Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030810 | XP_013468812.1 | 95.171 | 497 | 24 | 0 | 1 | 497 | 1 | 497 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030810 | sp|P38222|RKM3_YEAST | 27.147 | 361 | 204 | 11 | 28 | 334 | 32 | 387 | 4.34e-20 | 97.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0030810 | TR | SET |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030810 | Msa0078220 | 0.960002 | 4.561970e-118 | -8.615850e-47 |
| Msa0030810 | Msa1438170 | 0.960165 | 2.995239e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030810 | MtrunA17_Chr1g0188461 | 95.171 | 497 | 24 | 0 | 1 | 497 | 1 | 497 | 0.0 | 909 |
| Msa0030810 | MtrunA17_Chr4g0042701 | 29.798 | 198 | 125 | 6 | 6 | 197 | 55 | 244 | 5.95e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0030810 | AT3G56570.1 | 54.851 | 536 | 195 | 9 | 1 | 495 | 1 | 530 | 0.0 | 540 |
| Msa0030810 | AT3G56570.2 | 54.749 | 537 | 195 | 10 | 1 | 495 | 1 | 531 | 0.0 | 535 |
| Msa0030810 | AT1G14030.1 | 27.638 | 199 | 128 | 6 | 6 | 197 | 49 | 238 | 2.80e-11 | 66.2 |
Find 100 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAACGGATATTCCTTCTTC+TGG | 0.208879 | 1_1:+57281456 | None:intergenic |
| TGCTTGTTTGGGTGGTTATT+TGG | 0.212284 | 1_1:-57281334 | Msa0030810:CDS |
| ATTTAATACTTACGGGATAT+TGG | 0.228032 | 1_1:-57278244 | Msa0030810:CDS |
| CAAAGCATCACAAATTTCTT+TGG | 0.259751 | 1_1:+57277831 | None:intergenic |
| ATTGTAAGACAAGCTTTCTT+TGG | 0.277640 | 1_1:+57281390 | None:intergenic |
| ATAGATGATTACCATGGTTT+TGG | 0.280289 | 1_1:-57280036 | Msa0030810:CDS |
| GATTTCACACAATGCTTTAA+CGG | 0.292015 | 1_1:+57281440 | None:intergenic |
| GCTTGTTTGGGTGGTTATTT+GGG | 0.306425 | 1_1:-57281333 | Msa0030810:CDS |
| AAGCTTAACTCGGAATTCTT+TGG | 0.307286 | 1_1:-57280111 | Msa0030810:CDS |
| GATCATTGAAAATGCTTGTT+TGG | 0.311113 | 1_1:-57281346 | Msa0030810:CDS |
| TGATATCGTGAACATTGATT+TGG | 0.321625 | 1_1:-57278169 | Msa0030810:CDS |
| TCGAGAAGAAATAAGACTTT+TGG | 0.326128 | 1_1:+57280068 | None:intergenic |
| TTTAATACTTACGGGATATT+GGG | 0.328807 | 1_1:-57278243 | Msa0030810:CDS |
| GCTGCTTTGCTACATAGATA+TGG | 0.329797 | 1_1:-57278216 | Msa0030810:CDS |
| TAACGGATATTCCTTCTTCT+GGG | 0.338446 | 1_1:+57281457 | None:intergenic |
| AGATGATGTATAATAAAATA+AGG | 0.350807 | 1_1:+57277998 | None:intergenic |
| TCAACAGGAATGTTTGCCTT+TGG | 0.352496 | 1_1:-57281235 | Msa0030810:CDS |
| TATTATGTATGAGAGGAGTT+TGG | 0.353787 | 1_1:-57281298 | Msa0030810:CDS |
| TACAGGTATTTAATACTTAC+GGG | 0.360220 | 1_1:-57278251 | Msa0030810:intron |
| TCCAGATTCAATCATAAAAC+TGG | 0.369547 | 1_1:-57278731 | Msa0030810:intron |
| AATTCCGAGTTAAGCTTTGA+AGG | 0.381928 | 1_1:+57280117 | None:intergenic |
| AGGAATGTTTGCCTTTGGTT+TGG | 0.382903 | 1_1:-57281230 | Msa0030810:CDS |
| TATTTCGAGATATCATTTGA+TGG | 0.393572 | 1_1:-57278039 | Msa0030810:CDS |
| ATCATTGAAAATGCTTGTTT+GGG | 0.394754 | 1_1:-57281345 | Msa0030810:CDS |
| ATACAGGTATTTAATACTTA+CGG | 0.399560 | 1_1:-57278252 | Msa0030810:intron |
| TTTGGGTGAGGAGTCTCCTT+GGG | 0.403541 | 1_1:-57281280 | Msa0030810:CDS |
| TTGAAGGTTCTGAATCCAAC+AGG | 0.407785 | 1_1:+57280133 | None:intergenic |
| GTGTGGTACTGAGCTTCATC+AGG | 0.410493 | 1_1:-57281181 | Msa0030810:intron |
| TTGTGATGCTTTGTTGTCAC+TGG | 0.418159 | 1_1:-57277821 | Msa0030810:CDS |
| CGTGAACATTGATTTGGAAC+TGG | 0.422905 | 1_1:-57278163 | Msa0030810:CDS |
| ACTAGCTCAAAATTCCTCTA+TGG | 0.423306 | 1_1:-57278624 | Msa0030810:CDS |
| GATATGAGGGAGAGTCTCTA+TGG | 0.435839 | 1_1:-57277796 | Msa0030810:CDS |
| GTATCCCTTTGGAGAAGGTT+AGG | 0.436779 | 1_1:-57278090 | Msa0030810:CDS |
| TGTTGTCACTGGCTGATATG+AGG | 0.437422 | 1_1:-57277810 | Msa0030810:CDS |
| GTTTGGGTGAGGAGTCTCCT+TGG | 0.451724 | 1_1:-57281281 | Msa0030810:CDS |
| TAGAAAGCTGTATCATTCTT+CGG | 0.452010 | 1_1:-57277716 | Msa0030810:CDS |
| GTATGAGAGGAGTTTGGGTG+AGG | 0.461310 | 1_1:-57281292 | Msa0030810:CDS |
| AATTTATTGTAAACATCATC+CGG | 0.467200 | 1_1:+57277970 | None:intergenic |
