AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0030020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0030020 MtrunA17_Chr1g0187051 82.411 506 26 4 447 889 4 509 0.0 824
Msa0030020 MtrunA17_Chr1g0187051 57.426 505 127 8 22 455 5 492 0.0 536
Msa0030020 MtrunA17_Chr1g0187071 81.980 505 28 5 1 447 1 500 0.0 795
Msa0030020 MtrunA17_Chr1g0187071 65.526 380 109 6 441 805 6 378 2.07e-150 453
Msa0030020 MtrunA17_Chr1g0187071 52.336 107 42 2 781 884 418 518 2.86e-20 95.5
Msa0030020 MtrunA17_Chr1g0187021 78.400 375 63 4 449 805 5 379 0.0 578
Msa0030020 MtrunA17_Chr1g0187021 59.200 500 125 8 31 455 12 507 0.0 557
Msa0030020 MtrunA17_Chr1g0187021 78.750 80 17 0 805 884 440 519 1.01e-31 130
Msa0030020 MtrunA17_Chr1g0184551 49.795 488 168 9 27 445 16 495 2.92e-151 455
Msa0030020 MtrunA17_Chr1g0184551 60.665 361 124 6 458 805 15 370 3.75e-143 434
Msa0030020 MtrunA17_Chr1g0184551 46.429 112 56 2 780 888 409 519 5.25e-22 100
Msa0030020 MtrunA17_Chr7g0260781 53.719 363 106 7 147 458 14 365 2.49e-104 328
Msa0030020 MtrunA17_Chr7g0260781 66.355 214 58 4 605 805 22 234 5.68e-77 255
Msa0030020 MtrunA17_Chr7g0260781 59.211 76 31 0 805 880 295 370 6.49e-22 99.0
Msa0030020 MtrunA17_Chr7g0260791 54.478 134 57 2 473 605 43 173 2.66e-42 153
Msa0030020 MtrunA17_Chr7g0260791 48.000 125 52 2 44 155 49 173 1.82e-30 119
Msa0030020 MtrunA17_Chr1g0187031 65.385 52 18 0 459 510 4 55 1.84e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0030020 AT1G06750.2 49.698 497 173 9 27 458 25 509 2.53e-142 433
Msa0030020 AT1G06750.2 60.331 363 121 9 458 805 24 378 4.99e-132 406
Msa0030020 AT1G06750.2 55.000 80 36 0 805 884 439 518 3.34e-20 95.9
Msa0030020 AT1G06750.3 49.698 497 173 9 27 458 18 502 2.58e-142 432
Msa0030020 AT1G06750.3 60.331 363 121 9 458 805 17 371 4.80e-132 406
Msa0030020 AT1G06750.3 55.000 80 36 0 805 884 432 511 3.19e-20 95.9
Msa0030020 AT1G06750.1 49.698 497 173 9 27 458 18 502 2.58e-142 432
Msa0030020 AT1G06750.1 60.331 363 121 9 458 805 17 371 4.80e-132 406
Msa0030020 AT1G06750.1 55.000 80 36 0 805 884 432 511 3.19e-20 95.9
Msa0030020 AT2G30630.1 52.993 451 148 7 61 456 81 522 1.60e-139 426
Msa0030020 AT2G30630.1 59.669 362 125 8 458 805 31 385 3.68e-128 396
Msa0030020 AT2G30630.1 57.895 76 32 0 805 880 446 521 2.05e-21 99.8
Msa0030020 AT2G30630.2 50.847 472 147 8 61 456 81 543 1.01e-134 414
Msa0030020 AT2G30630.2 56.658 383 124 9 458 805 31 406 2.25e-123 384
Msa0030020 AT2G30630.2 57.895 76 32 0 805 880 467 542 2.29e-21 99.8
Msa0030020 AT1G04280.2 51.732 462 154 6 46 445 5 459 1.39e-133 408
Msa0030020 AT1G04280.2 62.687 335 112 4 484 805 5 339 1.86e-120 374
Msa0030020 AT1G04280.2 60.494 81 32 0 805 885 400 480 3.35e-23 104
Msa0030020 AT1G04280.1 51.732 462 154 6 46 445 59 513 6.85e-133 409
Msa0030020 AT1G04280.1 62.687 335 112 4 484 805 59 393 8.87e-120 374
Msa0030020 AT1G04280.1 60.494 81 32 0 805 885 454 534 5.23e-23 104
Msa0030020 AT2G30630.3 59.669 362 125 8 458 805 31 385 2.36e-130 397
Msa0030020 AT2G30630.3 50.613 326 103 5 61 337 81 397 1.42e-89 290

Find 198 sgRNAs with CRISPR-Local

Find 983 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATAAATTGTATATTATT+TGG 0.094496 1_1:+55910086 None:intergenic
TCAACAAGTTTGCAATATTT+TGG 0.119289 1_1:+55921879 None:intergenic
TTTCATACAAAACAGCTTAT+TGG 0.183329 1_1:-55912108 Msa0030020:intron
CGTTGAAGCTGATGCGTTTA+AGG 0.191956 1_1:-55922565 Msa0030020:CDS
AGAAGAGATTAAAGCAATAA+AGG 0.228358 1_1:-55923239 Msa0030020:CDS
TTGCTGCCGCCTCGCATTAC+CGG 0.232332 1_1:-55916048 Msa0030020:CDS
GGACAATAACTGAAAATTAT+TGG 0.237529 1_1:-55922205 Msa0030020:CDS
AATCAAAGGAAAATTATAAA+AGG 0.238536 1_1:-55922151 Msa0030020:CDS
ATGGCTTTGGCAGATCATTT+TGG 0.257784 1_1:-55913189 Msa0030020:intron
TCTTGTCACCTTCAAATTCT+TGG 0.258054 1_1:+55913654 None:intergenic
AAGGCTGAAAGAAATTATTT+TGG 0.258171 1_1:-55913886 Msa0030020:CDS
AATTTCTTTCAGCCTTGTTT+TGG 0.258966 1_1:+55913893 None:intergenic
TGGATTTCTGTAGATATTCT+TGG 0.266352 1_1:+55914179 None:intergenic
TTCATACAAAACAGCTTATT+GGG 0.272634 1_1:-55912107 Msa0030020:intron
TCCAAGCATTTGAGAACTTC+AGG 0.301231 1_1:+55921666 None:intergenic
TGTTATTCAGATGGTTCTAT+TGG 0.310144 1_1:-55916121 Msa0030020:intron
CTACTTGGGGAATGATCTTC+TGG 0.313154 1_1:+55915999 None:intergenic
TTCATTATAAAGTTCGTAGA+TGG 0.319575 1_1:+55921611 None:intergenic
GAGTCCAGTGTTGCTGCTTA+TGG 0.322600 1_1:-55923164 Msa0030020:CDS
ACAGAACCAGGTTCCATTAC+TGG 0.325236 1_1:+55911967 None:intergenic
GGCTATCTTGCTGTTGTTAG+AGG 0.330163 1_1:-55922074 Msa0030020:CDS
TATATAAAGCCCTTCACAAT+AGG 0.340229 1_1:-55913105 Msa0030020:CDS
ACATTGTTCTTTCTCCTTCA+AGG 0.341632 1_1:-55921551 Msa0030020:CDS
GTGTTGGCAGCTAGGCAAAT+AGG 0.346916 1_1:-55914244 Msa0030020:intron
CATGCTCGAAACTGCTGAAT+TGG 0.348113 1_1:-55922493 Msa0030020:intron
CTCCTCTCACTGTGGGCCAT+GGG 0.353557 1_1:+55913571 None:intergenic
TGAACCTGACTAATGATATA+TGG 0.357237 1_1:+55914028 None:intergenic
GAAGAGATTAAAGCAATAAA+GGG 0.359600 1_1:-55923238 Msa0030020:CDS
GGGCAAGTTTGCATAACTTT+GGG 0.362739 1_1:+55914200 None:intergenic
CTGTTCATGGGTGGCGGCAT+GGG 0.362808 1_1:-55913538 Msa0030020:CDS
CTATGGGACCTGGCACTGTT+TGG 0.363637 1_1:-55921578 Msa0030020:CDS
GATGCTTTGGTCGCACGCTT+TGG 0.374788 1_1:+55914159 None:intergenic
ATGGGTGGCGGCATGGGAGC+TGG 0.375664 1_1:-55913532 Msa0030020:CDS
ACTCCTCTCACTGTGGGCCA+TGG 0.376240 1_1:+55913570 None:intergenic
CCAACTAGCTCAATTCTATA+AGG 0.376453 1_1:+55912724 None:intergenic
GTACAGTTAATGAAAATTAC+TGG 0.377216 1_1:-55912786 Msa0030020:CDS
CTTTGATTCGTGCTCTTCTT+CGG 0.378530 1_1:+55922166 None:intergenic
TTCTGAACACTTGACCTTGA+AGG 0.379470 1_1:+55911922 None:intergenic
GACAATAACTGAAAATTATT+GGG 0.379749 1_1:-55922204 Msa0030020:CDS
AGTCCAGTGTTGCTGCTTAT+GGG 0.381651 1_1:-55923163 Msa0030020:CDS
ACACTGGCTGCCTCCTTAGC+TGG 0.387521 1_1:-55916082 Msa0030020:CDS
TTCCTTGTGAAGTTCATAGA+TGG 0.388326 1_1:+55911996 None:intergenic
GGATTTCTGTAGATATTCTT+GGG 0.392456 1_1:+55914180 None:intergenic
TAATGGAACCTGGTTCTGTT+TGG 0.392524 1_1:-55911963 Msa0030020:CDS
GAGTCCAGTGCTACTGTTCA+TGG 0.394163 1_1:-55913551 Msa0030020:CDS
TGGGCAAGTTTGCATAACTT+TGG 0.395166 1_1:+55914199 None:intergenic
CTGCTTATGGGTGGAGGCAT+GGG 0.397062 1_1:-55923151 Msa0030020:CDS
ATGGGTGGAGGCATGGGATC+TGG 0.410048 1_1:-55923145 Msa0030020:CDS
ATATAAAGCCCTTCACAATA+GGG 0.410542 1_1:-55913104 Msa0030020:CDS
TGAATCTCTTTATGTTAAGT+TGG 0.414804 1_1:-55914107 Msa0030020:CDS
CAAGATATGCATAGATGCTT+TGG 0.416140 1_1:+55914146 None:intergenic
TTGCTGTTGTTAGAGGCATT+AGG 0.419183 1_1:-55922067 Msa0030020:intron
CACAAATATAGGTATCGAAT+GGG 0.422050 1_1:-55922254 Msa0030020:intron
TCCACATCACTTGACCTTGA+AGG 0.425410 1_1:+55921537 None:intergenic
ACCTGAAGTTCTCAAATGCT+TGG 0.434910 1_1:-55921667 Msa0030020:CDS
AAACTGTTTGCTACCTTTGG+TGG 0.436970 1_1:+55921819 None:intergenic
GCTGCTTATGGGTGGAGGCA+TGG 0.440698 1_1:-55923152 Msa0030020:CDS
TTCATTAACTGTACCATCCT+CGG 0.441361 1_1:+55912795 None:intergenic
ATGTAAGTGGGGAATGATCT+TGG 0.443811 1_1:+55925786 None:intergenic
ACTGTTCATGGGTGGCGGCA+TGG 0.444498 1_1:-55913539 Msa0030020:CDS
CAAGTGTTCAGAAAGAGTTA+AGG 0.445444 1_1:-55911912 Msa0030020:CDS
CGGATGTGGTTTGATGTAAG+TGG 0.450426 1_1:+55925773 None:intergenic
CACAAATATAAATACAGAAT+GGG 0.450941 1_1:-55912835 Msa0030020:CDS
TATATAAAGCTCTTAACTCT+AGG 0.453317 1_1:-55922530 Msa0030020:CDS
CAAGTAGATATAAAACAATC+TGG 0.453935 1_1:-55915983 Msa0030020:CDS
TAATGAAACCAACACTGCTA+TGG 0.454761 1_1:-55921595 Msa0030020:CDS
GAGAGTAACCAAGAATTTGA+AGG 0.463515 1_1:-55913662 Msa0030020:CDS
CACTTACATCAAACCACATC+CGG 0.465896 1_1:-55925772 Msa0030020:CDS
CCAGGTTCCATTACTGGGCT+AGG 0.466586 1_1:+55911973 None:intergenic
TGCATATCTTGCCAATGAAA+AGG 0.480314 1_1:-55914134 Msa0030020:CDS
CTTCTGGTCTACTCCCACCT+TGG 0.480477 1_1:+55916015 None:intergenic
TTGGGCAACACGGCCGGATG+TGG 0.481347 1_1:+55925759 None:intergenic
AGCTCCATATATCATTAGTC+AGG 0.481850 1_1:-55914032 Msa0030020:intron
AAGTGTTCAGAAAGAGTTAA+GGG 0.487553 1_1:-55911911 Msa0030020:CDS
ATGTCATTCCAAACAGTGCC+AGG 0.488602 1_1:+55921570 None:intergenic
ATATAAAGCTCTTAACTCTA+GGG 0.489636 1_1:-55922529 Msa0030020:CDS
GACAAGAGTGTTCTCTACTT+TGG 0.492501 1_1:-55913638 Msa0030020:CDS
AGCCTCCATCGTCGAATCAA+TGG 0.497510 1_1:-55925818 Msa0030020:CDS
CACTGGACTCCTCTCACTGT+GGG 0.497718 1_1:+55913564 None:intergenic
GACTAATGATATATGAAGCT+TGG 0.499250 1_1:+55924226 None:intergenic
GCCAGGTCCCATAGCAGTGT+TGG 0.499542 1_1:+55921587 None:intergenic
TATAAATACAGAATGGGAGT+AGG 0.500049 1_1:-55912829 Msa0030020:CDS
ATCAAAGGAAAATTATAAAA+GGG 0.500396 1_1:-55922150 Msa0030020:CDS
TCACAAATATAAATACAGAA+TGG 0.501966 1_1:-55912836 Msa0030020:CDS
AGCTTCATATATCATTAGTC+AGG 0.502600 1_1:-55924223 Msa0030020:intron
CTAGTTGGTGTGGTTTGTGA+TGG 0.503630 1_1:-55922095 Msa0030020:CDS
AATGAAACCAACACTGCTAT+GGG 0.504209 1_1:-55921594 Msa0030020:CDS
CCTTATAGAATTGAGCTAGT+TGG 0.507159 1_1:-55912724 Msa0030020:CDS
GGATATAGAGAAGCTAAAGA+TGG 0.509091 1_1:-55922227 Msa0030020:CDS
CAGAACCAGGTTCCATTACT+GGG 0.509422 1_1:+55911968 None:intergenic
TCATGGACAGTACCTTATCA+TGG 0.510359 1_1:-55912900 Msa0030020:CDS
TCCTCTCACTGTGGGCCATG+GGG 0.510432 1_1:+55913572 None:intergenic
GTAATGCGAGGCGGCAGCAA+CGG 0.510618 1_1:+55916051 None:intergenic
GGTTCCAGAGTTATGCAGAT+TGG 0.511336 1_1:-55924394 Msa0030020:CDS
GCAAACTTGTTGACAGTGCA+AGG 0.512689 1_1:-55921869 Msa0030020:CDS
ATAAATACAGAATGGGAGTA+GGG 0.514374 1_1:-55912828 Msa0030020:intron
AGAGTTATGCAGATTGGCAC+AGG 0.514548 1_1:-55924388 Msa0030020:CDS
ATACAGCTACAAGGTACTAC+TGG 0.516118 1_1:-55925883 Msa0030020:CDS
CAAGGAACCTAGCCCAGTAA+TGG 0.516181 1_1:-55911980 Msa0030020:CDS
TCACAAATATAGGTATCGAA+TGG 0.521297 1_1:-55922255 Msa0030020:intron
CAGCTTATTGGGTGGAAGGA+TGG 0.524503 1_1:-55912096 Msa0030020:CDS
CCCTACAGAATTGTGCTAGT+TGG 0.524552 1_1:-55922110 Msa0030020:CDS
TTTCGAGCAGACTATTGCTA+TGG 0.525703 1_1:-55912869 Msa0030020:CDS
CAGAATTGTGCTAGTTGGTG+TGG 0.525790 1_1:-55922105 Msa0030020:CDS
CGAAGAAGAGCACGAATCAA+AGG 0.525845 1_1:-55922165 Msa0030020:CDS
ACATACTGCAGTTAATAGAA+TGG 0.530487 1_1:-55921719 Msa0030020:intron
GAGAGTAGCAAAGAATCTAA+AGG 0.532305 1_1:-55923287 Msa0030020:CDS
AGTGAGGGTGAAATCACAAC+TGG 0.534858 1_1:-55921931 Msa0030020:CDS
AGTCCAGTGCTACTGTTCAT+GGG 0.535994 1_1:-55913550 Msa0030020:CDS
GAAAACAATCAATGTCGGTA+AGG 0.537188 1_1:-55913605 Msa0030020:CDS
GGATGTGGTTTGATGTAAGT+GGG 0.540978 1_1:+55925774 None:intergenic
CCACCCATGAACAGTAGCAC+TGG 0.543778 1_1:+55913547 None:intergenic
CCACCCATAAGCAGCAACAC+TGG 0.545632 1_1:+55923160 None:intergenic
ACCAACACTGCTATGGGACC+TGG 0.548467 1_1:-55921588 Msa0030020:CDS
GTGCTACTGTTCATGGGTGG+CGG 0.549123 1_1:-55913544 Msa0030020:CDS
TGGTGATAACAATCTATTAG+TGG 0.549453 1_1:-55912076 Msa0030020:CDS
CCTAGCCCAGTAATGGAACC+TGG 0.550707 1_1:-55911973 Msa0030020:CDS
GCATCTGCCTCAACAACCAC+TGG 0.551018 1_1:+55913148 None:intergenic
AAAACAGCTTATTGGGTGGA+AGG 0.552456 1_1:-55912100 Msa0030020:intron
GGAGAGCTATCATGACAAGA+AGG 0.552661 1_1:-55921956 Msa0030020:CDS
GTCTGAAGCTTCAAATGCTG+TGG 0.553322 1_1:-55922589 Msa0030020:CDS
AACGGCAGTCAAACCAGCTA+AGG 0.555116 1_1:+55916069 None:intergenic
TTGTGACGGCTCTAAACAAA+GGG 0.559228 1_1:-55912933 Msa0030020:CDS
CATGACAAGAAGGGCAGTGA+GGG 0.561480 1_1:-55921946 Msa0030020:CDS
TTCAAAACCAGTGGTTGTTG+AGG 0.561727 1_1:-55913155 Msa0030020:CDS
TGTGCCAATCTGCATAACTC+TGG 0.561897 1_1:+55924390 None:intergenic
TACAGATGATGCAGCATCAG+TGG 0.564214 1_1:+55912957 None:intergenic
CAAAGGGCGAGATGTGATCA+TGG 0.564773 1_1:-55912917 Msa0030020:CDS
AGGATTTGTTGATGCTAGTG+AGG 0.566512 1_1:-55924415 Msa0030020:CDS
CATAATGACCCCTATTGTGA+AGG 0.570489 1_1:+55913095 None:intergenic
TCCCCATGGCCCACAGTGAG+AGG 0.573007 1_1:-55913573 Msa0030020:CDS
CTCTCAAAGTTGTGACGTCA+AGG 0.573033 1_1:-55923212 Msa0030020:CDS
TTATTGGGAGCAAGTTAATG+AGG 0.573693 1_1:-55922189 Msa0030020:CDS
TTCGTAGATGGAATCTGCCT+CGG 0.573861 1_1:+55921623 None:intergenic
CAAGGTACTACTGGTAGTGT+TGG 0.576348 1_1:-55925874 Msa0030020:CDS
GATATAGAGAAGCTAAAGAT+GGG 0.576466 1_1:-55922226 Msa0030020:CDS
GGCAGCCAGTGTGAAGCGGA+TGG 0.577451 1_1:+55916093 None:intergenic
AAGTCATTCCAAACAGAACC+AGG 0.577494 1_1:+55911955 None:intergenic
TATATGTTTACAGGAAACAA+AGG 0.580041 1_1:-55913690 Msa0030020:intron
ATCTATCAATATCTAGCCAA+CGG 0.583112 1_1:-55924330 Msa0030020:CDS
CAATGTCGGTAAGGAAGTCA+TGG 0.583739 1_1:-55913596 Msa0030020:CDS
GTGTTGCTGCTTATGGGTGG+AGG 0.584402 1_1:-55923157 Msa0030020:CDS
CCAACTAGCACAATTCTGTA+GGG 0.585039 1_1:+55922110 None:intergenic
