGAATGTAGGA+GGG | - | tig0021888:42763-42782 | Msa1394730:three_prime_UTR | 35.0% |
| AAAATCTGCGATGATCCATA+AGG | - | tig0021888:42800-42819 | Msa1394730:exon | 35.0% | |
| TAGGTGTAATCCAATTGTGT+TGG | - | tig0021888:42830-42849 | Msa1394730:CDS | 35.0% | |
| AGGTGTAATCCAATTGTGTT+GGG | - | tig0021888:42831-42850 | Msa1394730:CDS | 35.0% | |
| CTCACCGATGAAAAAGTTAA+AGG | - | tig0021888:42879-42898 | Msa1394730:CDS | 35.0% | |
| CCGATGAAAAAGTTAAAGGA+TGG | - | tig0021888:42883-42902 | Msa1394730:CDS | 35.0% | |
| !! | AAAAGTTAAAGGATGGTGGA+AGG | - | tig0021888:42890-42909 | Msa1394730:CDS | 35.0% |
| AAGAGATACATCTTGGTTGA+AGG | - | tig0021888:43038-43057 | Msa1394730:CDS | 35.0% | |
| !! | TGGCGATTTTCAAGAAGTTT+TGG | - | tig0021888:43193-43212 | Msa1394730:CDS | 35.0% |
| !! | TCATTACCCTTTAGTTCTTC+CGG | + | tig0021888:43221-43240 | None:intergenic | 35.0% |
| TATAGCTGAAATGAACCTTG+TGG | - | tig0021888:43277-43296 | Msa1394730:CDS | 35.0% | |
| ! | GAGTTTTTGTAGATCAGGAA+TGG | - | tig0021888:43369-43388 | Msa1394730:CDS | 35.0% |
| !!! | ATTTCAAGGTTTTGAAGCTG+CGG | - | tig0021888:43399-43418 | Msa1394730:CDS | 35.0% |
| GAACCAGATTGAACTAATAG+AGG | + | tig0021888:43455-43474 | None:intergenic | 35.0% | |
| TTTGCAGAGGAATTATCATG+AGG | - | tig0021888:42739-42758 | Msa1394730:three_prime_UTR | 35.0% | |
| !!! | AGGATTTTAGGTTGGAATGT+AGG | - | tig0021888:42759-42778 | Msa1394730:three_prime_UTR | 35.0% |
| !!! | ATTTTAGGTTGGAATGTAGG+AGG | - | tig0021888:42762-42781 | Msa1394730:three_prime_UTR | 35.0% |
| !!! | TTTTAGGTTGGAATGTAGGA+GGG | - | tig0021888:42763-42782 | Msa1394730:three_prime_UTR | 35.0% |
| AAAATCTGCGATGATCCATA+AGG | - | tig0021888:42800-42819 | Msa1394730:exon | 35.0% | |
| TAGGTGTAATCCAATTGTGT+TGG | - | tig0021888:42830-42849 | Msa1394730:CDS | 35.0% | |
| AGGTGTAATCCAATTGTGTT+GGG | - | tig0021888:42831-42850 | Msa1394730:CDS | 35.0% | |
| CTCACCGATGAAAAAGTTAA+AGG | - | tig0021888:42879-42898 | Msa1394730:CDS | 35.0% | |
| CCGATGAAAAAGTTAAAGGA+TGG | - | tig0021888:42883-42902 | Msa1394730:CDS | 35.0% | |
| !! | AAAAGTTAAAGGATGGTGGA+AGG | - | tig0021888:42890-42909 | Msa1394730:CDS | 35.0% |
| AAGAGATACATCTTGGTTGA+AGG | - | tig0021888:43038-43057 | Msa1394730:CDS | 35.0% | |
| !! | TGGCGATTTTCAAGAAGTTT+TGG | - | tig0021888:43193-43212 | Msa1394730:CDS | 35.0% |
| !! | TCATTACCCTTTAGTTCTTC+CGG | + | tig0021888:43221-43240 | None:intergenic | 35.0% |
| TATAGCTGAAATGAACCTTG+TGG | - | tig0021888:43277-43296 | Msa1394730:CDS | 35.0% | |
| ! | GAGTTTTTGTAGATCAGGAA+TGG | - | tig0021888:43369-43388 | Msa1394730:CDS | 35.0% |