| ATCAATGTTCACGATATCAT+AGG | 0.469295 | 1_1:+57278173 | None:intergenic |
| ATTATGTATGAGAGGAGTTT+GGG | 0.471089 | 1_1:-57281297 | Msa0030810:CDS |
| GGTGAGGAGTCTCCTTGGGA+GGG | 0.476313 | 1_1:-57281276 | Msa0030810:CDS |
| AGAGAATATTCTACCCCTGT+TGG | 0.478060 | 1_1:-57280148 | Msa0030810:CDS |
| TCTTGATCTGCTGTGGCGGT+TGG | 0.480949 | 1_1:+57278113 | None:intergenic |
| GCAGATCAAGAGTATCCCTT+TGG | 0.481702 | 1_1:-57278101 | Msa0030810:CDS |
| GGGTGAGGAGTCTCCTTGGG+AGG | 0.482372 | 1_1:-57281277 | Msa0030810:CDS |
| GAGCAACACATTGCAATTTG+TGG | 0.492207 | 1_1:-57281484 | Msa0030810:CDS |
| CTGCCGGGAAGAAGTTGAAA+AGG | 0.500058 | 1_1:-57277612 | Msa0030810:CDS |
| ATTACCAATCCTAGCTCTGC+CGG | 0.507959 | 1_1:-57277628 | Msa0030810:CDS |
| TCTATGGATAAAACTGAGAA+AGG | 0.508864 | 1_1:-57278608 | Msa0030810:CDS |
| AACTTCTTCCCGGCAGAGCT+AGG | 0.522039 | 1_1:+57277619 | None:intergenic |
| ATCAATAGAAGATGATATTG+AGG | 0.522287 | 1_1:-57277767 | Msa0030810:CDS |
| ATAGCCTAACCTTCTCCAAA+GGG | 0.523725 | 1_1:+57278086 | None:intergenic |
| GTTGCTCCATTCGAATCCAT+TGG | 0.527285 | 1_1:+57281500 | None:intergenic |
| GCTCAGTACCACACAAAAGC+TGG | 0.530815 | 1_1:+57281190 | None:intergenic |
| TGAGGATGATACTTCAATGC+TGG | 0.532383 | 1_1:-57278552 | Msa0030810:CDS |
| GAAAGGCGTTGATAGCGAAA+TGG | 0.533293 | 1_1:-57278591 | Msa0030810:CDS |
| CAAGAGTATCCCTTTGGAGA+AGG | 0.539836 | 1_1:-57278095 | Msa0030810:CDS |
| TTTGTGGACACCCCAGAAGA+AGG | 0.540799 | 1_1:-57281468 | Msa0030810:CDS |
| GTTGTCACTGGCTGATATGA+GGG | 0.545553 | 1_1:-57277809 | Msa0030810:CDS |
| TTACCAATCCTAGCTCTGCC+GGG | 0.546566 | 1_1:-57277627 | Msa0030810:CDS |
| TCTCTCTGGCAATGGCAACC+AGG | 0.547917 | 1_1:-57281648 | None:intergenic |
| GCTTCACTTACAGATCTGCC+AGG | 0.550005 | 1_1:+57280004 | None:intergenic |
| CTTCCCGGCAGAGCTAGGAT+TGG | 0.554666 | 1_1:+57277624 | None:intergenic |
| AGAACCTTCAAAGCTTAACT+CGG | 0.555964 | 1_1:-57280121 | Msa0030810:CDS |
| TGATACTTCAATGCTGGAGA+TGG | 0.557586 | 1_1:-57278546 | Msa0030810:CDS |
| ATGATATTGAGGCATTAGAA+AGG | 0.558795 | 1_1:-57277756 | Msa0030810:CDS |
| AACGGATATTCCTTCTTCTG+GGG | 0.559930 | 1_1:+57281458 | None:intergenic |
| GTTGAAAAGGGCAACAAAGA+GGG | 0.561186 | 1_1:-57277599 | Msa0030810:CDS |
| TAACTCGGAATTCTTTGGTG+TGG | 0.564968 | 1_1:-57280106 | Msa0030810:CDS |
| ATTGAAAATGCTTGTTTGGG+TGG | 0.566174 | 1_1:-57281342 | Msa0030810:CDS |
| GTTTACGTGCATTCAAGCGA+TGG | 0.570568 | 1_1:-57281530 | Msa0030810:CDS |
| GTCTTCTAACAACGAATCTG+AGG | 0.572955 | 1_1:-57278681 | Msa0030810:CDS |
| CGGTTCTGCGTATCAGTGAA+AGG | 0.574157 | 1_1:-57277696 | Msa0030810:CDS |
| GGTTTGGAGTGTTGAAGAAG+TGG | 0.580380 | 1_1:-57281214 | Msa0030810:CDS |
| AATAGCCTAACCTTCTCCAA+AGG | 0.600517 | 1_1:+57278085 | None:intergenic |
| TGAAGTCCAATGGATTCGAA+TGG | 0.603454 | 1_1:-57281506 | Msa0030810:CDS |
| CTTCACTTACAGATCTGCCA+GGG | 0.605599 | 1_1:+57280005 | None:intergenic |
| AGATGTTAGCAGTGGAGCTG+AGG | 0.607643 | 1_1:-57278513 | Msa0030810:intron |
| AAAGGCAAACATTCCTGTTG+AGG | 0.608468 | 1_1:+57281237 | None:intergenic |
| GGGATACTCTTGATCTGCTG+TGG | 0.609125 | 1_1:+57278106 | None:intergenic |
| TGCCGGGAAGAAGTTGAAAA+GGG | 0.609205 | 1_1:-57277611 | Msa0030810:CDS |
| ATGATAAAAGATGTTAGCAG+TGG | 0.610343 | 1_1:-57278521 | Msa0030810:CDS |
| AAGCGATGGATGAAGTCCAA+TGG | 0.611498 | 1_1:-57281516 | Msa0030810:CDS |
| CTGTTGCTATTATGTATGAG+AGG | 0.614081 | 1_1:-57281305 | Msa0030810:CDS |
| GGAGTATTCTTCAATTACTG+AGG | 0.614549 | 1_1:-57278570 | Msa0030810:CDS |
| AGTTGAAAAGGGCAACAAAG+AGG | 0.617163 | 1_1:-57277600 | Msa0030810:CDS |
| ATTTGGAACTGGTACTTCAG+TGG | 0.622999 | 1_1:-57278152 | Msa0030810:CDS |
| AGCTGAAGATAACCCTCCCA+AGG | 0.629647 | 1_1:+57281264 | None:intergenic |
| ATACTCTTGATCTGCTGTGG+CGG | 0.640648 | 1_1:+57278109 | None:intergenic |
| TCTTCAACACTCCAAACCAA+AGG | 0.644717 | 1_1:+57281219 | None:intergenic |
| GCATTGTGTGAAATCAATGC+AGG | 0.646675 | 1_1:-57281432 | Msa0030810:CDS |
| TGAAATCAATGCAGGTGATG+TGG | 0.648395 | 1_1:-57281424 | Msa0030810:CDS |