GCACTGGACTCCTCTCACTG+TGG 0.586677 1_1:+55913563 None:intergenic
CAGTTTCGAGCATGTCGTCA+TGG 0.587215 1_1:+55922502 None:intergenic
TTGCTACCTTTGGTGGACCA+CGG 0.587632 1_1:+55921826 None:intergenic
GGGTATAGATTAGCCGAGGA+TGG 0.588748 1_1:-55912808 Msa0030020:intron
CCGCCGTTGTCCACAGTGAG+AGG 0.590571 1_1:-55923186 Msa0030020:CDS
TGAATTAGGGTCCTCTCCGT+TGG 0.591979 1_1:+55924314 None:intergenic
TATAAAGCCCTTCACAATAG+GGG 0.592285 1_1:-55913103 Msa0030020:CDS
CCACCTTGGATGTTTGTCGC+CGG 0.592874 1_1:+55916029 None:intergenic
CATGGACAGTACCTTATCAT+GGG 0.593459 1_1:-55912899 Msa0030020:CDS
ACCAACTAGCACAATTCTGT+AGG 0.594431 1_1:+55922109 None:intergenic
GAGAGCTATCATGACAAGAA+GGG 0.596487 1_1:-55921955 Msa0030020:CDS
TCGAATCTCCACCCAAAACA+AGG 0.597177 1_1:-55913905 Msa0030020:CDS
ACAAATATAGGTATCGAATG+GGG 0.597771 1_1:-55922253 Msa0030020:intron
GGCAGTCAAACCAGCTAAGG+AGG 0.601165 1_1:+55916072 None:intergenic
ATAATGACCCCTATTGTGAA+GGG 0.605157 1_1:+55913096 None:intergenic
TGCATCATCTGTACTTGTGA+CGG 0.605659 1_1:-55912947 Msa0030020:CDS
CCAGTGTTGCTGCTTATGGG+TGG 0.605731 1_1:-55923160 Msa0030020:CDS
CACCATTGATTCGACGATGG+AGG 0.606869 1_1:+55925816 None:intergenic
TCAAACAACATACAGCTACA+AGG 0.610579 1_1:-55925892 Msa0030020:CDS
GAGATGAAAACAATCAATGT+CGG 0.611536 1_1:-55913610 Msa0030020:CDS
CTTGTGACGGCTCTAAACAA+AGG 0.613431 1_1:-55912934 Msa0030020:CDS
TAAAGCCATCCGCTTCACAC+TGG 0.615414 1_1:-55916098 Msa0030020:CDS
TGATGTCCGTGGTCCACCAA+AGG 0.616911 1_1:-55921832 Msa0030020:intron
TAGAATTGAGCTAGTTGGCG+TGG 0.618940 1_1:-55912719 Msa0030020:intron
TACAGTTAATGAAAATTACT+GGG 0.620175 1_1:-55912785 Msa0030020:CDS
TGATTCTCACAATCTACAAG+TGG 0.622599 1_1:-55921691 Msa0030020:CDS
TATAAAGCTCTTAACTCTAG+GGG 0.623229 1_1:-55922528 Msa0030020:CDS
TAAGGAAGTCATGGTCCCCA+TGG 0.624317 1_1:-55913587 Msa0030020:CDS
ATACAAAACAGCTTATTGGG+TGG 0.625338 1_1:-55912104 Msa0030020:intron
AGGAGGCAGCCAGTGTGAAG+CGG 0.626046 1_1:+55916089 None:intergenic
TGTTTGTCGCCGGTAATGCG+AGG 0.629149 1_1:+55916039 None:intergenic
AGGATTTGAAGATGCAAGTG+AGG 0.631153 1_1:-55914224 Msa0030020:CDS
TTCCATCTATGAACTTCACA+AGG 0.641657 1_1:-55911998 Msa0030020:CDS
CAAATATAGGTATCGAATGG+GGG 0.646022 1_1:-55922252 Msa0030020:intron
CGGCGACAAACATCCAAGGT+GGG 0.651832 1_1:-55916028 Msa0030020:CDS
CTCCATCGTCGAATCAATGG+TGG 0.653590 1_1:-55925815 Msa0030020:CDS
AATGAAATGCAAAATAACTG+AGG 0.656048 1_1:+55914062 None:intergenic
GATAAGCAGTTTAAATACCG+AGG 0.657474 1_1:-55921640 Msa0030020:CDS
ACACTGGACTCCTCTCACTG+TGG 0.664444 1_1:+55923176 None:intergenic
AGGAGCAGATTCAAAACCAG+TGG 0.665189 1_1:-55913164 Msa0030020:CDS
AATGAAAAGCGAAATAACTG+AGG 0.665453 1_1:+55924253 None:intergenic
GAGCAACCTCACACATGTTG+TGG 0.674543 1_1:-55925842 Msa0030020:CDS
TCATGACAAGAAGGGCAGTG+AGG 0.676129 1_1:-55921947 Msa0030020:CDS
CCAGTGCTACTGTTCATGGG+TGG 0.682018 1_1:-55913547 Msa0030020:CDS
CCTCTCACTGTGGACAACGG+CGG 0.688206 1_1:+55923186 None:intergenic
TTACCGGCGACAAACATCCA+AGG 0.691361 1_1:-55916032 Msa0030020:CDS
TTGTCGCCGGTAATGCGAGG+CGG 0.696315 1_1:+55916042 None:intergenic
TACCACCATTGATTCGACGA+TGG 0.696379 1_1:+55925813 None:intergenic
ACTCCTCTCACTGTGGACAA+CGG 0.700813 1_1:+55923183 None:intergenic
TATTACACGACTGATGTCCG+TGG 0.704279 1_1:-55921843 Msa0030020:CDS
AGTAGGGTATAGATTAGCCG+AGG 0.705324 1_1:-55912812 Msa0030020:intron
TCAATATCTAGCCAACGGAG+AGG 0.708193 1_1:-55924325 Msa0030020:CDS
CCGGCGACAAACATCCAAGG+TGG 0.710700 1_1:-55916029 Msa0030020:CDS
GATGTGGTTTGATGTAAGTG+GGG 0.718477 1_1:+55925775 None:intergenic
AGGCTGCCACAACATGTGTG+AGG 0.761589 1_1:+55925836 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTAAAAAAAAA+GGG + chr1_1:55918895-55918914 None:intergenic 0.0%
!!! ATTTTTTTTTTTAAAAAAAA+AGG + chr1_1:55918896-55918915 None:intergenic 0.0%
!!! TTTTTTTTTAAAAAAAAAAA+TGG - chr1_1:55918895-55918914 Msa0030020:intron 0.0%
!! TTATAAAATGGATAAATATT+TGG - chr1_1:55913039-55913058 Msa0030020:intron 10.0%
!! CTGAAAAAATTTAAAAAAAT+TGG - chr1_1:55917637-55917656 Msa0030020:intron 10.0%
!! TTAAAAAATTAGAAAAAGTT+CGG - chr1_1:55917928-55917947 Msa0030020:intron 10.0%
!!! TTTAATTTTTCTTTTGTAAT+TGG - chr1_1:55918358-55918377 Msa0030020:intron 10.0%
!! TATAAGATATTTAAAAATAC+TGG + chr1_1:55918485-55918504 None:intergenic 10.0%
!! TAAAAAATTAGAAAAAAGTT+CGG + chr1_1:55918523-55918542 None:intergenic 10.0%
!! TTGAAAAAATTAAAAAAAGA+GGG + chr1_1:55919041-55919060 None:intergenic 10.0%
!! TTTGAAAAAATTAAAAAAAG+AGG + chr1_1:55919042-55919061 None:intergenic 10.0%
!!! ATATTAAAAAATGTTTTCAT+TGG + chr1_1:55919567-55919586 None:intergenic 10.0%
!! TAACAAATTAAAATTAAAAG+AGG + chr1_1:55920358-55920377 None:intergenic 10.0%
!!! AACTAAAATGTTTTTAATAT+AGG - chr1_1:55922288-55922307 Msa0030020:intron 10.0%
!!! ACTAAAATGTTTTTAATATA+GGG - chr1_1:55922289-55922308 Msa0030020:intron 10.0%
!!! ATTTTAAAGTCATTAAAATA+AGG - chr1_1:55924678-55924697 Msa0030020:intron 10.0%
!!! GATTTTTTTGATTTTATAAA+TGG + chr1_1:55925487-55925506 None:intergenic 10.0%
!! TATAGAAAAACTATTTAATT+AGG + chr1_1:55925762-55925781 None:intergenic 10.0%
!!! TTTTCTATATGATAAAATAT+TGG - chr1_1:55925773-55925792 Msa0030020:CDS 10.0%
!!! ATATAGAATTTTTTTTGGTA+AGG + chr1_1:55910705-55910724 None:intergenic 15.0%
!! TTACCAAAAAAAATTCTATA+TGG - chr1_1:55910704-55910723 Msa0030020:intron 15.0%
!! ATTATACAAAATAAAGGTTT+GGG + chr1_1:55911235-55911254 None:intergenic 15.0%
!! TAGTTGATTATACAAAATAA+AGG + chr1_1:55911241-55911260 None:intergenic 15.0%
!!! ATATTTTTGAGATGTATTTT+CGG + chr1_1:55912386-55912405 None:intergenic 15.0%
!!! AAAATATAAATGGTTTTAAC+TGG + chr1_1:55912586-55912605 None:intergenic 15.0%
!!! AATTACTCAATGTTTTTTAA+AGG + chr1_1:55912622-55912641 None:intergenic 15.0%
!!! ATAAACTCATTTTCTTAATT+TGG + chr1_1:55913023-55913042 None:intergenic 15.0%
!! AAGAAAATGAGTTTATAAAA+TGG - chr1_1:55913027-55913046 Msa0030020:intron 15.0%
!!! TATTTCTGTAAATTCATTAA+TGG - chr1_1:55913115-55913134 Msa0030020:CDS 15.0%
!! AATCAAAGGAAAATTATAAA+AGG - chr1_1:55913875-55913894 Msa0030020:intron 15.0%
!! ATCAAAGGAAAATTATAAAA+GGG - chr1_1:55913876-55913895 Msa0030020:CDS 15.0%
!!! TATTAGTTATTGTTTTTTGA+TGG + chr1_1:55914550-55914569 None:intergenic 15.0%
!!! TTGTACATATATTATTTCTA+TGG - chr1_1:55914599-55914618 Msa0030020:intron 15.0%
!! TAATAACAAATAATTAGAGT+TGG + chr1_1:55914690-55914709 None:intergenic 15.0%
!! AAATATAACTGAATAATACA+AGG + chr1_1:55915502-55915521 None:intergenic 15.0%
!!! TTTTCGAAACAAAAAAAAAA+TGG + chr1_1:55917566-55917585 None:intergenic 15.0%
!! TTCGAAAAAATTAAAAAAAG+AGG - chr1_1:55917578-55917597 Msa0030020:intron 15.0%
!! TCGAAAAAATTAAAAAAAGA+GGG - chr1_1:55917579-55917598 Msa0030020:intron 15.0%
!! ATTAAAATGATTTAATGATG+TGG + chr1_1:55917731-55917750 None:intergenic 15.0%
!! TAGAAGATATTTAAAAATAC+TGG - chr1_1:55917965-55917984 Msa0030020:intron 15.0%
!!! ATTTTTTTTCTTCAGATTAT+AGG - chr1_1:55918325-55918344 Msa0030020:intron 15.0%
!!! TTTTTTGCGAAATAAAAAAA+TGG + chr1_1:55918430-55918449 None:intergenic 15.0%
!! AAAAAATTAGAAAAAAGTTC+GGG + chr1_1:55918522-55918541 None:intergenic 15.0%
!! AAAAAATAATCTGATTTAGA+TGG - chr1_1:55918754-55918773 Msa0030020:intron 15.0%
!! AAAAATAATCTGATTTAGAT+GGG - chr1_1:55918755-55918774 Msa0030020:intron 15.0%
!!! ATTTTCATAAAAATGTGAAA+GGG + chr1_1:55919432-55919451 None:intergenic 15.0%
!!! TATTTTCATAAAAATGTGAA+AGG + chr1_1:55919433-55919452 None:intergenic 15.0%
!!! AGAAAATTGTTTTATTTGAT+TGG + chr1_1:55920636-55920655 None:intergenic 15.0%
!!! ATGTCTTTTTAGTAAAAATA+TGG + chr1_1:55921501-55921520 None:intergenic 15.0%
!!! AGTAATTAAATTTTGGAATT+TGG + chr1_1:55921749-55921768 None:intergenic 15.0%
!!! CTAAAATGTTTTTAATATAG+GGG - chr1_1:55922290-55922309 Msa0030020:intron 15.0%
!!! TAAAATGTTTTTAATATAGG+GGG - chr1_1:55922291-55922310 Msa0030020:intron 15.0%
!!! TAAATTTGCATTTTAGTATT+TGG - chr1_1:55923419-55923438 Msa0030020:intron 15.0%
!!! TTTTAGTATTTGGAATTATA+AGG - chr1_1:55923429-55923448 Msa0030020:intron 15.0%
!!! TATATAAATATTTTGATGGA+GGG + chr1_1:55923528-55923547 None:intergenic 15.0%
!!! TCACTATATAAATATTTTGA+TGG + chr1_1:55923532-55923551 None:intergenic 15.0%
!! TGGATCTAATAATTAAAATA+AGG - chr1_1:55924621-55924640 Msa0030020:intron 15.0%
!! CAAAACAAGAAAAATAATAA+TGG + chr1_1:55925212-55925231 None:intergenic 15.0%
!! AAAAATAAAGAAATACAAGT+GGG + chr1_1:55925402-55925421 None:intergenic 15.0%
!! TAAAAATAAAGAAATACAAG+TGG + chr1_1:55925403-55925422 None:intergenic 15.0%
!! AAATATTCAAGATAGAATCA+TGG + chr1_1:55910617-55910636 None:intergenic 20.0%
!! ATGTAAATATAACAAGAGTT+GGG + chr1_1:55910730-55910749 None:intergenic 20.0%
!! TATCCAATTTCAAATAACTT+TGG - chr1_1:55910874-55910893 Msa0030020:intron 20.0%
!!! TATCCAAAGTTATTTGAAAT+TGG + chr1_1:55910880-55910899 None:intergenic 20.0%
!!! TTCTTATTTATTTTGAAACC+TGG - chr1_1:55911187-55911206 Msa0030020:intron 20.0%
!! GATTATACAAAATAAAGGTT+TGG + chr1_1:55911236-55911255 None:intergenic 20.0%
!!! ATTTTGCATATAGTGAATTA+GGG + chr1_1:55911728-55911747 None:intergenic 20.0%
!!! AATTTTGCATATAGTGAATT+AGG + chr1_1:55911729-55911748 None:intergenic 20.0%
!!! ACATCTCAAAAATATTCTTT+TGG - chr1_1:55912391-55912410 Msa0030020:intron 20.0%
!! TTAAGTTTCTAATAAGTACA+AGG - chr1_1:55912658-55912677 Msa0030020:intron 20.0%
!! CATAGAATTGAAAGTTTAAA+GGG + chr1_1:55913095-55913114 None:intergenic 20.0%
!! ACATAGAATTGAAAGTTTAA+AGG + chr1_1:55913096-55913115 None:intergenic 20.0%
!! ATATCTTATACAATACACTA+AGG - chr1_1:55913284-55913303 Msa0030020:intron 20.0%
!!! ACTTATCATGTGTTAAATTT+TGG - chr1_1:55913347-55913366 Msa0030020:intron 20.0%
!! TTTCATCCTTGATTATTAAA+TGG - chr1_1:55913396-55913415 Msa0030020:intron 20.0%
!!! TTTTGATGACAAACTAATTA+GGG + chr1_1:55913608-55913627 None:intergenic 20.0%
!!! ATTTTGATGACAAACTAATT+AGG + chr1_1:55913609-55913628 None:intergenic 20.0%
!! CAAGAAATATTCACAAATAT+AGG - chr1_1:55913761-55913780 Msa0030020:intron 20.0%
!! GACAATAACTGAAAATTATT+GGG - chr1_1:55913822-55913841 Msa0030020:intron 20.0%
!!! TGACATTTTTCATTGAAATT+TGG - chr1_1:55914044-55914063 Msa0030020:CDS 20.0%
!! TTAGCATTAATATTGCAAAA+TGG - chr1_1:55914269-55914288 Msa0030020:intron 20.0%
!! CTAATGCTATATATAGATAA+TGG + chr1_1:55916222-55916241 None:intergenic 20.0%
!!! TAGAATCTTTTATTTCAAAG+TGG + chr1_1:55916319-55916338 None:intergenic 20.0%
!!! ATAAAAGATTCTAGTTATGA+TGG - chr1_1:55916326-55916345 Msa0030020:intron 20.0%
!!! TTGATAATTTGTCTCTTATT+TGG + chr1_1:55916460-55916479 None:intergenic 20.0%
!! ATTTCATCAAACAAAACATT+AGG - chr1_1:55916690-55916709 Msa0030020:intron 20.0%
!!! TTGAAGAATTGTTTTATTCT+GGG + chr1_1:55916793-55916812 None:intergenic 20.0%
!!! GACATATAATTTTGATTGAA+AGG + chr1_1:55916816-55916835 None:intergenic 20.0%
!!! TAATTTTATCCACATAGTAT+CGG - chr1_1:55917067-55917086 Msa0030020:intron 20.0%
!! CTATTTATTAAAGAAAACGT+TGG - chr1_1:55917175-55917194 Msa0030020:intron 20.0%
!!! TTTTGTAGTTTTCAAAGATA+GGG + chr1_1:55919258-55919277 None:intergenic 20.0%
!!! AATAGACTTAATACCATTTT+TGG + chr1_1:55917512-55917531 None:intergenic 20.0%
!! TAAGAATGAAAACAAAAATC+TGG - chr1_1:55917669-55917688 Msa0030020:intron 20.0%
!! AATTATAGTTCAAAAGAGAT+TGG - chr1_1:55918143-55918162 Msa0030020:intron 20.0%
!! ATTAAAATGATTGAATGATG+TGG - chr1_1:55918721-55918740 Msa0030020:intron 20.0%
!!! ATTGAAAGAATCTTTTTTAC+AGG - chr1_1:55918821-55918840 Msa0030020:intron 20.0%
!!! TTGAAAGAATCTTTTTTACA+GGG - chr1_1:55918822-55918841 Msa0030020:intron 20.0%
!! TAAGAATGAAAACAAAAATC+TGG + chr1_1:55917669-55917688 None:intergenic 20.0%
!!! TTTTGTAGTTTTCAAAGATA+GGG - chr1_1:55919258-55919277 Msa0030020:intron 20.0%
!!! TTTTTTAATATGTAGAAAGC+TGG - chr1_1:55919576-55919595 Msa0030020:intron 20.0%
!! AAATATGCATAAGTTCAATT+TGG - chr1_1:55919825-55919844 Msa0030020:intron 20.0%
!!! AGATTGTTTTATATCTACTT+GGG + chr1_1:55920044-55920063 None:intergenic 20.0%
!!! TAAAACATGTTATTTTAAGC+CGG + chr1_1:55920413-55920432 None:intergenic 20.0%
!! AATAGTTGAGACTTAAAATA+TGG - chr1_1:55920447-55920466 Msa0030020:intron 20.0%
!! AAAACTAAATCATTCGAAAT+TGG + chr1_1:55920512-55920531 None:intergenic 20.0%
!!! TGTATCTCTATTTTTTTTTG+AGG - chr1_1:55920694-55920713 Msa0030020:intron 20.0%
!!! ATACTTTATTCTAGATTTTG+CGG + chr1_1:55920855-55920874 None:intergenic 20.0%
!!! AAATAAACAGTGCTATTTAA+CGG - chr1_1:55920880-55920899 Msa0030020:intron 20.0%
!! TTTACTAAAAAGACATGATA+AGG - chr1_1:55921505-55921524 Msa0030020:intron 20.0%
!!! TTTTGTCCATCTAAATATAA+TGG + chr1_1:55921620-55921639 None:intergenic 20.0%
!!! AAGCGAAAGTAATTAAATTT+TGG + chr1_1:55921756-55921775 None:intergenic 20.0%
