AlfalfaGEDB | Msa0075480

M. sativa cultivar zhongmu-4 / Msa0075480

KEGG: -
GO: -
PFAM: PF14226.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0075480	XP_013468517.1	95.322	342	16	0	1	342	1	342	0.0	683

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0075480	sp\|P24397\|HY6H_HYONI	38.109	349	197	8	1	338	1	341	3.96e-82	256

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0075480	A0A072VKK8	95.322	342	16	0	1	342	1	342	0.0	683

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0016040	Msa0075480	0.806104	9.673634e-50	-8.615850e-47
Msa0027750	Msa0075480	0.865645	5.080041e-65	-8.615850e-47
Msa0029380	Msa0075480	0.801558	8.506542e-49	-8.615850e-47
Msa0065020	Msa0075480	0.813866	2.060439e-51	-8.615850e-47
Msa0075480	Msa0077560	0.809313	2.012826e-50	-8.615850e-47
Msa0075480	Msa0110200	0.809207	2.120669e-50	-8.615850e-47
Msa0075480	Msa0123350	0.891344	4.327510e-74	-8.615850e-47
Msa0075480	Msa0159620	0.804723	1.883717e-49	-8.615850e-47
Msa0075480	Msa0168200	0.949912	4.858015e-108	-8.615850e-47
Msa0075480	Msa0190730	0.803170	3.961737e-49	-8.615850e-47
Msa0075480	Msa0269210	0.813819	2.110647e-51	-8.615850e-47
Msa0075480	Msa0367150	0.823229	1.549941e-53	-8.615850e-47
Msa0075480	Msa0373500	0.829109	6.185787e-55	-8.615850e-47
Msa0075480	Msa0380490	0.806963	6.373905e-50	-8.615850e-47
Msa0075480	Msa0383000	0.819159	1.344102e-52	-8.615850e-47
Msa0075480	Msa0414880	0.804506	2.090492e-49	-8.615850e-47
Msa0075480	Msa0454560	0.837739	4.350379e-57	-8.615850e-47
Msa0075480	Msa0459740	0.824337	8.526767e-54	-8.615850e-47
Msa0075480	Msa0468620	0.823934	1.060293e-53	-8.615850e-47
Msa0075480	Msa0481890	0.823739	1.177534e-53	-8.615850e-47
Msa0075480	Msa0500570	0.802905	4.494012e-49	-8.615850e-47
Msa0075480	Msa0502510	0.834005	3.847836e-56	-8.615850e-47
Msa0075480	Msa0514500	0.824000	1.022876e-53	-8.615850e-47
Msa0075480	Msa0531960	0.814867	1.238051e-51	-8.615850e-47
Msa0075480	Msa0607800	0.812224	4.721988e-51	-8.615850e-47
Msa0075480	Msa0648040	0.810107	1.358427e-50	-8.615850e-47
Msa0075480	Msa0709440	0.823177	1.593919e-53	-8.615850e-47
Msa0075480	Msa0714520	0.813247	2.818754e-51	-8.615850e-47
Msa0075480	Msa0743440	0.803946	2.734021e-49	-8.615850e-47
Msa0075480	Msa0754450	0.805031	1.624660e-49	-8.615850e-47
Msa0075480	Msa0780910	0.801497	8.757271e-49	-8.615850e-47
Msa0075480	Msa0818150	0.800693	1.278791e-48	-8.615850e-47
Msa0075480	Msa0821160	0.803377	3.588625e-49	-8.615850e-47
Msa0075480	Msa0989370	0.813870	2.056105e-51	-8.615850e-47
Msa0075480	Msa1000780	0.801140	1.036329e-48	-8.615850e-47
Msa0075480	Msa1031410	0.807277	5.469024e-50	-8.615850e-47
Msa0075480	Msa1084530	0.827360	1.633003e-54	-8.615850e-47
Msa0075480	Msa1114630	0.831355	1.749897e-55	-8.615850e-47
Msa0075480	Msa1125820	0.824421	8.146549e-54	-8.615850e-47
Msa0075480	Msa1125990	0.822775	1.977451e-53	-8.615850e-47
Msa0075480	Msa1159590	0.832953	7.043090e-56	-8.615850e-47
Msa0075480	Msa1171290	0.825074	5.714900e-54	-8.615850e-47
Msa0075480	Msa1183740	0.834684	2.599391e-56	-8.615850e-47
Msa0075480	Msa1190390	0.813276	2.778271e-51	-8.615850e-47
Msa0075480	Msa1211920	0.815300	9.919601e-52	-8.615850e-47
Msa0075480	Msa1216590	0.833465	5.252321e-56	-8.615850e-47
Msa0075480	Msa1218820	0.800328	1.517468e-48	-8.615850e-47
Msa0075480	Msa1254540	0.829380	5.318521e-55	-8.615850e-47
Msa0075480	Msa1262850	0.823081	1.677916e-53	-8.615850e-47
Msa0075480	Msa1279120	0.802805	4.712813e-49	-8.615850e-47
Msa0075480	Msa1294460	0.811941	5.441210e-51	-8.615850e-47
Msa0075480	Msa1309090	0.811917	5.507776e-51	-8.615850e-47
Msa0075480	Msa1332950	0.800534	1.377864e-48	-8.615850e-47
Msa0075480	Msa1366150	0.820931	5.283449e-53	-8.615850e-47
Msa0075480	Msa1381470	0.806130	9.552245e-50	-8.615850e-47
Msa0075480	Msa1384150	0.828156	1.051470e-54	-8.615850e-47
Msa0075480	Msa1387440	0.842690	2.217088e-58	-8.615850e-47
Msa0075480	Msa1393560	0.801442	8.985754e-49	-8.615850e-47
Msa0075480	Msa1399190	0.814378	1.588317e-51	-8.615850e-47
Msa0075480	Msa1429070	0.816579	5.142495e-52	-8.615850e-47
Msa0075480	Msa1450190	0.815555	8.707949e-52	-8.615850e-47
Msa0075480	Msa1454010	0.800854	1.185261e-48	-8.615850e-47
Msa0075480	Msa1459010	0.801985	6.954053e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0075480	MtrunA17_Chr1g0184151	95.322	342	16	0	1	342	1	342	0.0	683
Msa0075480	MtrunA17_Chr1g0184161	78.947	342	72	0	1	342	1	342	0.0	586
Msa0075480	MtrunA17_Chr1g0184121	64.012	339	120	2	1	338	1	338	6.08e-171	479
Msa0075480	MtrunA17_Chr1g0184111	64.012	339	120	2	1	338	1	338	6.20e-168	471
Msa0075480	MtrunA17_Chr1g0184101	64.723	343	119	2	1	342	1	342	6.37e-168	471
Msa0075480	MtrunA17_Chr6g0455481	43.658	339	185	4	1	336	4	339	2.95e-102	304
Msa0075480	MtrunA17_Chr7g0220011	42.857	336	187	3	1	334	1	333	1.53e-99	297
Msa0075480	MtrunA17_Chr7g0220001	41.768	328	186	3	1	326	3	327	2.86e-93	281
Msa0075480	MtrunA17_Chr8g0345831	39.939	328	194	3	1	326	4	330	1.37e-83	256
Msa0075480	MtrunA17_Chr3g0128001	38.138	333	198	5	10	338	8	336	8.67e-80	247
Msa0075480	MtrunA17_Chr5g0412651	37.537	341	204	6	5	338	6	344	1.31e-73	231
Msa0075480	MtrunA17_Chr5g0412671	36.890	328	201	4	17	338	17	344	1.07e-72	229
Msa0075480	MtrunA17_Chr7g0250511	35.577	312	195	6	12	319	22	331	5.76e-68	217
Msa0075480	MtrunA17_Chr5g0412681	36.964	303	181	4	26	324	21	317	3.06e-67	214
Msa0075480	MtrunA17_Chr1g0184141	70.312	128	38	0	77	204	1	128	5.59e-65	201
Msa0075480	MtrunA17_Chr1g0179801	36.228	334	192	6	1	321	27	352	6.44e-64	207
Msa0075480	MtrunA17_Chr7g0242551	36.111	324	191	7	10	319	21	342	2.52e-63	205
Msa0075480	MtrunA17_Chr7g0265221	34.337	332	189	5	12	321	35	359	5.03e-61	200
Msa0075480	MtrunA17_Chr4g0006371	34.718	337	187	9	10	319	20	350	1.86e-60	198
Msa0075480	MtrunA17_Chr7g0225881	34.795	342	202	8	10	337	34	368	9.16e-59	194
Msa0075480	MtrunA17_Chr1g0162351	33.841	328	191	6	15	319	47	371	3.11e-56	187
Msa0075480	MtrunA17_Chr1g0162321	33.537	328	192	6	15	319	47	371	5.34e-56	187
Msa0075480	MtrunA17_Chr6g0472861	34.402	343	205	8	10	337	34	371	2.77e-55	184
Msa0075480	MtrunA17_Chr1g0162361	34.018	341	205	5	15	338	4	341	6.92e-54	180
Msa0075480	MtrunA17_Chr7g0239821	32.602	319	202	7	15	326	40	352	7.67e-54	181
Msa0075480	MtrunA17_Chr5g0437181	34.426	305	189	7	15	310	25	327	1.40e-53	180
Msa0075480	MtrunA17_Chr7g0239121	33.125	320	200	9	15	326	27	340	1.19e-52	177
