AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0027750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027750 MtrunA17_Chr1g0184151 95.614 342 15 0 1 342 1 342 0.0 686
Msa0027750 MtrunA17_Chr1g0184161 78.655 342 73 0 1 342 1 342 0.0 582
Msa0027750 MtrunA17_Chr1g0184121 64.307 339 119 2 1 338 1 338 8.60e-173 483
Msa0027750 MtrunA17_Chr1g0184101 65.015 343 118 2 1 342 1 342 1.63e-169 475
Msa0027750 MtrunA17_Chr1g0184111 64.307 339 119 2 1 338 1 338 1.95e-169 475
Msa0027750 MtrunA17_Chr6g0455481 43.658 339 185 4 1 336 4 339 2.42e-102 304
Msa0027750 MtrunA17_Chr7g0220011 42.857 336 187 3 1 334 1 333 1.22e-99 297
Msa0027750 MtrunA17_Chr7g0220001 41.768 328 186 3 1 326 3 327 2.41e-93 281
Msa0027750 MtrunA17_Chr8g0345831 39.939 328 194 3 1 326 4 330 1.14e-83 257
Msa0027750 MtrunA17_Chr3g0128001 38.438 333 197 5 10 338 8 336 4.53e-80 247
Msa0027750 MtrunA17_Chr5g0412651 37.537 341 204 6 5 338 6 344 3.48e-73 230
Msa0027750 MtrunA17_Chr5g0412671 36.890 328 201 4 17 338 17 344 2.51e-72 228
Msa0027750 MtrunA17_Chr7g0250511 35.577 312 195 6 12 319 22 331 8.49e-68 216
Msa0027750 MtrunA17_Chr5g0412681 36.964 303 181 4 26 324 21 317 5.97e-67 214
Msa0027750 MtrunA17_Chr1g0184141 70.312 128 38 0 77 204 1 128 1.12e-64 201
Msa0027750 MtrunA17_Chr1g0179801 36.228 334 192 6 1 321 27 352 5.97e-64 207
Msa0027750 MtrunA17_Chr7g0242551 36.111 324 191 7 10 319 21 342 3.83e-63 204
Msa0027750 MtrunA17_Chr7g0265221 34.337 332 189 5 12 321 35 359 5.66e-61 199
Msa0027750 MtrunA17_Chr4g0006371 34.718 337 187 9 10 319 20 350 2.23e-60 198
Msa0027750 MtrunA17_Chr7g0225881 34.795 342 202 8 10 337 34 368 6.17e-59 194
Msa0027750 MtrunA17_Chr1g0162351 33.841 328 191 6 15 319 47 371 1.75e-56 188
Msa0027750 MtrunA17_Chr1g0162321 33.537 328 192 6 15 319 47 371 3.17e-56 187
Msa0027750 MtrunA17_Chr6g0472861 34.402 343 205 8 10 337 34 371 3.61e-55 184
Msa0027750 MtrunA17_Chr1g0162361 34.018 341 205 5 15 338 4 341 5.25e-54 180
Msa0027750 MtrunA17_Chr7g0239821 32.602 319 202 7 15 326 40 352 6.83e-54 181
Msa0027750 MtrunA17_Chr5g0437181 33.439 314 198 7 15 319 25 336 2.20e-53 179
Msa0027750 MtrunA17_Chr7g0239121 33.333 324 194 10 15 326 27 340 7.43e-53 178
Msa0027750 MtrunA17_Chr4g0050031 35.294 289 176 4 38 319 62 346 1.91e-52 177
Msa0027750 MtrunA17_Chr3g0113641 33.333 315 197 8 15 319 26 337 3.97e-52 176
Msa0027750 MtrunA17_Chr5g0426891 32.492 317 202 6 10 319 11 322 5.12e-52 175
Msa0027750 MtrunA17_Chr7g0239111 34.062 320 196 9 15 326 31 343 5.65e-52 176
Msa0027750 MtrunA17_Chr3g0109041 32.934 334 203 9 10 329 16 342 9.93e-52 175
Msa0027750 MtrunA17_Chr4g0045411 34.472 322 188 9 18 321 11 327 1.36e-51 174
Msa0027750 MtrunA17_Chr7g0239101 34.277 318 192 8 11 319 27 336 1.75e-51 174
Msa0027750 MtrunA17_Chr8g0336781 36.964 303 178 9 34 328 91 388 8.53e-51 174
Msa0027750 MtrunA17_Chr8g0336751 34.364 291 179 7 38 321 94 379 3.70e-50 172
Msa0027750 MtrunA17_Chr2g0296371 32.110 327 204 9 8 323 21 340 1.88e-49 169
Msa0027750 MtrunA17_Chr4g0045441 32.063 315 194 5 24 319 13 326 3.94e-49 168
Msa0027750 MtrunA17_Chr5g0405411 32.759 290 179 6 19 298 20 303 4.23e-49 168
Msa0027750 MtrunA17_Chr8g0348081 33.441 311 196 7 35 338 57 363 1.20e-48 167
Msa0027750 MtrunA17_Chr3g0126741 33.223 301 182 7 29 319 50 341 2.87e-48 166
Msa0027750 MtrunA17_Chr8g0336861 33.555 301 190 5 35 328 57 354 3.16e-48 166
Msa0027750 MtrunA17_Chr8g0375571 30.240 334 225 5 15 342 22 353 3.35e-48 166
Msa0027750 MtrunA17_Chr2g0311831 33.657 309 191 8 38 338 68 370 1.21e-47 164
Msa0027750 MtrunA17_Chr8g0375671 30.818 318 212 5 15 326 29 344 1.69e-47 164
Msa0027750 MtrunA17_Chr8g0371931 31.615 291 183 6 18 298 19 303 2.75e-47 163
Msa0027750 MtrunA17_Chr4g0045431 33.939 330 187 11 24 330 13 334 3.81e-47 162
Msa0027750 MtrunA17_Chr2g0311921 33.546 313 189 8 38 339 54 358 5.79e-47 162
Msa0027750 MtrunA17_Chr8g0336761 33.758 314 190 9 26 328 46 352 9.83e-47 162
Msa0027750 MtrunA17_Chr2g0311741 33.898 295 185 6 37 326 26 315 1.61e-46 160
Msa0027750 MtrunA17_Chr5g0398291 28.783 337 221 9 10 331 14 346 1.92e-46 161
Msa0027750 MtrunA17_Chr2g0311761 34.516 310 188 9 38 338 68 371 2.22e-46 161
Msa0027750 MtrunA17_Chr8g0336851 32.797 311 198 6 35 338 57 363 2.71e-46 161
Msa0027750 MtrunA17_Chr8g0354241 34.295 312 188 7 37 337 67 372 2.83e-46 161
Msa0027750 MtrunA17_Chr3g0102041 30.539 334 210 8 25 341 26 354 3.24e-46 160
Msa0027750 MtrunA17_Chr1g0184241 32.895 304 194 5 10 309 40 337 3.39e-46 160
Msa0027750 MtrunA17_Chr3g0114861 30.530 321 215 3 10 326 12 328 4.55e-46 159
Msa0027750 MtrunA17_Chr8g0354261 33.974 312 189 7 37 337 67 372 5.15e-46 160
Msa0027750 MtrunA17_Chr8g0371921 29.446 343 216 8 18 341 19 354 6.10e-46 160
Msa0027750 MtrunA17_Chr5g0424201 29.352 293 200 3 38 326 44 333 1.26e-45 158
Msa0027750 MtrunA17_Chr4g0045471 32.840 338 192 11 12 322 1 330 1.35e-45 159
Msa0027750 MtrunA17_Chr8g0336631 32.523 329 196 9 26 338 46 364 1.69e-45 159
Msa0027750 MtrunA17_Chr1g0187821 32.899 307 196 5 37 337 66 368 4.31e-45 158
Msa0027750 MtrunA17_Chr2g0311861 34.091 308 171 8 38 338 64 346 1.24e-44 156
Msa0027750 MtrunA17_Chr4g0045451 31.056 322 194 8 24 322 13 329 1.46e-44 156
Msa0027750 MtrunA17_Chr5g0424211 32.509 283 174 6 37 309 41 316 1.66e-44 155
Msa0027750 MtrunA17_Chr8g0375701 30.284 317 211 8 15 326 31 342 2.06e-44 155
Msa0027750 MtrunA17_Chr8g0364471 30.645 310 202 5 37 337 66 371 5.96e-44 155
Msa0027750 MtrunA17_Chr3g0121141 31.973 294 184 6 36 323 2 285 9.14e-44 153
Msa0027750 MtrunA17_Chr7g0239071 34.766 256 160 5 68 319 29 281 9.46e-44 153
Msa0027750 MtrunA17_Chr3g0125201 32.667 300 178 9 37 323 2 290 1.68e-43 152
Msa0027750 MtrunA17_Chr7g0235951 31.731 312 198 7 37 338 66 372 2.14e-43 153
Msa0027750 MtrunA17_Chr1g0187811 30.994 342 217 8 12 338 155 492 2.40e-43 156
Msa0027750 MtrunA17_Chr8g0365241 30.395 329 202 9 12 326 31 346 2.79e-43 153
Msa0027750 MtrunA17_Chr8g0375601 30.240 334 213 9 15 337 22 346 3.85e-43 152
Msa0027750 MtrunA17_Chr2g0311701 31.773 299 188 6 37 324 68 361 4.43e-43 153
Msa0027750 MtrunA17_Chr3g0093741 31.231 333 202 8 11 329 25 344 4.88e-43 152
Msa0027750 MtrunA17_Chr1g0167911 31.269 323 211 6 10 326 26 343 5.15e-43 152
Msa0027750 MtrunA17_Chr2g0311711 31.803 305 179 8 37 325 66 357 5.73e-43 152