!! AAAAGAAAATGTATAATGCA+TGG + chr1_1:55922028-55922047 None:intergenic 20.0%
!! ACAATAGTAATATCACATTA+AGG + chr1_1:55923002-55923021 None:intergenic 20.0%
!! TCACAAATATAAATACAGAA+TGG - chr1_1:55923190-55923209 Msa0030020:CDS 20.0%
!! CACAAATATAAATACAGAAT+GGG - chr1_1:55923191-55923210 Msa0030020:CDS 20.0%
!! TACAGTTAATGAAAATTACT+GGG - chr1_1:55923241-55923260 Msa0030020:CDS 20.0%
!!! CAACTATAATTGTATACTTT+TGG - chr1_1:55923375-55923394 Msa0030020:intron 20.0%
!!! ATGTTATTTTGCAAATATGA+GGG + chr1_1:55923470-55923489 None:intergenic 20.0%
!!! AATGTTATTTTGCAAATATG+AGG + chr1_1:55923471-55923490 None:intergenic 20.0%
!!! TTGATTGTTTTTCAATGTAA+GGG + chr1_1:55923499-55923518 None:intergenic 20.0%
!!! ATTGATTGTTTTTCAATGTA+AGG + chr1_1:55923500-55923519 None:intergenic 20.0%
!!! CTATATAAATATTTTGATGG+AGG + chr1_1:55923529-55923548 None:intergenic 20.0%
!!! AGACTTTTCTATTTTAAGAA+TGG + chr1_1:55924144-55924163 None:intergenic 20.0%
!! TATATATCATAGAACTGAAA+TGG + chr1_1:55924301-55924320 None:intergenic 20.0%
!! TTTCAGTTCTATGATATATA+TGG - chr1_1:55924301-55924320 Msa0030020:CDS 20.0%
!! ATTTATTCTCTAATATGTCA+AGG - chr1_1:55924986-55925005 Msa0030020:intron 20.0%
!! TTAAAACATAGAGAATGAAT+AGG + chr1_1:55925067-55925086 None:intergenic 20.0%
!! AAAATAAAGAAATACAAGTG+GGG + chr1_1:55925401-55925420 None:intergenic 20.0%
!!! TTCTTATTTTAGTAAGTCAT+GGG + chr1_1:55925587-55925606 None:intergenic 20.0%
!!! TTTCTTATTTTAGTAAGTCA+TGG + chr1_1:55925588-55925607 None:intergenic 20.0%
!!! TCAAGAGTTTTTTTTTTTAG+AGG + chr1_1:55925838-55925857 None:intergenic 20.0%
!!! TAAGTGCATGTTTTTATTGT+CGG - chr1_1:55910512-55910531 Msa0030020:intron 25.0%
! GAAACTTACATATAGACAAA+AGG + chr1_1:55910661-55910680 None:intergenic 25.0%
!!! TAGAATTTTTTTTGGTAAGG+CGG + chr1_1:55910702-55910721 None:intergenic 25.0%
! CATGTAAATATAACAAGAGT+TGG + chr1_1:55910731-55910750 None:intergenic 25.0%
!! CAACTCTTGTTATATTTACA+TGG - chr1_1:55910729-55910748 Msa0030020:intron 25.0%
!! GGATAAATTTTGCTTTCTAA+GGG + chr1_1:55910859-55910878 None:intergenic 25.0%
!! TGGATAAATTTTGCTTTCTA+AGG + chr1_1:55910860-55910879 None:intergenic 25.0%
!!! AAATAAGAAAAAAGTGCTGT+TGG + chr1_1:55911176-55911195 None:intergenic 25.0%
!! TGAAATGAAAAAGACTAGTT+AGG - chr1_1:55911308-55911327 Msa0030020:intron 25.0%
!! TTTAAAGTCTTGGATATGTT+TGG + chr1_1:55911386-55911405 None:intergenic 25.0%
!! TTAAACCACATGTCTTTTAT+TGG - chr1_1:55911401-55911420 Msa0030020:intron 25.0%
! TCTATCATTGAATGAAACAT+TGG - chr1_1:55911438-55911457 Msa0030020:intron 25.0%
! GACAAGAAAGTAAAAACAAA+TGG - chr1_1:55911488-55911507 Msa0030020:intron 25.0%
! AACGAGAAAAGTAAATGAAT+TGG + chr1_1:55911854-55911873 None:intergenic 25.0%
! AACTATAAAAAGAGAAAGTG+AGG + chr1_1:55912095-55912114 None:intergenic 25.0%
! TTCACTTATCAACTTTATCA+GGG + chr1_1:55912216-55912235 None:intergenic 25.0%
! ATTCACTTATCAACTTTATC+AGG + chr1_1:55912217-55912236 None:intergenic 25.0%
! AGTCATATAAAAAAACTGCA+TGG + chr1_1:55912293-55912312 None:intergenic 25.0%
! TTCGATATAAATTTACCTTG+TGG + chr1_1:55912420-55912439 None:intergenic 25.0%
!!! TCGAAGCCAATTATTTTTAA+CGG - chr1_1:55912505-55912524 Msa0030020:intron 25.0%
! CATATTAGTGAATAATGATG+TGG + chr1_1:55912689-55912708 None:intergenic 25.0%
! CACATCATTATTCACTAATA+TGG - chr1_1:55912687-55912706 Msa0030020:intron 25.0%
! AGAAGAGATTAAAGCAATAA+AGG - chr1_1:55912787-55912806 Msa0030020:CDS 25.0%
! GAAGAGATTAAAGCAATAAA+GGG - chr1_1:55912788-55912807 Msa0030020:CDS 25.0%
! TTTAACACATGATAAGTAAG+AGG + chr1_1:55913344-55913363 None:intergenic 25.0%
! CCAAAACCATTTAATAATCA+AGG + chr1_1:55913405-55913424 None:intergenic 25.0%
!! CCTTGATTATTAAATGGTTT+TGG - chr1_1:55913402-55913421 Msa0030020:intron 25.0%
! TATATAAAGCTCTTAACTCT+AGG - chr1_1:55913496-55913515 Msa0030020:intron 25.0%
! ATATAAAGCTCTTAACTCTA+GGG - chr1_1:55913497-55913516 Msa0030020:intron 25.0%
! TTTGTCATCAAAATCTAAAC+AGG - chr1_1:55913615-55913634 Msa0030020:CDS 25.0%
! GGACAATAACTGAAAATTAT+TGG - chr1_1:55913821-55913840 Msa0030020:intron 25.0%
!! TTTTTCATTGAAATTTGGAC+AGG - chr1_1:55914049-55914068 Msa0030020:CDS 25.0%
!! TCAACAAGTTTGCAATATTT+TGG + chr1_1:55914150-55914169 None:intergenic 25.0%
! TTCATTATAAAGTTCGTAGA+TGG + chr1_1:55914418-55914437 None:intergenic 25.0%
!!! GGTTTTTTCTATTTTCAGAA+TGG + chr1_1:55914529-55914548 None:intergenic 25.0%
!!! CTTTATTTTCAGCTCTAATT+TGG - chr1_1:55914757-55914776 Msa0030020:intron 25.0%
!! AAAAGTATATTGATGATTCC+CGG - chr1_1:55914831-55914850 Msa0030020:intron 25.0%
! ACTAAAATACTGTTATAACC+GGG + chr1_1:55914852-55914871 None:intergenic 25.0%
! CACTAAAATACTGTTATAAC+CGG + chr1_1:55914853-55914872 None:intergenic 25.0%
!!! ACAGTATTTTAGTGTAGTTT+TGG - chr1_1:55914859-55914878 Msa0030020:intron 25.0%
! CTGTTAGATTTCTTTAGATT+AGG - chr1_1:55915406-55915425 Msa0030020:intron 25.0%
! AGCAAATCATAAACCAAATT+GGG + chr1_1:55915874-55915893 None:intergenic 25.0%
! AAGCAAATCATAAACCAAAT+TGG + chr1_1:55915875-55915894 None:intergenic 25.0%
! TATATACTTTGCAGAAATAG+AGG - chr1_1:55915895-55915914 Msa0030020:intron 25.0%
! ATTATATCTTGTGATCTCTT+TGG + chr1_1:55916061-55916080 None:intergenic 25.0%
! ATAAAAGAGTAATAGAGAAG+AGG - chr1_1:55916121-55916140 Msa0030020:intron 25.0%
! TTATTTCAAAGTGGAATTGT+TGG + chr1_1:55916310-55916329 None:intergenic 25.0%
! TTTCTAACGTAAACATTTCA+AGG + chr1_1:55916537-55916556 None:intergenic 25.0%
!!! GACATTTTTAAAATGTTTCG+TGG - chr1_1:55916732-55916751 Msa0030020:intron 25.0%
!!! GTTGAAGAATTGTTTTATTC+TGG + chr1_1:55916794-55916813 None:intergenic 25.0%
! ATCAAAATTATATGTCTGTG+TGG - chr1_1:55916820-55916839 Msa0030020:intron 25.0%
! TCAAAATTATATGTCTGTGT+GGG - chr1_1:55916821-55916840 Msa0030020:intron 25.0%
! TTAGTATGATCGAAAGTAAA+AGG + chr1_1:55916883-55916902 None:intergenic 25.0%
! AAAATCGAAGGAAATAAAGT+AGG + chr1_1:55916969-55916988 None:intergenic 25.0%
!! TCATCCTCTAAAAAAAATGT+AGG - chr1_1:55917284-55917303 Msa0030020:intron 25.0%
!!! TAAGCCTACATTTTTTTTAG+AGG + chr1_1:55917291-55917310 None:intergenic 25.0%
!! TTTGTAGTTTTCAAAGATAG+GGG + chr1_1:55919259-55919278 None:intergenic 25.0%
!! GTTTTGTAGTTTTCAAAGAT+AGG + chr1_1:55919257-55919276 None:intergenic 25.0%
!! ATTCTTTTGCGAAAAAAAAC+TGG - chr1_1:55918018-55918037 Msa0030020:intron 25.0%
! GAAAGAATCTTCATATTTCA+GGG - chr1_1:55918793-55918812 Msa0030020:intron 25.0%
!!! TGAAAGAATCTTTTTTACAG+GGG - chr1_1:55918823-55918842 Msa0030020:intron 25.0%
!! GTTTTGTAGTTTTCAAAGAT+AGG - chr1_1:55919257-55919276 Msa0030020:intron 25.0%
!! TTTGTAGTTTTCAAAGATAG+GGG - chr1_1:55919259-55919278 Msa0030020:intron 25.0%
!! TGATGATCTCAATACATTTT+TGG + chr1_1:55919334-55919353 None:intergenic 25.0%
! GATGACAAAAATTAAAGTCT+AGG + chr1_1:55919368-55919387 None:intergenic 25.0%
! AAGAGAAGTAACATTAATCA+AGG - chr1_1:55919693-55919712 Msa0030020:intron 25.0%
!!! ACCATTTTTTGTTATTCAGA+TGG - chr1_1:55919896-55919915 Msa0030020:intron 25.0%
! ACCATCTGAATAACAAAAAA+TGG + chr1_1:55919900-55919919 None:intergenic 25.0%
!!! GATTGTTTTATATCTACTTG+GGG + chr1_1:55920043-55920062 None:intergenic 25.0%
!!! CAGATTGTTTTATATCTACT+TGG + chr1_1:55920045-55920064 None:intergenic 25.0%
! CAAGTAGATATAAAACAATC+TGG - chr1_1:55920043-55920062 Msa0030020:intron 25.0%
!!! ATTTTGAGACACTATCATTT+TGG + chr1_1:55920274-55920293 None:intergenic 25.0%
! TTAATATTTACTTTCTGCAC+CGG + chr1_1:55920334-55920353 None:intergenic 25.0%
!!! TCTCAACTATTTATTTTGAC+GGG + chr1_1:55920438-55920457 None:intergenic 25.0%
!!! GTCTCAACTATTTATTTTGA+CGG + chr1_1:55920439-55920458 None:intergenic 25.0%
!! AGACTTAAAATATGGACTAT+CGG - chr1_1:55920455-55920474 Msa0030020:intron 25.0%
!!! AATAAACAGTGCTATTTAAC+GGG - chr1_1:55920881-55920900 Msa0030020:intron 25.0%
! AGAGATTTGATAGATTTGAT+TGG + chr1_1:55920934-55920953 None:intergenic 25.0%
! ATGTTTATTTATCCTTCAAG+AGG + chr1_1:55921139-55921158 None:intergenic 25.0%
!!! ATATTTTTGAAGGATGGTAT+TGG + chr1_1:55921174-55921193 None:intergenic 25.0%
! CCATCTAAATATAATGGTAA+GGG + chr1_1:55921614-55921633 None:intergenic 25.0%
! TCCATCTAAATATAATGGTA+AGG + chr1_1:55921615-55921634 None:intergenic 25.0%
!! ATTCTAGAAAATCAGAAAGA+TGG - chr1_1:55921707-55921726 Msa0030020:CDS 25.0%
! TGAATCTCTTTATGTTAAGT+TGG - chr1_1:55921919-55921938 Msa0030020:CDS 25.0%
! AATGAAATGCAAAATAACTG+AGG + chr1_1:55921967-55921986 None:intergenic 25.0%
!!! TCAGTTATTTTGCATTTCAT+TGG - chr1_1:55921966-55921985 Msa0030020:intron 25.0%
!! AAGGCTGAAAGAAATTATTT+TGG - chr1_1:55922140-55922159 Msa0030020:CDS 25.0%
! TTATAGAGTAAACACTTCAA+AGG - chr1_1:55922265-55922284 Msa0030020:intron 25.0%
! TAAGTGATGTATATGTTTAC+AGG - chr1_1:55922327-55922346 Msa0030020:intron 25.0%
! TATATGTTTACAGGAAACAA+AGG - chr1_1:55922336-55922355 Msa0030020:intron 25.0%
! TGCTTGAAAATTCCTATTTA+TGG + chr1_1:55922724-55922743 None:intergenic 25.0%
! TAAACAAAACGTTCTTACAT+CGG + chr1_1:55922809-55922828 None:intergenic 25.0%
!!! CGTTTTGTTTATGTATGAAA+TGG - chr1_1:55922818-55922837 Msa0030020:intron 25.0%
! GTACAGTTAATGAAAATTAC+TGG - chr1_1:55923240-55923259 Msa0030020:CDS 25.0%
!!! GTATTGACTTAAAGATTTGA+GGG - chr1_1:55923567-55923586 Msa0030020:intron 25.0%
!!! TATTGACTTAAAGATTTGAG+GGG - chr1_1:55923568-55923587 Msa0030020:intron 25.0%
! TAACACTTAACATTTCCTAT+TGG - chr1_1:55923659-55923678 Msa0030020:CDS 25.0%
!!! TTTCCTATTGGAATTTTAAC+AGG - chr1_1:55923671-55923690 Msa0030020:intron 25.0%
! AAAATGTTCATGTTTACCTT+TGG + chr1_1:55923835-55923854 None:intergenic 25.0%
! CTAGTATTAAAATGTGAAGA+TGG - chr1_1:55923885-55923904 Msa0030020:intron 25.0%
! TTTCATACAAAACAGCTTAT+TGG - chr1_1:55923918-55923937 Msa0030020:intron 25.0%
! TTCATACAAAACAGCTTATT+GGG - chr1_1:55923919-55923938 Msa0030020:intron 25.0%
!! TTCAAGCTTTTTATATCTTC+AGG + chr1_1:55923978-55923997 None:intergenic 25.0%
! ATTCTGTGATTTACTAAGAT+AGG - chr1_1:55924243-55924262 Msa0030020:CDS 25.0%
! ATTATTAGATCCAACAATCT+AGG + chr1_1:55924614-55924633 None:intergenic 25.0%
!!! ATAAATCCGATTTGGTTTTT+CGG + chr1_1:55924972-55924991 None:intergenic 25.0%
! ATTAGAGAATAAATCCGATT+TGG + chr1_1:55924980-55924999 None:intergenic 25.0%
!!! CATTCTCTATGTTTTAATTC+TGG - chr1_1:55925070-55925089 Msa0030020:intron 25.0%
! AAATAAAGAAATACAAGTGG+GGG + chr1_1:55925400-55925419 None:intergenic 25.0%
! AGAAAGAAAATGCTTTCTAA+TGG - chr1_1:55925603-55925622 Msa0030020:intron 25.0%
!!! TTTTTTTTAGAGGATGTCAA+GGG + chr1_1:55925828-55925847 None:intergenic 25.0%
!!! TTTTTTTTTAGAGGATGTCA+AGG + chr1_1:55925829-55925848 None:intergenic 25.0%
! TAAGAATGTAATAGCTAGTT+CGG + chr1_1:55925913-55925932 None:intergenic 25.0%
GTGAGAGAATATCTCAATTT+GGG + chr1_1:55910288-55910307 None:intergenic 30.0%
AGTGAGAGAATATCTCAATT+TGG + chr1_1:55910289-55910308 None:intergenic 30.0%
AAAACATGCACTTACTAAGT+TGG + chr1_1:55910506-55910525 None:intergenic 30.0%
!! TGTTTTTATTGTCGGTGAAT+TGG - chr1_1:55910520-55910539 Msa0030020:intron 30.0%
TGTAGCTTTCCTTAAAATCA+AGG - chr1_1:55910584-55910603 Msa0030020:intron 30.0%
ATAGACAAAAGGAAGATTTC+AGG + chr1_1:55910650-55910669 None:intergenic 30.0%
TTGTCTATATGTAAGTTTCC+AGG - chr1_1:55910662-55910681 Msa0030020:intron 30.0%
!!! GGGCCATATAGAATTTTTTT+TGG + chr1_1:55910710-55910729 None:intergenic 30.0%
TTAATTGTTTACATGGCTAC+AGG + chr1_1:55910755-55910774 None:intergenic 30.0%
AAAACATGAAACAAGGGATT+GGG + chr1_1:55910801-55910820 None:intergenic 30.0%
AGGTTGAAAACATGAAACAA+GGG + chr1_1:55910807-55910826 None:intergenic 30.0%
AAGGTTGAAAACATGAAACA+AGG + chr1_1:55910808-55910827 None:intergenic 30.0%
TTGATACTAATTAGCTGACA+AGG + chr1_1:55910827-55910846 None:intergenic 30.0%
!! ATTGTTTTGTAAGAACAACC+AGG + chr1_1:55911208-55911227 None:intergenic 30.0%
! ACTTTTTAACACCGATCATA+AGG + chr1_1:55911284-55911303 None:intergenic 30.0%
!! TTATGATCGGTGTTAAAAAG+TGG - chr1_1:55911283-55911302 Msa0030020:intron 30.0%
GTATAGTGAAATTGAATGGA+AGG + chr1_1:55911356-55911375 None:intergenic 30.0%
GATGGTATAGTGAAATTGAA+TGG + chr1_1:55911360-55911379 None:intergenic 30.0%
ATTGAATGAAACATTGGAGT+AGG - chr1_1:55911444-55911463 Msa0030020:intron 30.0%
TGATGATAATCTCAAAGTAC+AGG - chr1_1:55911530-55911549 Msa0030020:intron 30.0%
! CTTTTCATGAATTGAATCCA+TGG - chr1_1:55911555-55911574 Msa0030020:intron 30.0%
ATCTATCAATATCTAGCCAA+CGG - chr1_1:55911696-55911715 Msa0030020:intron 30.0%
AATGAAAAGCGAAATAACTG+AGG + chr1_1:55911776-55911795 None:intergenic 30.0%
!! TCAGTTATTTCGCTTTTCAT+TGG - chr1_1:55911775-55911794 Msa0030020:intron 30.0%
GACTAATGATATATGAAGCT+TGG + chr1_1:55911803-55911822 None:intergenic 30.0%
AGCTTCATATATCATTAGTC+AGG - chr1_1:55911803-55911822 Msa0030020:intron 30.0%