Msa0075480	MtrunA17_Chr3g0113641	33.333	315	197	8	15	319	26	337	1.95e-52	177
Msa0075480	MtrunA17_Chr4g0050031	35.294	289	176	4	38	319	62	346	2.80e-52	176
Msa0075480	MtrunA17_Chr5g0426891	32.492	317	202	6	10	319	11	322	3.45e-52	176
Msa0075480	MtrunA17_Chr7g0239111	34.062	320	196	9	15	326	31	343	4.47e-52	176
Msa0075480	MtrunA17_Chr4g0045411	34.472	322	188	9	18	321	11	327	1.47e-51	174
Msa0075480	MtrunA17_Chr3g0109041	32.934	334	203	9	10	329	16	342	1.82e-51	174
Msa0075480	MtrunA17_Chr8g0336781	36.964	303	178	9	34	328	91	388	6.02e-51	174
Msa0075480	MtrunA17_Chr7g0239101	33.962	318	193	8	11	319	27	336	1.54e-50	172
Msa0075480	MtrunA17_Chr8g0336751	34.589	292	174	8	38	322	94	375	2.84e-50	172
Msa0075480	MtrunA17_Chr2g0296371	32.110	327	204	9	8	323	21	340	1.12e-49	169
Msa0075480	MtrunA17_Chr5g0405411	32.639	288	182	6	19	298	20	303	3.50e-49	168
Msa0075480	MtrunA17_Chr8g0348081	33.441	311	196	7	35	338	57	363	8.66e-49	167
Msa0075480	MtrunA17_Chr4g0045441	32.063	315	194	5	24	319	13	326	1.48e-48	166
Msa0075480	MtrunA17_Chr8g0336861	33.555	301	190	5	35	328	57	354	2.53e-48	166
Msa0075480	MtrunA17_Chr8g0375571	30.240	334	225	5	15	342	22	353	4.09e-48	165
Msa0075480	MtrunA17_Chr3g0126741	33.223	301	182	7	29	319	50	341	5.88e-48	165
Msa0075480	MtrunA17_Chr2g0311741	34.237	295	184	6	37	326	26	315	1.14e-47	163
Msa0075480	MtrunA17_Chr2g0311831	33.657	309	191	8	38	338	68	370	1.21e-47	164
Msa0075480	MtrunA17_Chr8g0371931	31.615	291	183	6	18	298	19	303	2.02e-47	164
Msa0075480	MtrunA17_Chr2g0311921	33.546	313	189	8	38	339	54	358	3.11e-47	163
Msa0075480	MtrunA17_Chr8g0375671	30.818	318	212	5	15	326	29	344	3.29e-47	163
Msa0075480	MtrunA17_Chr8g0336761	33.758	314	190	9	26	328	46	352	5.11e-47	162
Msa0075480	MtrunA17_Chr4g0045431	33.939	330	187	11	24	330	13	334	9.06e-47	162
Msa0075480	MtrunA17_Chr1g0184241	33.333	306	190	7	10	309	40	337	9.18e-47	162
Msa0075480	MtrunA17_Chr2g0311761	34.516	310	188	9	38	338	68	371	1.60e-46	162
Msa0075480	MtrunA17_Chr5g0398291	28.783	337	221	9	10	331	14	346	1.62e-46	161
Msa0075480	MtrunA17_Chr8g0336851	32.797	311	198	6	35	338	57	363	1.81e-46	161
Msa0075480	MtrunA17_Chr3g0102041	30.539	334	210	8	25	341	26	354	2.52e-46	160
Msa0075480	MtrunA17_Chr8g0354241	34.295	312	188	7	37	337	67	372	3.18e-46	161
Msa0075480	MtrunA17_Chr8g0371921	29.446	343	216	8	18	341	19	354	4.26e-46	160
Msa0075480	MtrunA17_Chr8g0354261	32.647	340	211	8	10	337	39	372	5.32e-46	160
Msa0075480	MtrunA17_Chr3g0114861	30.530	321	215	3	10	326	12	328	5.69e-46	159
Msa0075480	MtrunA17_Chr5g0424201	29.352	293	200	3	38	326	44	333	7.28e-46	159
Msa0075480	MtrunA17_Chr8g0336631	32.523	329	196	9	26	338	46	364	1.32e-45	159
Msa0075480	MtrunA17_Chr4g0045471	32.544	338	193	10	12	322	1	330	3.65e-45	157
Msa0075480	MtrunA17_Chr1g0187821	33.010	309	193	6	37	337	66	368	4.78e-45	157
Msa0075480	MtrunA17_Chr2g0311861	34.091	308	171	8	38	338	64	346	1.65e-44	155
Msa0075480	MtrunA17_Chr5g0424211	32.509	283	174	6	37	309	41	316	2.07e-44	155
Msa0075480	MtrunA17_Chr7g0239071	34.766	256	160	5	68	319	29	281	2.78e-44	154
Msa0075480	MtrunA17_Chr4g0045451	32.615	325	185	11	24	322	13	329	3.43e-44	155
Msa0075480	MtrunA17_Chr8g0364471	30.645	310	202	5	37	337	66	371	6.84e-44	155
Msa0075480	MtrunA17_Chr8g0375701	29.968	317	212	8	15	326	31	342	7.60e-44	154
Msa0075480	MtrunA17_Chr2g0311701	32.107	299	187	6	37	324	68	361	8.64e-44	154
Msa0075480	MtrunA17_Chr3g0121141	31.973	294	184	6	36	323	2	285	1.05e-43	152
Msa0075480	MtrunA17_Chr2g0311711	32.131	305	178	8	37	325	66	357	1.18e-43	154
Msa0075480	MtrunA17_Chr3g0093741	31.003	329	208	7	11	329	25	344	1.44e-43	153
Msa0075480	MtrunA17_Chr1g0187811	30.994	342	217	8	12	338	155	492	2.02e-43	156
Msa0075480	MtrunA17_Chr7g0235951	31.731	312	198	7	37	338	66	372	2.17e-43	153
Msa0075480	MtrunA17_Chr8g0365241	30.395	329	202	9	12	326	31	346	2.79e-43	153
Msa0075480	MtrunA17_Chr3g0093751	30.699	329	209	7	11	329	25	344	3.49e-43	152
Msa0075480	MtrunA17_Chr2g0311681	33.010	309	172	8	37	327	62	353	3.85e-43	152
Msa0075480	MtrunA17_Chr4g0066121	30.921	304	198	6	26	320	46	346	4.35e-43	152
Msa0075480	MtrunA17_Chr3g0125201	32.333	300	179	9	37	323	2	290	4.87e-43	150
Msa0075480	MtrunA17_Chr8g0375601	30.240	334	213	9	15	337	22	346	5.11e-43	152
Msa0075480	MtrunA17_Chr1g0167911	31.269	323	211	6	10	326	26	343	6.23e-43	152
Msa0075480	MtrunA17_Chr4g0068891	30.619	307	194	7	38	334	20	317	7.45e-43	150
Msa0075480	MtrunA17_Chr3g0093761	30.395	329	209	7	11	329	25	343	1.53e-42	150
Msa0075480	MtrunA17_Chr2g0314401	30.699	329	208	9	12	329	25	344	1.79e-42	150
Msa0075480	MtrunA17_Chr1g0161041	32.229	332	201	9	10	329	66	385	3.87e-42	150
Msa0075480	MtrunA17_Chr2g0311691	33.010	309	172	9	37	327	62	353	4.46e-42	150
Msa0075480	MtrunA17_Chr1g0162191	32.646	291	180	7	38	319	47	330	9.53e-42	149
Msa0075480	MtrunA17_Chr1g0187831	30.844	308	202	5	37	337	69	372	1.14e-41	149
Msa0075480	MtrunA17_Chr2g0314381	28.308	325	219	6	10	326	49	367	1.44e-41	149
Msa0075480	MtrunA17_Chr5g0423201	30.068	296	194	8	38	326	47	336	1.88e-41	148
Msa0075480	MtrunA17_Chr4g0055591	29.293	297	195	6	37	326	60	348	2.32e-41	148
Msa0075480	MtrunA17_Chr5g0423221	30.061	326	213	8	12	329	45	363	3.35e-41	148
Msa0075480	MtrunA17_Chr2g0289341	31.650	297	183	9	37	324	3	288	5.33e-41	145
Msa0075480	MtrunA17_Chr5g0421011	29.102	323	215	7	11	326	20	335	1.31e-40	145
Msa0075480	MtrunA17_Chr1g0161111	31.940	335	214	8	10	337	102	429	1.36e-40	147
Msa0075480	MtrunA17_Chr5g0420981	29.766	299	191	7	38	326	53	342	1.52e-40	145
Msa0075480	MtrunA17_Chr5g0420951	29.667	300	196	6	35	326	50	342	1.73e-40	145
Msa0075480	MtrunA17_Chr5g0439011	30.797	276	176	5	37	306	4	270	1.95e-40	144
Msa0075480	MtrunA17_Chr2g0332191	28.399	331	213	8	10	326	23	343	1.98e-40	145
Msa0075480	MtrunA17_Chr2g0311631	29.518	332	204	7	10	324	28	346	2.37e-40	145
Msa0075480	MtrunA17_Chr7g0266651	29.179	329	220	7	10	330	30	353	4.52e-40	144
Msa0075480	MtrunA17_Chr5g0420941	27.515	338	229	7	12	341	19	348	1.37e-39	143
Msa0075480	MtrunA17_Chr7g0232161	33.910	289	174	10	15	297	36	313	1.51e-39	142
Msa0075480	MtrunA17_Chr1g0167951	32.468	308	188	11	10	307	26	323	1.79e-39	142
Msa0075480	MtrunA17_Chr4g0064781	30.159	315	197	7	38	342	50	351	1.81e-39	142
Msa0075480	MtrunA17_Chr1g0184131	44.375	160	47	1	225	342	1	160	2.24e-39	137
Msa0075480	MtrunA17_Chr7g0239091	31.447	318	195	10	15	325	136	437	3.59e-39	144