Msa0027750 MtrunA17_Chr3g0093751 31.003 329 208 8 11 329 25 344 6.76e-43 152
Msa0027750 MtrunA17_Chr4g0066121 30.921 304 198 6 26 320 46 346 6.83e-43 152
Msa0027750 MtrunA17_Chr2g0314401 30.699 329 208 9 12 329 25 344 1.30e-42 151
Msa0027750 MtrunA17_Chr3g0093761 30.699 329 208 8 11 329 25 343 2.16e-42 150
Msa0027750 MtrunA17_Chr2g0311681 32.686 309 173 8 37 327 62 353 2.41e-42 150
Msa0027750 MtrunA17_Chr4g0068891 30.945 307 193 8 38 334 20 317 3.09e-42 149
Msa0027750 MtrunA17_Chr1g0162191 32.646 291 180 7 38 319 47 330 5.36e-42 149
Msa0027750 MtrunA17_Chr1g0161041 32.229 332 201 9 10 329 66 385 6.31e-42 150
Msa0027750 MtrunA17_Chr5g0423201 30.068 296 194 8 38 326 47 336 8.74e-42 149
Msa0027750 MtrunA17_Chr1g0187831 30.844 308 202 5 37 337 69 372 1.05e-41 149
Msa0027750 MtrunA17_Chr2g0314381 28.308 325 219 6 10 326 49 367 1.06e-41 149
Msa0027750 MtrunA17_Chr2g0311691 32.686 309 173 9 37 327 62 353 1.91e-41 148
Msa0027750 MtrunA17_Chr5g0423221 30.061 326 213 8 12 329 45 363 2.01e-41 148
Msa0027750 MtrunA17_Chr2g0289341 31.987 297 182 9 37 324 3 288 2.78e-41 146
Msa0027750 MtrunA17_Chr4g0055591 29.293 297 195 6 37 326 60 348 3.39e-41 147
Msa0027750 MtrunA17_Chr5g0421011 29.102 323 215 7 11 326 20 335 8.65e-41 146
Msa0027750 MtrunA17_Chr5g0420981 29.766 299 191 7 38 326 53 342 1.40e-40 145
Msa0027750 MtrunA17_Chr5g0420951 29.667 300 196 6 35 326 50 342 1.42e-40 145
Msa0027750 MtrunA17_Chr2g0332191 28.399 331 213 8 10 326 23 343 1.43e-40 146
Msa0027750 MtrunA17_Chr5g0439011 30.797 276 176 5 37 306 4 270 1.81e-40 144
Msa0027750 MtrunA17_Chr2g0311631 29.518 332 204 7 10 324 28 346 2.04e-40 145
Msa0027750 MtrunA17_Chr1g0161111 31.940 335 214 8 10 337 102 429 2.19e-40 147
Msa0027750 MtrunA17_Chr7g0266651 29.179 329 220 7 10 330 30 353 6.65e-40 144
Msa0027750 MtrunA17_Chr5g0420941 27.515 338 229 7 12 341 19 348 1.16e-39 143
Msa0027750 MtrunA17_Chr1g0167951 31.935 310 187 11 10 307 26 323 1.93e-39 142
Msa0027750 MtrunA17_Chr7g0232161 34.247 292 169 11 15 297 36 313 2.02e-39 142
Msa0027750 MtrunA17_Chr1g0184131 44.375 160 47 1 225 342 1 160 2.36e-39 137
Msa0027750 MtrunA17_Chr4g0064781 30.159 315 197 7 38 342 50 351 2.53e-39 142
Msa0027750 MtrunA17_Chr1g0191201 28.994 338 217 7 15 337 33 362 3.02e-39 142
Msa0027750 MtrunA17_Chr7g0239091 31.447 318 195 10 15 325 136 437 3.28e-39 144
Msa0027750 MtrunA17_Chr5g0423251 29.688 320 209 9 15 326 24 335 4.35e-39 141
Msa0027750 MtrunA17_Chr5g0420901 29.595 321 210 7 12 324 20 332 4.88e-39 141
Msa0027750 MtrunA17_Chr5g0421041 30.581 327 203 11 11 326 20 333 5.76e-39 141
Msa0027750 MtrunA17_Chr1g0167961 31.353 303 188 8 35 326 66 359 7.49e-39 141
Msa0027750 MtrunA17_Chr5g0423191 28.972 321 210 9 15 326 24 335 8.04e-39 141
Msa0027750 MtrunA17_Chr8g0370711 30.169 295 197 6 38 327 52 342 1.23e-38 140
Msa0027750 MtrunA17_Chr1g0161081 31.193 327 211 8 10 329 43 362 1.47e-38 140
Msa0027750 MtrunA17_Chr5g0421091 27.500 320 219 6 12 324 19 332 1.58e-38 140
Msa0027750 MtrunA17_Chr2g0314391 28.395 324 216 8 12 326 44 360 1.67e-38 140
Msa0027750 MtrunA17_Chr3g0087031 28.571 336 212 9 13 333 33 355 2.42e-38 140
Msa0027750 MtrunA17_Chr2g0319491 30.584 291 181 8 38 322 33 308 1.25e-37 137
Msa0027750 MtrunA17_Chr7g0265351 31.561 301 187 8 37 329 38 327 1.43e-37 137
Msa0027750 MtrunA17_Chr3g0145171 29.000 300 195 8 38 326 52 344 1.53e-37 137
Msa0027750 MtrunA17_Chr1g0167931 28.704 324 180 6 10 326 26 305 3.45e-37 135
Msa0027750 MtrunA17_Chr7g0236011 30.696 316 196 6 37 338 66 372 1.25e-36 135
Msa0027750 MtrunA17_Chr3g0125421 29.480 346 207 9 14 337 15 345 1.33e-36 135
Msa0027750 MtrunA17_Chr3g0145181 29.316 307 194 8 32 323 40 338 1.57e-36 135
Msa0027750 MtrunA17_Chr1g0194321 29.375 320 185 9 38 330 20 325 2.00e-36 134
Msa0027750 MtrunA17_Chr5g0421101 28.395 324 214 9 12 326 21 335 2.09e-36 134
Msa0027750 MtrunA17_Chr8g0351101 29.221 308 203 7 12 308 30 333 2.90e-36 134
Msa0027750 MtrunA17_Chr8g0375681 29.348 276 188 5 70 341 15 287 4.03e-36 132
Msa0027750 MtrunA17_Chr1g0204181 28.931 318 205 8 15 320 38 346 4.34e-36 134
Msa0027750 MtrunA17_Chr3g0092531 30.000 290 187 5 38 319 6 287 5.13e-36 132
Msa0027750 MtrunA17_Chr8g0335411 30.872 298 191 7 37 324 66 358 8.47e-36 133
Msa0027750 MtrunA17_Chr3g0114871 29.889 271 173 7 1 260 1 265 1.46e-35 130
Msa0027750 MtrunA17_Chr5g0423211 29.358 327 207 11 12 325 21 336 3.06e-35 131
Msa0027750 MtrunA17_Chr4g0011311 31.197 234 153 6 37 266 66 295 5.20e-35 129
Msa0027750 MtrunA17_Chr8g0370721 28.105 306 211 7 38 338 52 353 9.34e-35 130
Msa0027750 MtrunA17_Chr4g0045461 29.032 310 200 6 35 325 23 331 3.73e-34 129
Msa0027750 MtrunA17_Chr8g0358941 29.305 331 194 11 34 342 23 335 4.59e-34 128
Msa0027750 MtrunA17_Chr7g0235981 29.964 277 182 4 72 341 58 329 5.12e-34 127
Msa0027750 MtrunA17_Chr2g0285931 25.915 328 204 8 18 325 11 319 1.23e-33 127
Msa0027750 MtrunA17_Chr3g0145201 29.630 270 175 5 55 315 704 967 1.23e-33 131
Msa0027750 MtrunA17_Chr4g0066991 30.547 311 183 7 37 338 66 352 2.15e-33 126
Msa0027750 MtrunA17_Chr2g0313111 28.710 310 190 9 34 329 24 316 3.23e-33 125
Msa0027750 MtrunA17_Chr7g0247991 30.449 312 202 7 37 338 66 372 3.27e-33 126
Msa0027750 MtrunA17_Chr6g0474391 29.245 318 204 9 15 320 43 351 1.47e-31 122
Msa0027750 MtrunA17_Chr5g0394071 37.576 165 96 2 156 319 5 163 9.63e-31 115
Msa0027750 MtrunA17_Chr3g0130391 26.911 327 218 7 6 320 36 353 1.24e-30 119
Msa0027750 MtrunA17_Chr8g0362741 32.301 226 133 7 37 260 66 273 2.37e-30 116
Msa0027750 MtrunA17_Chr7g0219991 39.103 156 89 3 1 153 1 153 1.16e-29 116
Msa0027750 MtrunA17_Chr7g0219991 46.364 110 58 1 150 258 245 354 3.15e-27 109
Msa0027750 MtrunA17_Chr1g0148771 26.621 293 185 7 38 319 63 336 1.27e-29 116
Msa0027750 MtrunA17_Chr5g0420721 30.159 189 124 4 143 326 52 237 4.28e-29 112
Msa0027750 MtrunA17_Chr4g0004061 26.557 305 205 8 38 331 9 305 7.25e-29 113
Msa0027750 MtrunA17_Chr8g0389941 30.721 319 192 10 31 326 26 338 1.56e-28 113
Msa0027750 MtrunA17_Chr1g0170631 37.209 172 100 5 153 319 3 171 4.06e-28 108
Msa0027750 MtrunA17_Chr1g0170641 35.862 145 88 4 11 153 20 161 4.10e-28 107
Msa0027750 MtrunA17_Chr7g0233661 40.385 156 81 2 178 332 1 145 5.90e-28 107
Msa0027750 MtrunA17_Chr8g0384461 25.532 329 214 9 15 327 26 339 9.50e-28 111