!!! TTTCGGTGGTTAGTTTTTAT+TGG + chr1_1:55911910-55911929 None:intergenic 30.0%
!!! TGTTTTTCGGGTGTTTATTT+GGG + chr1_1:55912121-55912140 None:intergenic 30.0%
! ATGTTGGGATAAGTGTTTTT+CGG + chr1_1:55912134-55912153 None:intergenic 30.0%
GTGGAATTCAAATGAATGTT+GGG + chr1_1:55912149-55912168 None:intergenic 30.0%
AGTGGAATTCAAATGAATGT+TGG + chr1_1:55912150-55912169 None:intergenic 30.0%
!!! GTTTTGATTCTCTCAATCAT+AGG - chr1_1:55912340-55912359 Msa0030020:intron 30.0%
!! TTTGAGATGTATTTTCGGTT+GGG + chr1_1:55912381-55912400 None:intergenic 30.0%
!!! TTTTGAGATGTATTTTCGGT+TGG + chr1_1:55912382-55912401 None:intergenic 30.0%
!! TAATATGGTGCTATGTTTAC+AGG - chr1_1:55912702-55912721 Msa0030020:intron 30.0%
!! AATATGGTGCTATGTTTACA+GGG - chr1_1:55912703-55912722 Msa0030020:intron 30.0%
ACAATGGTATTGTATTGAAG+TGG + chr1_1:55912961-55912980 None:intergenic 30.0%
! TTTCTTAATTTGGACACACA+TGG + chr1_1:55913013-55913032 None:intergenic 30.0%
! TTTCCTATAGACATTGGTTA+AGG - chr1_1:55913152-55913171 Msa0030020:CDS 30.0%
ATTCCTTAACCAATGTCTAT+AGG + chr1_1:55913158-55913177 None:intergenic 30.0%
! TATTCTTAGCGCATTTGTTA+AGG + chr1_1:55913252-55913271 None:intergenic 30.0%
!!! TTCATAGTTTTTTTCGTTGG+GGG + chr1_1:55913321-55913340 None:intergenic 30.0%
!!! GTTCATAGTTTTTTTCGTTG+GGG + chr1_1:55913322-55913341 None:intergenic 30.0%
!!! GGTTCATAGTTTTTTTCGTT+GGG + chr1_1:55913323-55913342 None:intergenic 30.0%
!!! AGGTTCATAGTTTTTTTCGT+TGG + chr1_1:55913324-55913343 None:intergenic 30.0%
TAGAAGAAAAGAAAAGCGAA+TGG + chr1_1:55913375-55913394 None:intergenic 30.0%
TATAAAGCTCTTAACTCTAG+GGG - chr1_1:55913498-55913517 Msa0030020:intron 30.0%
TTTGTGAATATTTCTTGCCA+TGG + chr1_1:55913758-55913777 None:intergenic 30.0%
!! TCACAAATATAGGTATCGAA+TGG - chr1_1:55913771-55913790 Msa0030020:intron 30.0%
!! CACAAATATAGGTATCGAAT+GGG - chr1_1:55913772-55913791 Msa0030020:intron 30.0%
!! ACAAATATAGGTATCGAATG+GGG - chr1_1:55913773-55913792 Msa0030020:intron 30.0%
GATATAGAGAAGCTAAAGAT+GGG - chr1_1:55913800-55913819 Msa0030020:intron 30.0%
! AACAGTTTTGCATACTATCT+TGG - chr1_1:55914222-55914241 Msa0030020:CDS 30.0%
ATTCTATTAACTGCAGTATG+TGG + chr1_1:55914308-55914327 None:intergenic 30.0%
ACATACTGCAGTTAATAGAA+TGG - chr1_1:55914307-55914326 Msa0030020:intron 30.0%
AAGTGATGTGGAAAACTTAA+GGG - chr1_1:55914500-55914519 Msa0030020:intron 30.0%
TGTATATTTAGTGCTACCAT+TGG - chr1_1:55914732-55914751 Msa0030020:intron 30.0%
ATGTATTGTGTGATCTCTTT+GGG - chr1_1:55915006-55915025 Msa0030020:intron 30.0%
TTGATATTGTGGAACAACTT+GGG + chr1_1:55915189-55915208 None:intergenic 30.0%
CTAACAGCTCATAATCAAAA+GGG + chr1_1:55915393-55915412 None:intergenic 30.0%
TCTAACAGCTCATAATCAAA+AGG + chr1_1:55915394-55915413 None:intergenic 30.0%
!! AAGAGTACTCAACAATTACA+TGG + chr1_1:55915464-55915483 None:intergenic 30.0%
GTATGTGTAGCTAAATTTCT+TGG + chr1_1:55915715-55915734 None:intergenic 30.0%
GCAAATCATAAACCAAATTG+GGG + chr1_1:55915873-55915892 None:intergenic 30.0%
!! AGAGGAATTTGTTAAGCAAA+TGG - chr1_1:55915913-55915932 Msa0030020:intron 30.0%
!! GAGGAATTTGTTAAGCAAAT+GGG - chr1_1:55915914-55915933 Msa0030020:intron 30.0%
!! GTTTTGATCCAAATTCACAA+AGG + chr1_1:55915987-55916006 None:intergenic 30.0%
AACCAATAAACTTTGATCCA+TGG - chr1_1:55916010-55916029 Msa0030020:CDS 30.0%
TTCCATGGATCAAAGTTTAT+TGG + chr1_1:55916015-55916034 None:intergenic 30.0%
!!! GTTGTTTTTCGATTCAATTG+TGG + chr1_1:55916101-55916120 None:intergenic 30.0%
AACACACAATATTGTTTACC+CGG - chr1_1:55916147-55916166 Msa0030020:intron 30.0%
AGTAGAAAGATGTGAATCTT+GGG + chr1_1:55916180-55916199 None:intergenic 30.0%
TAGTAGAAAGATGTGAATCT+TGG + chr1_1:55916181-55916200 None:intergenic 30.0%
GGTACTCAAAATCTAATTGT+TGG - chr1_1:55916347-55916366 Msa0030020:intron 30.0%
!! CAAAACATTAGGTTGAATCA+CGG - chr1_1:55916701-55916720 Msa0030020:intron 30.0%
! TGCAACAATTTTCAGTTTTG+TGG - chr1_1:55916766-55916785 Msa0030020:intron 30.0%
GAAAATTAGTAACACGTGAA+TGG + chr1_1:55916926-55916945 None:intergenic 30.0%
!! AGTAGGAGAAAAAGTGTTAA+AGG + chr1_1:55916952-55916971 None:intergenic 30.0%
TCATTGTGAAAGAAAATCGA+AGG + chr1_1:55916981-55917000 None:intergenic 30.0%
! TCGCAATTTTGTCAAACATA+GGG + chr1_1:55919289-55919308 None:intergenic 30.0%
! ATCGCAATTTTGTCAAACAT+AGG + chr1_1:55919288-55919307 None:intergenic 30.0%
! GTTTGACAAAATTGCGATTT+TGG - chr1_1:55917332-55917351 Msa0030020:intron 30.0%
! TTGTAGTTTTCAAAGATAGG+GGG + chr1_1:55919260-55919279 None:intergenic 30.0%
CGAAAGAATCTTCATATTTC+AGG - chr1_1:55918792-55918811 Msa0030020:intron 30.0%
!!! GAAAGAATCTTTTTTACAGG+GGG - chr1_1:55918824-55918843 Msa0030020:intron 30.0%
!!! AAAGAATCTTTTTTACAGGG+GGG - chr1_1:55918825-55918844 Msa0030020:intron 30.0%
! AAAAGGCTTAATAGCACTTT+TGG - chr1_1:55919106-55919125 Msa0030020:intron 30.0%
! TTGTAGTTTTCAAAGATAGG+GGG - chr1_1:55919260-55919279 Msa0030020:intron 30.0%
! GTTTGACAAAATTGCGATTT+TGG + chr1_1:55917332-55917351 None:intergenic 30.0%
! ATCGCAATTTTGTCAAACAT+AGG - chr1_1:55919288-55919307 Msa0030020:intron 30.0%
! TCGCAATTTTGTCAAACATA+GGG - chr1_1:55919289-55919308 Msa0030020:intron 30.0%
!!! TTTTGGCTTAATAGCACTTT+TGG + chr1_1:55919317-55919336 None:intergenic 30.0%
ATTTATGATGTACGTATGAC+GGG + chr1_1:55919490-55919509 None:intergenic 30.0%
CATTTATGATGTACGTATGA+CGG + chr1_1:55919491-55919510 None:intergenic 30.0%
TGACATTATCAACTAACGTA+AGG - chr1_1:55919521-55919540 Msa0030020:intron 30.0%
TACGGTCAACTTAATTAATC+TGG - chr1_1:55919602-55919621 Msa0030020:intron 30.0%
TTTGAATCTCCAACAAGATA+TGG - chr1_1:55919763-55919782 Msa0030020:intron 30.0%
! TGTTATTCAGATGGTTCTAT+TGG - chr1_1:55919905-55919924 Msa0030020:intron 30.0%
GAAAAATTCTCTGACTATGT+TGG - chr1_1:55920082-55920101 Msa0030020:intron 30.0%
TTGCAAGAGAATTCACAAAA+AGG + chr1_1:55920117-55920136 None:intergenic 30.0%
!!! TTTCTAGTTTTCTACACTAC+TGG + chr1_1:55920297-55920316 None:intergenic 30.0%
AGAAAAGTTTAATGATCCAC+CGG - chr1_1:55920312-55920331 Msa0030020:intron 30.0%
!! TTCTAACACAGTTTTTCAAC+CGG - chr1_1:55920391-55920410 Msa0030020:intron 30.0%
! GACTTAAAATATGGACTATC+GGG - chr1_1:55920456-55920475 Msa0030020:intron 30.0%
!! TTTGATTGGCTGTAATTTTG+AGG + chr1_1:55920622-55920641 None:intergenic 30.0%
! TTGATTGGTTAATTGTGCTT+CGG + chr1_1:55920919-55920938 None:intergenic 30.0%
AAATCTATCAAATCTCTTCC+TGG - chr1_1:55920937-55920956 Msa0030020:intron 30.0%
AATCTATCAAATCTCTTCCT+GGG - chr1_1:55920938-55920957 Msa0030020:intron 30.0%
! CTTTTCAATTGAGCTATCAT+TGG - chr1_1:55921235-55921254 Msa0030020:intron 30.0%
!! AGTTTCTGGAATGGATTAAT+AGG + chr1_1:55921278-55921297 None:intergenic 30.0%
TATTAATCCATTCCAGAAAC+TGG - chr1_1:55921277-55921296 Msa0030020:intron 30.0%
ATTAATCCATTCCAGAAACT+GGG - chr1_1:55921278-55921297 Msa0030020:intron 30.0%
AATATTTCACGTCTTTGTTG+TGG - chr1_1:55921374-55921393 Msa0030020:intron 30.0%
! ATATTTCACGTCTTTGTTGT+GGG - chr1_1:55921375-55921394 Msa0030020:intron 30.0%
CCCTTACCATTATATTTAGA+TGG - chr1_1:55921611-55921630 Msa0030020:CDS 30.0%
GGATTTCTGTAGATATTCTT+GGG + chr1_1:55921849-55921868 None:intergenic 30.0%
TGGATTTCTGTAGATATTCT+TGG + chr1_1:55921850-55921869 None:intergenic 30.0%
TGAACCTGACTAATGATATA+TGG + chr1_1:55922001-55922020 None:intergenic 30.0%
!!! ATTTCTTTCAGCCTTGTTTT+GGG + chr1_1:55922135-55922154 None:intergenic 30.0%
!!! AATTTCTTTCAGCCTTGTTT+TGG + chr1_1:55922136-55922155 None:intergenic 30.0%
!!! AAATTATTTTGGCAGCTACA+AGG - chr1_1:55922151-55922170 Msa0030020:CDS 30.0%
GAGATGAAAACAATCAATGT+CGG - chr1_1:55922416-55922435 Msa0030020:intron 30.0%
!! CCAAGACAGATTTAATTTGT+AGG + chr1_1:55922604-55922623 None:intergenic 30.0%
CCTACAAATTAAATCTGTCT+TGG - chr1_1:55922601-55922620 Msa0030020:CDS 30.0%
GTTTATGTATGAAATGGCTT+TGG - chr1_1:55922824-55922843 Msa0030020:intron 30.0%
TATATAAAGCCCTTCACAAT+AGG - chr1_1:55922921-55922940 Msa0030020:intron 30.0%
ATATAAAGCCCTTCACAATA+GGG - chr1_1:55922922-55922941 Msa0030020:intron 30.0%
AAACATGTCAAATTCTGAAC+AGG - chr1_1:55923034-55923053 Msa0030020:intron 30.0%
TATAAATACAGAATGGGAGT+AGG - chr1_1:55923197-55923216 Msa0030020:CDS 30.0%
ATAAATACAGAATGGGAGTA+GGG - chr1_1:55923198-55923217 Msa0030020:CDS 30.0%
!!! ACTTTTGGTAGTGTGATTTT+TGG - chr1_1:55923390-55923409 Msa0030020:intron 30.0%
!! CGTATTGACTTAAAGATTTG+AGG - chr1_1:55923566-55923585 Msa0030020:intron 30.0%
GTCTTCGAAAATGTAAAAGT+CGG + chr1_1:55923603-55923622 None:intergenic 30.0%
TCTCCTGTTAAAATTCCAAT+AGG + chr1_1:55923677-55923696 None:intergenic 30.0%
TTTATTGCACAAACGATGTT+GGG - chr1_1:55923803-55923822 Msa0030020:intron 30.0%
TGGTGATAACAATCTATTAG+TGG - chr1_1:55923950-55923969 Msa0030020:intron 30.0%
AAGTGTTCAGAAAGAGTTAA+GGG - chr1_1:55924115-55924134 Msa0030020:intron 30.0%
TTACTCTCTTATGAGTTATG+AGG - chr1_1:55924183-55924202 Msa0030020:intron 30.0%
TTACTAAGATAGGACAGAAA+AGG - chr1_1:55924253-55924272 Msa0030020:CDS 30.0%
!! AGAAAAGGCTTTTAATGGAT+TGG - chr1_1:55924268-55924287 Msa0030020:CDS 30.0%
TGCAAAATGATAGAGTAACT+CGG + chr1_1:55924497-55924516 None:intergenic 30.0%
! ATTTTGTTGCATCCAAATTC+TGG - chr1_1:55924804-55924823 Msa0030020:intron 30.0%
! TTTTGTTGCATCCAAATTCT+GGG - chr1_1:55924805-55924824 Msa0030020:intron 30.0%
AACAACGCAAAACAAATCTT+AGG + chr1_1:55924867-55924886 None:intergenic 30.0%
!!! TAAATCCGATTTGGTTTTTC+GGG + chr1_1:55924971-55924990 None:intergenic 30.0%
TCTGGAAAGTTAAGTTTGAA+AGG - chr1_1:55925088-55925107 Msa0030020:intron 30.0%
CTGGAAAGTTAAGTTTGAAA+GGG - chr1_1:55925089-55925108 Msa0030020:intron 30.0%
TCGACAACAATAAGCATTAA+AGG + chr1_1:55925115-55925134 None:intergenic 30.0%
!! ATTGCTTGCTATGATTGATT+AGG - chr1_1:55925286-55925305 Msa0030020:intron 30.0%
!! TTGCTTGCTATGATTGATTA+GGG - chr1_1:55925287-55925306 Msa0030020:intron 30.0%
TCAGAAAACTATGACCAATA+TGG - chr1_1:55925509-55925528 Msa0030020:intron 30.0%
! GAAAATGCTTTCTAATGGAT+TGG - chr1_1:55925608-55925627 Msa0030020:intron 30.0%
CCAATATACAAATTTCAGGA+TGG + chr1_1:55925656-55925675 None:intergenic 30.0%
CCATCCTGAAATTTGTATAT+TGG - chr1_1:55925653-55925672 Msa0030020:intron 30.0%
TGCACCAATATACAAATTTC+AGG + chr1_1:55925660-55925679 None:intergenic 30.0%
!!! TTTTTTTAGAGGATGTCAAG+GGG + chr1_1:55925827-55925846 None:intergenic 30.0%
ACTAGCTATTACATTCTTAC+AGG - chr1_1:55925914-55925933 Msa0030020:CDS 30.0%
TCAAACAACATACAGCTACA+AGG - chr1_1:55910134-55910153 Msa0030020:intron 35.0%
ATATCTCAATTTGGGCAACA+CGG + chr1_1:55910280-55910299 None:intergenic 35.0%
GAGATATTCTCTCACTATGT+TGG - chr1_1:55910293-55910312 Msa0030020:intron 35.0%
GTAAGTAGGAGGAGAAATAA+AGG + chr1_1:55910341-55910360 None:intergenic 35.0%
! TTCTGATTGAAAGTGTGTCT+TGG + chr1_1:55910453-55910472 None:intergenic 35.0%
! ACACTTTCAATCAGAAGTGT+CGG - chr1_1:55910457-55910476 Msa0030020:intron 35.0%
AGCTTTCCTTAAAATCAAGG+TGG - chr1_1:55910587-55910606 Msa0030020:intron 35.0%
TCTATATGTAAGTTTCCAGG+TGG - chr1_1:55910665-55910684 Msa0030020:intron 35.0%
GGGCTGATTAATTGTTTACA+TGG + chr1_1:55910762-55910781 None:intergenic 35.0%
TGGGGTAATGATTTCTAACA+GGG + chr1_1:55910782-55910801 None:intergenic 35.0%
TTGGGGTAATGATTTCTAAC+AGG + chr1_1:55910783-55910802 None:intergenic 35.0%
AAACATGAAACAAGGGATTG+GGG + chr1_1:55910800-55910819 None:intergenic 35.0%
GAAAACATGAAACAAGGGAT+TGG + chr1_1:55910802-55910821 None:intergenic 35.0%
CTACTATTGCTGAAAGCTTA+GGG + chr1_1:55911049-55911068 None:intergenic 35.0%
TCTACTATTGCTGAAAGCTT+AGG + chr1_1:55911050-55911069 None:intergenic 35.0%
! GTGATGAAAAGCCTTATGAT+CGG - chr1_1:55911270-55911289 Msa0030020:intron 35.0%
CTTGGATATGTTTGGATTGA+TGG + chr1_1:55911378-55911397 None:intergenic 35.0%
! AGACATGTGGTTTAAAGTCT+TGG + chr1_1:55911396-55911415 None:intergenic 35.0%
GATTGCCAATAAAAGACATG+TGG + chr1_1:55911409-55911428 None:intergenic 35.0%
! TTTAGTTTCTGCAGTGTATG+GGG + chr1_1:55911945-55911964 None:intergenic 35.0%
! CTTTAGTTTCTGCAGTGTAT+GGG + chr1_1:55911946-55911965 None:intergenic 35.0%
! ACTTTAGTTTCTGCAGTGTA+TGG + chr1_1:55911947-55911966 None:intergenic 35.0%
! GTGTTTGGAACTTGTTTATG+TGG + chr1_1:55912002-55912021 None:intergenic 35.0%
!! GGTTTTGATGGTTTTTTGGA+GGG + chr1_1:55912050-55912069 None:intergenic 35.0%
!! AAAGTGAGGTGTTGTTATAG+GGG + chr1_1:55912081-55912100 None:intergenic 35.0%
!! GAAAGTGAGGTGTTGTTATA+GGG + chr1_1:55912082-55912101 None:intergenic 35.0%
!! AGAAAGTGAGGTGTTGTTAT+AGG + chr1_1:55912083-55912102 None:intergenic 35.0%
!!! GTGTTTTTCGGGTGTTTATT+TGG + chr1_1:55912122-55912141 None:intergenic 35.0%
! TGTTGGGATAAGTGTTTTTC+GGG + chr1_1:55912133-55912152 None:intergenic 35.0%
GGTGGACCGTTAAAAATAAT+TGG + chr1_1:55912514-55912533 None:intergenic 35.0%