| !!! | ATTTCAAGGTTTTGAAGCTG+CGG | - | tig0021888:43399-43418 | Msa1394730:CDS | 35.0% |
| GAACCAGATTGAACTAATAG+AGG | + | tig0021888:43455-43474 | None:intergenic | 35.0% | |
| TGATCCATAAGGTTGCTCAT+AGG | - | tig0021888:42811-42830 | Msa1394730:exon | 40.0% | |
| TACACCTATGAGCAACCTTA+TGG | + | tig0021888:42818-42837 | None:intergenic | 40.0% | |
| TAATCCAATTGTGTTGGGCT+TGG | - | tig0021888:42836-42855 | Msa1394730:CDS | 40.0% | |
| TCGTCATTGGAACATGTTTC+TGG | + | tig0021888:42945-42964 | None:intergenic | 40.0% | |
| TGTTCCAATGACGAGAAAAG+TGG | - | tig0021888:42951-42970 | Msa1394730:CDS | 40.0% | |
| GTTCCAATGACGAGAAAAGT+GGG | - | tig0021888:42952-42971 | Msa1394730:CDS | 40.0% | |
| TTCCAATGACGAGAAAAGTG+GGG | - | tig0021888:42953-42972 | Msa1394730:CDS | 40.0% | |
| TCTTGACGTGTCTTTCCTAT+TGG | - | tig0021888:43079-43098 | Msa1394730:CDS | 40.0% | |
| AATCTCTCTTGACTGCAACT+CGG | + | tig0021888:43113-43132 | None:intergenic | 40.0% | |
| ! | TTTGGAACCGGAAGAACTAA+AGG | - | tig0021888:43211-43230 | Msa1394730:CDS | 40.0% |
| TTGGAACCGGAAGAACTAAA+GGG | - | tig0021888:43212-43231 | Msa1394730:CDS | 40.0% | |
| GGAAGAACTAAAGGGTAATG+AGG | - | tig0021888:43220-43239 | Msa1394730:CDS | 40.0% | |
| GTGAACTTTCTGTCCAACAA+CGG | + | tig0021888:43308-43327 | None:intergenic | 40.0% | |
| TGTTGGACAGAAAGTTCACA+CGG | - | tig0021888:43309-43328 | Msa1394730:CDS | 40.0% | |
| !!! | TTTCAAGGTTTTGAAGCTGC+GGG | - | tig0021888:43400-43419 | Msa1394730:CDS | 40.0% |
| CAGATTGAACTAATAGAGGG+CGG | + | tig0021888:43451-43470 | None:intergenic | 40.0% | |
| GATGACATTACAAGCGTATG+TGG | - | tig0021888:43479-43498 | Msa1394730:CDS | 40.0% | |
| GGAAATTAGAAGTGAAGGTG+AGG | - | tig0021888:43500-43519 | Msa1394730:CDS | 40.0% | |
| CTGCACTCAGATGTAATTCT+TGG | - | tig0021888:43668-43687 | Msa1394730:intron | 40.0% | |
| TGATCCATAAGGTTGCTCAT+AGG | - | tig0021888:42811-42830 | Msa1394730:exon | 40.0% | |
| TACACCTATGAGCAACCTTA+TGG | + | tig0021888:42818-42837 | None:intergenic | 40.0% | |
| TAATCCAATTGTGTTGGGCT+TGG | - | tig0021888:42836-42855 | Msa1394730:CDS | 40.0% | |
| TCGTCATTGGAACATGTTTC+TGG | + | tig0021888:42945-42964 | None:intergenic | 40.0% | |
| TGTTCCAATGACGAGAAAAG+TGG | - | tig0021888:42951-42970 | Msa1394730:CDS | 40.0% | |
| GTTCCAATGACGAGAAAAGT+GGG | - | tig0021888:42952-42971 | Msa1394730:CDS | 40.0% | |
| TTCCAATGACGAGAAAAGTG+GGG | - | tig0021888:42953-42972 | Msa1394730:CDS | 40.0% | |
| TCTTGACGTGTCTTTCCTAT+TGG | - | tig0021888:43079-43098 | Msa1394730:CDS | 40.0% | |
| AATCTCTCTTGACTGCAACT+CGG | + | tig0021888:43113-43132 | None:intergenic | 40.0% | |