Msa0075480	MtrunA17_Chr1g0167961	31.353	303	188	8	35	326	66	359	5.04e-39	142
Msa0075480	MtrunA17_Chr5g0423251	29.688	320	209	9	15	326	24	335	6.01e-39	141
Msa0075480	MtrunA17_Chr5g0421041	30.581	327	203	11	11	326	20	333	6.60e-39	141
Msa0075480	MtrunA17_Chr1g0191201	28.698	338	218	7	15	337	33	362	7.01e-39	141
Msa0075480	MtrunA17_Chr8g0370711	30.169	295	197	6	38	327	52	342	7.10e-39	141
Msa0075480	MtrunA17_Chr5g0420901	29.595	321	210	7	12	324	20	332	7.64e-39	141
Msa0075480	MtrunA17_Chr1g0161081	31.193	327	211	8	10	329	43	362	9.41e-39	141
Msa0075480	MtrunA17_Chr5g0423191	28.972	321	210	9	15	326	24	335	1.11e-38	140
Msa0075480	MtrunA17_Chr2g0314391	28.000	325	216	8	12	326	44	360	1.29e-38	141
Msa0075480	MtrunA17_Chr5g0421091	27.760	317	222	5	12	324	19	332	1.40e-38	140
Msa0075480	MtrunA17_Chr3g0087031	28.571	336	212	9	13	333	33	355	2.23e-38	140
Msa0075480	MtrunA17_Chr7g0265351	31.561	301	187	8	37	329	38	327	3.08e-38	139
Msa0075480	MtrunA17_Chr2g0319491	30.584	291	181	8	38	322	33	308	4.73e-38	138
Msa0075480	MtrunA17_Chr3g0145171	28.814	295	202	7	38	326	52	344	1.94e-37	137
Msa0075480	MtrunA17_Chr1g0167931	28.704	324	180	6	10	326	26	305	3.34e-37	135
Msa0075480	MtrunA17_Chr7g0236011	30.696	316	196	6	37	338	66	372	6.47e-37	136
Msa0075480	MtrunA17_Chr3g0145181	28.571	294	199	6	32	315	40	332	1.34e-36	135
Msa0075480	MtrunA17_Chr8g0351101	29.221	308	203	7	12	308	30	333	1.50e-36	135
Msa0075480	MtrunA17_Chr1g0204181	28.931	318	205	8	15	320	38	346	1.55e-36	135
Msa0075480	MtrunA17_Chr1g0194321	29.375	320	185	9	38	330	20	325	3.09e-36	134
Msa0075480	MtrunA17_Chr3g0125421	29.191	346	208	9	14	337	15	345	3.31e-36	134
Msa0075480	MtrunA17_Chr8g0375681	29.348	276	188	5	70	341	15	287	6.72e-36	131
Msa0075480	MtrunA17_Chr3g0092531	30.000	290	187	5	38	319	6	287	7.38e-36	132
Msa0075480	MtrunA17_Chr8g0335411	30.872	298	191	7	37	324	66	358	8.92e-36	133
Msa0075480	MtrunA17_Chr5g0421101	28.086	324	215	9	12	326	21	335	1.06e-35	132
Msa0075480	MtrunA17_Chr3g0114871	29.889	271	173	7	1	260	1	265	1.24e-35	130
Msa0075480	MtrunA17_Chr5g0423211	29.358	327	207	11	12	325	21	336	3.97e-35	131
Msa0075480	MtrunA17_Chr8g0358941	29.305	331	194	11	34	342	23	335	5.01e-35	130
Msa0075480	MtrunA17_Chr4g0011311	31.197	234	153	6	37	266	66	295	5.71e-35	129
Msa0075480	MtrunA17_Chr8g0370721	28.105	306	211	7	38	338	52	353	6.05e-35	130
Msa0075480	MtrunA17_Chr7g0235981	30.325	277	181	4	72	341	58	329	1.57e-34	129
Msa0075480	MtrunA17_Chr2g0313111	28.710	310	190	9	34	329	24	316	5.40e-34	127
Msa0075480	MtrunA17_Chr4g0045461	29.032	310	200	6	35	325	23	331	9.21e-34	127
Msa0075480	MtrunA17_Chr3g0145201	28.679	265	184	4	55	315	704	967	1.80e-33	131
Msa0075480	MtrunA17_Chr4g0066991	30.547	311	183	7	37	338	66	352	2.81e-33	126
Msa0075480	MtrunA17_Chr7g0247991	30.449	312	202	7	37	338	66	372	2.86e-33	126
Msa0075480	MtrunA17_Chr2g0285931	25.610	328	205	8	18	325	11	319	3.48e-33	125
Msa0075480	MtrunA17_Chr6g0474391	28.931	318	205	9	15	320	43	351	6.56e-32	123
Msa0075480	MtrunA17_Chr3g0130391	27.964	329	212	8	6	320	36	353	1.33e-31	122
Msa0075480	MtrunA17_Chr5g0394071	37.576	165	96	2	156	319	5	163	1.20e-30	114
Msa0075480	MtrunA17_Chr8g0362741	32.301	226	133	7	37	260	66	273	2.45e-30	116
Msa0075480	MtrunA17_Chr1g0148771	26.621	293	185	7	38	319	63	336	8.89e-30	117
Msa0075480	MtrunA17_Chr7g0219991	39.103	156	89	3	1	153	1	153	1.33e-29	116
Msa0075480	MtrunA17_Chr7g0219991	46.364	110	58	1	150	258	245	354	1.98e-27	110
Msa0075480	MtrunA17_Chr5g0420721	30.159	189	124	4	143	326	52	237	4.19e-29	112
Msa0075480	MtrunA17_Chr4g0004061	26.557	305	205	8	38	331	9	305	9.27e-29	113
Msa0075480	MtrunA17_Chr8g0389941	30.721	319	192	10	31	326	26	338	3.01e-28	112
Msa0075480	MtrunA17_Chr1g0170631	37.209	172	100	5	153	319	3	171	3.20e-28	108
Msa0075480	MtrunA17_Chr1g0170641	35.862	145	88	4	11	153	20	161	3.43e-28	107
Msa0075480	MtrunA17_Chr7g0233661	40.385	156	81	2	178	332	1	145	6.48e-28	107
Msa0075480	MtrunA17_Chr4g0004071	24.837	306	214	5	35	331	6	304	1.30e-27	110
Msa0075480	MtrunA17_Chr2g0293931	33.854	192	114	5	156	334	10	201	1.60e-27	107
Msa0075480	MtrunA17_Chr8g0384461	25.228	329	215	9	15	327	26	339	1.90e-27	110
Msa0075480	MtrunA17_Chr6g0486831	29.969	327	196	10	40	342	23	340	8.02e-27	108
Msa0075480	MtrunA17_Chr4g0052251	25.874	286	183	7	58	324	43	318	7.86e-26	105
Msa0075480	MtrunA17_Chr3g0126761	32.353	170	111	2	153	319	44	212	4.21e-25	101
Msa0075480	MtrunA17_Chr8g0384481	25.633	316	218	7	15	319	38	347	4.48e-25	104
Msa0075480	MtrunA17_Chr2g0314371	27.333	300	178	9	12	280	26	316	5.75e-25	103
Msa0075480	MtrunA17_Chr8g0336801	33.766	154	99	1	188	338	2	155	6.55e-25	98.6
Msa0075480	MtrunA17_Chr6g0488511	27.134	328	186	13	37	342	2	298	1.73e-24	101
Msa0075480	MtrunA17_Chr4g0075471	37.398	123	76	1	184	305	16	138	7.06e-24	96.3
Msa0075480	MtrunA17_Chr7g0247741	27.083	288	198	6	38	319	11	292	8.92e-24	99.8
Msa0075480	MtrunA17_Chr8g0348951	26.552	290	198	7	38	319	10	292	1.51e-23	99.0
Msa0075480	MtrunA17_Chr5g0420881	34.884	129	83	1	197	324	1	129	2.74e-23	94.4
Msa0075480	MtrunA17_Chr4g0055911	28.349	321	204	10	37	339	8	320	6.24e-23	97.4
Msa0075480	MtrunA17_Chr8g0336831	33.511	188	116	6	35	217	57	240	1.60e-22	94.7
Msa0075480	MtrunA17_Chr4g0037611	38.760	129	77	2	165	291	3	131	2.15e-22	92.8
Msa0075480	MtrunA17_Chr3g0105281	26.316	304	190	9	29	322	25	304	2.55e-22	95.9
Msa0075480	MtrunA17_Chr4g0053251	26.552	290	188	8	36	302	6	293	9.04e-22	94.4
Msa0075480	MtrunA17_Chr8g0336871	32.738	168	103	3	166	329	3	164	1.26e-21	90.5
Msa0075480	MtrunA17_Chr3g0138351	22.903	310	220	9	38	333	7	311	5.18e-20	89.4
Msa0075480	MtrunA17_Chr1g0158011	26.939	245	155	7	93	318	1	240	6.86e-20	87.8
Msa0075480	MtrunA17_Chr4g0009561	23.920	301	212	9	36	323	5	301	8.90e-20	88.6
Msa0075480	MtrunA17_Chr2g0319521	34.545	110	71	1	152	260	15	124	4.46e-19	82.4
Msa0075480	MtrunA17_Chr8g0364171	34.454	119	76	2	153	269	18	136	4.55e-19	82.4
Msa0075480	MtrunA17_Chr4g0009541	24.315	292	203	10	40	323	17	298	5.03e-19	86.3
Msa0075480	MtrunA17_Chr7g0256741	30.000	180	111	5	142	313	115	287	6.38e-19	86.3
Msa0075480	MtrunA17_Chr4g0064771	34.940	166	103	3	154	315	27	191	1.13e-18	83.2
Msa0075480	MtrunA17_Chr4g0055871	25.753	299	202	7	38	324	9	299	1.88e-18	84.7
Msa0075480	MtrunA17_Chr3g0092581	29.193	161	108	3	163	319	1	159	2.87e-18	81.6