| TTCGAGATAGATGATTACCA+TGG | 0.653774 | 1_1:-57280042 | Msa0030810:CDS |
| TGAAGGTTCTGAATCCAACA+GGG | 0.663792 | 1_1:+57280134 | None:intergenic |
| AAAATAAGGAGTTCAATCTG+TGG | 0.668743 | 1_1:+57278012 | None:intergenic |
| ATTCAATCATAAAACTGGTG+CGG | 0.668860 | 1_1:-57278726 | Msa0030810:CDS |
| GGGGAACCATGCCAAAACCA+TGG | 0.671012 | 1_1:+57280025 | None:intergenic |
| TTCGTTGTTAGAAGACAAAG+CGG | 0.673995 | 1_1:+57278688 | None:intergenic |
| TTCACTTACAGATCTGCCAG+GGG | 0.708708 | 1_1:+57280006 | None:intergenic |
| GAAGGTTCTGAATCCAACAG+GGG | 0.712164 | 1_1:+57280135 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTATGCATTATTG+AGG | - | chr1_1:57278074-57278093 | Msa0030810:CDS | 15.0% |
| !! | AAATTCAATAAAAAAAAAGC+AGG | + | chr1_1:57278512-57278531 | None:intergenic | 15.0% |
| !! | ATTATTAAACAATACATGTA+TGG | + | chr1_1:57279563-57279582 | None:intergenic | 15.0% |
| !! | AACATTTAAAAACTACAAAA+TGG | + | chr1_1:57280870-57280889 | None:intergenic | 15.0% |
| !! | AGATGATGTATAATAAAATA+AGG | + | chr1_1:57281233-57281252 | None:intergenic | 15.0% |
| !!! | AACTTTTGATAAGGAAAAAT+GGG | + | chr1_1:57277642-57277661 | None:intergenic | 20.0% |
| !!! | AAACTTTTGATAAGGAAAAA+TGG | + | chr1_1:57277643-57277662 | None:intergenic | 20.0% |
| !!! | TTTAGCATAAACTTTTGATA+AGG | + | chr1_1:57277651-57277670 | None:intergenic | 20.0% |
| !! | CATTATGAGAGATTTAAATT+TGG | - | chr1_1:57278103-57278122 | Msa0030810:CDS | 20.0% |
| !! | AGTAATAACTAGCAAATTAA+GGG | + | chr1_1:57279292-57279311 | None:intergenic | 20.0% |
| !! | AAGTAATAACTAGCAAATTA+AGG | + | chr1_1:57279293-57279312 | None:intergenic | 20.0% |
| !!! | AGTGTTTTTAACAATAACAA+TGG | + | chr1_1:57279332-57279351 | None:intergenic | 20.0% |
| !! | GTGTATATTATCATTTATCA+TGG | + | chr1_1:57279504-57279523 | None:intergenic | 20.0% |
| !! | TTATACATTTGATAAGAAGA+GGG | + | chr1_1:57279628-57279647 | None:intergenic | 20.0% |
| !! | ATATGTTATTAGATTGTCAA+TGG | - | chr1_1:57279761-57279780 | Msa0030810:intron | 20.0% |
| !!! | ATTTAAAGTGTTTGTATTCT+TGG | - | chr1_1:57279857-57279876 | Msa0030810:intron | 20.0% |
| !!! | TTTAAAGTGTTTGTATTCTT+GGG | - | chr1_1:57279858-57279877 | Msa0030810:intron | 20.0% |
| !!! | TTGAAGTCTTTTTAAGTTTA+AGG | - | chr1_1:57279993-57280012 | Msa0030810:intron | 20.0% |
| !!! | ACCAATTTTTTTTATGTATC+TGG | - | chr1_1:57280019-57280038 | Msa0030810:CDS | 20.0% |
| !! | TCCAGATACATAAAAAAAAT+TGG | + | chr1_1:57280023-57280042 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTAACTTCCAC+TGG | - | chr1_1:57280770-57280789 | Msa0030810:intron | 20.0% |
| !! | TATTAAATACCTGTATCAAA+TGG | + | chr1_1:57280972-57280991 | None:intergenic | 20.0% |
| !! | ATACAGGTATTTAATACTTA+CGG | - | chr1_1:57280976-57280995 | Msa0030810:intron | 20.0% |
| !!! | ATTATACATCATCTTTTTAC+CGG | - | chr1_1:57281239-57281258 | Msa0030810:CDS | 20.0% |
| !! | AATTTATTGTAAACATCATC+CGG | + | chr1_1:57281261-57281280 | None:intergenic | 20.0% |
| ! | ATCATTGAAAATGCTTGTTT+GGG | - | chr1_1:57277883-57277902 | Msa0030810:CDS | 25.0% |
| ! | GAGATTTAAATTTGGACTAA+TGG | - | chr1_1:57278111-57278130 | Msa0030810:CDS | 25.0% |
| !! | AAGAAAACTTTTAGTCTGTT+TGG | + | chr1_1:57278453-57278472 | None:intergenic | 25.0% |
| ! | GATATATACTTGTGTGAAAA+TGG | - | chr1_1:57278477-57278496 | Msa0030810:intron | 25.0% |
| ! | TCACAATTATATCCATTGAA+AGG | - | chr1_1:57278718-57278737 | Msa0030810:CDS | 25.0% |
| ! | CACAATTATATCCATTGAAA+GGG | - | chr1_1:57278719-57278738 | Msa0030810:CDS | 25.0% |
| ! | TCACAATTATATCCATTGAA+AGG | - | chr1_1:57278718-57278737 | Msa0030810:CDS | 25.0% |
| ! | CACAATTATATCCATTGAAA+GGG | - | chr1_1:57278719-57278738 | Msa0030810:CDS | 25.0% |
| !! | ATTTTTAAACTCCCTTTCAA+TGG | + | chr1_1:57278842-57278861 | None:intergenic | 25.0% |
| ! | TTGAAAGGGAGTTTAAAAAT+TGG | - | chr1_1:57278842-57278861 | Msa0030810:intron | 25.0% |
| !! | GATCAGAAAATTTTCACAAA+AGG | + | chr1_1:57279001-57279020 | None:intergenic | 25.0% |
| ! | GTAATAACTAGCAAATTAAG+GGG | + | chr1_1:57279291-57279310 | None:intergenic | 25.0% |