Msa0027750 MtrunA17_Chr4g0004071 24.837 306 214 5 35 331 6 304 1.21e-27 110
Msa0027750 MtrunA17_Chr6g0486831 29.969 327 196 10 40 342 23 340 4.16e-27 109
Msa0027750 MtrunA17_Chr2g0293931 33.854 192 114 5 156 334 10 201 8.76e-27 105
Msa0027750 MtrunA17_Chr8g0384481 25.159 314 222 6 15 319 38 347 2.04e-25 105
Msa0027750 MtrunA17_Chr2g0314371 27.333 300 178 9 12 280 26 316 3.38e-25 103
Msa0027750 MtrunA17_Chr4g0052251 25.874 286 183 7 58 324 43 318 4.38e-25 103
Msa0027750 MtrunA17_Chr3g0126761 32.353 170 111 2 153 319 44 212 4.71e-25 101
Msa0027750 MtrunA17_Chr8g0336801 33.766 154 99 1 188 338 2 155 6.35e-25 98.6
Msa0027750 MtrunA17_Chr6g0488511 27.134 328 186 13 37 342 2 298 2.39e-24 100
Msa0027750 MtrunA17_Chr4g0075471 37.398 123 76 1 184 305 16 138 6.92e-24 96.3
Msa0027750 MtrunA17_Chr7g0247741 27.083 288 198 6 38 319 11 292 1.27e-23 99.4
Msa0027750 MtrunA17_Chr8g0348951 26.552 290 198 7 38 319 10 292 2.36e-23 98.6
Msa0027750 MtrunA17_Chr5g0420881 34.884 129 83 1 197 324 1 129 2.66e-23 94.4
Msa0027750 MtrunA17_Chr4g0055911 28.349 321 204 10 37 339 8 320 1.04e-22 96.7
Msa0027750 MtrunA17_Chr4g0037611 38.760 129 77 2 165 291 3 131 1.48e-22 93.2
Msa0027750 MtrunA17_Chr8g0336831 33.511 188 116 6 35 217 57 240 2.24e-22 94.4
Msa0027750 MtrunA17_Chr3g0105281 26.316 304 190 9 29 322 25 304 2.33e-22 95.9
Msa0027750 MtrunA17_Chr4g0053251 26.552 290 188 8 36 302 6 293 9.89e-22 94.0
Msa0027750 MtrunA17_Chr8g0336871 32.738 168 103 3 166 329 3 164 1.17e-21 90.5
Msa0027750 MtrunA17_Chr1g0158011 26.939 245 155 7 93 318 1 240 6.27e-20 87.8
Msa0027750 MtrunA17_Chr3g0138351 22.903 310 220 9 38 333 7 311 9.14e-20 88.6
Msa0027750 MtrunA17_Chr4g0009561 23.920 301 212 9 36 323 5 301 1.41e-19 87.8
Msa0027750 MtrunA17_Chr8g0364171 34.454 119 76 2 153 269 18 136 3.00e-19 83.2
Msa0027750 MtrunA17_Chr7g0256741 25.914 301 181 11 35 313 7 287 3.29e-19 87.0
Msa0027750 MtrunA17_Chr2g0319521 34.545 110 71 1 152 260 15 124 3.43e-19 82.8
Msa0027750 MtrunA17_Chr4g0064771 34.940 166 103 3 154 315 27 191 1.79e-18 82.8
Msa0027750 MtrunA17_Chr3g0092581 29.193 161 108 3 163 319 1 159 1.94e-18 82.0
Msa0027750 MtrunA17_Chr4g0009541 24.490 294 200 10 40 323 17 298 2.60e-18 84.3
Msa0027750 MtrunA17_Chr4g0055871 25.753 299 202 7 38 324 9 299 3.15e-18 84.0
Msa0027750 MtrunA17_Chr1g0167921 37.864 103 63 1 158 259 54 156 1.53e-16 76.6
Msa0027750 MtrunA17_Chr5g0407731 24.013 304 208 11 34 329 29 317 4.01e-16 78.2
Msa0027750 MtrunA17_Chr8g0375581 48.485 66 33 1 191 255 19 84 1.31e-15 71.2
Msa0027750 MtrunA17_Chr2g0311611 40.845 71 35 1 197 260 1 71 5.95e-13 63.5
Msa0027750 MtrunA17_Chr1g0158021 24.675 231 140 7 38 252 49 261 9.98e-13 67.4
Msa0027750 MtrunA17_Chr1g0161101 38.824 85 43 1 194 278 403 478 2.00e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027750 AT5G24530.1 39.939 328 188 5 15 337 15 338 1.14e-78 244
Msa0027750 AT4G10490.1 36.950 341 210 4 4 340 7 346 1.50e-78 244
Msa0027750 AT4G10500.1 34.503 342 220 4 1 339 6 346 4.91e-74 233
Msa0027750 AT5G05600.1 37.037 324 183 9 10 319 33 349 8.88e-62 202
Msa0027750 AT2G44800.1 34.524 336 209 7 10 336 22 355 6.17e-61 199
Msa0027750 AT2G36690.2 35.762 302 185 5 15 308 32 332 1.79e-60 198
Msa0027750 AT2G36690.1 35.762 302 185 5 15 308 32 332 1.79e-60 198
Msa0027750 AT3G11180.1 35.938 320 192 7 10 319 62 378 9.74e-60 197
Msa0027750 AT3G11180.2 35.938 320 192 7 10 319 62 378 9.84e-60 197
Msa0027750 AT3G60290.1 35.691 311 193 6 14 319 26 334 4.13e-59 194
Msa0027750 AT5G07480.1 31.661 319 203 6 11 319 20 333 1.32e-58 193
Msa0027750 AT5G08640.2 33.333 294 189 3 37 326 42 332 3.92e-57 189
Msa0027750 AT5G08640.1 33.333 294 189 3 37 326 42 332 3.92e-57 189
Msa0027750 AT1G55290.1 34.049 326 203 5 10 329 32 351 4.35e-56 187
Msa0027750 AT3G55970.1 34.535 333 192 10 10 327 20 341 3.57e-54 182
Msa0027750 AT3G21420.1 36.877 301 174 8 36 325 53 348 2.07e-53 180
Msa0027750 AT2G38240.1 32.012 328 195 8 10 321 18 333 2.23e-53 179
Msa0027750 AT1G06620.1 34.969 326 197 9 10 326 33 352 3.81e-53 179
Msa0027750 AT5G59530.1 32.738 336 215 8 10 337 30 362 1.17e-50 172
Msa0027750 AT3G13610.1 30.462 325 215 5 10 329 33 351 1.02e-49 170
Msa0027750 AT5G63590.1 32.414 290 188 4 35 319 11 297 2.09e-49 168
Msa0027750 AT1G06645.1 33.546 313 187 9 37 338 76 378 4.16e-49 169
Msa0027750 AT3G19000.1 34.545 330 182 9 17 319 6 328 8.88e-49 167
Msa0027750 AT3G19010.1 34.062 320 188 9 19 319 8 323 3.72e-48 166
Msa0027750 AT3G19010.4 34.062 320 188 9 19 319 8 323 3.72e-48 166
Msa0027750 AT2G30830.1 33.333 297 185 7 38 326 54 345 2.02e-46 161
Msa0027750 AT4G16330.2 33.221 298 183 8 35 326 64 351 2.32e-46 161
Msa0027750 AT1G06650.2 34.106 302 182 9 37 328 63 357 2.77e-46 161
Msa0027750 AT3G51240.1 30.208 288 189 6 19 298 19 302 6.95e-46 160
Msa0027750 AT5G59540.1 31.773 299 194 6 38 329 61 356 1.03e-45 160
Msa0027750 AT5G12270.1 31.250 336 217 8 11 338 29 358 1.59e-45 159
Msa0027750 AT5G43440.1 33.639 327 186 11 10 320 30 341 1.80e-45 159
Msa0027750 AT1G77330.1 31.894 301 184 7 37 326 2 292 1.93e-45 157
Msa0027750 AT1G03410.2 31.902 326 204 8 10 325 26 343 6.73e-45 157
Msa0027750 AT1G04350.1 32.353 340 211 12 10 338 28 359 1.07e-44 157
Msa0027750 AT2G30840.1 32.484 314 190 9 38 338 57 361 1.11e-44 157
Msa0027750 AT3G61400.1 30.612 343 215 8 10 335 31 367 1.70e-44 157
Msa0027750 AT1G03410.1 31.902 326 204 8 10 325 63 380 1.91e-44 157
Msa0027750 AT5G63600.1 29.097 299 199 5 38 332 33 322 2.00e-44 155
Msa0027750 AT1G06640.1 33.876 307 176 11 37 328 63 357 3.29e-44 156
Msa0027750 AT4G25300.1 31.457 302 198 7 34 329 48 346 3.87e-44 155
Msa0027750 AT5G05600.2 36.981 265 146 9 10 260 33 290 4.38e-44 153
Msa0027750 AT1G17020.1 30.065 306 206 6 38 337 53 356 4.50e-44 155
Msa0027750 AT3G12900.1 32.099 324 211 7 10 329 28 346 4.64e-44 155
Msa0027750 AT1G06620.2 37.109 256 149 8 10 259 33 282 7.84e-44 152
Msa0027750 AT5G63600.2 29.000 300 199 6 38 332 33 323 1.38e-43 153
Msa0027750 AT4G22880.1 27.356 329 222 7 10 322 13 340 1.95e-43 153
Msa0027750 AT4G22880.2 27.356 329 222 7 10 322 13 340 1.95e-43 153
Msa0027750 AT4G22880.3 27.356 329 222 7 10 322 13 340 1.95e-43 153
Msa0027750 AT1G04380.1 32.492 317 202 9 15 326 23 332 2.78e-43 153