CACAATTAGTCGACTGTAAT+CGG + chr1_1:55912535-55912554 None:intergenic 35.0%
GAGAGTAGCAAAGAATCTAA+AGG - chr1_1:55912739-55912758 Msa0030020:CDS 35.0%
GTATTGAAGTGGTAGAGTTA+AGG + chr1_1:55912950-55912969 None:intergenic 35.0%
CAACTGATGGAATTGAACAA+TGG + chr1_1:55912977-55912996 None:intergenic 35.0%
TTCAGATCATTTGCAACTGA+TGG + chr1_1:55912990-55913009 None:intergenic 35.0%
AACGAGTTTCCTATAGACAT+TGG - chr1_1:55913146-55913165 Msa0030020:CDS 35.0%
!!! TCATAGTTTTTTTCGTTGGG+GGG + chr1_1:55913320-55913339 None:intergenic 35.0%
!!! ATGGTTTTGGCAGATCATTT+TGG - chr1_1:55913415-55913434 Msa0030020:intron 35.0%
!! CTAGTGACAGCTCTAAATAA+AGG - chr1_1:55913673-55913692 Msa0030020:CDS 35.0%
TACAAAAGGTTCCCATGATA+AGG + chr1_1:55913722-55913741 None:intergenic 35.0%
!! CAAATATAGGTATCGAATGG+GGG - chr1_1:55913774-55913793 Msa0030020:intron 35.0%
GGATATAGAGAAGCTAAAGA+TGG - chr1_1:55913799-55913818 Msa0030020:intron 35.0%
TTATTGGGAGCAAGTTAATG+AGG - chr1_1:55913837-55913856 Msa0030020:intron 35.0%
TGATTCTCACAATCTACAAG+TGG - chr1_1:55914335-55914354 Msa0030020:intron 35.0%
GATAAGCAGTTTAAATACCG+AGG - chr1_1:55914386-55914405 Msa0030020:intron 35.0%
TAATGAAACCAACACTGCTA+TGG - chr1_1:55914431-55914450 Msa0030020:intron 35.0%
AATGAAACCAACACTGCTAT+GGG - chr1_1:55914432-55914451 Msa0030020:intron 35.0%
ACATTGTTCTTTCTCCTTCA+AGG - chr1_1:55914475-55914494 Msa0030020:intron 35.0%
CAAGTGATGTGGAAAACTTA+AGG - chr1_1:55914499-55914518 Msa0030020:intron 35.0%
!! CTACAACGAAGTCATTTTCT+TGG - chr1_1:55914650-55914669 Msa0030020:intron 35.0%
AGCTGAAAATAAAGCTCCAA+TGG + chr1_1:55914751-55914770 None:intergenic 35.0%
!!! AGTGTAGTTTTGGAGTCATT+TGG - chr1_1:55914869-55914888 Msa0030020:intron 35.0%
CAGTCAATTGAGTCATTTGT+AGG - chr1_1:55914892-55914911 Msa0030020:intron 35.0%
! TGATTTCAGCAACAAGTTGA+AGG - chr1_1:55914926-55914945 Msa0030020:intron 35.0%
! CTGAGAAGACATTTTGAACT+TGG - chr1_1:55914962-55914981 Msa0030020:intron 35.0%
GATGTATTGTGTGATCTCTT+TGG - chr1_1:55915005-55915024 Msa0030020:intron 35.0%
AGATAGATGATACAAGCTGT+TGG - chr1_1:55915080-55915099 Msa0030020:intron 35.0%
CTTGATATTGTGGAACAACT+TGG + chr1_1:55915190-55915209 None:intergenic 35.0%
CAAGTTGTTCCACAATATCA+AGG - chr1_1:55915188-55915207 Msa0030020:intron 35.0%
AAACGAGATCCTTGATATTG+TGG + chr1_1:55915200-55915219 None:intergenic 35.0%
! AAGCTTCAATCTTGTTTCCA+CGG + chr1_1:55915322-55915341 None:intergenic 35.0%
ATGTTCAATCAAACCTTCGA+TGG - chr1_1:55915632-55915651 Msa0030020:intron 35.0%
! AGGGTGTTCTGATCAAATAA+TGG - chr1_1:55915680-55915699 Msa0030020:intron 35.0%
TGTACAAAGAGATGAGAATG+AGG - chr1_1:55915743-55915762 Msa0030020:intron 35.0%
ATTGCCAACCTTTGTGAATT+TGG - chr1_1:55915976-55915995 Msa0030020:CDS 35.0%
TGATCCAAATTCACAAAGGT+TGG + chr1_1:55915983-55916002 None:intergenic 35.0%
AAACTTTGATCCATGGAACA+AGG - chr1_1:55916017-55916036 Msa0030020:CDS 35.0%
AACTTTGATCCATGGAACAA+GGG - chr1_1:55916018-55916037 Msa0030020:CDS 35.0%
AAAGAGTAATAGAGAAGAGG+AGG - chr1_1:55916124-55916143 Msa0030020:intron 35.0%
GTAGAAAGATGTGAATCTTG+GGG + chr1_1:55916179-55916198 None:intergenic 35.0%
GCTCAGATTGAAGAGAAAAA+AGG + chr1_1:55916248-55916267 None:intergenic 35.0%
TCTCTTCAATCTGAGCAATT+TGG - chr1_1:55916252-55916271 Msa0030020:intron 35.0%
CTCTTCAATCTGAGCAATTT+GGG - chr1_1:55916253-55916272 Msa0030020:intron 35.0%
ATTTCACCATATACAGCTGT+TGG - chr1_1:55916507-55916526 Msa0030020:intron 35.0%
TCTTTGATGCTGTCTGAATT+TGG + chr1_1:55917100-55917119 None:intergenic 35.0%
AAATCACTTGACATGTCTTG+AGG - chr1_1:55917261-55917280 Msa0030020:intron 35.0%
! TGTAGGCTTAATAGCACTTT+TGG - chr1_1:55917301-55917320 Msa0030020:intron 35.0%
! GCAATTTTGTCAAACATAGG+GGG + chr1_1:55919291-55919310 None:intergenic 35.0%
! CGCAATTTTGTCAAACATAG+GGG + chr1_1:55919290-55919309 None:intergenic 35.0%
CAACGAAAACGAAACATAAG+GGG + chr1_1:55919232-55919251 None:intergenic 35.0%
GCAACGAAAACGAAACATAA+GGG + chr1_1:55919231-55919250 None:intergenic 35.0%
TGCAACGAAAACGAAACATA+AGG + chr1_1:55919230-55919249 None:intergenic 35.0%
! TTTCGTTTTCGTTGCACTTT+TGG - chr1_1:55917392-55917411 Msa0030020:intron 35.0%
ACCCACATCACTTATATGAA+GGG - chr1_1:55917455-55917474 Msa0030020:intron 35.0%
! GTTTGCAAAAGTTGCGATTT+TGG + chr1_1:55919137-55919156 None:intergenic 35.0%
! ATCGCAACTTTTGCAAACAT+AGG - chr1_1:55917483-55917502 Msa0030020:intron 35.0%
! TCGCAACTTTTGCAAACATA+GGG - chr1_1:55917484-55917503 Msa0030020:intron 35.0%
CTGAGAAGCTTGAATTACAT+AGG + chr1_1:55918270-55918289 None:intergenic 35.0%
AATCTGATTTAGATGGGATC+AGG - chr1_1:55918761-55918780 Msa0030020:intron 35.0%
ATCTGATTTAGATGGGATCA+GGG - chr1_1:55918762-55918781 Msa0030020:intron 35.0%
! TCGCAACTTTTGCAAACATA+GGG + chr1_1:55917484-55917503 None:intergenic 35.0%
! ATCGCAACTTTTGCAAACAT+AGG + chr1_1:55917483-55917502 None:intergenic 35.0%
! GTTTGCAAAAGTTGCGATTT+TGG - chr1_1:55919137-55919156 Msa0030020:intron 35.0%
! TTTCGTTTTCGTTGCACTTT+TGG + chr1_1:55917392-55917411 None:intergenic 35.0%
TGCAACGAAAACGAAACATA+AGG - chr1_1:55919230-55919249 Msa0030020:intron 35.0%
GCAACGAAAACGAAACATAA+GGG - chr1_1:55919231-55919250 Msa0030020:intron 35.0%
CAACGAAAACGAAACATAAG+GGG - chr1_1:55919232-55919251 Msa0030020:intron 35.0%
! CGCAATTTTGTCAAACATAG+GGG - chr1_1:55919290-55919309 Msa0030020:intron 35.0%
! GCAATTTTGTCAAACATAGG+GGG - chr1_1:55919291-55919310 Msa0030020:intron 35.0%
TTTATGATGTACGTATGACG+GGG + chr1_1:55919489-55919508 None:intergenic 35.0%
TATGTAGAAAGCTGGCTATA+CGG - chr1_1:55919584-55919603 Msa0030020:intron 35.0%
TCAAGGCATAGTTCTTACTT+TGG - chr1_1:55919710-55919729 Msa0030020:intron 35.0%
AGTTGTTATGCCAAAATGCT+AGG - chr1_1:55920234-55920253 Msa0030020:intron 35.0%
! GCATAAGTTACCTAGCATTT+TGG + chr1_1:55920247-55920266 None:intergenic 35.0%
!! TATCGGGTCAAATTTTAACC+CGG - chr1_1:55920472-55920491 Msa0030020:intron 35.0%
!! ACCGACTTTTGTTCATAACT+GGG - chr1_1:55920534-55920553 Msa0030020:intron 35.0%
ACCCAGTTATGAACAAAAGT+CGG + chr1_1:55920538-55920557 None:intergenic 35.0%
! TGATTGGTTAATTGTGCTTC+GGG + chr1_1:55920918-55920937 None:intergenic 35.0%
TGTGTTAAAATACACCTTCG+TGG - chr1_1:55921076-55921095 Msa0030020:intron 35.0%
GTGTTAAAATACACCTTCGT+GGG - chr1_1:55921077-55921096 Msa0030020:intron 35.0%
TGATATAGCATTCCTCTTGA+AGG - chr1_1:55921124-55921143 Msa0030020:intron 35.0%
!! GGGTCAATATTTTTGAAGGA+TGG + chr1_1:55921180-55921199 None:intergenic 35.0%
!! CTAGGGGTCAATATTTTTGA+AGG + chr1_1:55921184-55921203 None:intergenic 35.0%
TTATGTCAGCAAGACTACTA+GGG + chr1_1:55921201-55921220 None:intergenic 35.0%
ATTATGTCAGCAAGACTACT+AGG + chr1_1:55921202-55921221 None:intergenic 35.0%
TGAGCTATCATTGGAAAGTT+TGG - chr1_1:55921244-55921263 Msa0030020:intron 35.0%
AATACTCTTAACCCAGTTTC+TGG + chr1_1:55921292-55921311 None:intergenic 35.0%
! TATTTCACGTCTTTGTTGTG+GGG - chr1_1:55921376-55921395 Msa0030020:intron 35.0%
ACTAGATTTAACGATTCCCA+TGG - chr1_1:55921431-55921450 Msa0030020:intron 35.0%
GTCTTTAGTGTTTGACATGT+CGG + chr1_1:55921557-55921576 None:intergenic 35.0%
TTATTATATCCAAGCCGTCA+CGG - chr1_1:55921588-55921607 Msa0030020:CDS 35.0%
ACTTTCGCTTGTATTTGTGT+TGG - chr1_1:55921766-55921785 Msa0030020:intron 35.0%
CAAGATATGCATAGATGCTT+TGG + chr1_1:55921883-55921902 None:intergenic 35.0%
TGCATATCTTGCCAATGAAA+AGG - chr1_1:55921892-55921911 Msa0030020:CDS 35.0%
! AGATTCAGAGTCCTTTTCAT+TGG + chr1_1:55921906-55921925 None:intergenic 35.0%
AGCTCCATATATCATTAGTC+AGG - chr1_1:55921994-55922013 Msa0030020:intron 35.0%
GAGAGTAACCAAGAATTTGA+AGG - chr1_1:55922364-55922383 Msa0030020:intron 35.0%
TCTTGTCACCTTCAAATTCT+TGG + chr1_1:55922375-55922394 None:intergenic 35.0%
GAAAACAATCAATGTCGGTA+AGG - chr1_1:55922421-55922440 Msa0030020:intron 35.0%
TTCAAGTCTGTGCCATAAAT+AGG - chr1_1:55922709-55922728 Msa0030020:intron 35.0%
ACATCGGCAAAGTACAAATT+AGG + chr1_1:55922793-55922812 None:intergenic 35.0%
TATAAAGCCCTTCACAATAG+GGG - chr1_1:55922923-55922942 Msa0030020:intron 35.0%
ATAATGACCCCTATTGTGAA+GGG + chr1_1:55922933-55922952 None:intergenic 35.0%
GAAAAAAGGTTCCCATGATA+AGG + chr1_1:55923141-55923160 None:intergenic 35.0%
TTCATTAACTGTACCATCCT+CGG + chr1_1:55923234-55923253 None:intergenic 35.0%
CCAACTAGCTCAATTCTATA+AGG + chr1_1:55923305-55923324 None:intergenic 35.0%
CCTTATAGAATTGAGCTAGT+TGG - chr1_1:55923302-55923321 Msa0030020:CDS 35.0%
GGTTATCATGCAGTTATTAG+AGG - chr1_1:55923338-55923357 Msa0030020:intron 35.0%
!! ATGCAGTTATTAGAGGCATT+AGG - chr1_1:55923345-55923364 Msa0030020:intron 35.0%
AACTATATCATACGCAAGAG+AGG + chr1_1:55923640-55923659 None:intergenic 35.0%
TCAACGAGTTTGCAATATCT+TGG + chr1_1:55923772-55923791 None:intergenic 35.0%
CTTTATTGCACAAACGATGT+TGG - chr1_1:55923802-55923821 Msa0030020:intron 35.0%
TTATTGCACAAACGATGTTG+GGG - chr1_1:55923804-55923823 Msa0030020:intron 35.0%
TGTTCATGTTTACCTTTGGT+GGG + chr1_1:55923831-55923850 None:intergenic 35.0%
ATGTTCATGTTTACCTTTGG+TGG + chr1_1:55923832-55923851 None:intergenic 35.0%
ATACAAAACAGCTTATTGGG+TGG - chr1_1:55923922-55923941 Msa0030020:intron 35.0%
TTCCATCTATGAACTTCACA+AGG - chr1_1:55924028-55924047 Msa0030020:intron 35.0%
TTCCTTGTGAAGTTCATAGA+TGG + chr1_1:55924033-55924052 None:intergenic 35.0%
!!! ACTTTGTTTTGTCACCTTCA+AGG - chr1_1:55924090-55924109 Msa0030020:intron 35.0%
CAAGTGTTCAGAAAGAGTTA+AGG - chr1_1:55924114-55924133 Msa0030020:intron 35.0%
! AGGACAGAAAAGGCTTTTAA+TGG - chr1_1:55924263-55924282 Msa0030020:CDS 35.0%
AGACTTAAGATGCAAGTCAT+GGG + chr1_1:55924451-55924470 None:intergenic 35.0%
! ATGACTTGCATCTTAAGTCT+GGG - chr1_1:55924451-55924470 Msa0030020:intron 35.0%
! TATCATTTTGCATTTCCTCG+TGG - chr1_1:55924505-55924524 Msa0030020:intron 35.0%
! GACAAAAGCATGAAACAACA+AGG + chr1_1:55924550-55924569 None:intergenic 35.0%
!! ATGCAACGATTGCTTTTCTT+AGG - chr1_1:55924584-55924603 Msa0030020:intron 35.0%
!! GAAGTTGATGGTATGTTGAT+CGG - chr1_1:55925140-55925159 Msa0030020:intron 35.0%
TTGCTATGATTGATTAGGGT+TGG - chr1_1:55925291-55925310 Msa0030020:intron 35.0%
GATAAGACTTGACCTAAACT+AGG + chr1_1:55925378-55925397 None:intergenic 35.0%
TATAACTTCACACCTCTACA+TGG + chr1_1:55925547-55925566 None:intergenic 35.0%
CAAATTTCAGGATGGTGTAA+TGG + chr1_1:55925648-55925667 None:intergenic 35.0%
GTATATTGGTGCAAACGAAA+AGG - chr1_1:55925667-55925686 Msa0030020:intron 35.0%
TAACATACGGTTGAGGAATT+TGG + chr1_1:55925799-55925818 None:intergenic 35.0%
!! TCAAGGGGTTTGTTAACATA+CGG + chr1_1:55925812-55925831 None:intergenic 35.0%
! TCGATTGAGCAAGAACTTTT+TGG - chr1_1:55925878-55925897 Msa0030020:CDS 35.0%
!!! GCAAGAACTTTTTGGTTGTT+TGG - chr1_1:55925886-55925905 Msa0030020:CDS 35.0%
! ATACAGCTACAAGGTACTAC+TGG - chr1_1:55910143-55910162 Msa0030020:intron 40.0%
ATGTAAGTGGGGAATGATCT+TGG + chr1_1:55910243-55910262 None:intergenic 40.0%
GATGTGGTTTGATGTAAGTG+GGG + chr1_1:55910254-55910273 None:intergenic 40.0%
GGATGTGGTTTGATGTAAGT+GGG + chr1_1:55910255-55910274 None:intergenic 40.0%
CACTTACATCAAACCACATC+CGG - chr1_1:55910254-55910273 Msa0030020:intron 40.0%
TCGTGTGTAAAGTAAGTAGG+AGG + chr1_1:55910352-55910371 None:intergenic 40.0%
GTGTCGTGTGTAAAGTAAGT+AGG + chr1_1:55910355-55910374 None:intergenic 40.0%
TTCATCGTAACCACAAGTGT+CGG - chr1_1:55910402-55910421 Msa0030020:intron 40.0%
! TACAGTGTCACTGTAGTTCA+TGG - chr1_1:55910550-55910569 Msa0030020:intron 40.0%
! GGAAGATTTCAGGTAACTAC+AGG + chr1_1:55910640-55910659 None:intergenic 40.0%
!!! TTTTTTTTGGTAAGGCGGAG+TGG + chr1_1:55910697-55910716 None:intergenic 40.0%
ACATTTGAGCCAAGTCCAAA+GGG + chr1_1:55910966-55910985 None:intergenic 40.0%
AACATTTGAGCCAAGTCCAA+AGG + chr1_1:55910967-55910986 None:intergenic 40.0%
GACTTGGCTCAAATGTTTGT+TGG - chr1_1:55910970-55910989 Msa0030020:intron 40.0%
ACTTGTCTATTATCACCCAC+CGG + chr1_1:55911013-55911032 None:intergenic 40.0%
AAACAAATGGACAGTAGCCA+TGG + chr1_1:55911575-55911594 None:intergenic 40.0%
!!! GTCCATTTGTTTTTGCAGCT+AGG - chr1_1:55911583-55911602 Msa0030020:intron 40.0%
TGCCTAGCTGCAAAAACAAA+TGG + chr1_1:55911588-55911607 None:intergenic 40.0%
! GTTTTTGCAGCTAGGCAAAT+AGG - chr1_1:55911591-55911610 Msa0030020:intron 40.0%
!! AGGATTTGTTGATGCTAGTG+AGG - chr1_1:55911611-55911630 Msa0030020:intron 40.0%
TTAGTTTCTGCAGTGTATGG+GGG + chr1_1:55911944-55911963 None:intergenic 40.0%
CAAAACCTCAAACTGTATCG+TGG - chr1_1:55911972-55911991 Msa0030020:CDS 40.0%
!!! GATGGTTTTTTGGAGGGTTT+TGG + chr1_1:55912044-55912063 None:intergenic 40.0%
!! CGGTTTTGATGGTTTTTTGG+AGG + chr1_1:55912051-55912070 None:intergenic 40.0%
!! GGTCGGTTTTGATGGTTTTT+TGG + chr1_1:55912054-55912073 None:intergenic 40.0%