| ! | AATGATAATATACACTGTCT+TGG | - | chr1_1:57279509-57279528 | Msa0030810:intron | 25.0% |
| ! | GTTATACATTTGATAAGAAG+AGG | + | chr1_1:57279629-57279648 | None:intergenic | 25.0% |
| !!! | CGTTTCATTATGACATTTTT+TGG | - | chr1_1:57279711-57279730 | Msa0030810:intron | 25.0% |
| !!! | TTCATTATGACATTTTTTGG+AGG | - | chr1_1:57279714-57279733 | Msa0030810:intron | 25.0% |
| !!! | TCAATACGTTTTAAAACTAC+CGG | - | chr1_1:57279815-57279834 | Msa0030810:intron | 25.0% |
| !!! | AGTCTTATATGATGATTTTG+AGG | - | chr1_1:57279963-57279982 | Msa0030810:intron | 25.0% |
| ! | TAGGATTAAAAAAACTGCAA+TGG | - | chr1_1:57280067-57280086 | Msa0030810:CDS | 25.0% |
| !!! | GAATTGTTTTTAGTACTACT+CGG | + | chr1_1:57280124-57280143 | None:intergenic | 25.0% |
| ! | GAGTAGTACTAAAAACAATT+CGG | - | chr1_1:57280123-57280142 | Msa0030810:CDS | 25.0% |
| ! | AGTAGTACTAAAAACAATTC+GGG | - | chr1_1:57280124-57280143 | Msa0030810:CDS | 25.0% |
| ! | ATTCTTCTGTTCTTAATTGT+TGG | + | chr1_1:57280178-57280197 | None:intergenic | 25.0% |
| !!! | ATTTCTGTTCAGTTTTGATT+TGG | + | chr1_1:57280241-57280260 | None:intergenic | 25.0% |
| ! | ATAAAGGGAAATCAAAATAG+AGG | + | chr1_1:57280347-57280366 | None:intergenic | 25.0% |
| ! | TTAGAGGGGATATAAATAAA+GGG | + | chr1_1:57280362-57280381 | None:intergenic | 25.0% |
| ! | AGTTATATTAGTCAGTTAGA+GGG | + | chr1_1:57280377-57280396 | None:intergenic | 25.0% |
| ! | TAGTTATATTAGTCAGTTAG+AGG | + | chr1_1:57280378-57280397 | None:intergenic | 25.0% |
| ! | ACTGTTAGAATAAATCAGTA+GGG | + | chr1_1:57280431-57280450 | None:intergenic | 25.0% |
| ! | AAATAAATGTATGCTATCTG+AGG | + | chr1_1:57280835-57280854 | None:intergenic | 25.0% |
| !! | CATTATAGTTTTCTTTGACA+TGG | - | chr1_1:57280931-57280950 | Msa0030810:intron | 25.0% |
| ! | TACAGGTATTTAATACTTAC+GGG | - | chr1_1:57280977-57280996 | Msa0030810:intron | 25.0% |
| ! | ATTTAATACTTACGGGATAT+TGG | - | chr1_1:57280984-57281003 | Msa0030810:intron | 25.0% |
| ! | TTTAATACTTACGGGATATT+GGG | - | chr1_1:57280985-57281004 | Msa0030810:intron | 25.0% |
| ! | TATTTCGAGATATCATTTGA+TGG | - | chr1_1:57281189-57281208 | Msa0030810:CDS | 25.0% |
| ! | GATATCATCATTCAAAAAAG+TGG | + | chr1_1:57281334-57281353 | None:intergenic | 25.0% |
| ! | ATCAATAGAAGATGATATTG+AGG | - | chr1_1:57281461-57281480 | Msa0030810:CDS | 25.0% |
| !! | CATAATTTCTGAGTTTTTGA+AGG | + | chr1_1:57281563-57281582 | None:intergenic | 25.0% |
| GATTTCACACAATGCTTTAA+CGG | + | chr1_1:57277791-57277810 | None:intergenic | 30.0% | |
| ATTGTAAGACAAGCTTTCTT+TGG | + | chr1_1:57277841-57277860 | None:intergenic | 30.0% | |
| GATCATTGAAAATGCTTGTT+TGG | - | chr1_1:57277882-57277901 | Msa0030810:CDS | 30.0% | |
| TATTATGTATGAGAGGAGTT+TGG | - | chr1_1:57277930-57277949 | Msa0030810:CDS | 30.0% | |
| ATTATGTATGAGAGGAGTTT+GGG | - | chr1_1:57277931-57277950 | Msa0030810:CDS | 30.0% | |
| TGGAACTATGACAATGTAAT+AGG | - | chr1_1:57278131-57278150 | Msa0030810:CDS | 30.0% | |
| GGAACTATGACAATGTAATA+GGG | - | chr1_1:57278132-57278151 | Msa0030810:CDS | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | + | chr1_1:57278275-57278294 | None:intergenic | 30.0% | |
| ACTTCTATGATAAGCGTTTA+TGG | - | chr1_1:57278398-57278417 | Msa0030810:intron | 30.0% | |
| CGCATTAAACTAAACGTTAA+AGG | + | chr1_1:57278550-57278569 | None:intergenic | 30.0% | |
| TTCAAAATACGAAAGCTTCA+AGG | + | chr1_1:57278607-57278626 | None:intergenic | 30.0% | |
| AAAGTTAAACTCCCTTTCAA+TGG | + | chr1_1:57278733-57278752 | None:intergenic | 30.0% | |
| ! | TTTCACGACTCTTCTTTTTA+AGG | - | chr1_1:57278929-57278948 | Msa0030810:intron | 30.0% |
| TTCTGATCTCTTATCATTGT+AGG | - | chr1_1:57279013-57279032 | Msa0030810:intron | 30.0% | |
| ! | AGATAAAGCTTTTGTCTATG+AGG | - | chr1_1:57279050-57279069 | Msa0030810:intron | 30.0% |
| ! | TCGAGAAGAAATAAGACTTT+TGG | + | chr1_1:57279163-57279182 | None:intergenic | 30.0% |
| ! | ATAGATGATTACCATGGTTT+TGG | - | chr1_1:57279192-57279211 | Msa0030810:intron | 30.0% |