Msa0075480	MtrunA17_Chr1g0167921	37.864	103	63	1	158	259	54	156	1.60e-16	76.3
Msa0075480	MtrunA17_Chr5g0407731	24.013	304	208	11	34	329	29	317	3.07e-16	78.6
Msa0075480	MtrunA17_Chr8g0375581	48.485	66	33	1	191	255	19	84	1.33e-15	71.2
Msa0075480	MtrunA17_Chr2g0311611	40.845	71	35	1	197	260	1	71	6.51e-13	63.2
Msa0075480	MtrunA17_Chr1g0158021	24.675	231	140	7	38	252	49	261	9.34e-13	67.4
Msa0075480	MtrunA17_Chr1g0161101	38.824	85	43	1	194	278	403	478	2.05e-12	67.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0075480	AT5G24530.1	39.939	328	188	5	15	337	15	338	8.42e-79	244
Msa0075480	AT4G10490.1	36.950	341	210	4	4	340	7	346	1.52e-78	244
Msa0075480	AT4G10500.1	34.503	342	220	4	1	339	6	346	6.64e-74	232
Msa0075480	AT5G05600.1	37.037	324	183	9	10	319	33	349	5.98e-62	202
Msa0075480	AT2G44800.1	34.524	336	209	7	10	336	22	355	4.62e-61	199
Msa0075480	AT2G36690.2	35.762	302	185	5	15	308	32	332	2.21e-60	198
Msa0075480	AT2G36690.1	35.762	302	185	5	15	308	32	332	2.21e-60	198
Msa0075480	AT3G60290.1	35.691	311	193	6	14	319	26	334	2.72e-59	195
Msa0075480	AT3G11180.1	35.938	320	192	7	10	319	62	378	2.80e-59	196
Msa0075480	AT3G11180.2	35.938	320	192	7	10	319	62	378	2.89e-59	196
Msa0075480	AT5G07480.1	31.661	319	203	6	11	319	20	333	4.39e-59	194
Msa0075480	AT5G08640.2	33.333	294	189	3	37	326	42	332	1.89e-57	189
Msa0075480	AT5G08640.1	33.333	294	189	3	37	326	42	332	1.89e-57	189
Msa0075480	AT1G55290.1	34.049	326	203	5	10	329	32	351	3.59e-56	187
Msa0075480	AT3G55970.1	34.535	333	192	10	10	327	20	341	2.03e-54	182
Msa0075480	AT3G21420.1	36.877	301	174	8	36	325	53	348	1.76e-53	180
Msa0075480	AT2G38240.1	32.012	328	195	8	10	321	18	333	2.14e-53	179
Msa0075480	AT1G06620.1	34.969	326	197	9	10	326	33	352	3.65e-53	179
Msa0075480	AT5G59530.1	32.738	336	215	8	10	337	30	362	1.39e-50	172
Msa0075480	AT5G63590.1	32.414	290	188	4	35	319	11	297	5.18e-50	169
Msa0075480	AT3G13610.1	30.462	325	215	5	10	329	33	351	8.78e-50	170
Msa0075480	AT1G06645.1	33.546	313	187	9	37	338	76	378	4.39e-49	169
Msa0075480	AT3G19000.1	34.545	330	182	9	17	319	6	328	1.29e-48	167
Msa0075480	AT3G19010.1	34.062	320	188	9	19	319	8	323	3.07e-48	166
Msa0075480	AT3G19010.4	34.062	320	188	9	19	319	8	323	3.07e-48	166
Msa0075480	AT2G30830.1	33.333	297	185	7	38	326	54	345	1.82e-46	161
Msa0075480	AT1G06650.2	34.106	302	182	9	37	328	63	357	2.42e-46	161
Msa0075480	AT3G51240.1	30.208	288	189	6	19	298	19	302	6.00e-46	160
Msa0075480	AT5G12270.1	31.250	336	217	8	11	338	29	358	8.71e-46	160
Msa0075480	AT5G59540.1	31.773	299	194	6	38	329	61	356	1.17e-45	159
Msa0075480	AT5G43440.1	33.639	327	186	11	10	320	30	341	1.63e-45	159
Msa0075480	AT1G03410.2	33.739	329	194	11	10	325	26	343	3.25e-45	158
Msa0075480	AT4G16330.2	33.221	298	183	8	35	326	64	351	4.98e-45	158
Msa0075480	AT1G77330.1	31.561	301	185	7	37	326	2	292	5.62e-45	156
Msa0075480	AT1G03410.1	33.739	329	194	11	10	325	63	380	7.93e-45	158
Msa0075480	AT1G04350.1	32.353	340	211	12	10	338	28	359	9.71e-45	157
Msa0075480	AT3G61400.1	30.612	343	215	8	10	335	31	367	1.15e-44	157
Msa0075480	AT2G30840.1	32.484	314	190	9	38	338	57	361	1.19e-44	157
Msa0075480	AT5G63600.1	29.097	299	199	5	38	332	33	322	1.44e-44	155
Msa0075480	AT3G12900.1	32.407	324	210	7	10	329	28	346	1.76e-44	156
Msa0075480	AT1G06640.1	33.876	307	176	11	37	328	63	357	2.53e-44	156
Msa0075480	AT5G05600.2	36.981	265	146	9	10	260	33	290	2.66e-44	154
Msa0075480	AT4G25300.1	31.457	302	198	7	34	329	48	346	4.83e-44	155
Msa0075480	AT1G17020.1	30.065	306	206	6	38	337	53	356	6.23e-44	155
Msa0075480	AT1G06620.2	37.109	256	149	8	10	259	33	282	6.83e-44	152
Msa0075480	AT5G63600.2	29.000	300	199	6	38	332	33	323	1.22e-43	153
Msa0075480	AT4G22880.1	27.356	329	222	7	10	322	13	340	2.74e-43	153
Msa0075480	AT4G22880.2	27.356	329	222	7	10	322	13	340	2.74e-43	153
Msa0075480	AT4G22880.3	27.356	329	222	7	10	322	13	340	2.74e-43	153
Msa0075480	AT1G04380.1	32.492	317	202	9	15	326	23	332	2.80e-43	153
Msa0075480	AT1G03400.1	30.769	299	192	7	37	330	55	343	5.97e-43	152
Msa0075480	AT1G78550.1	30.000	300	198	8	34	326	49	343	9.55e-43	152
Msa0075480	AT5G43450.1	33.663	303	181	10	25	320	49	338	1.14e-42	152
Msa0075480	AT2G25450.1	32.450	302	179	8	38	327	55	343	4.97e-42	150
Msa0075480	AT3G55970.2	35.338	266	154	9	10	260	20	282	5.97e-42	148
Msa0075480	AT4G21200.1	33.564	289	153	7	31	297	26	297	9.09e-42	149
Msa0075480	AT2G30840.3	32.026	306	182	9	38	330	57	349	2.85e-41	148
Msa0075480	AT1G17010.1	30.333	300	194	7	36	326	52	345	4.21e-41	147
Msa0075480	AT4G25310.1	30.769	286	185	6	55	334	70	348	6.51e-41	147
Msa0075480	AT1G05010.1	31.636	275	170	7	37	303	3	267	7.30e-41	146
Msa0075480	AT1G15550.1	27.778	306	191	7	37	326	56	347	2.82e-40	145
Msa0075480	AT3G19010.3	31.661	319	167	9	19	319	8	293	3.02e-40	144
Msa0075480	AT1G62380.1	32.353	272	171	6	39	305	8	271	2.66e-39	142
Msa0075480	AT5G51810.1	30.368	326	199	10	15	327	42	352	2.69e-39	143
Msa0075480	AT1G12010.1	30.892	314	190	9	39	342	8	304	2.89e-39	141
Msa0075480	AT5G20400.1	32.012	328	198	12	15	327	19	336	7.95e-39	141
Msa0075480	AT5G63595.1	29.348	276	171	5	22	296	10	262	9.44e-39	139
Msa0075480	AT1G49390.1	30.154	325	213	9	13	326	17	338	1.08e-38	140
Msa0075480	AT5G07200.1	27.811	338	204	8	13	327	35	355	1.11e-38	141
Msa0075480	AT4G16330.1	36.453	203	121	4	127	326	48	245	1.76e-38	138
Msa0075480	AT1G80330.1	27.299	348	203	10	2	319	6	333	2.38e-38	140
Msa0075480	AT1G03400.2	28.135	327	192	8	37	330	55	371	5.80e-38	139
Msa0075480	AT5G07480.2	32.000	225	143	4	103	319	2	224	1.24e-37	135
Msa0075480	AT5G43440.2	33.588	262	153	7	10	259	30	282	1.89e-37	136
Msa0075480	AT3G19000.2	33.333	279	152	9	17	268	6	277	4.32e-37	135
Msa0075480	AT5G63580.2	31.602	231	149	4	34	260	15	240	1.48e-36	132
Msa0075480	AT1G60980.1	29.747	316	193	8	14	309	35	341	2.37e-36	135
Msa0075480	AT5G20550.1	31.173	324	204	12	15	324	19	337	2.62e-36	134
Msa0075480	AT1G30040.1	27.129	317	198	8	30	329	23	323	3.98e-36	134
Msa0075480	AT5G63580.1	31.878	229	147	4	34	258	15	238	4.24e-36	131
Msa0075480	AT5G54000.2	29.102	323	211	10	15	323	19	337	2.75e-35	132
Msa0075480	AT1G78550.2	28.947	266	178	7	67	326	5	265	2.99e-35	130
Msa0075480	AT4G25420.1	28.529	333	200	10	15	327	40	354	1.20e-34	130
Msa0075480	AT1G06650.1	33.906	233	136	6	37	260	63	286	1.92e-34	129
Msa0075480	AT2G34555.1	27.922	308	190	8	38	329	27	318	3.08e-34	129