| ! | TTTGGAACCGGAAGAACTAA+AGG | - | tig0021888:43211-43230 | Msa1394730:CDS | 40.0% |
| TTGGAACCGGAAGAACTAAA+GGG | - | tig0021888:43212-43231 | Msa1394730:CDS | 40.0% | |
| GGAAGAACTAAAGGGTAATG+AGG | - | tig0021888:43220-43239 | Msa1394730:CDS | 40.0% | |
| GTGAACTTTCTGTCCAACAA+CGG | + | tig0021888:43308-43327 | None:intergenic | 40.0% | |
| TGTTGGACAGAAAGTTCACA+CGG | - | tig0021888:43309-43328 | Msa1394730:CDS | 40.0% | |
| !!! | TTTCAAGGTTTTGAAGCTGC+GGG | - | tig0021888:43400-43419 | Msa1394730:CDS | 40.0% |
| CAGATTGAACTAATAGAGGG+CGG | + | tig0021888:43451-43470 | None:intergenic | 40.0% | |
| GATGACATTACAAGCGTATG+TGG | - | tig0021888:43479-43498 | Msa1394730:CDS | 40.0% | |
| GGAAATTAGAAGTGAAGGTG+AGG | - | tig0021888:43500-43519 | Msa1394730:CDS | 40.0% | |
| CTGCACTCAGATGTAATTCT+TGG | - | tig0021888:43668-43687 | Msa1394730:intron | 40.0% | |
| GTAGGAGGGATTACTGAGTT+AGG | - | tig0021888:42777-42796 | Msa1394730:three_prime_UTR | 45.0% | |
| TTGACCAAGCCCAACACAAT+TGG | + | tig0021888:42843-42862 | None:intergenic | 45.0% | |
| !! | AGTTAAAGGATGGTGGAAGG+AGG | - | tig0021888:42893-42912 | Msa1394730:CDS | 45.0% |
| AGGAGGAGAACAATGTAAGC+TGG | - | tig0021888:42910-42929 | Msa1394730:CDS | 45.0% | |
| GGAGGAGAACAATGTAAGCT+GGG | - | tig0021888:42911-42930 | Msa1394730:CDS | 45.0% | |
| TCCAATGACGAGAAAAGTGG+GGG | - | tig0021888:42954-42973 | Msa1394730:CDS | 45.0% | |
| ! | GACAGGGATTGGTATTCTCT+TGG | - | tig0021888:42976-42995 | Msa1394730:CDS | 45.0% |
| !! | AACTCGGTGCATGAACCAAT+AGG | + | tig0021888:43097-43116 | None:intergenic | 45.0% |
| GGTAATGAGGTGACTTCACA+AGG | - | tig0021888:43233-43252 | Msa1394730:CDS | 45.0% | |
| GACTATGACAATAACCGTGC+AGG | - | tig0021888:43335-43354 | Msa1394730:CDS | 45.0% | |
| CTCTATCTATTCTGCCTGCA+CGG | + | tig0021888:43352-43371 | None:intergenic | 45.0% | |
| ! | GGAATGGCTAGAGCATTTCA+AGG | - | tig0021888:43385-43404 | Msa1394730:CDS | 45.0% |
| !!! | TTCAAGGTTTTGAAGCTGCG+GGG | - | tig0021888:43401-43420 | Msa1394730:CDS | 45.0% |
| CGCCCTCTATTAGTTCAATC+TGG | - | tig0021888:43449-43468 | Msa1394730:CDS | 45.0% | |
| GTAGGAGGGATTACTGAGTT+AGG | - | tig0021888:42777-42796 | Msa1394730:three_prime_UTR | 45.0% | |
| TTGACCAAGCCCAACACAAT+TGG | + | tig0021888:42843-42862 | None:intergenic | 45.0% | |
| !! | AGTTAAAGGATGGTGGAAGG+AGG | - | tig0021888:42893-42912 | Msa1394730:CDS | 45.0% |
| AGGAGGAGAACAATGTAAGC+TGG | - | tig0021888:42910-42929 | Msa1394730:CDS | 45.0% | |
| GGAGGAGAACAATGTAAGCT+GGG | - | tig0021888:42911-42930 | Msa1394730:CDS | 45.0% | |
| TCCAATGACGAGAAAAGTGG+GGG | - | tig0021888:42954-42973 | Msa1394730:CDS | 45.0% | |