Msa0027750 AT1G03400.1 30.769 299 192 7 37 330 55 343 4.69e-43 152
Msa0027750 AT5G43450.1 33.333 303 182 9 25 320 49 338 2.34e-42 150
Msa0027750 AT1G78550.1 30.000 300 198 8 34 326 49 343 4.51e-42 150
Msa0027750 AT2G25450.1 32.450 302 179 8 38 327 55 343 5.46e-42 150
Msa0027750 AT4G21200.1 33.564 289 153 7 31 297 26 297 6.42e-42 149
Msa0027750 AT3G55970.2 35.338 266 154 9 10 260 20 282 1.15e-41 147
Msa0027750 AT2G30840.3 32.026 306 182 9 38 330 57 349 2.71e-41 148
Msa0027750 AT1G05010.1 32.000 275 169 7 37 303 3 267 3.97e-41 146
Msa0027750 AT1G17010.1 30.333 300 194 7 36 326 52 345 4.98e-41 147
Msa0027750 AT4G25310.1 30.769 286 185 6 55 334 70 348 9.09e-41 146
Msa0027750 AT4G16330.1 36.946 203 120 4 127 326 48 245 2.29e-40 142
Msa0027750 AT3G19010.3 31.661 319 167 9 19 319 8 293 3.77e-40 144
Msa0027750 AT1G12010.1 31.111 315 190 9 38 342 7 304 8.47e-40 143
Msa0027750 AT1G15550.1 27.778 306 191 7 37 326 56 347 8.53e-40 144
Msa0027750 AT1G62380.1 32.721 272 170 6 39 305 8 271 9.21e-40 143
Msa0027750 AT5G07200.1 28.107 338 203 8 13 327 35 355 4.33e-39 142
Msa0027750 AT5G51810.1 29.755 326 201 9 15 327 42 352 6.30e-39 142
Msa0027750 AT5G20400.1 32.012 328 198 12 15 327 19 336 8.73e-39 141
Msa0027750 AT5G63595.1 29.348 276 171 5 22 296 10 262 1.31e-38 139
Msa0027750 AT1G49390.1 30.154 325 213 9 13 326 17 338 1.33e-38 140
Msa0027750 AT1G80330.1 27.299 348 203 10 2 319 6 333 1.91e-38 140
Msa0027750 AT1G03400.2 28.135 327 192 8 37 330 55 371 6.24e-38 139
Msa0027750 AT5G43440.2 33.588 262 153 7 10 259 30 282 1.95e-37 136
Msa0027750 AT5G07480.2 32.000 225 143 4 103 319 2 224 1.99e-37 135
Msa0027750 AT3G19000.2 33.333 279 152 9 17 268 6 277 3.62e-37 135
Msa0027750 AT5G63580.2 31.602 231 149 4 34 260 15 240 8.94e-37 133
Msa0027750 AT1G60980.1 30.063 316 192 8 14 309 35 341 1.04e-36 136
Msa0027750 AT5G63580.1 31.878 229 147 4 34 258 15 238 2.61e-36 132
Msa0027750 AT1G30040.1 27.129 317 198 8 30 329 23 323 2.94e-36 134
Msa0027750 AT5G20550.1 31.173 324 204 12 15 324 19 337 3.32e-36 134
Msa0027750 AT5G54000.2 29.102 323 211 10 15 323 19 337 1.07e-35 133
Msa0027750 AT1G78550.2 28.947 266 178 7 67 326 5 265 9.94e-35 128
Msa0027750 AT4G25420.1 28.529 333 200 10 15 327 40 354 1.95e-34 130
Msa0027750 AT1G06650.1 33.906 233 136 6 37 260 63 286 2.17e-34 128
Msa0027750 AT2G34555.1 27.922 308 190 8 38 329 27 318 3.82e-34 128
Msa0027750 AT5G59540.2 31.466 232 142 6 38 260 61 284 4.00e-34 127
Msa0027750 AT1G78440.1 27.640 322 193 9 38 338 18 320 5.69e-34 127
Msa0027750 AT2G30840.2 34.361 227 140 5 38 259 57 279 1.05e-33 126
Msa0027750 AT1G06640.2 34.188 234 132 7 37 259 63 285 1.73e-33 126
Msa0027750 AT1G80340.1 24.051 316 225 5 11 319 23 330 1.97e-33 127
Msa0027750 AT1G06640.3 33.913 230 130 7 37 255 63 281 4.05e-33 124
Msa0027750 AT4G21690.1 26.087 345 217 13 2 326 16 342 8.11e-33 125
Msa0027750 AT5G43935.1 28.125 288 185 8 34 319 15 282 1.08e-32 123
Msa0027750 AT3G19010.2 32.171 258 160 5 19 261 8 265 1.34e-32 123
Msa0027750 AT5G43450.2 32.218 239 150 6 25 259 49 279 2.07e-32 122
Msa0027750 AT1G04380.2 32.400 250 160 7 15 262 23 265 2.15e-32 122
Msa0027750 AT3G51240.2 30.137 219 143 5 86 298 4 218 7.30e-32 120
Msa0027750 AT3G61400.2 30.682 264 164 7 10 260 31 288 1.64e-31 120
Msa0027750 AT1G02400.1 29.000 300 183 10 37 319 23 309 6.38e-31 119
Msa0027750 AT5G54000.1 29.615 260 173 7 71 323 1 257 1.88e-30 117
Msa0027750 AT1G47990.1 28.239 301 172 9 32 309 9 288 2.13e-30 118
Msa0027750 AT1G49390.2 28.736 261 179 6 71 326 1 259 2.42e-30 116
Msa0027750 AT5G51810.2 30.153 262 160 9 15 263 42 293 3.79e-29 114
Msa0027750 AT1G44090.1 27.303 304 198 7 38 327 63 357 8.93e-29 115
Msa0027750 AT4G25310.2 27.915 283 169 7 55 334 70 320 1.68e-27 110
Msa0027750 AT2G19590.1 28.616 318 192 11 38 342 11 306 2.01e-27 109
Msa0027750 AT1G50960.1 26.861 309 186 8 38 332 40 322 2.14e-27 110
Msa0027750 AT4G25300.2 32.086 187 122 3 152 334 72 257 4.09e-26 105
Msa0027750 AT1G30040.2 27.126 247 148 7 30 260 23 253 7.04e-25 102
Msa0027750 AT4G25420.2 28.736 261 153 9 15 255 40 287 2.72e-24 101
Msa0027750 AT1G52800.1 24.839 310 221 6 35 337 7 311 3.77e-23 98.2
Msa0027750 AT3G50210.4 25.078 319 210 8 37 326 7 325 1.65e-22 96.7
Msa0027750 AT3G50210.1 25.078 319 210 8 37 326 7 325 1.65e-22 96.7
Msa0027750 AT3G50210.3 25.078 319 210 8 37 326 7 325 1.65e-22 96.7
Msa0027750 AT4G03070.1 26.899 316 185 14 35 325 11 305 1.80e-22 96.7
Msa0027750 AT1G52820.1 24.542 273 200 4 58 328 36 304 3.89e-22 95.5
Msa0027750 AT1G02400.2 30.041 243 137 10 39 263 25 252 5.90e-22 94.0
Msa0027750 AT2G19590.2 30.097 206 127 6 146 342 94 291 8.35e-22 94.4
Msa0027750 AT4G23340.1 27.812 320 209 8 35 341 7 317 5.35e-21 92.4
Msa0027750 AT3G49620.1 26.316 304 184 9 34 306 30 324 1.21e-20 92.0
Msa0027750 AT3G49630.1 24.918 305 187 10 34 306 5 299 2.19e-20 90.9
Msa0027750 AT1G14130.1 28.082 292 179 10 38 317 9 281 2.21e-20 90.5
Msa0027750 AT3G46500.5 26.168 321 208 11 36 338 15 324 2.34e-19 87.8
Msa0027750 AT1G14120.2 28.169 284 181 10 38 313 8 276 5.61e-19 86.7
Msa0027750 AT1G14120.1 28.169 284 181 10 38 313 8 276 5.61e-19 86.7
Msa0027750 AT1G14120.3 28.169 284 181 10 38 313 8 276 5.61e-19 86.7
Msa0027750 AT3G46490.1 26.888 331 191 13 30 322 9 326 9.66e-19 86.3
Msa0027750 AT3G49630.3 24.042 287 186 8 42 306 19 295 1.00e-18 85.9
Msa0027750 AT3G47190.1 24.556 338 185 14 21 322 7 310 9.65e-18 83.2
Msa0027750 AT3G46500.10 29.208 202 130 6 146 338 53 250 4.37e-16 77.4
Msa0027750 AT3G46500.1 29.208 202 130 6 146 338 53 250 4.37e-16 77.4
Msa0027750 AT3G46500.4 30.688 189 118 6 159 338 4 188 5.59e-16 75.5
Msa0027750 AT1G28030.1 24.667 300 198 11 37 319 12 300 1.88e-15 76.6
Msa0027750 AT3G46490.2 26.644 289 169 11 30 288 9 284 4.26e-15 75.5
Msa0027750 AT2G06960.1 30.882 136 80 3 191 326 24 145 1.19e-14 70.9
Msa0027750 AT5G58660.1 23.659 317 187 12 38 322 34 327 1.25e-14 74.3
Msa0027750 AT3G50210.2 27.083 192 130 5 145 326 52 243 2.30e-14 72.4
Msa0027750 AT4G23340.2 30.986 142 93 2 205 341 58 199 2.06e-13 68.9
Msa0027750 AT3G49630.2 27.059 170 111 4 145 306 62 226 2.38e-13 69.7
Msa0027750 AT4G22870.1 30.526 95 65 1 229 322 2 96 1.42e-11 61.2
Msa0027750 AT1G52820.2 23.902 205 150 4 58 260 36 236 8.65e-11 62.0