Msa0075480	AT5G59540.2	31.466	232	142	6	38	260	61	284	4.58e-34	127
Msa0075480	AT1G78440.1	28.012	332	197	10	30	338	8	320	5.81e-34	127
Msa0075480	AT2G30840.2	34.361	227	140	5	38	259	57	279	6.70e-34	127
Msa0075480	AT1G80340.1	24.051	316	225	5	11	319	23	330	8.18e-34	127
Msa0075480	AT1G06640.2	34.188	234	132	7	37	259	63	285	1.25e-33	127
Msa0075480	AT1G06640.3	33.913	230	130	7	37	255	63	281	3.03e-33	125
Msa0075480	AT4G21690.1	26.087	345	217	13	2	326	16	342	4.33e-33	125
Msa0075480	AT5G43935.1	28.125	288	185	8	34	319	15	282	7.39e-33	124
Msa0075480	AT3G19010.2	32.171	258	160	5	19	261	8	265	9.81e-33	124
Msa0075480	AT5G43450.2	32.245	245	142	8	25	259	49	279	1.03e-32	123
Msa0075480	AT1G04380.2	32.400	250	160	7	15	262	23	265	1.92e-32	122
Msa0075480	AT3G51240.2	32.292	192	122	4	113	298	29	218	6.58e-32	121
Msa0075480	AT3G61400.2	30.682	264	164	7	10	260	31	288	1.11e-31	120
Msa0075480	AT1G02400.1	29.470	302	179	11	37	319	23	309	7.29e-31	119
Msa0075480	AT1G47990.1	27.907	301	173	9	32	309	9	288	1.73e-30	118
Msa0075480	AT1G49390.2	28.736	261	179	6	71	326	1	259	2.18e-30	117
Msa0075480	AT5G54000.1	29.615	260	173	7	71	323	1	257	5.25e-30	115
Msa0075480	AT1G44090.1	28.105	306	193	8	38	327	63	357	1.29e-29	117
Msa0075480	AT5G51810.2	30.153	262	160	9	15	263	42	293	2.16e-29	115
Msa0075480	AT2G19590.1	28.616	318	192	11	38	342	11	306	1.32e-27	110
Msa0075480	AT4G25310.2	27.915	283	169	7	55	334	70	320	1.78e-27	110
Msa0075480	AT1G50960.1	26.861	309	186	8	38	332	40	322	3.21e-27	109
Msa0075480	AT4G25300.2	32.447	188	120	4	152	334	72	257	4.39e-26	105
Msa0075480	AT1G30040.2	27.126	247	148	7	30	260	23	253	1.03e-24	101
Msa0075480	AT4G25420.2	28.736	261	153	9	15	255	40	287	1.44e-24	101
Msa0075480	AT1G52800.1	25.402	311	218	7	35	337	7	311	3.34e-23	98.6
Msa0075480	AT4G03070.1	26.899	316	185	14	35	325	11	305	1.30e-22	97.1
Msa0075480	AT1G52820.1	24.542	273	200	4	58	328	36	304	3.36e-22	95.5
Msa0075480	AT1G02400.2	29.218	243	139	9	39	263	25	252	4.97e-22	94.4
Msa0075480	AT3G50210.4	24.765	319	211	8	37	326	7	325	5.79e-22	95.1
Msa0075480	AT3G50210.1	24.765	319	211	8	37	326	7	325	5.79e-22	95.1
Msa0075480	AT3G50210.3	24.765	319	211	8	37	326	7	325	5.79e-22	95.1
Msa0075480	AT2G19590.2	30.097	206	127	6	146	342	94	291	6.84e-22	94.4
Msa0075480	AT1G14130.1	28.425	292	178	10	38	317	9	281	4.04e-21	92.4
Msa0075480	AT3G49620.1	26.316	304	184	9	34	306	30	324	9.36e-21	92.4
Msa0075480	AT4G23340.1	27.500	320	210	8	35	341	7	317	1.78e-20	90.9
Msa0075480	AT3G49630.1	24.918	305	187	10	34	306	5	299	2.00e-20	90.9
Msa0075480	AT1G14120.2	28.169	284	181	10	38	313	8	276	2.67e-19	87.4
Msa0075480	AT1G14120.1	28.169	284	181	10	38	313	8	276	2.67e-19	87.4
Msa0075480	AT1G14120.3	28.169	284	181	10	38	313	8	276	2.67e-19	87.4
Msa0075480	AT3G46500.5	26.168	321	208	11	36	338	15	324	2.76e-19	87.8
Msa0075480	AT3G49630.3	24.042	287	186	8	42	306	19	295	8.01e-19	86.3
Msa0075480	AT3G46490.1	26.888	331	191	13	30	322	9	326	9.20e-19	86.3
Msa0075480	AT3G47190.1	24.556	338	185	14	21	322	7	310	1.15e-17	83.2
Msa0075480	AT3G46500.10	29.208	202	130	6	146	338	53	250	4.29e-16	77.4
Msa0075480	AT3G46500.1	29.208	202	130	6	146	338	53	250	4.29e-16	77.4
Msa0075480	AT3G46500.4	30.688	189	118	6	159	338	4	188	5.06e-16	75.9
Msa0075480	AT1G28030.1	24.667	300	198	11	37	319	12	300	1.99e-15	76.6
Msa0075480	AT3G46490.2	26.644	289	169	11	30	288	9	284	4.78e-15	75.1
Msa0075480	AT5G58660.1	23.659	317	187	12	38	322	34	327	9.24e-15	74.7
Msa0075480	AT5G51310.1	26.909	275	166	12	35	289	2	261	1.17e-14	74.3
Msa0075480	AT2G06960.1	30.882	136	80	3	191	326	24	145	1.28e-14	70.9
Msa0075480	AT3G50210.2	27.083	192	130	5	145	326	52	243	2.42e-14	72.4
Msa0075480	AT4G16765.6	27.723	202	127	7	139	325	44	241	5.47e-14	71.2
Msa0075480	AT4G16765.1	27.723	202	127	7	139	325	44	241	5.47e-14	71.2
Msa0075480	AT4G16765.2	27.723	202	127	7	139	325	44	241	5.47e-14	71.2
Msa0075480	AT4G23340.2	30.986	142	93	2	205	341	58	199	1.91e-13	68.9
Msa0075480	AT3G49630.2	27.059	170	111	4	145	306	62	226	2.91e-13	69.3
Msa0075480	AT4G22870.1	30.526	95	65	1	229	322	2	96	1.36e-11	61.2
Msa0075480	AT1G52820.2	23.902	205	150	4	58	260	36	236	7.31e-11	62.4

Find 93 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAGGAGTTTGGATTCTTTC+AGG	0.143451	1_2:-50905889	Msa0075480:intron
TCAAACGAAGTTAAGGAATT+AGG	0.176490	1_2:-50905259	Msa0075480:CDS
TGGAGCAGTGGCAACATTTA+TGG	0.183909	1_2:-50905564	Msa0075480:CDS
AGTCTTTACAAACATGTTAT+AGG	0.218853	1_2:-50903807	Msa0075480:three_prime_UTR
TCCCACTACTTTAACAAATA+TGG	0.221392	1_2:-50903987	Msa0075480:CDS
ACATTCCCTGGTCTTGATTC+TGG	0.234355	1_2:+50906008	None:intergenic
TTTGAGGCAACAAAGAATTA+AGG	0.259486	1_2:-50903939	Msa0075480:exon
CTGTATCTAGTTGGATATTC+AGG	0.262999	1_2:+50905541	None:intergenic
TGCTCATTGTTTCCTTCATT+TGG	0.280240	1_2:+50905743	None:intergenic
TACATCATCTTGCATTAAAA+TGG	0.280338	1_2:+50905072	None:intergenic
CTCTGGGACATATTGAATAT+TGG	0.282321	1_2:+50906046	None:intergenic
GAAGGGCTTGGTTTGAAGTA+TGG	0.283281	1_2:-50905211	Msa0075480:CDS
TATAAATGAAAATAACAAAT+TGG	0.290338	1_2:+50903859	None:intergenic
CCCAATGCCAAACTTGGTTC+AGG	0.327111	1_2:+50905127	None:intergenic
TAGGCATCCATGTTATCCTT+TGG	0.334501	1_2:-50905584	Msa0075480:CDS
ATCAAAGCTGCTGAGGAGTT+TGG	0.334819	1_2:-50905900	Msa0075480:CDS
CTGAAATCCTTGTATTTGTA+AGG	0.340393	1_2:+50904011	None:intergenic
CAAGGCTCATGAATTTGATT+GGG	0.356937	1_2:-50905234	Msa0075480:CDS
GTAGCCTACATTTATGATAA+AGG	0.365779	1_2:+50904991	None:intergenic
TCAAGGCTCATGAATTTGAT+TGG	0.370106	1_2:-50905235	Msa0075480:CDS
ACGATGCCCTGAACCAAGTT+TGG	0.372935	1_2:-50905134	Msa0075480:CDS
CTCATTCCCAATGCCAAACT+TGG	0.375463	1_2:+50905121	None:intergenic
TTGAAACAGGTTATTAATCA+TGG	0.383573	1_2:-50905778	Msa0075480:intron
TATTAATCATGGGATTTCAA+TGG	0.396172	1_2:-50905767	Msa0075480:CDS
GGTGGAAATATATAGTTCTC+TGG	0.398537	1_2:+50906029	None:intergenic
ATTAAAATGGTGATGAGGTT+TGG	0.413356	1_2:+50905085	None:intergenic
CCCTGAACCAAGTTTGGCAT+TGG	0.420955	1_2:-50905128	Msa0075480:CDS
TTTATTTACCTGTATCTAGT+TGG	0.422552	1_2:+50905532	None:intergenic
CAACTGAAAAGGTTCATCTA+TGG	0.423903	1_2:-50905618	Msa0075480:CDS
GCAAGTCAAGGTCGCACAAC+TGG	0.430750	1_2:-50904119	Msa0075480:CDS
TTAATGCAAGATGATGTATC+TGG	0.436398	1_2:-50905067	Msa0075480:CDS
ATCTATGGCGAGACAGTCTT+AGG	0.443264	1_2:-50905603	Msa0075480:CDS
AAATGATTAGTTGATTTGTC+AGG	0.443772	1_2:-50903756	None:intergenic