| TAATGACTTGAGTTCATCTA+TGG | + | chr1_1:57279358-57279377 | None:intergenic | 30.0% | |
| GAAGAATCTTCATGCATATT+TGG | + | chr1_1:57279415-57279434 | None:intergenic | 30.0% | |
| !! | TGTATGGACTAGTAAAACTA+TGG | + | chr1_1:57279547-57279566 | None:intergenic | 30.0% |
| CATTCAATAGATTACAACCT+TGG | + | chr1_1:57279741-57279760 | None:intergenic | 30.0% | |
| TATGATCAAGCTACGTTAAT+TGG | + | chr1_1:57279791-57279810 | None:intergenic | 30.0% | |
| TCCAACAAAATAGTATACAC+CGG | + | chr1_1:57279837-57279856 | None:intergenic | 30.0% | |
| TTCTTGGGATTTCAAGAAAA+AGG | - | chr1_1:57279873-57279892 | Msa0030810:intron | 30.0% | |
| GGATTTCAAGAAAAAGGTTA+TGG | - | chr1_1:57279879-57279898 | Msa0030810:intron | 30.0% | |
| ! | TAGCTTGCAATTAGTTATCT+TGG | - | chr1_1:57279916-57279935 | Msa0030810:intron | 30.0% |
| ! | AGTTATCTTGGTGGTTTAAA+TGG | - | chr1_1:57279928-57279947 | Msa0030810:intron | 30.0% |
| TGGTTTAAATGGAAGAACTA+AGG | - | chr1_1:57279939-57279958 | Msa0030810:intron | 30.0% | |
| ! | ATGTTGTATGTGGTTTGTAT+AGG | - | chr1_1:57280048-57280067 | Msa0030810:CDS | 30.0% |
| GTAGTACTAAAAACAATTCG+GGG | - | chr1_1:57280125-57280144 | Msa0030810:CDS | 30.0% | |
| GAGAAATAGAAAAAACAAGC+AGG | - | chr1_1:57280203-57280222 | Msa0030810:intron | 30.0% | |
| !!! | AGTTTTGATTTGGCGATAAA+AGG | + | chr1_1:57280231-57280250 | None:intergenic | 30.0% |
| ! | AAGATAAAACTTTTGCGAAG+AGG | + | chr1_1:57280291-57280310 | None:intergenic | 30.0% |
| GTTAGAGGGGATATAAATAA+AGG | + | chr1_1:57280363-57280382 | None:intergenic | 30.0% | |
| GTTATATTAGTCAGTTAGAG+GGG | + | chr1_1:57280376-57280395 | None:intergenic | 30.0% | |
| CACTGTTAGAATAAATCAGT+AGG | + | chr1_1:57280432-57280451 | None:intergenic | 30.0% | |
| !! | CTACTGATTTATTCTAACAG+TGG | - | chr1_1:57280430-57280449 | Msa0030810:intron | 30.0% |
| TCCAGATTCAATCATAAAAC+TGG | - | chr1_1:57280497-57280516 | Msa0030810:intron | 30.0% | |
| !! | ACCAGTTTTATGATTGAATC+TGG | + | chr1_1:57280501-57280520 | None:intergenic | 30.0% |
| ATTCAATCATAAAACTGGTG+CGG | - | chr1_1:57280502-57280521 | Msa0030810:intron | 30.0% | |
| !! | TTTCTCAGTTTTATCCATAG+AGG | + | chr1_1:57280621-57280640 | None:intergenic | 30.0% |
| TCTATGGATAAAACTGAGAA+AGG | - | chr1_1:57280620-57280639 | Msa0030810:intron | 30.0% | |
| ATGATAAAAGATGTTAGCAG+TGG | - | chr1_1:57280707-57280726 | Msa0030810:intron | 30.0% | |
| GTATCAAATGGAAGAATAAG+AGG | + | chr1_1:57280960-57280979 | None:intergenic | 30.0% | |
| CTTATTCTTCCATTTGATAC+AGG | - | chr1_1:57280960-57280979 | Msa0030810:intron | 30.0% | |
| ATCAATGTTCACGATATCAT+AGG | + | chr1_1:57281058-57281077 | None:intergenic | 30.0% | |
| ! | TGATATCGTGAACATTGATT+TGG | - | chr1_1:57281059-57281078 | Msa0030810:intron | 30.0% |
| ! | CTCGAAATATTCAGAGTTTT+CGG | + | chr1_1:57281178-57281197 | None:intergenic | 30.0% |
| AAAATAAGGAGTTCAATCTG+TGG | + | chr1_1:57281219-57281238 | None:intergenic | 30.0% | |
| ! | CAAAGCATCACAAATTTCTT+TGG | + | chr1_1:57281400-57281419 | None:intergenic | 30.0% |
| ! | ATGATATTGAGGCATTAGAA+AGG | - | chr1_1:57281472-57281491 | Msa0030810:CDS | 30.0% |
| TAGAAAGCTGTATCATTCTT+CGG | - | chr1_1:57281512-57281531 | Msa0030810:CDS | 30.0% | |
| !! | TGATAAGGAAAAATGGGTTG+TGG | + | chr1_1:57277636-57277655 | None:intergenic | 35.0% |
| ! | TAACGGATATTCCTTCTTCT+GGG | + | chr1_1:57277774-57277793 | None:intergenic | 35.0% |
| ! | TTAACGGATATTCCTTCTTC+TGG | + | chr1_1:57277775-57277794 | None:intergenic | 35.0% |
| ATTGAAAATGCTTGTTTGGG+TGG | - | chr1_1:57277886-57277905 | Msa0030810:CDS | 35.0% | |
| ! | CTGTTGCTATTATGTATGAG+AGG | - | chr1_1:57277923-57277942 | Msa0030810:CDS | 35.0% |
| ! | TGTTTGTTGATTGCGAGTAA+AGG | - | chr1_1:57278158-57278177 | Msa0030810:CDS | 35.0% |
| ! | GTTTGTTGATTGCGAGTAAA+GGG | - | chr1_1:57278159-57278178 | Msa0030810:CDS | 35.0% |
| GACATAAACATTTGTGAGAC+TGG | - | chr1_1:57278215-57278234 | Msa0030810:CDS | 35.0% | |
| TTTAGAGAGCTTATGGAAAC+AGG | - | chr1_1:57278238-57278257 | Msa0030810:CDS | 35.0% | |