!! GTTGTTATAGGGGTTTTGGT+CGG + chr1_1:55912071-55912090 None:intergenic 40.0%
!!! AGGTGTTGTTATAGGGGTTT+TGG + chr1_1:55912075-55912094 None:intergenic 40.0%
!! ACTTTATCAGGGCCTTGTTA+TGG + chr1_1:55912205-55912224 None:intergenic 40.0%
! ATGTATTTTCGGTTGGGACT+CGG + chr1_1:55912375-55912394 None:intergenic 40.0%
! ATATTCTTTTGGCAGCCACA+AGG - chr1_1:55912402-55912421 Msa0030020:intron 40.0%
AATTAGTCGACTGTAATCGG+TGG + chr1_1:55912532-55912551 None:intergenic 40.0%
!!! CATAGTTTTTTTCGTTGGGG+GGG + chr1_1:55913319-55913338 None:intergenic 40.0%
TAAAGGACGAGATGTGATCA+TGG - chr1_1:55913690-55913709 Msa0030020:intron 40.0%
TCATGGATGGTACCTTATCA+TGG - chr1_1:55913707-55913726 Msa0030020:intron 40.0%
CATGGATGGTACCTTATCAT+GGG - chr1_1:55913708-55913727 Msa0030020:intron 40.0%
! CTTTGATTCGTGCTCTTCTT+CGG + chr1_1:55913863-55913882 None:intergenic 40.0%
CCAACTAGCACAATTCTGTA+GGG + chr1_1:55913919-55913938 None:intergenic 40.0%
ACCAACTAGCACAATTCTGT+AGG + chr1_1:55913920-55913939 None:intergenic 40.0%
!! TTGCTGTTGTTAGAGGCATT+AGG - chr1_1:55913959-55913978 Msa0030020:intron 40.0%
GAGAGCTATCATGACAAGAA+GGG - chr1_1:55914071-55914090 Msa0030020:CDS 40.0%
! AAACTGTTTGCTACCTTTGG+TGG + chr1_1:55914210-55914229 None:intergenic 40.0%
! GCAAAACTGTTTGCTACCTT+TGG + chr1_1:55914213-55914232 None:intergenic 40.0%
ACCTGAAGTTCTCAAATGCT+TGG - chr1_1:55914359-55914378 Msa0030020:intron 40.0%
TCCAAGCATTTGAGAACTTC+AGG + chr1_1:55914363-55914382 None:intergenic 40.0%
TCTATGGTTTAACATCAGCG+TGG - chr1_1:55914615-55914634 Msa0030020:intron 40.0%
CTATGGTTTAACATCAGCGT+GGG - chr1_1:55914616-55914635 Msa0030020:intron 40.0%
TATTTCCCTGTACATGTCAC+AGG + chr1_1:55914801-55914820 None:intergenic 40.0%
TAGATGATACAAGCTGTTGG+AGG - chr1_1:55915083-55915102 Msa0030020:intron 40.0%
CAGGAAGATGAAGAAAGAAG+AGG - chr1_1:55915139-55915158 Msa0030020:intron 40.0%
AACTCACCTAAGTCGACATT+AGG - chr1_1:55915660-55915679 Msa0030020:intron 40.0%
ACTCACCTAAGTCGACATTA+GGG - chr1_1:55915661-55915680 Msa0030020:intron 40.0%
! GGCATTCTTACACTTTTGGA+AGG + chr1_1:55915852-55915871 None:intergenic 40.0%
!! TTGGGGCATTCTTACACTTT+TGG + chr1_1:55915856-55915875 None:intergenic 40.0%
AGTGTAAGAATGCCCCAATT+TGG - chr1_1:55915858-55915877 Msa0030020:intron 40.0%
CAAAGTGGAATTGTTGGTGT+TGG + chr1_1:55916304-55916323 None:intergenic 40.0%
ACCAGGTCAAAATTGACCAT+GGG + chr1_1:55919198-55919217 None:intergenic 40.0%
CACCCACATCACTTATATGA+AGG - chr1_1:55917454-55917473 Msa0030020:intron 40.0%
GCCCTTCATATAAGTGATGT+GGG + chr1_1:55917459-55917478 None:intergenic 40.0%
! CGCAACTTTTGCAAACATAG+GGG - chr1_1:55917485-55917504 Msa0030020:intron 40.0%
! GCAACTTTTGCAAACATAGG+GGG - chr1_1:55917486-55917505 Msa0030020:intron 40.0%
TCTGATTTAGATGGGATCAG+GGG - chr1_1:55918763-55918782 Msa0030020:intron 40.0%
!!! TTTTTTACAGGGGGGAAAAC+CGG - chr1_1:55918833-55918852 Msa0030020:intron 40.0%
CCTGTAATTTAGGCAAGTTC+CGG + chr1_1:55918855-55918874 None:intergenic 40.0%
CGGAACTTGCCTAAATTACA+GGG - chr1_1:55918853-55918872 Msa0030020:intron 40.0%
GGAACTTGCCTAAATTACAG+GGG - chr1_1:55918854-55918873 Msa0030020:intron 40.0%
GAACTTGCCTAAATTACAGG+GGG - chr1_1:55918855-55918874 Msa0030020:intron 40.0%
GTCTTTACCCCCTGTAATTT+AGG + chr1_1:55918865-55918884 None:intergenic 40.0%
! GCAACTTTTGCAAACATAGG+GGG + chr1_1:55917486-55917505 None:intergenic 40.0%
! CGCAACTTTTGCAAACATAG+GGG + chr1_1:55917485-55917504 None:intergenic 40.0%
ACCCACATCACTTATATGAG+GGG + chr1_1:55919163-55919182 None:intergenic 40.0%
CACCCACATCACTTATATGA+GGG + chr1_1:55917454-55917473 None:intergenic 40.0%
ACCAGGTCAAAATTGACCAT+TGG - chr1_1:55919198-55919217 Msa0030020:intron 40.0%
CCAGGTCAAAATTGACCATT+GGG - chr1_1:55919199-55919218 Msa0030020:intron 40.0%
CAGGTCAAAATTGACCATTG+GGG - chr1_1:55919200-55919219 Msa0030020:intron 40.0%
TACCTTGCTCCATATCTTGT+TGG + chr1_1:55919775-55919794 None:intergenic 40.0%
ATATTTACTTTCTGCACCGG+TGG + chr1_1:55920331-55920350 None:intergenic 40.0%
!!! CACCGACTTTTGTTCATAAC+TGG - chr1_1:55920533-55920552 Msa0030020:intron 40.0%
AATAGCTCGCAAATGATTCG+TGG - chr1_1:55921013-55921032 Msa0030020:intron 40.0%
TATGTCAGCAAGACTACTAG+GGG + chr1_1:55921200-55921219 None:intergenic 40.0%
! TCTTAACCCAGTTTCTGGAA+TGG + chr1_1:55921287-55921306 None:intergenic 40.0%
TAGCTGTTACACAATGCAGT+TGG - chr1_1:55921458-55921477 Msa0030020:intron 40.0%
! TTGTATTTGTGTTGGCAGCT+AGG - chr1_1:55921774-55921793 Msa0030020:intron 40.0%
AGGATTTGAAGATGCAAGTG+AGG - chr1_1:55921802-55921821 Msa0030020:intron 40.0%
GGGCAAGTTTGCATAACTTT+GGG + chr1_1:55921829-55921848 None:intergenic 40.0%
TGGGCAAGTTTGCATAACTT+TGG + chr1_1:55921830-55921849 None:intergenic 40.0%
ATTGAGTACATCTCTGTCGT+TGG - chr1_1:55922077-55922096 Msa0030020:CDS 40.0%
!! GACAAGAGTGTTCTCTACTT+TGG - chr1_1:55912763-55912782 Msa0030020:CDS 40.0%
ATGCGAGAGTAGAATTAGGA+TGG + chr1_1:55922564-55922583 None:intergenic 40.0%
CACAATGCGAGAGTAGAATT+AGG + chr1_1:55922568-55922587 None:intergenic 40.0%
!!! ATGGCTTTGGCAGATCATTT+TGG - chr1_1:55922837-55922856 Msa0030020:intron 40.0%
!! TTTGGCAGATCATTTTGGTC+AGG - chr1_1:55913420-55913439 Msa0030020:intron 40.0%
TTCAAAACCAGTGGTTGTTG+AGG - chr1_1:55922871-55922890 Msa0030020:intron 40.0%
! TGTTGAGGCAGATGCTTTTA+AGG - chr1_1:55922886-55922905 Msa0030020:intron 40.0%
CATAATGACCCCTATTGTGA+AGG + chr1_1:55922934-55922953 None:intergenic 40.0%
TGCATCATCTGTACTTGTGA+CGG - chr1_1:55923079-55923098 Msa0030020:intron 40.0%
!! TTGTGACGGCTCTAAACAAA+GGG - chr1_1:55923093-55923112 Msa0030020:intron 40.0%
TCATGGACAGTACCTTATCA+TGG - chr1_1:55923126-55923145 Msa0030020:CDS 40.0%
CATGGACAGTACCTTATCAT+GGG - chr1_1:55923127-55923146 Msa0030020:CDS 40.0%
GCAATAGTCTGCTCGAAAAA+AGG + chr1_1:55923155-55923174 None:intergenic 40.0%
TTTCGAGCAGACTATTGCTA+TGG - chr1_1:55923157-55923176 Msa0030020:CDS 40.0%
TCATACGCAAGAGAGGAAAT+AGG + chr1_1:55923633-55923652 None:intergenic 40.0%
ACAGGAGAGCTATTATGACA+AGG - chr1_1:55923689-55923708 Msa0030020:intron 40.0%
GAGAGCTATTATGACAAGGA+GGG - chr1_1:55923693-55923712 Msa0030020:intron 40.0%
ATCGTTTGTGCAATAAAGCC+TGG + chr1_1:55923800-55923819 None:intergenic 40.0%
AAAACAGCTTATTGGGTGGA+AGG - chr1_1:55923926-55923945 Msa0030020:intron 40.0%
!! TAATGGAACCTGGTTCTGTT+TGG - chr1_1:55924063-55924082 Msa0030020:intron 40.0%
AAGTCATTCCAAACAGAACC+AGG + chr1_1:55924074-55924093 None:intergenic 40.0%
TTCTGAACACTTGACCTTGA+AGG + chr1_1:55924107-55924126 None:intergenic 40.0%
AAACATAAGGCAAAGAGGGA+TGG + chr1_1:55924346-55924365 None:intergenic 40.0%
GTGGAAACATAAGGCAAAGA+GGG + chr1_1:55924350-55924369 None:intergenic 40.0%
AGTGGAAACATAAGGCAAAG+AGG + chr1_1:55924351-55924370 None:intergenic 40.0%
! AGGTCTGAAGTGGAAACATA+AGG + chr1_1:55924359-55924378 None:intergenic 40.0%
TTTCCACTTCAGACCTTTGT+TGG - chr1_1:55924363-55924382 Msa0030020:CDS 40.0%
TTCCACTTCAGACCTTTGTT+GGG - chr1_1:55924364-55924383 Msa0030020:CDS 40.0%
ACTTAAGATGCAAGTCATGG+GGG + chr1_1:55924449-55924468 None:intergenic 40.0%
GACTTAAGATGCAAGTCATG+GGG + chr1_1:55924450-55924469 None:intergenic 40.0%
CAGACTTAAGATGCAAGTCA+TGG + chr1_1:55924452-55924471 None:intergenic 40.0%
! CATGACTTGCATCTTAAGTC+TGG - chr1_1:55924450-55924469 Msa0030020:intron 40.0%
CTTAGGCAAACCTAGATTGT+TGG - chr1_1:55924601-55924620 Msa0030020:intron 40.0%
GTCAGCAATCCTTTCTTTGA+TGG - chr1_1:55924753-55924772 Msa0030020:intron 40.0%
ACTACCAACTACCCAGAATT+TGG + chr1_1:55924819-55924838 None:intergenic 40.0%
!!! TGGGTAGTTGGTAGTTTTCT+AGG - chr1_1:55924824-55924843 Msa0030020:intron 40.0%
!!! GGGTAGTTGGTAGTTTTCTA+GGG - chr1_1:55924825-55924844 Msa0030020:intron 40.0%
!! GGTAGTTTTCTAGGGATTTG+TGG - chr1_1:55924833-55924852 Msa0030020:intron 40.0%
!! GTTTTCTAGGGATTTGTGGT+TGG - chr1_1:55924837-55924856 Msa0030020:intron 40.0%
ATGCTTATTGTTGTCGAGAC+AGG - chr1_1:55925118-55925137 Msa0030020:intron 40.0%
ATGTTGATCGGATTCCTTGT+TGG - chr1_1:55925152-55925171 Msa0030020:intron 40.0%
! GTCACTTTGTAACCCTTGTT+TGG - chr1_1:55925332-55925351 Msa0030020:intron 40.0%
! CTTTGTAACCCTTGTTTGGT+CGG - chr1_1:55925336-55925355 Msa0030020:intron 40.0%
! TTTGTAACCCTTGTTTGGTC+GGG - chr1_1:55925337-55925356 Msa0030020:intron 40.0%
ACTAGTGGTCTTCCTAGTTT+AGG - chr1_1:55925363-55925382 Msa0030020:intron 40.0%
!! GGTTTGTTAACATACGGTTG+AGG + chr1_1:55925806-55925825 None:intergenic 40.0%
! CAAGGTACTACTGGTAGTGT+TGG - chr1_1:55910152-55910171 Msa0030020:intron 45.0%
!! TACCACCATTGATTCGACGA+TGG + chr1_1:55910216-55910235 None:intergenic 45.0%
CGGATGTGGTTTGATGTAAG+TGG + chr1_1:55910256-55910275 None:intergenic 45.0%
! GGTGTGCCACCTTGATTTTA+AGG + chr1_1:55910596-55910615 None:intergenic 45.0%
! CTCGAGCAACTTGTTCACTT+AGG + chr1_1:55910919-55910938 None:intergenic 45.0%
AAGTGAACAAGTTGCTCGAG+TGG - chr1_1:55910919-55910938 Msa0030020:intron 45.0%
AGTGAACAAGTTGCTCGAGT+GGG - chr1_1:55910920-55910939 Msa0030020:intron 45.0%
! TGTTTGTTGGTCTGCGATTC+CGG - chr1_1:55910983-55911002 Msa0030020:intron 45.0%
TCAACCAATTGTGCCTACGT+AGG + chr1_1:55911112-55911131 None:intergenic 45.0%
GGTTCCAGAGTTATGCAGAT+TGG - chr1_1:55911632-55911651 Msa0030020:intron 45.0%
TGTGCCAATCTGCATAACTC+TGG + chr1_1:55911639-55911658 None:intergenic 45.0%
AGAGTTATGCAGATTGGCAC+AGG - chr1_1:55911638-55911657 Msa0030020:intron 45.0%
TCAATATCTAGCCAACGGAG+AGG - chr1_1:55911701-55911720 Msa0030020:intron 45.0%
GTCATCCACGATACAGTTTG+AGG + chr1_1:55911980-55911999 None:intergenic 45.0%
AGTTGCATGCGATAGGTGTT+TGG + chr1_1:55912017-55912036 None:intergenic 45.0%
TGTTATGGTGTCTTCTCCAG+CGG + chr1_1:55912190-55912209 None:intergenic 45.0%
CTGGAGAAGACACCATAACA+AGG - chr1_1:55912190-55912209 Msa0030020:intron 45.0%
CTCTCAAAGTTGTGACGTCA+AGG - chr1_1:55912814-55912833 Msa0030020:intron 45.0%
! AGTCCAGTGTTGCTGCTTAT+GGG - chr1_1:55912863-55912882 Msa0030020:CDS 45.0%
! GTCTGAAGCTTCAAATGCTG+TGG - chr1_1:55913437-55913456 Msa0030020:intron 45.0%
CGTTGAAGCTGATGCGTTTA+AGG - chr1_1:55913461-55913480 Msa0030020:intron 45.0%
CATGCTCGAAACTGCTGAAT+TGG - chr1_1:55913533-55913552 Msa0030020:CDS 45.0%
GCTATCGTCTGCTCTACAAA+AGG + chr1_1:55913736-55913755 None:intergenic 45.0%
! CGAAGAAGAGCACGAATCAA+AGG - chr1_1:55913861-55913880 Msa0030020:intron 45.0%
CCCTACAGAATTGTGCTAGT+TGG - chr1_1:55913916-55913935 Msa0030020:CDS 45.0%
! CAGAATTGTGCTAGTTGGTG+TGG - chr1_1:55913921-55913940 Msa0030020:intron 45.0%
! CTAGTTGGTGTGGTTTGTGA+TGG - chr1_1:55913931-55913950 Msa0030020:intron 45.0%
!! GGCTATCTTGCTGTTGTTAG+AGG - chr1_1:55913952-55913971 Msa0030020:intron 45.0%
GGAGAGCTATCATGACAAGA+AGG - chr1_1:55914070-55914089 Msa0030020:CDS 45.0%
!! GCAAACTTGTTGACAGTGCA+AGG - chr1_1:55914157-55914176 Msa0030020:CDS 45.0%
TATTACACGACTGATGTCCG+TGG - chr1_1:55914183-55914202 Msa0030020:CDS 45.0%
TTCGTAGATGGAATCTGCCT+CGG + chr1_1:55914406-55914425 None:intergenic 45.0%
ATGTCATTCCAAACAGTGCC+AGG + chr1_1:55914459-55914478 None:intergenic 45.0%
TCCTTCAAGGTCAAGTGATG+TGG - chr1_1:55914488-55914507 Msa0030020:intron 45.0%
TCCACATCACTTGACCTTGA+AGG + chr1_1:55914492-55914511 None:intergenic 45.0%
TAACATCAGCGTGGGAAACA+AGG - chr1_1:55914624-55914643 Msa0030020:intron 45.0%
TGTTGACCTGTGACATGTAC+AGG - chr1_1:55914792-55914811 Msa0030020:intron 45.0%
GTTGACCTGTGACATGTACA+GGG - chr1_1:55914793-55914812 Msa0030020:intron 45.0%
AGTGCAGAAAACCAACACCT+AGG + chr1_1:55915252-55915271 None:intergenic 45.0%
! TTTTCTGCACTGAGAAGCTG+AGG - chr1_1:55915261-55915280 Msa0030020:intron 45.0%
TCCAAACTGAAGATTCACCG+TGG - chr1_1:55915302-55915321 Msa0030020:intron 45.0%
TCCACGGTGAATCTTCAGTT+TGG + chr1_1:55915306-55915325 None:intergenic 45.0%
!! GAACACCCTAATGTCGACTT+AGG + chr1_1:55915669-55915688 None:intergenic 45.0%
AGCATTAATGCAGCAGAGGA+AGG + chr1_1:55915828-55915847 None:intergenic 45.0%
!! AGGAAGCATTAATGCAGCAG+AGG + chr1_1:55915832-55915851 None:intergenic 45.0%
GGTGTTCGCTTAGAGAATTG+AGG - chr1_1:55915935-55915954 Msa0030020:intron 45.0%
GGAACTCCAACAGCTGTATA+TGG + chr1_1:55916516-55916535 None:intergenic 45.0%
GACGTCGTCTTTGATAGACA+TGG - chr1_1:55916587-55916606 Msa0030020:intron 45.0%
AATGTTTCGTGGCTCGTCAA+TGG - chr1_1:55916743-55916762 Msa0030020:intron 45.0%
GGTTGCAAACCGATACTATG+TGG + chr1_1:55917079-55917098 None:intergenic 45.0%
CGAAAACGAAACATAAGGGG+CGG + chr1_1:55919235-55919254 None:intergenic 45.0%
CAGGTCAAAATTGACCATGG+GGG + chr1_1:55917418-55917437 None:intergenic 45.0%
CCAGGTCAAAATTGACCATG+GGG + chr1_1:55917419-55917438 None:intergenic 45.0%
GACCAGGTCAAAATTGACCA+TGG + chr1_1:55919197-55919216 None:intergenic 45.0%
GGCCCTTCATATAAGTGATG+TGG + chr1_1:55917460-55917479 None:intergenic 45.0%