CTGAATATCCAACTAGATAC+AGG	0.450209	1_2:-50905540	Msa0075480:intron
GGATTTCTCAAACGAAGTTA+AGG	0.453289	1_2:-50905266	Msa0075480:CDS
CTGGGATGCTATTACTGAAT+GGG	0.458561	1_2:+50905979	None:intergenic
TTTCAACTATGCAACTGAAA+AGG	0.468616	1_2:-50905629	Msa0075480:CDS
TGATCTAAGTGAAGCATGTA+AGG	0.468628	1_2:-50905952	Msa0075480:CDS
TTGTAAGGTTTGCACATTGG+TGG	0.470197	1_2:+50904026	None:intergenic
TGTAGTGCTTAAATCATTTG+AGG	0.472728	1_2:-50903955	Msa0075480:CDS
CCTGAACCAAGTTTGGCATT+GGG	0.475824	1_2:-50905127	Msa0075480:CDS
TTTAAAATATTAAGATCAAA+AGG	0.478775	1_2:-50906192	Msa0075480:five_prime_UTR
AACATCTTGCATGGCTTGGA+AGG	0.479041	1_2:+50905661	None:intergenic
TGAAACAGGTTATTAATCAT+GGG	0.491425	1_2:-50905777	Msa0075480:intron
CCAATGCCAAACTTGGTTCA+GGG	0.492968	1_2:+50905128	None:intergenic
TGGAACATGGATTGCTCTTG+AGG	0.496534	1_2:-50905026	Msa0075480:CDS
AGTAAACATCTTGCATGGCT+TGG	0.496588	1_2:+50905657	None:intergenic
CTCATGAATTTGATTGGGGA+AGG	0.498627	1_2:-50905229	Msa0075480:CDS
AATTTGATTGGGGAAGGGCT+TGG	0.498769	1_2:-50905223	Msa0075480:CDS
CACCATATTTGTTAAAGTAG+TGG	0.501105	1_2:+50903985	None:intergenic
TATGCCTTTATCATAAATGT+AGG	0.504151	1_2:-50904995	Msa0075480:CDS
ACCATATTTGTTAAAGTAGT+GGG	0.504566	1_2:+50903986	None:intergenic
AATTTCATTGTGTGAAGCAA+TGG	0.508243	1_2:-50906093	Msa0075480:exon
ACTGGGATGCTATTACTGAA+TGG	0.509509	1_2:+50905978	None:intergenic
GGTCTTCAAGTATTGAAAGA+TGG	0.520194	1_2:-50905046	Msa0075480:CDS
CATGTTATCCTTTGGAGCAG+TGG	0.527284	1_2:-50905576	Msa0075480:CDS
AAGTTAAGGAATTAGGTTCA+AGG	0.527517	1_2:-50905252	Msa0075480:CDS
ACATTTATGATAAAGGCATA+AGG	0.533864	1_2:+50904998	None:intergenic
GTGGAAATATATAGTTCTCT+GGG	0.537434	1_2:+50906030	None:intergenic
GATTTCAATGGACCAAATGA+AGG	0.541597	1_2:-50905755	Msa0075480:CDS
AAATGTAGGCTACCAGCTGC+AGG	0.541823	1_2:-50904981	Msa0075480:intron
GAAAGATTGTGCTGGCTCTA+CGG	0.543787	1_2:+50904064	None:intergenic
TTCCCTGGTCTTGATTCTGG+TGG	0.544568	1_2:+50906011	None:intergenic
AAATGTTGCCACTGCTCCAA+AGG	0.548787	1_2:+50905568	None:intergenic
CACTGCTCCAAAGGATAACA+TGG	0.553237	1_2:+50905577	None:intergenic
TTAATAAGCGTACCTGCAGC+TGG	0.554374	1_2:+50904969	None:intergenic
GCTTCACTTAGATCAATCAC+TGG	0.558675	1_2:+50905960	None:intergenic
TCATGAATTTGATTGGGGAA+GGG	0.561604	1_2:-50905228	Msa0075480:CDS
GCATACCCATGTGGTTCGCA+TGG	0.562957	1_2:+50906215	None:intergenic
TATTTGTAAGGTTTGCACAT+TGG	0.565708	1_2:+50904023	None:intergenic
TGCAATTATCTGAAGGAGCT+AGG	0.567527	1_2:+50904087	None:intergenic
TTTCCACCAGAATCAAGACC+AGG	0.567736	1_2:-50906014	Msa0075480:CDS
ATAGTACTTTAAATACATAG+AGG	0.568371	1_2:+50903834	None:intergenic
AGAAACTTATTACAAATCGT+TGG	0.568698	1_2:-50906070	Msa0075480:CDS
CTTGCATTAAAATGGTGATG+AGG	0.571455	1_2:+50905080	None:intergenic
AAGTATTGAAAGATGGAACA+TGG	0.586993	1_2:-50905039	Msa0075480:CDS
AAATTATGTTAACACTTGCA+AGG	0.589831	1_2:+50903912	None:intergenic
CTGCTAGTAAACATCTTGCA+TGG	0.595833	1_2:+50905652	None:intergenic
GTGCAAACCTTACAAATACA+AGG	0.599046	1_2:-50904018	Msa0075480:CDS
GAAAATTATCAAAGCTGCTG+AGG	0.602177	1_2:-50905907	Msa0075480:CDS
TGCCTACAGATAATCAGTAA+TGG	0.604490	1_2:-50904179	Msa0075480:intron
AAGGCTCATGAATTTGATTG+GGG	0.614434	1_2:-50905233	Msa0075480:CDS
TCTACGGTGCAATTATCTGA+AGG	0.616001	1_2:+50904080	None:intergenic
TCATCGATGAAAGATTGTGC+TGG	0.617469	1_2:+50904056	None:intergenic
CTTCACTTAGATCAATCACT+GGG	0.619527	1_2:+50905961	None:intergenic
ACATCTTGCATGGCTTGGAA+GGG	0.624864	1_2:+50905662	None:intergenic
AAATGATTTAAGCACTACAT+CGG	0.640331	1_2:+50903959	None:intergenic
GATCTAAGTGAAGCATGTAA+GGG	0.647799	1_2:-50905951	Msa0075480:CDS
GTTGTGACTAATGCAAGTCA+AGG	0.651839	1_2:-50904131	Msa0075480:CDS
ACTATGCCATGCGAACCACA+TGG	0.654101	1_2:-50906221	Msa0075480:five_prime_UTR
TTCCACCAGAATCAAGACCA+GGG	0.677870	1_2:-50906013	Msa0075480:CDS
CTATGCCATGCGAACCACAT+GGG	0.683935	1_2:-50906220	Msa0075480:five_prime_UTR
AAACTTGGTTCAGGGCATCG+TGG	0.693357	1_2:+50905136	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTAAAATATTAAGATCAAA+AGG	-	chr1_2:50903802-50903821	Msa0075480:three_prime_UTR	10.0%
!!	ATTAAAAACAAGAAAATAAA+TGG	+	chr1_2:50904146-50904165	None:intergenic	10.0%
!!!	TATAAAATTCTAATTTGTTT+TGG	+	chr1_2:50905317-50905336	None:intergenic	10.0%
!!	TATAAATGAAAATAACAAAT+TGG	+	chr1_2:50906138-50906157	None:intergenic	10.0%
!!	AGTCCTAATTAATTATTTAA+CGG	-	chr1_2:50904191-50904210	Msa0075480:intron	15.0%
!!!	TCAAATTTTAAAGTTAAAGT+TGG	-	chr1_2:50904547-50904566	Msa0075480:intron	15.0%
!!	TATGAAAAAAGTTTATAAAC+GGG	+	chr1_2:50904577-50904596	None:intergenic	15.0%
!!	GTATGAAAAAAGTTTATAAA+CGG	+	chr1_2:50904578-50904597	None:intergenic	15.0%
!!!	ACTAAAAACAATATTTTACA+AGG	+	chr1_2:50904652-50904671	None:intergenic	15.0%
!!!	TATATTTGATCATTTTGAAA+AGG	+	chr1_2:50905393-50905412	None:intergenic	15.0%
!!	AAAATTGGAAATTATAGTAA+GGG	+	chr1_2:50905452-50905471	None:intergenic	15.0%
!!	TAAAATTGGAAATTATAGTA+AGG	+	chr1_2:50905453-50905472	None:intergenic	15.0%
!!!	TTTTCACATAATATAAAAGA+TGG	+	chr1_2:50905495-50905514	None:intergenic	15.0%
!!!	ATCAACTTTCTTTTATAAAT+AGG	-	chr1_2:50905640-50905659	Msa0075480:CDS	15.0%
!!	GTCCTAATTAATTATTTAAC+GGG	-	chr1_2:50904192-50904211	Msa0075480:intron	20.0%
!!	ATCCCGTTAAATAATTAATT+AGG	+	chr1_2:50904197-50904216	None:intergenic	20.0%
!!	ATGAAAAAAGTTTATAAACG+GGG	+	chr1_2:50904576-50904595	None:intergenic	20.0%
!!	CAAAAATTGGTATATTTAGA+AGG	+	chr1_2:50904621-50904640	None:intergenic	20.0%
!!	GTCTAACAAAAAATTTAGAA+GGG	+	chr1_2:50905171-50905190	None:intergenic	20.0%
!!	AGTCTAACAAAAAATTTAGA+AGG	+	chr1_2:50905172-50905191	None:intergenic	20.0%
!!!	AAAATTCTAATTTGTTTTGG+AGG	+	chr1_2:50905314-50905333	None:intergenic	20.0%
!!!	TTCCAATTTTATTTTTTGAG+AGG	-	chr1_2:50905462-50905481	Msa0075480:intron	20.0%
!!	ATCCTCTCAAAAAATAAAAT+TGG	+	chr1_2:50905467-50905486	None:intergenic	20.0%
!!!	CTTATGACAGTTTTTTTTAA+GGG	+	chr1_2:50905700-50905719	None:intergenic	20.0%
!!!	ACTTATGACAGTTTTTTTTA+AGG	+	chr1_2:50905701-50905720	None:intergenic	20.0%
!!	AGTAATTGGAATCAATAATA+AGG	+	chr1_2:50905744-50905763	None:intergenic	20.0%
!!	ATAGTACTTTAAATACATAG+AGG	+	chr1_2:50906163-50906182	None:intergenic	20.0%
!!	TTCACACAATGAAATTTTGA+AGG	+	chr1_2:50903897-50903916	None:intergenic	25.0%
!	AGAAACTTATTACAAATCGT+TGG	-	chr1_2:50903924-50903943	Msa0075480:exon	25.0%
!	TTGAAACAGGTTATTAATCA+TGG	-	chr1_2:50904216-50904235	Msa0075480:intron	25.0%