Find 94 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGGAGTTTGGATTCTTTC+AGG 0.143451 1_1:-52329780 Msa0027750:intron
TGGAGCAGTGGCAACATTTA+TGG 0.183909 1_1:-52329455 Msa0027750:CDS
TCAAACGAAGTTAAGGAATT+AGG 0.190756 1_1:-52328591 Msa0027750:CDS
AGTCTTTACAAACATGTTAT+AGG 0.218853 1_1:-52327141 Msa0027750:three_prime_UTR
TCCCACTACTTTAACAAATA+TGG 0.221392 1_1:-52327321 Msa0027750:CDS
ACATTCCCTGGTCTTGATTC+TGG 0.234355 1_1:+52329899 None:intergenic
TTTGAGGCAACAAAGAATTA+AGG 0.259486 1_1:-52327273 Msa0027750:exon
CTGTATCTAGTTGGATATTC+AGG 0.262999 1_1:+52329432 None:intergenic
TGCTCATTGTTTCCTTCATT+TGG 0.280240 1_1:+52329634 None:intergenic
TACATCATCTTGCATTAAAA+TGG 0.280338 1_1:+52328404 None:intergenic
CTCTGGGACATATTGAATAT+TGG 0.282321 1_1:+52329937 None:intergenic
TATAAATGAAAATAACAAAT+TGG 0.290338 1_1:+52327193 None:intergenic
CCCAATGCCAAACTTGGTTC+AGG 0.327111 1_1:+52328459 None:intergenic
CTTGCATTAAAATGGTGATT+AGG 0.331490 1_1:+52328412 None:intergenic
TAGGCATCCATGTTATCCTT+TGG 0.334501 1_1:-52329475 Msa0027750:CDS
ATCAAAGCTGCTGAGGAGTT+TGG 0.334819 1_1:-52329791 Msa0027750:CDS
CTGAAATCCTTGTATTTGTA+AGG 0.340393 1_1:+52327345 None:intergenic
GTAGCCTACATTTATGATAA+AGG 0.365779 1_1:+52328323 None:intergenic
ACGATGCCCTGAACCAAGTT+TGG 0.372935 1_1:-52328466 Msa0027750:CDS
CTCATTCCCAATGCCAAACT+TGG 0.375463 1_1:+52328453 None:intergenic
TCAAGGCTCATGAATTTGAT+TGG 0.380400 1_1:-52328567 Msa0027750:CDS
TTGAAACAGGTTATTAATCA+TGG 0.383573 1_1:-52329669 Msa0027750:intron
CATTAAAATGGTGATTAGGT+TGG 0.389216 1_1:+52328416 None:intergenic
ATTAAAATGGTGATTAGGTT+GGG 0.391078 1_1:+52328417 None:intergenic
CAAGGCTCATGAATTTGATT+GGG 0.392990 1_1:-52328566 Msa0027750:CDS
TATTAATCATGGGATTTCAA+TGG 0.396172 1_1:-52329658 Msa0027750:CDS
GGTGGAAATATATAGTTCTC+TGG 0.398537 1_1:+52329920 None:intergenic
CCCTGAACCAAGTTTGGCAT+TGG 0.420955 1_1:-52328460 Msa0027750:CDS
TTTATTTACCTGTATCTAGT+TGG 0.422552 1_1:+52329423 None:intergenic
CAACTGAAAAGGTTCATCTA+TGG 0.423903 1_1:-52329509 Msa0027750:CDS
GCAAGTCAAGGTCGCACAAC+TGG 0.430750 1_1:-52327453 Msa0027750:CDS
TTAATGCAAGATGATGTATC+TGG 0.436398 1_1:-52328399 Msa0027750:CDS
ATCTATGGCGAGACAGTCTT+AGG 0.443264 1_1:-52329494 Msa0027750:CDS
AAATGATTAGTTGATTTGTC+AGG 0.443772 1_1:-52327090 None:intergenic
CTGAATATCCAACTAGATAC+AGG 0.450209 1_1:-52329431 Msa0027750:intron
GGATTTCTCAAACGAAGTTA+AGG 0.453289 1_1:-52328598 Msa0027750:CDS
CTGGGATGCTATTACTGAAT+GGG 0.458561 1_1:+52329870 None:intergenic
TTTCAACTATGCAACTGAAA+AGG 0.468616 1_1:-52329520 Msa0027750:CDS
TGATCTAAGTGAAGCATGTA+AGG 0.468628 1_1:-52329843 Msa0027750:CDS
TTGTAAGGTTTGCACATTGG+TGG 0.470197 1_1:+52327360 None:intergenic
TGTAGTGCTTAAATCATTTG+AGG 0.472728 1_1:-52327289 Msa0027750:CDS
GAAGGGCTTGGTTTGAAGTG+TGG 0.474946 1_1:-52328543 Msa0027750:CDS
TTTAAAATATTAAGAGCAAA+AGG 0.475669 1_1:-52330083 Msa0027750:five_prime_UTR
CCTGAACCAAGTTTGGCATT+GGG 0.475824 1_1:-52328459 Msa0027750:CDS
AACATCTTGCATGGCTTGGA+AGG 0.479041 1_1:+52329552 None:intergenic
TGAAACAGGTTATTAATCAT+GGG 0.491425 1_1:-52329668 Msa0027750:intron
CCAATGCCAAACTTGGTTCA+GGG 0.492968 1_1:+52328460 None:intergenic
TGGAACATGGATTGCTCTTG+AGG 0.496534 1_1:-52328358 Msa0027750:CDS
AGTAAACATCTTGCATGGCT+TGG 0.496588 1_1:+52329548 None:intergenic
CTCATGAATTTGATTGGGGA+AGG 0.498627 1_1:-52328561 Msa0027750:CDS
AATTTGATTGGGGAAGGGCT+TGG 0.498769 1_1:-52328555 Msa0027750:CDS
CACCATATTTGTTAAAGTAG+TGG 0.501105 1_1:+52327319 None:intergenic
TATGCCTTTATCATAAATGT+AGG 0.504151 1_1:-52328327 Msa0027750:CDS
ACCATATTTGTTAAAGTAGT+GGG 0.504566 1_1:+52327320 None:intergenic
AATTTCATTGTGTGAAGCAA+TGG 0.508243 1_1:-52329984 Msa0027750:exon
ACTGGGATGCTATTACTGAA+TGG 0.509509 1_1:+52329869 None:intergenic
GGTCTTCAAGTATTGAAAGA+TGG 0.520194 1_1:-52328378 Msa0027750:CDS
CATGTTATCCTTTGGAGCAG+TGG 0.527284 1_1:-52329467 Msa0027750:CDS
ACATTTATGATAAAGGCATA+AGG 0.533864 1_1:+52328330 None:intergenic
GTGGAAATATATAGTTCTCT+GGG 0.537434 1_1:+52329921 None:intergenic
GATTTCAATGGACCAAATGA+AGG 0.541597 1_1:-52329646 Msa0027750:CDS
AAATGTAGGCTACCAGCTGC+AGG 0.541823 1_1:-52328313 Msa0027750:intron
GAAAGATTGTGCTGGCTCTA+CGG 0.543787 1_1:+52327398 None:intergenic
TTCCCTGGTCTTGATTCTGG+TGG 0.544568 1_1:+52329902 None:intergenic
AAATGTTGCCACTGCTCCAA+AGG 0.548787 1_1:+52329459 None:intergenic
CACTGCTCCAAAGGATAACA+TGG 0.553237 1_1:+52329468 None:intergenic
TTAATAAGCGTACCTGCAGC+TGG 0.554374 1_1:+52328301 None:intergenic
GCTTCACTTAGATCAATCAC+TGG 0.558675 1_1:+52329851 None:intergenic
TCATGAATTTGATTGGGGAA+GGG 0.561604 1_1:-52328560 Msa0027750:CDS
GCATACCCATGTGGTTCGCA+TGG 0.562957 1_1:+52330106 None:intergenic
TATTTGTAAGGTTTGCACAT+TGG 0.565708 1_1:+52327357 None:intergenic
TGCAATTATCTGAAGGAGCT+AGG 0.567527 1_1:+52327421 None:intergenic
TTTCCACCAGAATCAAGACC+AGG 0.567736 1_1:-52329905 Msa0027750:CDS
ATAGTACTTTAAATACATAG+AGG 0.568371 1_1:+52327168 None:intergenic
AGAAACTTATTACAAATCGT+TGG 0.568698 1_1:-52329961 Msa0027750:CDS
AAGTATTGAAAGATGGAACA+TGG 0.586993 1_1:-52328371 Msa0027750:CDS
AAATTATGTTAACACTTGCA+AGG 0.589831 1_1:+52327246 None:intergenic
CTGCTAGTAAACATCTTGCA+TGG 0.595833 1_1:+52329543 None:intergenic
GTGCAAACCTTACAAATACA+AGG 0.599046 1_1:-52327352 Msa0027750:CDS
GAAAATTATCAAAGCTGCTG+AGG 0.602177 1_1:-52329798 Msa0027750:CDS
TGCCTACAGATAATCAGTAA+TGG 0.604490 1_1:-52327513 Msa0027750:intron
AAGGCTCATGAATTTGATTG+GGG 0.613524 1_1:-52328565 Msa0027750:CDS
TCTACGGTGCAATTATCTGA+AGG 0.616001 1_1:+52327414 None:intergenic
TCATCGATGAAAGATTGTGC+TGG 0.617469 1_1:+52327390 None:intergenic
CTTCACTTAGATCAATCACT+GGG 0.619527 1_1:+52329852 None:intergenic
AAGTTAAGGAATTAGGCTCA+AGG 0.623969 1_1:-52328584 Msa0027750:CDS
ACATCTTGCATGGCTTGGAA+GGG 0.624864 1_1:+52329553 None:intergenic
AAATGATTTAAGCACTACAT+CGG 0.640331 1_1:+52327293 None:intergenic
GATCTAAGTGAAGCATGTAA+GGG 0.647799 1_1:-52329842 Msa0027750:CDS
GTTGTGACTAATGCAAGTCA+AGG 0.651839 1_1:-52327465 Msa0027750:CDS
ACTATGCCATGCGAACCACA+TGG 0.654101 1_1:-52330112 Msa0027750:five_prime_UTR
TTCCACCAGAATCAAGACCA+GGG 0.677870 1_1:-52329904 Msa0027750:CDS
CTATGCCATGCGAACCACAT+GGG 0.683935 1_1:-52330111 Msa0027750:five_prime_UTR
AAACTTGGTTCAGGGCATCG+TGG 0.693357 1_1:+52328468 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAACAAGAAAATAAA+TGG + chr1_1:52327480-52327499 None:intergenic 10.0%