CAAACATAGGGGGCCAAAAA+TGG - chr1_1:55917496-55917515 Msa0030020:intron 45.0%
GAGATTGGAAGAGCAACTTG+AGG - chr1_1:55918158-55918177 Msa0030020:intron 45.0%
CTGATTTAGATGGGATCAGG+GGG - chr1_1:55918764-55918783 Msa0030020:intron 45.0%
TGATTTAGATGGGATCAGGG+GGG - chr1_1:55918765-55918784 Msa0030020:intron 45.0%
CCGGAACTTGCCTAAATTAC+AGG - chr1_1:55918852-55918871 Msa0030020:intron 45.0%
GCCCCTCATATAAGTGATGT+GGG - chr1_1:55919159-55919178 Msa0030020:intron 45.0%
GCACCCACATCACTTATATG+AGG + chr1_1:55917453-55917472 None:intergenic 45.0%
!! CCCAATGGTCAATTTTGACC+TGG + chr1_1:55919202-55919221 None:intergenic 45.0%
CGAAAACGAAACATAAGGGG+CGG - chr1_1:55919235-55919254 Msa0030020:intron 45.0%
CTCCAACAAGATATGGAGCA+AGG - chr1_1:55919770-55919789 Msa0030020:intron 45.0%
CTACTTGGGGAATGATCTTC+TGG + chr1_1:55920030-55920049 None:intergenic 45.0%
ATTGGTTGTGTGTACGTGTC+CGG + chr1_1:55920494-55920513 None:intergenic 45.0%
CTATCAAATCTCTTCCTGGG+CGG - chr1_1:55920941-55920960 Msa0030020:intron 45.0%
! TTTTCACGAGAATCCCACGA+AGG + chr1_1:55921093-55921112 None:intergenic 45.0%
GTGTAACAGCTAGCAACCAT+GGG + chr1_1:55921450-55921469 None:intergenic 45.0%
TGTGTAACAGCTAGCAACCA+TGG + chr1_1:55921451-55921470 None:intergenic 45.0%
TACACAATGCAGTTGGCAGA+AGG - chr1_1:55921465-55921484 Msa0030020:intron 45.0%
ACACAATGCAGTTGGCAGAA+GGG - chr1_1:55921466-55921485 Msa0030020:intron 45.0%
TATAATGGTAAGGGCCGTGA+CGG + chr1_1:55921605-55921624 None:intergenic 45.0%
TCGAATCTCCACCCAAAACA+AGG - chr1_1:55922121-55922140 Msa0030020:CDS 45.0%
!!! TCTTTCAGCCTTGTTTTGGG+TGG + chr1_1:55922132-55922151 None:intergenic 45.0%
CAATGTCGGTAAGGAAGTCA+TGG - chr1_1:55922430-55922449 Msa0030020:intron 45.0%
! AGTCCAGTGCTACTGTTCAT+GGG - chr1_1:55922476-55922495 Msa0030020:intron 45.0%
AGGAGCAGATTCAAAACCAG+TGG - chr1_1:55922862-55922881 Msa0030020:intron 45.0%
TACAGATGATGCAGCATCAG+TGG + chr1_1:55923072-55923091 None:intergenic 45.0%
!! CTTGTGACGGCTCTAAACAA+AGG - chr1_1:55923092-55923111 Msa0030020:intron 45.0%
! AGTAGGGTATAGATTAGCCG+AGG - chr1_1:55923214-55923233 Msa0030020:CDS 45.0%
TAGAATTGAGCTAGTTGGCG+TGG - chr1_1:55923307-55923326 Msa0030020:intron 45.0%
GGAGAGCTATTATGACAAGG+AGG - chr1_1:55923692-55923711 Msa0030020:intron 45.0%
!! GCAAACTCGTTGATAATGCC+AGG - chr1_1:55923779-55923798 Msa0030020:intron 45.0%
CAGAACCAGGTTCCATTACT+GGG + chr1_1:55924061-55924080 None:intergenic 45.0%
ACAGAACCAGGTTCCATTAC+TGG + chr1_1:55924062-55924081 None:intergenic 45.0%
TCTTGATGTCTGCCCAACAA+AGG + chr1_1:55924379-55924398 None:intergenic 45.0%
! TGATGTGCCATGTATCGATG+TGG - chr1_1:55924414-55924433 Msa0030020:CDS 45.0%
GGAGATACCACATCGATACA+TGG + chr1_1:55924424-55924443 None:intergenic 45.0%
CTTGATGCGCCATCAAAGAA+AGG + chr1_1:55924765-55924784 None:intergenic 45.0%
!! CTTTCTTTGATGGCGCATCA+AGG - chr1_1:55924763-55924782 Msa0030020:intron 45.0%
GCATCCAAATTCTGGGTAGT+TGG - chr1_1:55924812-55924831 Msa0030020:intron 45.0%
AGGAGGAGATCTAGGGATAA+GGG + chr1_1:55924893-55924912 None:intergenic 45.0%
! GTTGAATGGTGGGAGAGTTT+AGG - chr1_1:55924917-55924936 Msa0030020:intron 45.0%
!!! GTTTTTCGGGCAAGGTAAAG+CGG + chr1_1:55924958-55924977 None:intergenic 45.0%
CCTTGCCCGAAAAACCAAAT+CGG - chr1_1:55924963-55924982 Msa0030020:intron 45.0%
! GTTGCTAGCGTTGTTGTTGT+TGG - chr1_1:55925023-55925042 Msa0030020:intron 45.0%
! AGCGTTGTTGTTGTTGGTGT+TGG - chr1_1:55925029-55925048 Msa0030020:intron 45.0%
TTGTCGAGACAGGAAGTTGA+TGG - chr1_1:55925128-55925147 Msa0030020:intron 45.0%
TTGATCGGATTCCTTGTTGG+CGG - chr1_1:55925155-55925174 Msa0030020:intron 45.0%
GGTATGCTAGCACCAATAAG+AGG + chr1_1:55925191-55925210 None:intergenic 45.0%
! TTGTTTTCACGCCCGTATGT+GGG - chr1_1:55925236-55925255 Msa0030020:intron 45.0%
TAGTCAACCCGACCAAACAA+GGG + chr1_1:55925347-55925366 None:intergenic 45.0%
TTCACACCTCTACATGGTTC+TGG + chr1_1:55925541-55925560 None:intergenic 45.0%
!!! TTTTAATAGAAAAATATAAA+TGG + chr1_1:55912596-55912615 None:intergenic 5.0%
!!! TTTAGTTTAATTAAAAATTT+AGG + chr1_1:55918301-55918320 None:intergenic 5.0%
!!! TATTTAAAATTTTAAAAATC+TGG + chr1_1:55918045-55918064 None:intergenic 5.0%
!!! AAAAAATTAAATCATTTTTT+CGG + chr1_1:55918927-55918946 None:intergenic 5.0%
!! GATTTAAAAAAATAAAAAAA+AGG - chr1_1:55919089-55919108 Msa0030020:intron 5.0%
!! ATAAACAATAATATATAATA+CGG + chr1_1:55920780-55920799 None:intergenic 5.0%
GAGCAACCTCACACATGTTG+TGG - chr1_1:55910184-55910203 Msa0030020:intron 50.0%
AGCCTCCATCGTCGAATCAA+TGG - chr1_1:55910208-55910227 Msa0030020:intron 50.0%
!! CACCATTGATTCGACGATGG+AGG + chr1_1:55910213-55910232 None:intergenic 50.0%
CTCCATCGTCGAATCAATGG+TGG - chr1_1:55910211-55910230 Msa0030020:intron 50.0%
!! GTAACCACAAGTGTCGGTGT+CGG - chr1_1:55910408-55910427 Msa0030020:intron 50.0%
! GTTTGTTGGTCTGCGATTCC+GGG - chr1_1:55910984-55911003 Msa0030020:intron 50.0%
! TTTGTTGGTCTGCGATTCCG+GGG - chr1_1:55910985-55911004 Msa0030020:intron 50.0%
CGCTTCCACTCTGTAGTTAG+AGG - chr1_1:55911081-55911100 Msa0030020:intron 50.0%
CTACGCCTCTAACTACAGAG+TGG + chr1_1:55911089-55911108 None:intergenic 50.0%
GTAGCCTACGTAGGCACAAT+TGG - chr1_1:55911105-55911124 Msa0030020:intron 50.0%
TGAATTAGGGTCCTCTCCGT+TGG + chr1_1:55911715-55911734 None:intergenic 50.0%
TTCTGCAGTGTATGGGGGTT+TGG + chr1_1:55911939-55911958 None:intergenic 50.0%
TGGTGTGAGTTGCATGCGAT+AGG + chr1_1:55912024-55912043 None:intergenic 50.0%
!! GGGGTTTTGGTCGGTTTTGA+TGG + chr1_1:55912062-55912081 None:intergenic 50.0%
ACTCCTCTCACTGTGGACAA+CGG + chr1_1:55912846-55912865 None:intergenic 50.0%
! GAGTCCAGTGTTGCTGCTTA+TGG - chr1_1:55912862-55912881 Msa0030020:CDS 50.0%
CAGTTTCGAGCATGTCGTCA+TGG + chr1_1:55913527-55913546 None:intergenic 50.0%
CAGAGATGATGCAGCATCAG+TGG + chr1_1:55913653-55913672 None:intergenic 50.0%
GGACGAGATGTGATCATGGA+TGG - chr1_1:55913694-55913713 Msa0030020:intron 50.0%
TGTAGAGCAGACGATAGCCA+TGG - chr1_1:55913738-55913757 Msa0030020:intron 50.0%
!! TATAGGTATCGAATGGGGGC+AGG - chr1_1:55913778-55913797 Msa0030020:intron 50.0%
! TTGCTACCTTTGGTGGACCA+CGG + chr1_1:55914203-55914222 None:intergenic 50.0%
ACACATCTTGCACATCGTGC+AGG - chr1_1:55915120-55915139 Msa0030020:intron 50.0%
AACAGCTCAGACCTAGGTGT+TGG - chr1_1:55915238-55915257 Msa0030020:intron 50.0%
GGTGAGTTTGTGACCATCGA+AGG + chr1_1:55915648-55915667 None:intergenic 50.0%
GGTAGGAAGGCTTGGAAACT+TGG + chr1_1:55915794-55915813 None:intergenic 50.0%
GCAAACAAGGTAGGAAGGCT+TGG + chr1_1:55915802-55915821 None:intergenic 50.0%
GGTGAGCAAACAAGGTAGGA+AGG + chr1_1:55915807-55915826 None:intergenic 50.0%
GGAAGGTGAGCAAACAAGGT+AGG + chr1_1:55915811-55915830 None:intergenic 50.0%
CAGAGGAAGGTGAGCAAACA+AGG + chr1_1:55915815-55915834 None:intergenic 50.0%
TATCGCTGACCCTTGTTCCA+TGG + chr1_1:55916030-55916049 None:intergenic 50.0%
TGAATCTTGGGGACTGAACC+GGG + chr1_1:55916168-55916187 None:intergenic 50.0%
GTGAATCTTGGGGACTGAAC+CGG + chr1_1:55916169-55916188 None:intergenic 50.0%
!! CCCCATGGTCAATTTTGACC+TGG - chr1_1:55917416-55917435 Msa0030020:intron 50.0%
GGCCCCTCATATAAGTGATG+TGG - chr1_1:55919158-55919177 Msa0030020:intron 50.0%
TAAAGCCATCCGCTTCACAC+TGG - chr1_1:55919928-55919947 Msa0030020:intron 50.0%
AACGGCAGTCAAACCAGCTA+AGG + chr1_1:55919960-55919979 None:intergenic 50.0%
TTACCGGCGACAAACATCCA+AGG - chr1_1:55919994-55920013 Msa0030020:intron 50.0%
TTGGTTGTGTGTACGTGTCC+GGG + chr1_1:55920493-55920512 None:intergenic 50.0%
TGCGGCATTCATGCAAGTAG+TGG + chr1_1:55920837-55920856 None:intergenic 50.0%
CACAATGCAGTTGGCAGAAG+GGG - chr1_1:55921467-55921486 Msa0030020:intron 50.0%
! GTGTTGGCAGCTAGGCAAAT+AGG - chr1_1:55921782-55921801 Msa0030020:intron 50.0%
TAAGGAAGTCATGGTCCCCA+TGG - chr1_1:55922439-55922458 Msa0030020:intron 50.0%
! GAGTCCAGTGCTACTGTTCA+TGG - chr1_1:55922475-55922494 Msa0030020:intron 50.0%
CAAAGGGCGAGATGTGATCA+TGG - chr1_1:55923109-55923128 Msa0030020:intron 50.0%
! GGGTATAGATTAGCCGAGGA+TGG - chr1_1:55923218-55923237 Msa0030020:CDS 50.0%
! CTAGTTGGCGTGGTTTGTGA+TGG - chr1_1:55923317-55923336 Msa0030020:intron 50.0%
TTATGACAAGGAGGGCAGTG+AGG - chr1_1:55923701-55923720 Msa0030020:intron 50.0%
TATGACAAGGAGGGCAGTGA+GGG - chr1_1:55923702-55923721 Msa0030020:intron 50.0%
CAGCTTATTGGGTGGAAGGA+TGG - chr1_1:55923930-55923949 Msa0030020:intron 50.0%
CAAGGAACCTAGCCCAGTAA+TGG - chr1_1:55924046-55924065 Msa0030020:intron 50.0%
TGCCCAACAAAGGTCTGAAG+TGG + chr1_1:55924369-55924388 None:intergenic 50.0%
AAGATGCAAGTCATGGGGGA+AGG + chr1_1:55924445-55924464 None:intergenic 50.0%
GTGTCTATGCACAAACCACG+AGG + chr1_1:55924523-55924542 None:intergenic 50.0%
!! CTTTGATGGCGCATCAAGGT+CGG - chr1_1:55924767-55924786 Msa0030020:intron 50.0%
GAGGAGGAGATCTAGGGATA+AGG + chr1_1:55924894-55924913 None:intergenic 50.0%
AACGTGGAGGAGGAGATCTA+GGG + chr1_1:55924900-55924919 None:intergenic 50.0%
ATCTCCTCCTCCACGTTGAA+TGG - chr1_1:55924903-55924922 Msa0030020:intron 50.0%
AACTCTCCCACCATTCAACG+TGG + chr1_1:55924916-55924935 None:intergenic 50.0%
GGGAGAGTTTAGGTATTCGC+TGG - chr1_1:55924927-55924946 Msa0030020:intron 50.0%
!!! CCGATTTGGTTTTTCGGGCA+AGG + chr1_1:55924966-55924985 None:intergenic 50.0%
GGTCGGCACATTCCTCTTAT+TGG - chr1_1:55925176-55925195 Msa0030020:intron 50.0%
!! CTTGTTTTCACGCCCGTATG+TGG - chr1_1:55925235-55925254 Msa0030020:intron 50.0%
CTAGTCAACCCGACCAAACA+AGG + chr1_1:55925348-55925367 None:intergenic 50.0%
!! TGTTTGGTCGGGTTGACTAG+TGG - chr1_1:55925348-55925367 Msa0030020:intron 50.0%
! GGTTCTGGCAGCAACCATAT+TGG + chr1_1:55925526-55925545 None:intergenic 50.0%
TTGCTGCCAGAACCATGTAG+AGG - chr1_1:55925532-55925551 Msa0030020:intron 50.0%
AGGCTGCCACAACATGTGTG+AGG + chr1_1:55910193-55910212 None:intergenic 55.0%
CTCAATTTGGGCAACACGGC+CGG + chr1_1:55910276-55910295 None:intergenic 55.0%
GTGTCGGACACGACATGTGT+TGG - chr1_1:55910424-55910443 Msa0030020:intron 55.0%
GTCCAAAGGGCAATCGCTCT+CGG + chr1_1:55910953-55910972 None:intergenic 55.0%
GAGCGATTGCCCTTTGGACT+TGG - chr1_1:55910954-55910973 Msa0030020:intron 55.0%
! GTTAGAGGCGTAGCCTACGT+AGG - chr1_1:55911096-55911115 Msa0030020:intron 55.0%
!! TGGGGGTTTGGCGTTGGTTT+CGG + chr1_1:55911927-55911946 None:intergenic 55.0%
AGTGTATGGGGGTTTGGCGT+TGG + chr1_1:55911933-55911952 None:intergenic 55.0%
TTCCACTACCAATCGACCCC+CGG - chr1_1:55912163-55912182 Msa0030020:intron 55.0%
ACACTGGACTCCTCTCACTG+TGG + chr1_1:55912853-55912872 None:intergenic 55.0%
CCACCCATAAGCAGCAACAC+TGG + chr1_1:55912869-55912888 None:intergenic 55.0%
! CCAGTGTTGCTGCTTATGGG+TGG - chr1_1:55912866-55912885 Msa0030020:CDS 55.0%
! GTGTTGCTGCTTATGGGTGG+AGG - chr1_1:55912869-55912888 Msa0030020:CDS 55.0%
! CTGCTTATGGGTGGAGGCAT+GGG - chr1_1:55912875-55912894 Msa0030020:CDS 55.0%
TGATGTCCGTGGTCCACCAA+AGG - chr1_1:55914194-55914213 Msa0030020:CDS 55.0%
ACCAACACTGCTATGGGACC+TGG - chr1_1:55914438-55914457 Msa0030020:intron 55.0%
CTATGGGACCTGGCACTGTT+TGG - chr1_1:55914448-55914467 Msa0030020:intron 55.0%
CCTAGGTCTGAGCTGTTCAC+TGG + chr1_1:55915235-55915254 None:intergenic 55.0%
CCAGTGAACAGCTCAGACCT+AGG - chr1_1:55915232-55915251 Msa0030020:intron 55.0%
! CGTTGCACTTTTGGCCCCAA+TGG + chr1_1:55919217-55919236 None:intergenic 55.0%
GGCAGTCAAACCAGCTAAGG+AGG + chr1_1:55919957-55919976 None:intergenic 55.0%
TGTTTGTCGCCGGTAATGCG+AGG + chr1_1:55919990-55920009 None:intergenic 55.0%
CCACCTTGGATGTTTGTCGC+CGG + chr1_1:55920000-55920019 None:intergenic 55.0%
CGGCGACAAACATCCAAGGT+GGG - chr1_1:55919998-55920017 Msa0030020:intron 55.0%
CTTCTGGTCTACTCCCACCT+TGG + chr1_1:55920014-55920033 None:intergenic 55.0%
CTCTTCCTGGGCGGAAAACA+AGG - chr1_1:55920950-55920969 Msa0030020:intron 55.0%
TTCCTGGGCGGAAAACAAGG+AGG - chr1_1:55920953-55920972 Msa0030020:intron 55.0%
!!! AGGTGGCGGGGTATGGTTTT+AGG - chr1_1:55920973-55920992 Msa0030020:intron 55.0%
GATGCTTTGGTCGCACGCTT+TGG + chr1_1:55921870-55921889 None:intergenic 55.0%
CACTGGACTCCTCTCACTGT+GGG + chr1_1:55912852-55912871 None:intergenic 55.0%
CCACCCATGAACAGTAGCAC+TGG + chr1_1:55922482-55922501 None:intergenic 55.0%
! CCAGTGCTACTGTTCATGGG+TGG - chr1_1:55922479-55922498 Msa0030020:intron 55.0%
! GTGCTACTGTTCATGGGTGG+CGG - chr1_1:55922482-55922501 Msa0030020:intron 55.0%
GCATCTGCCTCAACAACCAC+TGG + chr1_1:55922881-55922900 None:intergenic 55.0%
CCAGGTTCCATTACTGGGCT+AGG + chr1_1:55924056-55924075 None:intergenic 55.0%
! CCTAGCCCAGTAATGGAACC+TGG - chr1_1:55924053-55924072 Msa0030020:intron 55.0%
TAAGGCAAAGAGGGATGGCG+TGG + chr1_1:55924341-55924360 None:intergenic 55.0%
CAACGTGGAGGAGGAGATCT+AGG + chr1_1:55924901-55924920 None:intergenic 55.0%