!	TGAAACAGGTTATTAATCAT+GGG	-	chr1_2:50904217-50904236	Msa0075480:intron	25.0%
!	TATTAATCATGGGATTTCAA+TGG	-	chr1_2:50904227-50904246	Msa0075480:intron	25.0%
!	TTTATTTACCTGTATCTAGT+TGG	+	chr1_2:50904465-50904484	None:intergenic	25.0%
!	CAAGGACTAAAAACAAAAAT+TGG	+	chr1_2:50904634-50904653	None:intergenic	25.0%
!!!	TATTTTGACAATGATCTTAC+AGG	-	chr1_2:50904807-50904826	Msa0075480:intron	25.0%
!	TACATCATCTTGCATTAAAA+TGG	+	chr1_2:50904925-50904944	None:intergenic	25.0%
!!	ACATTTATGATAAAGGCATA+AGG	+	chr1_2:50904999-50905018	None:intergenic	25.0%
!	TATGCCTTTATCATAAATGT+AGG	-	chr1_2:50904999-50905018	Msa0075480:CDS	25.0%
!	TTAAAAAGAGTCGTTGATAT+TGG	-	chr1_2:50905119-50905138	Msa0075480:CDS	25.0%
!	GTTAGGACTAAAAATAATGA+TGG	+	chr1_2:50905214-50905233	None:intergenic	25.0%
!	TATTAATTAGATACGTCCTT+CGG	-	chr1_2:50905561-50905580	Msa0075480:CDS	25.0%
!	ACTCAACTTTATCTTAGAAT+AGG	+	chr1_2:50905588-50905607	None:intergenic	25.0%
!!	AGTTCAGATACATAAACTTT+TGG	+	chr1_2:50905613-50905632	None:intergenic	25.0%
!!	ACTGTCATAAGTTTCTATTT+TGG	-	chr1_2:50905709-50905728	Msa0075480:CDS	25.0%
!!!	TGTTAAATTGTATTGACTTG+TGG	-	chr1_2:50905789-50905808	Msa0075480:intron	25.0%
!!	ACCATATTTGTTAAAGTAGT+GGG	+	chr1_2:50906011-50906030	None:intergenic	25.0%
!	AAATGATTTAAGCACTACAT+CGG	+	chr1_2:50906038-50906057	None:intergenic	25.0%
!	AAATTATGTTAACACTTGCA+AGG	+	chr1_2:50906085-50906104	None:intergenic	25.0%
!	AGTCTTTACAAACATGTTAT+AGG	-	chr1_2:50906187-50906206	Msa0075480:five_prime_UTR	25.0%
!!!	TATTTTAAAGCATACCCATG+TGG	+	chr1_2:50903791-50903810	None:intergenic	30.0%
!	GAATGAAAGGTTTTTGTTGA+TGG	+	chr1_2:50903870-50903889	None:intergenic	30.0%
!!	TTTTGAAGGTGAAGAATGAA+AGG	+	chr1_2:50903883-50903902	None:intergenic	30.0%
	AATTTCATTGTGTGAAGCAA+TGG	-	chr1_2:50903901-50903920	Msa0075480:three_prime_UTR	30.0%
	GTGGAAATATATAGTTCTCT+GGG	+	chr1_2:50903967-50903986	None:intergenic	30.0%
	TTATTTAACGGGATTGAAAC+AGG	-	chr1_2:50904203-50904222	Msa0075480:intron	30.0%
!	GGAAACAATGAGCATTTTTA+AGG	-	chr1_2:50904260-50904279	Msa0075480:intron	30.0%
!!!	AAGTTTTTTCTGTACTCATC+AGG	+	chr1_2:50904300-50904319	None:intergenic	30.0%
	TTTCAACTATGCAACTGAAA+AGG	-	chr1_2:50904365-50904384	Msa0075480:intron	30.0%
!	GGCAGAAAAGTACATATATA+AGG	+	chr1_2:50904600-50904619	None:intergenic	30.0%
	TCAAACGAAGTTAAGGAATT+AGG	-	chr1_2:50904735-50904754	Msa0075480:intron	30.0%
	AAGTTAAGGAATTAGGTTCA+AGG	-	chr1_2:50904742-50904761	Msa0075480:intron	30.0%
!	ATTAAAATGGTGATGAGGTT+TGG	+	chr1_2:50904912-50904931	None:intergenic	30.0%
	TTAATGCAAGATGATGTATC+TGG	-	chr1_2:50904927-50904946	Msa0075480:intron	30.0%
!!	AAGTATTGAAAGATGGAACA+TGG	-	chr1_2:50904955-50904974	Msa0075480:intron	30.0%
	GTAGCCTACATTTATGATAA+AGG	+	chr1_2:50905006-50905025	None:intergenic	30.0%
!	CATGAGTTGACTAAAAAGTT+AGG	+	chr1_2:50905231-50905250	None:intergenic	30.0%
	CTAAATTTGTCCCTAAATGT+AGG	-	chr1_2:50905426-50905445	Msa0075480:intron	30.0%
!!	TTGAGAAAGTATTATTGACC+TGG	+	chr1_2:50905539-50905558	None:intergenic	30.0%
!	TCTTTTATAAATAGGACCAG+AGG	-	chr1_2:50905648-50905667	Msa0075480:CDS	30.0%
!	CTTTTATAAATAGGACCAGA+GGG	-	chr1_2:50905649-50905668	Msa0075480:CDS	30.0%
!!	GTCATAAGTTTCTATTTTGG+TGG	-	chr1_2:50905712-50905731	Msa0075480:CDS	30.0%
	TAGAGCAATTCAGAAGTAAT+TGG	+	chr1_2:50905758-50905777	None:intergenic	30.0%
!	TACCATTACTGATTATCTGT+AGG	+	chr1_2:50905820-50905839	None:intergenic	30.0%
	TATTTGTAAGGTTTGCACAT+TGG	+	chr1_2:50905974-50905993	None:intergenic	30.0%
	CTGAAATCCTTGTATTTGTA+AGG	+	chr1_2:50905986-50906005	None:intergenic	30.0%
	TCCCACTACTTTAACAAATA+TGG	-	chr1_2:50906007-50906026	Msa0075480:CDS	30.0%
!	CACCATATTTGTTAAAGTAG+TGG	+	chr1_2:50906012-50906031	None:intergenic	30.0%
	TGTAGTGCTTAAATCATTTG+AGG	-	chr1_2:50906039-50906058	Msa0075480:CDS	30.0%
!	TTTGAGGCAACAAAGAATTA+AGG	-	chr1_2:50906055-50906074	Msa0075480:CDS	30.0%
!!	CTCTGGGACATATTGAATAT+TGG	+	chr1_2:50903951-50903970	None:intergenic	35.0%
	GGTGGAAATATATAGTTCTC+TGG	+	chr1_2:50903968-50903987	None:intergenic	35.0%
	CTTCACTTAGATCAATCACT+GGG	+	chr1_2:50904036-50904055	None:intergenic	35.0%
	TGATCTAAGTGAAGCATGTA+AGG	-	chr1_2:50904042-50904061	Msa0075480:CDS	35.0%
	GATCTAAGTGAAGCATGTAA+GGG	-	chr1_2:50904043-50904062	Msa0075480:CDS	35.0%
	GAAAATTATCAAAGCTGCTG+AGG	-	chr1_2:50904087-50904106	Msa0075480:CDS	35.0%
	GATTTCAATGGACCAAATGA+AGG	-	chr1_2:50904239-50904258	Msa0075480:intron	35.0%
	TGCTCATTGTTTCCTTCATT+TGG	+	chr1_2:50904254-50904273	None:intergenic	35.0%
	CAACTGAAAAGGTTCATCTA+TGG	-	chr1_2:50904376-50904395	Msa0075480:intron	35.0%
	CTGTATCTAGTTGGATATTC+AGG	+	chr1_2:50904456-50904475	None:intergenic	35.0%
	CTGAATATCCAACTAGATAC+AGG	-	chr1_2:50904454-50904473	Msa0075480:intron	35.0%
	ATCAAACTACTACATGTGCA+AGG	+	chr1_2:50904675-50904694	None:intergenic	35.0%
	TACACGCTCTCTGTTAAAAA+AGG	+	chr1_2:50904706-50904725	None:intergenic	35.0%
!!!	TTTTTTAACAGAGAGCGTGT+AGG	-	chr1_2:50904705-50904724	Msa0075480:intron	35.0%
!!	TTTTTAACAGAGAGCGTGTA+GGG	-	chr1_2:50904706-50904725	Msa0075480:intron	35.0%
	GGATTTCTCAAACGAAGTTA+AGG	-	chr1_2:50904728-50904747	Msa0075480:intron	35.0%
	TCAAGGCTCATGAATTTGAT+TGG	-	chr1_2:50904759-50904778	Msa0075480:intron	35.0%
	CAAGGCTCATGAATTTGATT+GGG	-	chr1_2:50904760-50904779	Msa0075480:intron	35.0%
	AAGGCTCATGAATTTGATTG+GGG	-	chr1_2:50904761-50904780	Msa0075480:intron	35.0%
	TCATGAATTTGATTGGGGAA+GGG	-	chr1_2:50904766-50904785	Msa0075480:intron	35.0%
!	CTTGCATTAAAATGGTGATG+AGG	+	chr1_2:50904917-50904936	None:intergenic	35.0%
!!	GGTCTTCAAGTATTGAAAGA+TGG	-	chr1_2:50904948-50904967	Msa0075480:intron	35.0%
	AAAAGAGTCGTTGATATTGG+AGG	-	chr1_2:50905122-50905141	Msa0075480:CDS	35.0%
	AAAGAGTCGTTGATATTGGA+GGG	-	chr1_2:50905123-50905142	Msa0075480:CDS	35.0%
	ATAGTAAGGGCCTACATTTA+GGG	+	chr1_2:50905439-50905458	None:intergenic	35.0%
	TATAGTAAGGGCCTACATTT+AGG	+	chr1_2:50905440-50905459	None:intergenic	35.0%
	TTATCTTAGAATAGGACCGA+AGG	+	chr1_2:50905580-50905599	None:intergenic	35.0%
	AAAGTTTAGTACTATCCCTC+TGG	+	chr1_2:50905667-50905686	None:intergenic	35.0%
	TGCCTACAGATAATCAGTAA+TGG	-	chr1_2:50905815-50905834	Msa0075480:intron	35.0%
	GTGCAAACCTTACAAATACA+AGG	-	chr1_2:50905976-50905995	Msa0075480:CDS	35.0%
!	TGGCATAGTTTTCTTGTGTC+TGG	+	chr1_2:50903762-50903781	None:intergenic	40.0%
!	AATGGGATTTTCACATTCCC+TGG	+	chr1_2:50904001-50904020	None:intergenic	40.0%