!!! ATTTAACATTATTTTTGTTT+TGG + chr1_1:52328079-52328098 None:intergenic 10.0%
!! TGTTAAATATATGTTATAAA+TGG - chr1_1:52328091-52328110 Msa0027750:intron 10.0%
!!! TATAAAATTCTAATTTGTTT+TGG + chr1_1:52329208-52329227 None:intergenic 10.0%
!! TATAAATGAAAATAACAAAT+TGG + chr1_1:52330029-52330048 None:intergenic 10.0%
!!! TTTAAAATATTAAGAGCAAA+AGG - chr1_1:52327136-52327155 Msa0027750:three_prime_UTR 15.0%
!!! ACATTTTTTTTTTTGTTTAG+AGG - chr1_1:52327505-52327524 Msa0027750:CDS 15.0%
!! ATCCCATTAAATAATTAATT+AGG + chr1_1:52327531-52327550 None:intergenic 15.0%
!!! ACAAAATCAAATTTTAAAGT+TGG - chr1_1:52327875-52327894 Msa0027750:intron 15.0%
!!! ATTTATGTATATGTATTTTG+TGG + chr1_1:52328148-52328167 None:intergenic 15.0%
!! AAAATACATATACATAAATG+TGG - chr1_1:52328149-52328168 Msa0027750:intron 15.0%
!! AAATACATATACATAAATGT+GGG - chr1_1:52328150-52328169 Msa0027750:intron 15.0%
!!! TTTGTTCATTTTTTTGATAA+GGG + chr1_1:52328272-52328291 None:intergenic 15.0%
!!! TTTTGTTCATTTTTTTGATA+AGG + chr1_1:52328273-52328292 None:intergenic 15.0%
!! TATGATAAAAGTTTATAAAC+GGG + chr1_1:52328475-52328494 None:intergenic 15.0%
!! GTATGATAAAAGTTTATAAA+CGG + chr1_1:52328476-52328495 None:intergenic 15.0%
!! CAAAAATTGATATATTTAGA+AGG + chr1_1:52328519-52328538 None:intergenic 15.0%
!!! TATATTTGATCATTTTGAAA+AGG + chr1_1:52329284-52329303 None:intergenic 15.0%
!! AAAATTGGAAATTATAGTAA+GGG + chr1_1:52329343-52329362 None:intergenic 15.0%
!! TAAAATTGGAAATTATAGTA+AGG + chr1_1:52329344-52329363 None:intergenic 15.0%
!!! TTTTCACATAATATAAAAGA+TGG + chr1_1:52329386-52329405 None:intergenic 15.0%
!! AGGCCTAATTAATTATTTAA+TGG - chr1_1:52327525-52327544 Msa0027750:intron 20.0%
!! GGCCTAATTAATTATTTAAT+GGG - chr1_1:52327526-52327545 Msa0027750:intron 20.0%
!!! AATGAAAATTTTTGGCTTTT+CGG - chr1_1:52328184-52328203 Msa0027750:intron 20.0%
!!! TTTTCGGGTATTTATAAAAT+GGG - chr1_1:52328200-52328219 Msa0027750:intron 20.0%
!! ATGATAAAAGTTTATAAACG+GGG + chr1_1:52328474-52328493 None:intergenic 20.0%
!! GTCTAACAAAAAATTTAGAA+GGG + chr1_1:52329062-52329081 None:intergenic 20.0%
!! AGTCTAACAAAAAATTTAGA+AGG + chr1_1:52329063-52329082 None:intergenic 20.0%
!! GTTAAGACTAAAAATAATGA+TGG + chr1_1:52329105-52329124 None:intergenic 20.0%
!!! AAAATTCTAATTTGTTTTGG+AGG + chr1_1:52329205-52329224 None:intergenic 20.0%
!!! TTCCAATTTTATTTTTTGAG+AGG - chr1_1:52329353-52329372 Msa0027750:intron 20.0%
!! ATCCTCTCAAAAAATAAAAT+TGG + chr1_1:52329358-52329377 None:intergenic 20.0%
!!! CTTATGACAGTTTTTTTTAA+GGG + chr1_1:52329591-52329610 None:intergenic 20.0%
!!! ACTTATGACAGTTTTTTTTA+AGG + chr1_1:52329592-52329611 None:intergenic 20.0%
!! AGTAATTGGAATCAATTATA+AGG + chr1_1:52329635-52329654 None:intergenic 20.0%
!! ATAGTACTTTAAATACATAG+AGG + chr1_1:52330054-52330073 None:intergenic 20.0%
!! TTCACACAATGAAATTTTGA+AGG + chr1_1:52327231-52327250 None:intergenic 25.0%
! AGAAACTTATTACAAATCGT+TGG - chr1_1:52327258-52327277 Msa0027750:exon 25.0%
! TTATTTAATGGGATTGAAAC+AGG - chr1_1:52327537-52327556 Msa0027750:intron 25.0%
! TTGAAACAGGTTATTAATCA+TGG - chr1_1:52327550-52327569 Msa0027750:intron 25.0%
! TGAAACAGGTTATTAATCAT+GGG - chr1_1:52327551-52327570 Msa0027750:intron 25.0%
! TATTAATCATGGGATTTCAA+TGG - chr1_1:52327561-52327580 Msa0027750:intron 25.0%
! TTTATTTACCTGTATCTAGT+TGG + chr1_1:52327799-52327818 None:intergenic 25.0%
! AAAATCGCAATCAAAATCAA+AGG - chr1_1:52327970-52327989 Msa0027750:intron 25.0%
!! AAAATCAAAGGATTTTACTC+AGG - chr1_1:52327982-52328001 Msa0027750:intron 25.0%
!! AAATCAAAGGATTTTACTCA+GGG - chr1_1:52327983-52328002 Msa0027750:intron 25.0%
!! AGTGAAGGAATGAAAATTTT+TGG - chr1_1:52328176-52328195 Msa0027750:intron 25.0%
!!! ATGAAAATTTTTGGCTTTTC+GGG - chr1_1:52328185-52328204 Msa0027750:intron 25.0%
!!! CTTTTCGGGTATTTATAAAA+TGG - chr1_1:52328199-52328218 Msa0027750:intron 25.0%
!!! AGGATTTTGATGTATTTTGA+AGG + chr1_1:52328297-52328316 None:intergenic 25.0%
!!! ATAGGATTTTGCCTATTTTT+GGG - chr1_1:52328355-52328374 Msa0027750:CDS 25.0%
!!! TCGGGTTTTTTTATAACAAT+GGG - chr1_1:52328445-52328464 Msa0027750:CDS 25.0%
!!! TATTTTGACAATGATCTTAC+TGG - chr1_1:52328700-52328719 Msa0027750:intron 25.0%
! ATTAAAATGGTGATTAGGTT+GGG + chr1_1:52328805-52328824 None:intergenic 25.0%
! TACATCATCTTGCATTAAAA+TGG + chr1_1:52328818-52328837 None:intergenic 25.0%
!! ACATTTATGATAAAGGCATA+AGG + chr1_1:52328892-52328911 None:intergenic 25.0%
! TATGCCTTTATCATAAATGT+AGG - chr1_1:52328892-52328911 Msa0027750:intron 25.0%
! TTAAAAAGAGTCGTTGATAT+TGG - chr1_1:52329010-52329029 Msa0027750:intron 25.0%
! TATTAATTAGATACGTCCTT+CGG - chr1_1:52329452-52329471 Msa0027750:CDS 25.0%
! ACTCAACTTTATCTTAGAAT+AGG + chr1_1:52329479-52329498 None:intergenic 25.0%
!! AGTTCAGATACATAAACTTT+TGG + chr1_1:52329504-52329523 None:intergenic 25.0%
! ACCAACTTTCTCTTATAAAT+AGG - chr1_1:52329531-52329550 Msa0027750:CDS 25.0%
! TCCTATTTATAAGAGAAAGT+TGG + chr1_1:52329535-52329554 None:intergenic 25.0%
!! ACTGTCATAAGTTTCTATTT+TGG - chr1_1:52329600-52329619 Msa0027750:CDS 25.0%
!!! TGTTAAATTGTATTGACTTG+TGG - chr1_1:52329680-52329699 Msa0027750:intron 25.0%
!! ACCATATTTGTTAAAGTAGT+GGG + chr1_1:52329902-52329921 None:intergenic 25.0%
! AAATGATTTAAGCACTACAT+CGG + chr1_1:52329929-52329948 None:intergenic 25.0%
! AAATTATGTTAACACTTGCA+AGG + chr1_1:52329976-52329995 None:intergenic 25.0%
! AGTCTTTACAAACATGTTAT+AGG - chr1_1:52330078-52330097 Msa0027750:five_prime_UTR 25.0%
!!! TATTTTAAAGCATACCCATG+TGG + chr1_1:52327125-52327144 None:intergenic 30.0%
! GAATGAAAGGTTTTTGTTGA+TGG + chr1_1:52327204-52327223 None:intergenic 30.0%
!! TTTTGAAGGTGAAGAATGAA+AGG + chr1_1:52327217-52327236 None:intergenic 30.0%
AATTTCATTGTGTGAAGCAA+TGG - chr1_1:52327235-52327254 Msa0027750:three_prime_UTR 30.0%
GTGGAAATATATAGTTCTCT+GGG + chr1_1:52327301-52327320 None:intergenic 30.0%
! GGAAACAATGAGCATTTTTA+AGG - chr1_1:52327594-52327613 Msa0027750:intron 30.0%
!!! AAGTTTTTTCTGTACTCATC+AGG + chr1_1:52327634-52327653 None:intergenic 30.0%
TTTCAACTATGCAACTGAAA+AGG - chr1_1:52327699-52327718 Msa0027750:intron 30.0%
TAAAATCGCAATCAAAATCG+AGG - chr1_1:52328047-52328066 Msa0027750:intron 30.0%
GGTATTTATAAAATGGGTCA+TGG - chr1_1:52328206-52328225 Msa0027750:intron 30.0%
! GATAGGATTTTGCCTATTTT+TGG - chr1_1:52328354-52328373 Msa0027750:CDS 30.0%