| ATTCACATTTCAATGAACCC+CGG | + | chr1_1:57278679-57278698 | None:intergenic | 35.0% | |
| ATTCACATTTCAATGAACCC+CGG | + | chr1_1:57278679-57278698 | None:intergenic | 35.0% | |
| AAAAATTGGCAGAAGAGACA+AGG | - | chr1_1:57278856-57278875 | Msa0030810:intron | 35.0% | |
| AGAACCTTCAAAGCTTAACT+CGG | - | chr1_1:57279107-57279126 | Msa0030810:intron | 35.0% | |
| ! | AATTCCGAGTTAAGCTTTGA+AGG | + | chr1_1:57279114-57279133 | None:intergenic | 35.0% |
| AAGCTTAACTCGGAATTCTT+TGG | - | chr1_1:57279117-57279136 | Msa0030810:intron | 35.0% | |
| TTCGAGATAGATGATTACCA+TGG | - | chr1_1:57279186-57279205 | Msa0030810:intron | 35.0% | |
| ! | CCATTCAGAATCCTTTTCTT+CGG | - | chr1_1:57279465-57279484 | Msa0030810:intron | 35.0% |
| ! | ATTTGTTCTTTTGCAGTTGC+AGG | + | chr1_1:57279687-57279706 | None:intergenic | 35.0% |
| ! | ACCGGTGTATACTATTTTGT+TGG | - | chr1_1:57279833-57279852 | Msa0030810:intron | 35.0% |
| CTTGCAATTAGTTATCTTGG+TGG | - | chr1_1:57279919-57279938 | Msa0030810:intron | 35.0% | |
| AAATCAGTAGGGCAGAATAA+GGG | + | chr1_1:57280420-57280439 | None:intergenic | 35.0% | |
| TAAATCAGTAGGGCAGAATA+AGG | + | chr1_1:57280421-57280440 | None:intergenic | 35.0% | |
| TTCGTTGTTAGAAGACAAAG+CGG | + | chr1_1:57280543-57280562 | None:intergenic | 35.0% | |
| ACTAGCTCAAAATTCCTCTA+TGG | - | chr1_1:57280604-57280623 | Msa0030810:intron | 35.0% | |
| ! | GGAGTATTCTTCAATTACTG+AGG | - | chr1_1:57280658-57280677 | Msa0030810:intron | 35.0% |
| ! | TGAAGTCCAATGGATTCGAA+TGG | - | chr1_1:57277722-57277741 | Msa0030810:CDS | 40.0% |
| GAGCAACACATTGCAATTTG+TGG | - | chr1_1:57277744-57277763 | Msa0030810:CDS | 40.0% | |
| AACGGATATTCCTTCTTCTG+GGG | + | chr1_1:57277773-57277792 | None:intergenic | 40.0% | |
| GCATTGTGTGAAATCAATGC+AGG | - | chr1_1:57277796-57277815 | Msa0030810:CDS | 40.0% | |
| TGAAATCAATGCAGGTGATG+TGG | - | chr1_1:57277804-57277823 | Msa0030810:CDS | 40.0% | |
| TGCTTGTTTGGGTGGTTATT+TGG | - | chr1_1:57277894-57277913 | Msa0030810:CDS | 40.0% | |
| GCTTGTTTGGGTGGTTATTT+GGG | - | chr1_1:57277895-57277914 | Msa0030810:CDS | 40.0% | |
| AAAGGCAAACATTCCTGTTG+AGG | + | chr1_1:57277994-57278013 | None:intergenic | 40.0% | |
| TCAACAGGAATGTTTGCCTT+TGG | - | chr1_1:57277993-57278012 | Msa0030810:CDS | 40.0% | |
| AGGAATGTTTGCCTTTGGTT+TGG | - | chr1_1:57277998-57278017 | Msa0030810:CDS | 40.0% | |
| TCTTCAACACTCCAAACCAA+AGG | + | chr1_1:57278012-57278031 | None:intergenic | 40.0% | |
| GAGTAAAGGGTTGTTTGTGT+TGG | - | chr1_1:57278172-57278191 | Msa0030810:CDS | 40.0% | |
| !! | AGACTGGTTTAGAGAGCTTA+TGG | - | chr1_1:57278231-57278250 | Msa0030810:CDS | 40.0% |
| TTCACATTTCAATGAACCCC+GGG | + | chr1_1:57278678-57278697 | None:intergenic | 40.0% | |
| TTCACATTTCAATGAACCCC+GGG | + | chr1_1:57278678-57278697 | None:intergenic | 40.0% | |
| ! | AAGCTTTTGTCTATGAGGAC+TGG | - | chr1_1:57279055-57279074 | Msa0030810:intron | 40.0% |
| AGAGAATATTCTACCCCTGT+TGG | - | chr1_1:57279080-57279099 | Msa0030810:intron | 40.0% | |
| !! | TGAAGGTTCTGAATCCAACA+GGG | + | chr1_1:57279097-57279116 | None:intergenic | 40.0% |
| !! | TTGAAGGTTCTGAATCCAAC+AGG | + | chr1_1:57279098-57279117 | None:intergenic | 40.0% |
| TAACTCGGAATTCTTTGGTG+TGG | - | chr1_1:57279122-57279141 | Msa0030810:intron | 40.0% | |
| !!! | TGATTACCATGGTTTTGGCA+TGG | - | chr1_1:57279197-57279216 | Msa0030810:intron | 40.0% |
| AGAACCATAGTAATCACCAG+AGG | + | chr1_1:57279249-57279268 | None:intergenic | 40.0% | |
| CCGAAGAAAAGGATTCTGAA+TGG | + | chr1_1:57279468-57279487 | None:intergenic | 40.0% | |
| CTCTTACTTCTCCGAAGAAA+AGG | + | chr1_1:57279479-57279498 | None:intergenic | 40.0% | |
| !!! | TGACATTTTTTGGAGGTCCA+AGG | - | chr1_1:57279721-57279740 | Msa0030810:intron | 40.0% |
| CTGGAAAGCAATGTTGTATG+TGG | - | chr1_1:57280038-57280057 | Msa0030810:CDS | 40.0% | |
| TTAGTACTACTCGGTCAGAT+TGG | + | chr1_1:57280115-57280134 | None:intergenic | 40.0% | |
| TGAGAATAGAATTCTCCCCA+AGG | - | chr1_1:57280261-57280280 | Msa0030810:intron | 40.0% | |