| ! | GACAGGGATTGGTATTCTCT+TGG | - | tig0021888:42976-42995 | Msa1394730:CDS | 45.0% |
| !! | AACTCGGTGCATGAACCAAT+AGG | + | tig0021888:43097-43116 | None:intergenic | 45.0% |
| GGTAATGAGGTGACTTCACA+AGG | - | tig0021888:43233-43252 | Msa1394730:CDS | 45.0% | |
| GACTATGACAATAACCGTGC+AGG | - | tig0021888:43335-43354 | Msa1394730:CDS | 45.0% | |
| CTCTATCTATTCTGCCTGCA+CGG | + | tig0021888:43352-43371 | None:intergenic | 45.0% | |
| ! | GGAATGGCTAGAGCATTTCA+AGG | - | tig0021888:43385-43404 | Msa1394730:CDS | 45.0% |
| !!! | TTCAAGGTTTTGAAGCTGCG+GGG | - | tig0021888:43401-43420 | Msa1394730:CDS | 45.0% |
| CGCCCTCTATTAGTTCAATC+TGG | - | tig0021888:43449-43468 | Msa1394730:CDS | 45.0% | |
| !! | TCCCCCACTTTTCTCGTCAT+TGG | + | tig0021888:42958-42977 | None:intergenic | 50.0% |
| !! | TCCCCCACTTTTCTCGTCAT+TGG | + | tig0021888:42958-42977 | None:intergenic | 50.0% |
| TGACGAGAAAAGTGGGGGAC+AGG | - | tig0021888:42959-42978 | Msa1394730:CDS | 55.0% | |
| GACGAGAAAAGTGGGGGACA+GGG | - | tig0021888:42960-42979 | Msa1394730:CDS | 55.0% | |
| GAAAAGTGGGGGACAGGGAT+TGG | - | tig0021888:42965-42984 | Msa1394730:CDS | 55.0% | |
| CCAACAACGGAAGCTCCACA+AGG | + | tig0021888:43295-43314 | None:intergenic | 55.0% | |
| CCTTGTGGAGCTTCCGTTGT+TGG | - | tig0021888:43292-43311 | Msa1394730:CDS | 55.0% | |
| TGACGAGAAAAGTGGGGGAC+AGG | - | tig0021888:42959-42978 | Msa1394730:CDS | 55.0% | |
| GACGAGAAAAGTGGGGGACA+GGG | - | tig0021888:42960-42979 | Msa1394730:CDS | 55.0% | |
| GAAAAGTGGGGGACAGGGAT+TGG | - | tig0021888:42965-42984 | Msa1394730:CDS | 55.0% | |
| CCAACAACGGAAGCTCCACA+AGG | + | tig0021888:43295-43314 | None:intergenic | 55.0% | |
| CCTTGTGGAGCTTCCGTTGT+TGG | - | tig0021888:43292-43311 | Msa1394730:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021888 | gene | 42591 | 43733 | 42591 | ID=Msa1394730;Name=Msa1394730 |
| tig0021888 | mRNA | 42591 | 43733 | 42591 | ID=Msa1394730-mRNA-1;Parent=Msa1394730;Name=Msa1394730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0.5|0.5|0|0.5|2|225|255 |
| tig0021888 | exon | 42591 | 43578 | 42591 | ID=Msa1394730-mRNA-1:exon:14495;Parent=Msa1394730-mRNA-1 |
| tig0021888 | exon | 43729 | 43733 | 43729 | ID=Msa1394730-mRNA-1:exon:14494;Parent=Msa1394730-mRNA-1 |
| tig0021888 | CDS | 43729 | 43733 | 43729 | ID=Msa1394730-mRNA-1:cds;Parent=Msa1394730-mRNA-1 |
| tig0021888 | CDS | 42816 | 43578 | 42816 | ID=Msa1394730-mRNA-1:cds;Parent=Msa1394730-mRNA-1 |
| tig0021888 | three_prime_UTR | 42591 | 42815 | 42591 | ID=Msa1394730-mRNA-1:three_prime_utr;Parent=Msa1394730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