	CTGGGATGCTATTACTGAAT+GGG	+	chr1_2:50904018-50904037	None:intergenic	40.0%
	ACTGGGATGCTATTACTGAA+TGG	+	chr1_2:50904019-50904038	None:intergenic	40.0%
	GCTTCACTTAGATCAATCAC+TGG	+	chr1_2:50904037-50904056	None:intergenic	40.0%
	TGAGGAGTTTGGATTCTTTC+AGG	-	chr1_2:50904105-50904124	Msa0075480:CDS	40.0%
	AGTAAACATCTTGCATGGCT+TGG	+	chr1_2:50904340-50904359	None:intergenic	40.0%
	CTGCTAGTAAACATCTTGCA+TGG	+	chr1_2:50904345-50904364	None:intergenic	40.0%
	TAGGCATCCATGTTATCCTT+TGG	-	chr1_2:50904410-50904429	Msa0075480:intron	40.0%
!!	TTTTAACAGAGAGCGTGTAG+GGG	-	chr1_2:50904707-50904726	Msa0075480:intron	40.0%
	CTCATGAATTTGATTGGGGA+AGG	-	chr1_2:50904765-50904784	Msa0075480:intron	40.0%
	GTTGTGACTAATGCAAGTCA+AGG	-	chr1_2:50905863-50905882	Msa0075480:intron	40.0%
	TGCAATTATCTGAAGGAGCT+AGG	+	chr1_2:50905910-50905929	None:intergenic	40.0%
	TCTACGGTGCAATTATCTGA+AGG	+	chr1_2:50905917-50905936	None:intergenic	40.0%
	TCATCGATGAAAGATTGTGC+TGG	+	chr1_2:50905941-50905960	None:intergenic	40.0%
	TTGTAAGGTTTGCACATTGG+TGG	+	chr1_2:50905971-50905990	None:intergenic	40.0%
	TTTCCACCAGAATCAAGACC+AGG	-	chr1_2:50903980-50903999	Msa0075480:CDS	45.0%
	TTCCACCAGAATCAAGACCA+GGG	-	chr1_2:50903981-50904000	Msa0075480:CDS	45.0%
!!	ACATTCCCTGGTCTTGATTC+TGG	+	chr1_2:50903989-50904008	None:intergenic	45.0%
	ATCAAAGCTGCTGAGGAGTT+TGG	-	chr1_2:50904094-50904113	Msa0075480:CDS	45.0%
!	ACATCTTGCATGGCTTGGAA+GGG	+	chr1_2:50904335-50904354	None:intergenic	45.0%
!	AACATCTTGCATGGCTTGGA+AGG	+	chr1_2:50904336-50904355	None:intergenic	45.0%
	ATCTATGGCGAGACAGTCTT+AGG	-	chr1_2:50904391-50904410	Msa0075480:intron	45.0%
	CACTGCTCCAAAGGATAACA+TGG	+	chr1_2:50904420-50904439	None:intergenic	45.0%
!!	CATGTTATCCTTTGGAGCAG+TGG	-	chr1_2:50904418-50904437	Msa0075480:intron	45.0%
	AAATGTTGCCACTGCTCCAA+AGG	+	chr1_2:50904429-50904448	None:intergenic	45.0%
	TGGAGCAGTGGCAACATTTA+TGG	-	chr1_2:50904430-50904449	Msa0075480:intron	45.0%
	AATTTGATTGGGGAAGGGCT+TGG	-	chr1_2:50904771-50904790	Msa0075480:intron	45.0%
!	GAAGGGCTTGGTTTGAAGTA+TGG	-	chr1_2:50904783-50904802	Msa0075480:intron	45.0%
	CCAATGCCAAACTTGGTTCA+GGG	+	chr1_2:50904869-50904888	None:intergenic	45.0%
	CCTGAACCAAGTTTGGCATT+GGG	-	chr1_2:50904867-50904886	Msa0075480:intron	45.0%
	CTCATTCCCAATGCCAAACT+TGG	+	chr1_2:50904876-50904895	None:intergenic	45.0%
!	TGGAACATGGATTGCTCTTG+AGG	-	chr1_2:50904968-50904987	Msa0075480:intron	45.0%
	TTAATAAGCGTACCTGCAGC+TGG	+	chr1_2:50905028-50905047	None:intergenic	45.0%
!	GTGGTCACAACTTTTCGCTT+CGG	-	chr1_2:50905145-50905164	Msa0075480:CDS	45.0%
!!	AACTTGCTAGAGAGTTTGCC+AGG	-	chr1_2:50905518-50905537	Msa0075480:intron	45.0%
!!	GAAAGATTGTGCTGGCTCTA+CGG	+	chr1_2:50905933-50905952	None:intergenic	45.0%
!!	TCATTATATATAAATATAAA+TGG	-	chr1_2:50905048-50905067	Msa0075480:CDS	5.0%
	ACTATGCCATGCGAACCACA+TGG	-	chr1_2:50903773-50903792	Msa0075480:three_prime_UTR	50.0%
	CTATGCCATGCGAACCACAT+GGG	-	chr1_2:50903774-50903793	Msa0075480:three_prime_UTR	50.0%
!!	TTCCCTGGTCTTGATTCTGG+TGG	+	chr1_2:50903986-50904005	None:intergenic	50.0%
!!	AAACTTGGTTCAGGGCATCG+TGG	+	chr1_2:50904861-50904880	None:intergenic	50.0%
	ACGATGCCCTGAACCAAGTT+TGG	-	chr1_2:50904860-50904879	Msa0075480:intron	50.0%
	CCCTGAACCAAGTTTGGCAT+TGG	-	chr1_2:50904866-50904885	Msa0075480:intron	50.0%
	CCCAATGCCAAACTTGGTTC+AGG	+	chr1_2:50904870-50904889	None:intergenic	50.0%
	AAATGTAGGCTACCAGCTGC+AGG	-	chr1_2:50905013-50905032	Msa0075480:CDS	50.0%
	GAGTCGTTGATATTGGAGGG+TGG	-	chr1_2:50905126-50905145	Msa0075480:CDS	50.0%
	GCATACCCATGTGGTTCGCA+TGG	+	chr1_2:50903782-50903801	None:intergenic	55.0%
	GCAAGTCAAGGTCGCACAAC+TGG	-	chr1_2:50905875-50905894	Msa0075480:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	50903758	50906258	50903758	ID=Msa0075480;Name=Msa0075480
chr1_2	mRNA	50903758	50906258	50903758	ID=Msa0075480-mRNA-1;Parent=Msa0075480;Name=Msa0075480-mRNA-1;_AED=0.06;_eAED=0.06;_QI=162\|1\|1\|1\|1\|1\|4\|183\|342
chr1_2	exon	50903758	50904192	50903758	ID=Msa0075480-mRNA-1:exon:15674;Parent=Msa0075480-mRNA-1
chr1_2	exon	50904982	50905300	50904982	ID=Msa0075480-mRNA-1:exon:15673;Parent=Msa0075480-mRNA-1
chr1_2	exon	50905541	50905791	50905541	ID=Msa0075480-mRNA-1:exon:15672;Parent=Msa0075480-mRNA-1
chr1_2	exon	50905890	50906258	50905890	ID=Msa0075480-mRNA-1:exon:15671;Parent=Msa0075480-mRNA-1
chr1_2	five_prime_UTR	50906097	50906258	50906097	ID=Msa0075480-mRNA-1:five_prime_utr;Parent=Msa0075480-mRNA-1
chr1_2	CDS	50905890	50906096	50905890	ID=Msa0075480-mRNA-1:cds;Parent=Msa0075480-mRNA-1
chr1_2	CDS	50905541	50905791	50905541	ID=Msa0075480-mRNA-1:cds;Parent=Msa0075480-mRNA-1
chr1_2	CDS	50904982	50905300	50904982	ID=Msa0075480-mRNA-1:cds;Parent=Msa0075480-mRNA-1
chr1_2	CDS	50903941	50904192	50903941	ID=Msa0075480-mRNA-1:cds;Parent=Msa0075480-mRNA-1
chr1_2	three_prime_UTR	50903758	50903940	50903758	ID=Msa0075480-mRNA-1:three_prime_utr;Parent=Msa0075480-mRNA-1

Gene Sequence

>Msa0075480

ATGGAGAAACTTATTACAAATCGTTGGTCCAATATTCAATATGTCCCAGAGAACTATATATTTCCACCAGAATCAAGACCAGGGAATGTGAAAATCCCATTCAGTAATAGCATCCCAGTGATTGATCTAAGTGAAGCATGTAAGGGTGATAGAAGCAATATAATCAAGAAAATTATCAAAGCTGCTGAGGAGTTTGGATTCTTTCAGGTTATTAATCATGGGATTTCAATGGACCAAATGAAGGAAACAATGAGCATTTTTAAGGAGATTTTTCAGATGCCTGATGAGTACAGAAAAAACTTGTGTACTAATGACCCTTCCAAGCCATGCAAGATGTTTACTAGCAGTTTCAACTATGCAACTGAAAAGGTTCATCTATGGCGAGACAGTCTTAGGCATCCATGTTATCCTTTGGAGCAGTGGCAACATTTATGGCCTGAATATCCAACTAGATACAGAGAGCGTGTAGGGGATTTCTCAAACGAAGTTAAGGAATTAGGTTCAAGGCTCATGAATTTGATTGGGGAAGGGCTTGGTTTGAAGTATGGATATTTTGACAATGATCTTACAGGATCAATGATTCTGTCAGTTAATCATTATCCACGATGCCCTGAACCAAGTTTGGCATTGGGAATGAGTAAACACTCAGATCCAAACCTCATCACCATTTTAATGCAAGATGATGTATCTGGTCTTCAAGTATTGAAAGATGGAACATGGATTGCTCTTGAGGCTCGTCCTTATGCCTTTATCATAAATGTAGGCTACCAGCTGCAGATAATCAGTAATGGTAAACTAAAAAGTGTAGAGCATAGAGTTGTGACTAATGCAAGTCAAGGTCGCACAACTGGTGCATTTTGCCTAGCTCCTTCAGATAATTGCACCGTAGAGCCAGCACAATCTTTCATCGATGAACACAATCCACCAATGTGCAAACCTTACAAATACAAGGATTTCAGTTCCCACTACTTTAACAAATATGGTGACACCGATGTAGTGCTTAAATCATTTGAGGCAACAAAGAATTAA

Protein sequence

>Msa0075480

MEKLITNRWSNIQYVPENYIFPPESRPGNVKIPFSNSIPVIDLSEACKGDRSNIIKKIIKAAEEFGFFQVINHGISMDQMKETMSIFKEIFQMPDEYRKNLCTNDPSKPCKMFTSSFNYATEKVHLWRDSLRHPCYPLEQWQHLWPEYPTRYRERVGDFSNEVKELGSRLMNLIGEGLGLKYGYFDNDLTGSMILSVNHYPRCPEPSLALGMSKHSDPNLITILMQDDVSGLQVLKDGTWIALEARPYAFIINVGYQLQIISNGKLKSVEHRVVTNASQGRTTGAFCLAPSDNCTVEPAQSFIDEHNPPMCKPYKYKDFSSHYFNKYGDTDVVLKSFEATKN*