TCCTCCTCCACGTTGAATGG+TGG - chr1_1:55924906-55924925 Msa0030020:intron 55.0%
CCTCCTCCACGTTGAATGGT+GGG - chr1_1:55924907-55924926 Msa0030020:intron 55.0%
TCTCCCACCATTCAACGTGG+AGG + chr1_1:55924913-55924932 None:intergenic 55.0%
TCGGATTCCTTGTTGGCGGT+CGG - chr1_1:55925159-55925178 Msa0030020:intron 55.0%
AACCGAGCAAGCCCACATAC+GGG + chr1_1:55925250-55925269 None:intergenic 55.0%
CAACCGAGCAAGCCCACATA+CGG + chr1_1:55925251-55925270 None:intergenic 55.0%
GTGTCCGACACCGACACTTG+TGG + chr1_1:55910415-55910434 None:intergenic 60.0%
AGCCGAGAGCGATTGCCCTT+TGG - chr1_1:55910948-55910967 Msa0030020:intron 60.0%
ATTATCACCCACCGGCACCC+CGG + chr1_1:55911005-55911024 None:intergenic 60.0%
!! GGGTTTGGCGTTGGTTTCGG+TGG + chr1_1:55911924-55911943 None:intergenic 60.0%
TGGTGTCTTCTCCAGCGGAC+CGG + chr1_1:55912185-55912204 None:intergenic 60.0%
CCTCTCACTGTGGACAACGG+CGG + chr1_1:55912843-55912862 None:intergenic 60.0%
GCTGCTTATGGGTGGAGGCA+TGG - chr1_1:55912874-55912893 Msa0030020:CDS 60.0%
! ATGGGTGGAGGCATGGGATC+TGG - chr1_1:55912881-55912900 Msa0030020:CDS 60.0%
GCCAGGTCCCATAGCAGTGT+TGG + chr1_1:55914442-55914461 None:intergenic 60.0%
! CGTTGCACTTTTGGCCCCCA+TGG - chr1_1:55917401-55917420 Msa0030020:intron 60.0%
TGACCTGGTCCACGCTGACA+TGG - chr1_1:55917431-55917450 Msa0030020:intron 60.0%
! ATGTGGGTGCCATGTCAGCG+TGG + chr1_1:55919175-55919194 None:intergenic 60.0%
! ATGTGGGTGCCATGTCAGCG+TGG - chr1_1:55919175-55919194 Msa0030020:intron 60.0%
TGACCTGGTCCACGCTGACA+TGG + chr1_1:55917431-55917450 None:intergenic 60.0%
GACGGGGACACAGTGTGGAT+AGG + chr1_1:55919473-55919492 None:intergenic 60.0%
! CGTATGACGGGGACACAGTG+TGG + chr1_1:55919478-55919497 None:intergenic 60.0%
AGGAGGCAGCCAGTGTGAAG+CGG + chr1_1:55919940-55919959 None:intergenic 60.0%
! ACACTGGCTGCCTCCTTAGC+TGG - chr1_1:55919944-55919963 Msa0030020:intron 60.0%
GTAATGCGAGGCGGCAGCAA+CGG + chr1_1:55919978-55919997 None:intergenic 60.0%
TTGCTGCCGCCTCGCATTAC+CGG - chr1_1:55919978-55919997 Msa0030020:intron 60.0%
TTGTCGCCGGTAATGCGAGG+CGG + chr1_1:55919987-55920006 None:intergenic 60.0%
CCGGCGACAAACATCCAAGG+TGG - chr1_1:55919997-55920016 Msa0030020:intron 60.0%
!!! CACCTCCTTGTTTTCCGCCC+AGG + chr1_1:55920958-55920977 None:intergenic 60.0%
CTGGGCGGAAAACAAGGAGG+TGG - chr1_1:55920956-55920975 Msa0030020:intron 60.0%
GGCGGAAAACAAGGAGGTGG+CGG - chr1_1:55920959-55920978 Msa0030020:intron 60.0%
GCGGAAAACAAGGAGGTGGC+GGG - chr1_1:55920960-55920979 Msa0030020:intron 60.0%
CGGAAAACAAGGAGGTGGCG+GGG - chr1_1:55920961-55920980 Msa0030020:intron 60.0%
!! AACAAGGAGGTGGCGGGGTA+TGG - chr1_1:55920966-55920985 Msa0030020:intron 60.0%
TCCTCTCACTGTGGGCCATG+GGG + chr1_1:55922457-55922476 None:intergenic 60.0%
CTCCTCTCACTGTGGGCCAT+GGG + chr1_1:55922458-55922477 None:intergenic 60.0%
ACTCCTCTCACTGTGGGCCA+TGG + chr1_1:55922459-55922478 None:intergenic 60.0%
GCACTGGACTCCTCTCACTG+TGG + chr1_1:55922466-55922485 None:intergenic 60.0%
! ACTGTTCATGGGTGGCGGCA+TGG - chr1_1:55922487-55922506 Msa0030020:intron 60.0%
! CTGTTCATGGGTGGCGGCAT+GGG - chr1_1:55922488-55922507 Msa0030020:intron 60.0%
! GTCACACCTCGACTTGACGC+AGG - chr1_1:55922663-55922682 Msa0030020:intron 60.0%
! ACCTCGACTTGACGCAGGTG+TGG - chr1_1:55922668-55922687 Msa0030020:intron 60.0%
! CCTCGACTTGACGCAGGTGT+GGG - chr1_1:55922669-55922688 Msa0030020:intron 60.0%
CGATGTTGGGGTCCCACCAA+AGG - chr1_1:55923816-55923835 Msa0030020:intron 60.0%
!! TCAAGGTCGGCAAAGCGTCG+TGG - chr1_1:55924780-55924799 Msa0030020:intron 60.0%
CCCACCATTCAACGTGGAGG+AGG + chr1_1:55924910-55924929 None:intergenic 60.0%
! GAATGTGCCGACCGCCAACA+AGG + chr1_1:55925169-55925188 None:intergenic 60.0%
TTGGGCAACACGGCCGGATG+TGG + chr1_1:55910270-55910289 None:intergenic 65.0%
GCGGAGTGGCAAACACCACC+TGG + chr1_1:55910683-55910702 None:intergenic 65.0%
GACCGGGGGTCGATTGGTAG+TGG + chr1_1:55912168-55912187 None:intergenic 65.0%
TGTCTTCTCCAGCGGACCGG+GGG + chr1_1:55912182-55912201 None:intergenic 65.0%
GTGTCTTCTCCAGCGGACCG+GGG + chr1_1:55912183-55912202 None:intergenic 65.0%
GGTGTCTTCTCCAGCGGACC+GGG + chr1_1:55912184-55912203 None:intergenic 65.0%
CCGCCGTTGTCCACAGTGAG+AGG - chr1_1:55912840-55912859 Msa0030020:CDS 65.0%
GTGCCATGTCAGCGTGGACC+AGG + chr1_1:55919181-55919200 None:intergenic 65.0%
GTGCCATGTCAGCGTGGACC+AGG - chr1_1:55919181-55919200 Msa0030020:intron 65.0%
GGCAGCCAGTGTGAAGCGGA+TGG + chr1_1:55919936-55919955 None:intergenic 65.0%
TGGTAAGGGCCGTGACGGCT+TGG + chr1_1:55921600-55921619 None:intergenic 65.0%
TCCCCATGGCCCACAGTGAG+AGG - chr1_1:55922453-55922472 Msa0030020:intron 65.0%
CCCACACCTGCGTCAAGTCG+AGG + chr1_1:55922672-55922691 None:intergenic 65.0%
CGACTTGACGCAGGTGTGGG+TGG - chr1_1:55922672-55922691 Msa0030020:intron 65.0%
! CGCCCGTATGTGGGCTTGCT+CGG - chr1_1:55925245-55925264 Msa0030020:intron 65.0%
GGTCTGCGATTCCGGGGTGC+CGG - chr1_1:55910991-55911010 Msa0030020:intron 70.0%
!! TGCGATTCCGGGGTGCCGGT+GGG - chr1_1:55910995-55911014 Msa0030020:intron 70.0%
! ATGGGTGGCGGCATGGGAGC+TGG - chr1_1:55922494-55922513 Msa0030020:CDS 70.0%
!! CTGCGATTCCGGGGTGCCGG+TGG - chr1_1:55910994-55911013 Msa0030020:intron 75.0%
CCAGCGGACCGGGGGTCGAT+TGG + chr1_1:55912174-55912193 None:intergenic 75.0%
CCAATCGACCCCCGGTCCGC+TGG - chr1_1:55912171-55912190 Msa0030020:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 55910101 55925947 55910101 ID=Msa0030020;Name=Msa0030020
chr1_1 mRNA 55910101 55925947 55910101 ID=Msa0030020-mRNA-1;Parent=Msa0030020;Name=Msa0030020-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0.52|0.38|0.94|0.64|0.61|18|0|890
chr1_1 exon 55925770 55925947 55925770 ID=Msa0030020-mRNA-1:exon:16735;Parent=Msa0030020-mRNA-1
chr1_1 exon 55924224 55924447 55924224 ID=Msa0030020-mRNA-1:exon:16734;Parent=Msa0030020-mRNA-1
chr1_1 exon 55923625 55923686 55923625 ID=Msa0030020-mRNA-1:exon:16733;Parent=Msa0030020-mRNA-1
chr1_1 exon 55923112 55923324 55923112 ID=Msa0030020-mRNA-1:exon:16732;Parent=Msa0030020-mRNA-1
chr1_1 exon 55922494 55922620 55922494 ID=Msa0030020-mRNA-1:exon:16731;Parent=Msa0030020-mRNA-1
chr1_1 exon 55922404 55922411 55922404 ID=Msa0030020-mRNA-1:exon:16730;Parent=Msa0030020-mRNA-1
chr1_1 exon 55922068 55922265 55922068 ID=Msa0030020-mRNA-1:exon:16729;Parent=Msa0030020-mRNA-1
chr1_1 exon 55921833 55921977 55921833 ID=Msa0030020-mRNA-1:exon:16728;Parent=Msa0030020-mRNA-1
chr1_1 exon 55921547 55921730 55921547 ID=Msa0030020-mRNA-1:exon:16727;Parent=Msa0030020-mRNA-1
chr1_1 exon 55915945 55916133 55915945 ID=Msa0030020-mRNA-1:exon:16726;Parent=Msa0030020-mRNA-1
chr1_1 exon 55914033 55914256 55914033 ID=Msa0030020-mRNA-1:exon:16725;Parent=Msa0030020-mRNA-1
chr1_1 exon 55913876 55913937 55913876 ID=Msa0030020-mRNA-1:exon:16724;Parent=Msa0030020-mRNA-1
chr1_1 exon 55913499 55913699 55913499 ID=Msa0030020-mRNA-1:exon:16723;Parent=Msa0030020-mRNA-1
chr1_1 exon 55913069 55913198 55913069 ID=Msa0030020-mRNA-1:exon:16722;Parent=Msa0030020-mRNA-1
chr1_1 exon 55912829 55912992 55912829 ID=Msa0030020-mRNA-1:exon:16721;Parent=Msa0030020-mRNA-1
chr1_1 exon 55912720 55912822 55912720 ID=Msa0030020-mRNA-1:exon:16720;Parent=Msa0030020-mRNA-1
chr1_1 exon 55911867 55912115 55911867 ID=Msa0030020-mRNA-1:exon:16719;Parent=Msa0030020-mRNA-1
chr1_1 exon 55910101 55910112 55910101 ID=Msa0030020-mRNA-1:exon:16718;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55925770 55925947 55925770 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55924224 55924447 55924224 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55923625 55923686 55923625 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55923112 55923324 55923112 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55922494 55922620 55922494 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55922404 55922411 55922404 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55922068 55922265 55922068 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55921833 55921977 55921833 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55921547 55921730 55921547 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55915945 55916133 55915945 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55914033 55914256 55914033 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55913876 55913937 55913876 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55913499 55913699 55913499 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55913069 55913198 55913069 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55912829 55912992 55912829 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55912720 55912822 55912720 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55911867 55912115 55911867 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
chr1_1 CDS 55910101 55910112 55910101 ID=Msa0030020-mRNA-1:cds;Parent=Msa0030020-mRNA-1
Gene Sequence

>Msa0030020

ATGACGGTAACATCTATTTGTGATTCTCAATCTTCAAACAACATACAGCTACAAGGTACTACTGGTAGTGTTGGTAATGTGATGAGCAACCTCACACATGTTGTGGCAGCCTCCATCGTCGAATCAATGGTGGTAGACTCCAAGATCATTCCCCACTTACATCAAACCACATCCGGCCCTAGGCAAATAGGATTTGTTGATGCTAGTGAGGTTCCAGAGTTATGCAGATTGGCACAGGACTACTTGAGAAATTCTGAAGAGTGTAAAGAAAGTATCTATCAATATCTAGCCAACGGAGAGGACCCTAATTCACTATATGCAAAATTGATTGATGAGTTTGAAAGATGCATCCTCAGTTATTTCGCTTTTCATTGGAACCAAGCTTCATATATCATTAGTCAGGTATTGAGTACCGAGTCCCAACCGAAAATACATCTCAAAAATATTCTTTTGGCAGCCACAAGGGAACATAGATTTAAGAGAGTAGCAAAGAATCTAAAGGTGACAAGAGTGTTCTCTACTTTAGTAGAAGAGATTAAAGCAATAAAGGGAGACTCTCAAAGTTGTGACGTCAAGGACTCCGCCGTTGTCCACAGTGAGAGGAGTCCAGTGTTGCTGCTTATGGGTGGAGGCATGGGATCTGGAAAAAGCTATGTTCTTAAAGACATTCTAAAAGAATCATTTTGGTCTGAAGCTTCAAATGCTGTGGTCGTTGAAGCTGATGCGTTTAAGGAGAGTGATGTCATATATAAAGCTCTTAACTCTAGGGGTCACCATGACGACATGCTCGAAACTGCTGAATTGGTGCATCAGTATCGAATGGGGGCAGGATATAGAGAAGCTAAAGATGGGACAATAACTGAAAATTATTGGGAGCAAGTTAATGAGGCCGAAGAAGAGCACGAATCAAAGGAAAATTATAAAAGGGAACTACACACTCGAAAGCCCTACAGAATTGTGCTAGTTGGTGTGGTTTGTGATGGCTATCTTGCTGTTGTTAGAGGCATTAGGAGAGCTATCATGACAAGAAGGGCAGTGAGGGTGAAATCACAACTGGAATCTCACAAAAGATTTGCTAATGCATTTCCAAAATATTGCAAACTTGTTGACAGTGCAAGGCTCTATTACACGACTGATGTCCGTGGTCCACCAAAGTTAATAGAATGGACGAATGATTCTCACAATCTACAAGTGGAACCTGAAGTTCTCAAATGCTTGGAAATGATAAGCAGTTTAAATACCGAGGCAGATTCCATCTACGAACTTTATAATGAAACCAACACTGCTATGGGACCTGGCACTGTTTGGAATGACATTGTTCTTTCTCCTTCAAGGTCAAATGGTTCTATTGGTAAAGCCATCCGCTTCACACTGGCTGCCTCCTTAGCTGGTTTGACTGCCGTTGCTGCCGCCTCGCATTACCGGCGACAAACATCCAAGGTGGGAGTAGACCAGAAGATCATTCCCCAAGTAGATATAAAACAATCTGGTCGTTTAGAGAAGATTGAAAAATTCTCTGACTATGTTGCTAGGCAAATAGGATTTGAAGATGCAAGTGAGGTCCCAAAGTTATGCAAACTTGCCCAAGAATATCTACAGAAATCCAAAGCGTGCGACCAAAGCATCTATGCATATCTTGCCAATGAAAAGGACTCTGAATCTCTTTATGTTAAGTTGGTTGATGAGTTTGAGAGATGCATCCTCAGTTATTTTGCATTTCATTGGAAACAAGCTCCATATATCATTAGTCAGGTATTGAGTATCGAATCTCCACCCAAAACAAGGCTGAAAGAAATTATTTTGGCAGCTACAAGGAAACAAAGGTTTGAGAGAGTAACCAAGAATTTGAAGGTGACAAGAGTGTTCTCTACTTTGGTAGAAGAGATGAAAACAATCAATGTCGGTAAGGAAGTCATGGTCCCCATGGCCCACAGTGAGAGGAGTCCAGTGCTACTGTTCATGGGTGGCGGCATGGGAGCTGGAAAGAGCAGTGTTCTTAAAAACATTCTTAAAGAATCATTTTGGTCAGGAGCAGATTCAAAACCAGTGGTTGTTGAGGCAGATGCTTTTAAGGAGAGTGATGTTATATATAAAGCCCTTCACAATAGGGGTCATTATGATGACATGCTTCTAACAGCTGAATATGTGCATAAGTCTTCCACTGATGCTGCATCATCTGTACTTGTGACGGCTCTAAACAAAGGGCGAGATGTGATCATGGACAGTACCTTATCATGGGAACCTTTTTTCGAGCAGACTATTGCTATGGCAAGAAATGTTCACAAATATAAATACAGAATGGGAGTAGGATTAGCCGAGGATGGTACAGTTAATGAAAATTACTGGGAGCAAGTGAATGAAGCAGAAGAACATCATACTCGAAAGCCTTATAGAATTGAGCTAGTTGGCGTGCTTATTGGGTGGAAGGATGGTGATAACAATCTATTAGTGGATCCTGAAGATATAAAAAGCTTGAACAATGTAACAAGTTTGAATACTGAAGCTGATTCCATCTATGAACTTCACAAGGAACCTAGCCCAGTAATGGAACCTGGTTCTGTTTGGAATGACTTTGTTTTGTCACCTTCAAGGTCAAGTGTTCAGAAAGAGTTAAGGGAATCCATTCTTAAAATAGAAAAGTCTATAAAAAAATCAACAAGTGTTTCCAAATAA
Protein sequence

>Msa0030020

MTVTSICDSQSSNNIQLQGTTGSVGNVMSNLTHVVAASIVESMVVDSKIIPHLHQTTSGPRQIGFVDASEVPELCRLAQDYLRNSEECKESIYQYLANGEDPNSLYAKLIDEFERCILSYFAFHWNQASYIISQVLSTESQPKIHLKNILLAATREHRFKRVAKNLKVTRVFSTLVEEIKAIKGDSQSCDVKDSAVVHSERSPVLLLMGGGMGSGKSYVLKDILKESFWSEASNAVVVEADAFKESDVIYKALNSRGHHDDMLETAELVHQYRMGAGYREAKDGTITENYWEQVNEAEEEHESKENYKRELHTRKPYRIVLVGVVCDGYLAVVRGIRRAIMTRRAVRVKSQLESHKRFANAFPKYCKLVDSARLYYTTDVRGPPKLIEWTNDSHNLQVEPEVLKCLEMISSLNTEADSIYELYNETNTAMGPGTVWNDIVLSPSRSNGSIGKAIRFTLAASLAGLTAVAAASHYRRQTSKVGVDQKIIPQVDIKQSGRLEKIEKFSDYVARQIGFEDASEVPKLCKLAQEYLQKSKACDQSIYAYLANEKDSESLYVKLVDEFERCILSYFAFHWKQAPYIISQVLSIESPPKTRLKEIILAATRKQRFERVTKNLKVTRVFSTLVEEMKTINVGKEVMVPMAHSERSPVLLFMGGGMGAGKSSVLKNILKESFWSGADSKPVVVEADAFKESDVIYKALHNRGHYDDMLLTAEYVHKSSTDAASSVLVTALNKGRDVIMDSTLSWEPFFEQTIAMARNVHKYKYRMGVGLAEDGTVNENYWEQVNEAEEHHTRKPYRIELVGVLIGWKDGDNNLLVDPEDIKSLNNVTSLNTEADSIYELHKEPSPVMEPGSVWNDFVLSPSRSSVQKELRESILKIEKSIKKSTSVSK*