| GAGAATAGAATTCTCCCCAA+GGG | - | chr1_1:57280262-57280281 | Msa0030810:intron | 40.0% | |
| TCTGGAGAAGACAGTGTTAT+AGG | + | chr1_1:57280483-57280502 | None:intergenic | 40.0% | |
| GTCTTCTAACAACGAATCTG+AGG | - | chr1_1:57280547-57280566 | Msa0030810:intron | 40.0% | |
| TGAGGATGATACTTCAATGC+TGG | - | chr1_1:57280676-57280695 | Msa0030810:intron | 40.0% | |
| TGATACTTCAATGCTGGAGA+TGG | - | chr1_1:57280682-57280701 | Msa0030810:intron | 40.0% | |
| AACACAGACACGTAGATGAA+AGG | + | chr1_1:57280751-57280770 | None:intergenic | 40.0% | |
| AAGAGTAGAAGAGTGACTAC+TGG | + | chr1_1:57280902-57280921 | None:intergenic | 40.0% | |
| ! | GCTGCTTTGCTACATAGATA+TGG | - | chr1_1:57281012-57281031 | Msa0030810:intron | 40.0% |
| !! | CGTGAACATTGATTTGGAAC+TGG | - | chr1_1:57281065-57281084 | Msa0030810:intron | 40.0% |
| ! | ATTTGGAACTGGTACTTCAG+TGG | - | chr1_1:57281076-57281095 | Msa0030810:intron | 40.0% |
| ATAGCCTAACCTTCTCCAAA+GGG | + | chr1_1:57281145-57281164 | None:intergenic | 40.0% | |
| AATAGCCTAACCTTCTCCAA+AGG | + | chr1_1:57281146-57281165 | None:intergenic | 40.0% | |
| ! | TTGTGATGCTTTGTTGTCAC+TGG | - | chr1_1:57281407-57281426 | Msa0030810:CDS | 40.0% |
| AGTTGAAAAGGGCAACAAAG+AGG | - | chr1_1:57281628-57281647 | Msa0030810:intron | 40.0% | |
| GTTGAAAAGGGCAACAAAGA+GGG | - | chr1_1:57281629-57281648 | Msa0030810:intron | 40.0% | |
| GAGGTGTAAACATGCATACC+TGG | + | chr1_1:57277601-57277620 | None:intergenic | 45.0% | |
| GTTTACGTGCATTCAAGCGA+TGG | - | chr1_1:57277698-57277717 | Msa0030810:CDS | 45.0% | |
| AAGCGATGGATGAAGTCCAA+TGG | - | chr1_1:57277712-57277731 | Msa0030810:CDS | 45.0% | |
| GTTGCTCCATTCGAATCCAT+TGG | + | chr1_1:57277731-57277750 | None:intergenic | 45.0% | |
| ! | TCTTCAGCTTTTGCCTCAAC+AGG | - | chr1_1:57277978-57277997 | Msa0030810:CDS | 45.0% |
| !! | GGTTTGGAGTGTTGAAGAAG+TGG | - | chr1_1:57278014-57278033 | Msa0030810:CDS | 45.0% |
| !! | TGCTCTTCATTTGCTATGCC+CGG | - | chr1_1:57278657-57278676 | Msa0030810:CDS | 45.0% |
| !! | TGCTCTTCATTTGCTATGCC+CGG | - | chr1_1:57278657-57278676 | Msa0030810:CDS | 45.0% |
| !! | GAAGGTTCTGAATCCAACAG+GGG | + | chr1_1:57279096-57279115 | None:intergenic | 45.0% |
| TTCACTTACAGATCTGCCAG+GGG | + | chr1_1:57279225-57279244 | None:intergenic | 45.0% | |
| CTTCACTTACAGATCTGCCA+GGG | + | chr1_1:57279226-57279245 | None:intergenic | 45.0% | |
| AGATCTGTAAGTGAAGCCTC+TGG | - | chr1_1:57279230-57279249 | Msa0030810:intron | 45.0% | |
| GAAGCCTCTGGTGATTACTA+TGG | - | chr1_1:57279242-57279261 | Msa0030810:intron | 45.0% | |
| CTTGCAGCACATGGTTATCA+AGG | + | chr1_1:57279664-57279683 | None:intergenic | 45.0% | |
| TTTGCGAAGAGGAAACCCTT+GGG | + | chr1_1:57280280-57280299 | None:intergenic | 45.0% | |
| ! | TTTTGCGAAGAGGAAACCCT+TGG | + | chr1_1:57280281-57280300 | None:intergenic | 45.0% |
| !! | GAAAGGCGTTGATAGCGAAA+TGG | - | chr1_1:57280637-57280656 | Msa0030810:intron | 45.0% |
| GACTGATCATCACTTTCCAG+TGG | + | chr1_1:57280789-57280808 | None:intergenic | 45.0% | |
| ATACTCTTGATCTGCTGTGG+CGG | + | chr1_1:57281122-57281141 | None:intergenic | 45.0% | |
| !! | GCAGATCAAGAGTATCCCTT+TGG | - | chr1_1:57281127-57281146 | Msa0030810:intron | 45.0% |
| !! | CAAGAGTATCCCTTTGGAGA+AGG | - | chr1_1:57281133-57281152 | Msa0030810:intron | 45.0% |
| ! | GTATCCCTTTGGAGAAGGTT+AGG | - | chr1_1:57281138-57281157 | Msa0030810:intron | 45.0% |
| !!! | TTCAGAGTTTTCGGTGTCAC+TGG | + | chr1_1:57281169-57281188 | None:intergenic | 45.0% |
| ! | TGTTGTCACTGGCTGATATG+AGG | - | chr1_1:57281418-57281437 | Msa0030810:CDS | 45.0% |
| ! | GTTGTCACTGGCTGATATGA+GGG | - | chr1_1:57281419-57281438 | Msa0030810:CDS | 45.0% |
| GATATGAGGGAGAGTCTCTA+TGG | - | chr1_1:57281432-57281451 | Msa0030810:CDS | 45.0% | |
| !! | ATTACCAATCCTAGCTCTGC+CGG | - | chr1_1:57281600-57281619 | Msa0030810:intron | 45.0% |
| TGCCGGGAAGAAGTTGAAAA+GGG | - | chr1_1:57281617-57281636 | Msa0030810:intron | 45.0% | |
| ! | TGCCCTTTTCAACTTCTTCC+CGG | + | chr1_1:57281622-57281641 | None:intergenic | 45.0% |