!!! CAGGATTTTAAGACTTAAGT+CGG - chr1_1:52328426-52328445 Msa0027750:CDS 30.0%
!!! AGGATTTTAAGACTTAAGTC+GGG - chr1_1:52328427-52328446 Msa0027750:CDS 30.0%
!!! GTCGGGTTTTTTTATAACAA+TGG - chr1_1:52328444-52328463 Msa0027750:CDS 30.0%
! GGCAGAAAAGTACATATATA+AGG + chr1_1:52328498-52328517 None:intergenic 30.0%
! CAAGGACAAAATATTTTACG+AGG + chr1_1:52328550-52328569 None:intergenic 30.0%
TCAAACGAAGTTAAGGAATT+AGG - chr1_1:52328628-52328647 Msa0027750:intron 30.0%
CATTAAAATGGTGATTAGGT+TGG + chr1_1:52328806-52328825 None:intergenic 30.0%
CTTGCATTAAAATGGTGATT+AGG + chr1_1:52328810-52328829 None:intergenic 30.0%
TTAATGCAAGATGATGTATC+TGG - chr1_1:52328820-52328839 Msa0027750:intron 30.0%
!! AAGTATTGAAAGATGGAACA+TGG - chr1_1:52328848-52328867 Msa0027750:intron 30.0%
GTAGCCTACATTTATGATAA+AGG + chr1_1:52328899-52328918 None:intergenic 30.0%
CTAAATTTGTCCCTAAATGT+AGG - chr1_1:52329317-52329336 Msa0027750:intron 30.0%
!! TTGAGAAAGTATTATTGACC+TGG + chr1_1:52329430-52329449 None:intergenic 30.0%
!!! TTTTTTTAAGGGATGACTTG+TGG + chr1_1:52329580-52329599 None:intergenic 30.0%
!! GTCATAAGTTTCTATTTTGG+TGG - chr1_1:52329603-52329622 Msa0027750:CDS 30.0%
TAGAGCAATTCAGAAGTAAT+TGG + chr1_1:52329649-52329668 None:intergenic 30.0%
! TACCATTACTGATTATCTGT+AGG + chr1_1:52329711-52329730 None:intergenic 30.0%
TATTTGTAAGGTTTGCACAT+TGG + chr1_1:52329865-52329884 None:intergenic 30.0%
CTGAAATCCTTGTATTTGTA+AGG + chr1_1:52329877-52329896 None:intergenic 30.0%
TCCCACTACTTTAACAAATA+TGG - chr1_1:52329898-52329917 Msa0027750:CDS 30.0%
! CACCATATTTGTTAAAGTAG+TGG + chr1_1:52329903-52329922 None:intergenic 30.0%
TGTAGTGCTTAAATCATTTG+AGG - chr1_1:52329930-52329949 Msa0027750:CDS 30.0%
! TTTGAGGCAACAAAGAATTA+AGG - chr1_1:52329946-52329965 Msa0027750:CDS 30.0%
!! CTCTGGGACATATTGAATAT+TGG + chr1_1:52327285-52327304 None:intergenic 35.0%
GGTGGAAATATATAGTTCTC+TGG + chr1_1:52327302-52327321 None:intergenic 35.0%
CTTCACTTAGATCAATCACT+GGG + chr1_1:52327370-52327389 None:intergenic 35.0%
TGATCTAAGTGAAGCATGTA+AGG - chr1_1:52327376-52327395 Msa0027750:CDS 35.0%
GATCTAAGTGAAGCATGTAA+GGG - chr1_1:52327377-52327396 Msa0027750:CDS 35.0%
GAAAATTATCAAAGCTGCTG+AGG - chr1_1:52327421-52327440 Msa0027750:CDS 35.0%
GATTTCAATGGACCAAATGA+AGG - chr1_1:52327573-52327592 Msa0027750:intron 35.0%
TGCTCATTGTTTCCTTCATT+TGG + chr1_1:52327588-52327607 None:intergenic 35.0%
CAACTGAAAAGGTTCATCTA+TGG - chr1_1:52327710-52327729 Msa0027750:intron 35.0%
CTGTATCTAGTTGGATATTC+AGG + chr1_1:52327790-52327809 None:intergenic 35.0%
CTGAATATCCAACTAGATAC+AGG - chr1_1:52327788-52327807 Msa0027750:intron 35.0%
!! GATTTTGATAACCTTGGTTG+GGG + chr1_1:52327904-52327923 None:intergenic 35.0%
!! CGATTTTGATAACCTTGGTT+GGG + chr1_1:52327905-52327924 None:intergenic 35.0%
CCAACCAAGGTTATCAAAAT+CGG - chr1_1:52327903-52327922 Msa0027750:intron 35.0%
CAACCAAGGTTATCAAAATC+GGG - chr1_1:52327904-52327923 Msa0027750:intron 35.0%
GACTTTACTTCAAGTCGAAA+GGG - chr1_1:52327926-52327945 Msa0027750:intron 35.0%
! GACTTTTGTAGAATCGATGT+AGG - chr1_1:52328005-52328024 Msa0027750:intron 35.0%
ATCGAGTCAATTTATGAACC+AGG - chr1_1:52328235-52328254 Msa0027750:intron 35.0%
! ATAAGGGTCAATTTTTCACC+TGG + chr1_1:52328256-52328275 None:intergenic 35.0%
! CAAAATCCTGCGATTTTGAA+TGG - chr1_1:52328308-52328327 Msa0027750:intron 35.0%
TGAAATCCATTCAAAATCGC+AGG + chr1_1:52328317-52328336 None:intergenic 35.0%
!! CGATTTTGTGCGATTTTGAT+AGG - chr1_1:52328337-52328356 Msa0027750:CDS 35.0%
CATAGCAAAGTCCCAAAAAT+AGG + chr1_1:52328369-52328388 None:intergenic 35.0%
!!! CTATTTTTGGGACTTTGCTA+TGG - chr1_1:52328367-52328386 Msa0027750:CDS 35.0%
CGACTTAAGTCTTAAAATCC+TGG + chr1_1:52328428-52328447 None:intergenic 35.0%
TACACGCTCTCTGTTAAAAA+AGG + chr1_1:52328599-52328618 None:intergenic 35.0%
!!! TTTTTTAACAGAGAGCGTGT+AGG - chr1_1:52328598-52328617 Msa0027750:CDS 35.0%
!! TTTTTAACAGAGAGCGTGTA+GGG - chr1_1:52328599-52328618 Msa0027750:CDS 35.0%
GGATTTCTCAAACGAAGTTA+AGG - chr1_1:52328621-52328640 Msa0027750:intron 35.0%
AAGTTAAGGAATTAGGCTCA+AGG - chr1_1:52328635-52328654 Msa0027750:intron 35.0%
TCAAGGCTCATGAATTTGAT+TGG - chr1_1:52328652-52328671 Msa0027750:intron 35.0%
CAAGGCTCATGAATTTGATT+GGG - chr1_1:52328653-52328672 Msa0027750:intron 35.0%
AAGGCTCATGAATTTGATTG+GGG - chr1_1:52328654-52328673 Msa0027750:intron 35.0%
TCATGAATTTGATTGGGGAA+GGG - chr1_1:52328659-52328678 Msa0027750:intron 35.0%
!! GGTCTTCAAGTATTGAAAGA+TGG - chr1_1:52328841-52328860 Msa0027750:intron 35.0%
AAAAGAGTCGTTGATATTGG+AGG - chr1_1:52329013-52329032 Msa0027750:intron 35.0%
AAAGAGTCGTTGATATTGGA+GGG - chr1_1:52329014-52329033 Msa0027750:intron 35.0%
ATAGTAAGGGCCTACATTTA+GGG + chr1_1:52329330-52329349 None:intergenic 35.0%
TATAGTAAGGGCCTACATTT+AGG + chr1_1:52329331-52329350 None:intergenic 35.0%
TTATCTTAGAATAGGACCGA+AGG + chr1_1:52329471-52329490 None:intergenic 35.0%
TCTCTTATAAATAGGACGAG+AGG - chr1_1:52329539-52329558 Msa0027750:CDS 35.0%
CTCTTATAAATAGGACGAGA+GGG - chr1_1:52329540-52329559 Msa0027750:CDS 35.0%
TGCCTACAGATAATCAGTAA+TGG - chr1_1:52329706-52329725 Msa0027750:intron 35.0%
GTGCAAACCTTACAAATACA+AGG - chr1_1:52329867-52329886 Msa0027750:CDS 35.0%
! TGGCATAGTTTTCTTGTGTC+TGG + chr1_1:52327096-52327115 None:intergenic 40.0%
! AATGGGATTTTCACATTCCC+TGG + chr1_1:52327335-52327354 None:intergenic 40.0%
CTGGGATGCTATTACTGAAT+GGG + chr1_1:52327352-52327371 None:intergenic 40.0%
ACTGGGATGCTATTACTGAA+TGG + chr1_1:52327353-52327372 None:intergenic 40.0%
GCTTCACTTAGATCAATCAC+TGG + chr1_1:52327371-52327390 None:intergenic 40.0%
TGAGGAGTTTGGATTCTTTC+AGG - chr1_1:52327439-52327458 Msa0027750:CDS 40.0%
AGTAAACATCTTGCATGGCT+TGG + chr1_1:52327674-52327693 None:intergenic 40.0%
CTGCTAGTAAACATCTTGCA+TGG + chr1_1:52327679-52327698 None:intergenic 40.0%
TAGGCATCCATGTTATCCTT+TGG - chr1_1:52327744-52327763 Msa0027750:intron 40.0%
!! CCGATTTTGATAACCTTGGT+TGG + chr1_1:52327906-52327925 None:intergenic 40.0%
!! AGTCCCGATTTTGATAACCT+TGG + chr1_1:52327910-52327929 None:intergenic 40.0%
GGACTTTACTTCAAGTCGAA+AGG - chr1_1:52327925-52327944 Msa0027750:intron 40.0%
TCGAAAGGGAGTAGCAAAAT+CGG - chr1_1:52327940-52327959 Msa0027750:intron 40.0%
TCGATGTAGGATAGCAAAGT+CGG - chr1_1:52328018-52328037 Msa0027750:intron 40.0%