| !! | AATAATAATAATAATAATTG+TGG | - | chr1_1:57279580-57279599 | Msa0030810:intron | 5.0% |
| GTTGTGGCGAAAATCGAGAG+AGG | + | chr1_1:57277620-57277639 | None:intergenic | 50.0% | |
| TTTGTGGACACCCCAGAAGA+AGG | - | chr1_1:57277760-57277779 | Msa0030810:CDS | 50.0% | |
| GTATGAGAGGAGTTTGGGTG+AGG | - | chr1_1:57277936-57277955 | Msa0030810:CDS | 50.0% | |
| TTTGGGTGAGGAGTCTCCTT+GGG | - | chr1_1:57277948-57277967 | Msa0030810:CDS | 50.0% | |
| AGCTGAAGATAACCCTCCCA+AGG | + | chr1_1:57277967-57277986 | None:intergenic | 50.0% | |
| ! | GAAGTGGACCAGCTTTTGTG+TGG | - | chr1_1:57278030-57278049 | Msa0030810:CDS | 50.0% |
| GCTCAGTACCACACAAAAGC+TGG | + | chr1_1:57278041-57278060 | None:intergenic | 50.0% | |
| ! | GTGTGGTACTGAGCTTCATC+AGG | - | chr1_1:57278047-57278066 | Msa0030810:CDS | 50.0% |
| !! | GCTCTTCATTTGCTATGCCC+GGG | - | chr1_1:57278658-57278677 | Msa0030810:CDS | 50.0% |
| !! | CTCTTCATTTGCTATGCCCG+GGG | - | chr1_1:57278659-57278678 | Msa0030810:CDS | 50.0% |
| !! | GCTCTTCATTTGCTATGCCC+GGG | - | chr1_1:57278658-57278677 | Msa0030810:CDS | 50.0% |
| !! | CTCTTCATTTGCTATGCCCG+GGG | - | chr1_1:57278659-57278678 | Msa0030810:CDS | 50.0% |
| GCTTCACTTACAGATCTGCC+AGG | + | chr1_1:57279227-57279246 | None:intergenic | 50.0% | |
| TTGCGAAGAGGAAACCCTTG+GGG | + | chr1_1:57280279-57280298 | None:intergenic | 50.0% | |
| AGATGTTAGCAGTGGAGCTG+AGG | - | chr1_1:57280715-57280734 | Msa0030810:intron | 50.0% | |
| GGGATACTCTTGATCTGCTG+TGG | + | chr1_1:57281125-57281144 | None:intergenic | 50.0% | |
| CGGTTCTGCGTATCAGTGAA+AGG | - | chr1_1:57281532-57281551 | Msa0030810:CDS | 50.0% | |
| !! | TTACCAATCCTAGCTCTGCC+GGG | - | chr1_1:57281601-57281620 | Msa0030810:intron | 50.0% |
| CTGCCGGGAAGAAGTTGAAA+AGG | - | chr1_1:57281616-57281635 | Msa0030810:intron | 50.0% | |
| GTTTGGGTGAGGAGTCTCCT+TGG | - | chr1_1:57277947-57277966 | Msa0030810:CDS | 55.0% | |
| GGGGAACCATGCCAAAACCA+TGG | + | chr1_1:57279206-57279225 | None:intergenic | 55.0% | |
| !!! | TGGTTTTGGCATGGTTCCCC+TGG | - | chr1_1:57279206-57279225 | Msa0030810:intron | 55.0% |
| AGTTGCAGGCTTGCAGCACA+TGG | + | chr1_1:57279673-57279692 | None:intergenic | 55.0% | |
| TCTTGATCTGCTGTGGCGGT+TGG | + | chr1_1:57281118-57281137 | None:intergenic | 55.0% | |
| AACTTCTTCCCGGCAGAGCT+AGG | + | chr1_1:57281612-57281631 | None:intergenic | 55.0% | |
| GGTGAGGAGTCTCCTTGGGA+GGG | - | chr1_1:57277952-57277971 | Msa0030810:CDS | 60.0% | |
| CTTCCCGGCAGAGCTAGGAT+TGG | + | chr1_1:57281607-57281626 | None:intergenic | 60.0% | |
| GGGTGAGGAGTCTCCTTGGG+AGG | - | chr1_1:57277951-57277970 | Msa0030810:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 57277591 | 57281659 | 57277591 | ID=Msa0030810;Name=Msa0030810 |
| chr1_1 | mRNA | 57277591 | 57281659 | 57277591 | ID=Msa0030810-mRNA-1;Parent=Msa0030810;Name=Msa0030810-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.25|0.2|0.8|1|1|5|0|497 |
| chr1_1 | exon | 57281649 | 57281659 | 57281649 | ID=Msa0030810-mRNA-1:exon:17269;Parent=Msa0030810-mRNA-1 |
| chr1_1 | exon | 57281182 | 57281554 | 57281182 | ID=Msa0030810-mRNA-1:exon:17268;Parent=Msa0030810-mRNA-1 |
| chr1_1 | exon | 57280015 | 57280211 | 57280015 | ID=Msa0030810-mRNA-1:exon:17267;Parent=Msa0030810-mRNA-1 |
| chr1_1 | exon | 57278514 | 57278748 | 57278514 | ID=Msa0030810-mRNA-1:exon:17266;Parent=Msa0030810-mRNA-1 |
| chr1_1 | exon | 57277591 | 57278268 | 57277591 | ID=Msa0030810-mRNA-1:exon:17265;Parent=Msa0030810-mRNA-1 |
| chr1_1 | CDS | 57281649 | 57281659 | 57281649 | ID=Msa0030810-mRNA-1:cds;Parent=Msa0030810-mRNA-1 |
| chr1_1 | CDS | 57281182 | 57281554 | 57281182 | ID=Msa0030810-mRNA-1:cds;Parent=Msa0030810-mRNA-1 |
| chr1_1 | CDS | 57280015 | 57280211 | 57280015 | ID=Msa0030810-mRNA-1:cds;Parent=Msa0030810-mRNA-1 |
| chr1_1 | CDS | 57278514 | 57278748 | 57278514 | ID=Msa0030810-mRNA-1:cds;Parent=Msa0030810-mRNA-1 |
| chr1_1 | CDS | 57277591 | 57278268 | 57277591 | ID=Msa0030810-mRNA-1:cds;Parent=Msa0030810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