CATAAATGTGGGAGAAGTGA+AGG - chr1_1:52328161-52328180 Msa0027750:intron 40.0%
ATCAAACTGCTACATGTGCA+AGG + chr1_1:52328568-52328587 None:intergenic 40.0%
!! TTTTAACAGAGAGCGTGTAG+GGG - chr1_1:52328600-52328619 Msa0027750:CDS 40.0%
CTCATGAATTTGATTGGGGA+AGG - chr1_1:52328658-52328677 Msa0027750:intron 40.0%
GTTGTGACTAATGCAAGTCA+AGG - chr1_1:52329754-52329773 Msa0027750:intron 40.0%
TGCAATTATCTGAAGGAGCT+AGG + chr1_1:52329801-52329820 None:intergenic 40.0%
TCTACGGTGCAATTATCTGA+AGG + chr1_1:52329808-52329827 None:intergenic 40.0%
TCATCGATGAAAGATTGTGC+TGG + chr1_1:52329832-52329851 None:intergenic 40.0%
TTGTAAGGTTTGCACATTGG+TGG + chr1_1:52329862-52329881 None:intergenic 40.0%
TTTCCACCAGAATCAAGACC+AGG - chr1_1:52327314-52327333 Msa0027750:CDS 45.0%
TTCCACCAGAATCAAGACCA+GGG - chr1_1:52327315-52327334 Msa0027750:CDS 45.0%
!! ACATTCCCTGGTCTTGATTC+TGG + chr1_1:52327323-52327342 None:intergenic 45.0%
ATCAAAGCTGCTGAGGAGTT+TGG - chr1_1:52327428-52327447 Msa0027750:CDS 45.0%
! ACATCTTGCATGGCTTGGAA+GGG + chr1_1:52327669-52327688 None:intergenic 45.0%
! AACATCTTGCATGGCTTGGA+AGG + chr1_1:52327670-52327689 None:intergenic 45.0%
ATCTATGGCGAGACAGTCTT+AGG - chr1_1:52327725-52327744 Msa0027750:intron 45.0%
CACTGCTCCAAAGGATAACA+TGG + chr1_1:52327754-52327773 None:intergenic 45.0%
!! CATGTTATCCTTTGGAGCAG+TGG - chr1_1:52327752-52327771 Msa0027750:intron 45.0%
AAATGTTGCCACTGCTCCAA+AGG + chr1_1:52327763-52327782 None:intergenic 45.0%
TGGAGCAGTGGCAACATTTA+TGG - chr1_1:52327764-52327783 Msa0027750:intron 45.0%
!! AAAGTTGGTATCCCCAACCA+AGG - chr1_1:52327890-52327909 Msa0027750:intron 45.0%
CGAAAGGGAGTAGCAAAATC+GGG - chr1_1:52327941-52327960 Msa0027750:intron 45.0%
CGATGTAGGATAGCAAAGTC+GGG - chr1_1:52328019-52328038 Msa0027750:intron 45.0%
TACGCAAAGTCGCAAAAACC+AGG - chr1_1:52328407-52328426 Msa0027750:CDS 45.0%
AATTTGATTGGGGAAGGGCT+TGG - chr1_1:52328664-52328683 Msa0027750:intron 45.0%
CCAATGCCAAACTTGGTTCA+GGG + chr1_1:52328762-52328781 None:intergenic 45.0%
CCTGAACCAAGTTTGGCATT+GGG - chr1_1:52328760-52328779 Msa0027750:intron 45.0%
CTCATTCCCAATGCCAAACT+TGG + chr1_1:52328769-52328788 None:intergenic 45.0%
! TGGAACATGGATTGCTCTTG+AGG - chr1_1:52328861-52328880 Msa0027750:intron 45.0%
TTAATAAGCGTACCTGCAGC+TGG + chr1_1:52328921-52328940 None:intergenic 45.0%
! GTGGTCACAACTTTTCGCTT+CGG - chr1_1:52329036-52329055 Msa0027750:intron 45.0%
!! AACTTGCTAGAGAGTTTGCC+AGG - chr1_1:52329409-52329428 Msa0027750:intron 45.0%
!! GAAAGATTGTGCTGGCTCTA+CGG + chr1_1:52329824-52329843 None:intergenic 45.0%
!! TCATTATATATAAATATAAA+TGG - chr1_1:52328941-52328960 Msa0027750:intron 5.0%
ACTATGCCATGCGAACCACA+TGG - chr1_1:52327107-52327126 Msa0027750:three_prime_UTR 50.0%
CTATGCCATGCGAACCACAT+GGG - chr1_1:52327108-52327127 Msa0027750:three_prime_UTR 50.0%
!! TTCCCTGGTCTTGATTCTGG+TGG + chr1_1:52327320-52327339 None:intergenic 50.0%
! GAAGGGCTTGGTTTGAAGTG+TGG - chr1_1:52328676-52328695 Msa0027750:intron 50.0%
!! AAACTTGGTTCAGGGCATCG+TGG + chr1_1:52328754-52328773 None:intergenic 50.0%
ACGATGCCCTGAACCAAGTT+TGG - chr1_1:52328753-52328772 Msa0027750:intron 50.0%
CCCTGAACCAAGTTTGGCAT+TGG - chr1_1:52328759-52328778 Msa0027750:intron 50.0%
CCCAATGCCAAACTTGGTTC+AGG + chr1_1:52328763-52328782 None:intergenic 50.0%
AAATGTAGGCTACCAGCTGC+AGG - chr1_1:52328906-52328925 Msa0027750:intron 50.0%
GAGTCGTTGATATTGGAGGG+TGG - chr1_1:52329017-52329036 Msa0027750:intron 50.0%
GCATACCCATGTGGTTCGCA+TGG + chr1_1:52327116-52327135 None:intergenic 55.0%
GCAAGTCAAGGTCGCACAAC+TGG - chr1_1:52329766-52329785 Msa0027750:intron 55.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 52327092 52330149 52327092 ID=Msa0027750;Name=Msa0027750
chr1_1 mRNA 52327092 52330149 52327092 ID=Msa0027750-mRNA-1;Parent=Msa0027750;Name=Msa0027750-mRNA-1;_AED=0.09;_eAED=0.09;_QI=162|1|1|1|1|1|4|183|342
chr1_1 exon 52327092 52327526 52327092 ID=Msa0027750-mRNA-1:exon:15367;Parent=Msa0027750-mRNA-1
chr1_1 exon 52328314 52328632 52328314 ID=Msa0027750-mRNA-1:exon:15366;Parent=Msa0027750-mRNA-1
chr1_1 exon 52329432 52329682 52329432 ID=Msa0027750-mRNA-1:exon:15365;Parent=Msa0027750-mRNA-1
chr1_1 exon 52329781 52330149 52329781 ID=Msa0027750-mRNA-1:exon:15364;Parent=Msa0027750-mRNA-1
chr1_1 five_prime_UTR 52329988 52330149 52329988 ID=Msa0027750-mRNA-1:five_prime_utr;Parent=Msa0027750-mRNA-1
chr1_1 CDS 52329781 52329987 52329781 ID=Msa0027750-mRNA-1:cds;Parent=Msa0027750-mRNA-1
chr1_1 CDS 52329432 52329682 52329432 ID=Msa0027750-mRNA-1:cds;Parent=Msa0027750-mRNA-1
chr1_1 CDS 52328314 52328632 52328314 ID=Msa0027750-mRNA-1:cds;Parent=Msa0027750-mRNA-1
chr1_1 CDS 52327275 52327526 52327275 ID=Msa0027750-mRNA-1:cds;Parent=Msa0027750-mRNA-1
chr1_1 three_prime_UTR 52327092 52327274 52327092 ID=Msa0027750-mRNA-1:three_prime_utr;Parent=Msa0027750-mRNA-1
Gene Sequence

>Msa0027750

ATGGAGAAACTTATTACAAATCGTTGGTCCAATATTCAATATGTCCCAGAGAACTATATATTTCCACCAGAATCAAGACCAGGGAATGTGAAAATCCCATTCAGTAATAGCATCCCAGTGATTGATCTAAGTGAAGCATGTAAGGGTGATAGAAGCAATATAATCAAGAAAATTATCAAAGCTGCTGAGGAGTTTGGATTCTTTCAGGTTATTAATCATGGGATTTCAATGGACCAAATGAAGGAAACAATGAGCATTTTTAAGGAGATTTTTAAGATGCCTGATGAGTACAGAAAAAACTTGTGTACTAACGACCCTTCCAAGCCATGCAAGATGTTTACTAGCAGTTTCAACTATGCAACTGAAAAGGTTCATCTATGGCGAGACAGTCTTAGGCATCCATGTTATCCTTTGGAGCAGTGGCAACATTTATGGCCTGAATATCCAACTAGATACAGAGAGCGTGTAGGGGATTTCTCAAACGAAGTTAAGGAATTAGGCTCAAGGCTCATGAATTTGATTGGGGAAGGGCTTGGTTTGAAGTGTGGATATTTTGACAATGATCTTACTGGATCAATGATTCTGTCAGTTAATCATTATCCACGATGCCCTGAACCAAGTTTGGCATTGGGAATGAGTAAACACTCAGATCCCAACCTAATCACCATTTTAATGCAAGATGATGTATCTGGTCTTCAAGTATTGAAAGATGGAACATGGATTGCTCTTGAGGCTCGTCCTTATGCCTTTATCATAAATGTAGGCTACCAGCTGCAGATAATCAGTAATGGTAAACTAAAAAGTGTAGAGCATAGAGTTGTGACTAATGCAAGTCAAGGTCGCACAACTGGTGCATTTTGCCTAGCTCCTTCAGATAATTGCACCGTAGAGCCAGCACAATCTTTCATCGATGAACACAATCCACCAATGTGCAAACCTTACAAATACAAGGATTTCAGTTCCCACTACTTTAACAAATATGGTGACACCGATGTAGTGCTTAAATCATTTGAGGCAACAAAGAATTAA
Protein sequence

>Msa0027750

MEKLITNRWSNIQYVPENYIFPPESRPGNVKIPFSNSIPVIDLSEACKGDRSNIIKKIIKAAEEFGFFQVINHGISMDQMKETMSIFKEIFKMPDEYRKNLCTNDPSKPCKMFTSSFNYATEKVHLWRDSLRHPCYPLEQWQHLWPEYPTRYRERVGDFSNEVKELGSRLMNLIGEGLGLKCGYFDNDLTGSMILSVNHYPRCPEPSLALGMSKHSDPNLITILMQDDVSGLQVLKDGTWIALEARPYAFIINVGYQLQIISNGKLKSVEHRVVTNASQGRTTGAFCLAPSDNCTVEPAQSFIDEHNPPMCKPYKYKDFSSHYFNKYGDTDVVLKSFEATKN*