Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0031150 | sp|Q9FHY8|HLB1_ARATH | 61.121 | 553 | 131 | 12 | 5 | 478 | 18 | 565 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0031150 | A0A072VLP9 | 90.385 | 520 | 8 | 1 | 1 | 478 | 1 | 520 | 0.0 | 952 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031150 | Msa0171090 | 0.841019 | 6.124867e-58 | -8.615850e-47 |
| Msa0031150 | Msa0428210 | 0.857249 | 1.855823e-62 | -8.615850e-47 |
| Msa0031150 | Msa0519150 | 0.813165 | 2.939094e-51 | -8.615850e-47 |
| Msa0031150 | Msa0586450 | 0.812910 | 3.341952e-51 | -8.615850e-47 |
| Msa0031150 | Msa1055200 | 0.812780 | 3.567904e-51 | -8.615850e-47 |
| Msa0031150 | Msa1140410 | 0.801081 | 1.065182e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0031150 | MtrunA17_Chr1g0189021 | 90.385 | 520 | 8 | 1 | 1 | 478 | 1 | 520 | 0.0 | 952 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0031150 | AT5G41950.1 | 61.121 | 553 | 131 | 12 | 5 | 478 | 18 | 565 | 0.0 | 618 |
Find 139 sgRNAs with CRISPR-Local
Find 592 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGTTCTGGTTCGGTTTC+TGG | 0.053405 | 1_1:+57758373 | None:intergenic |
| TGTACTTGTTCTTGTGATTC+TGG | 0.181604 | 1_1:+57758352 | None:intergenic |
| TCGTGATTCGATTTGGATTC+TGG | 0.191653 | 1_1:+57758409 | None:intergenic |
| TTAACCCAAATATGAATTAT+TGG | 0.194575 | 1_1:+57749910 | None:intergenic |
| AGATTCTGGTTCAGACATTT+TGG | 0.197543 | 1_1:+57758486 | None:intergenic |
| GAGCTAACATCTTCTCTTTC+GGG | 0.200894 | 1_1:+57758139 | None:intergenic |
| CGGTTAAATATCCAACTTTA+AGG | 0.206145 | 1_1:+57751265 | None:intergenic |
| TATTTCAGGCGCTTAATAAC+TGG | 0.247515 | 1_1:-57754088 | Msa0031150:intron |
| CTCAATTTGACAGACCAAAT+TGG | 0.255916 | 1_1:+57750067 | None:intergenic |
| TGTTAATTGTATTACCAATT+TGG | 0.257312 | 1_1:-57750081 | Msa0031150:three_prime_UTR |
| TCTTGTGATTCTGGTTGTTC+TGG | 0.283706 | 1_1:+57758361 | None:intergenic |
| CACCGGGCAATTTACAATCT+TGG | 0.286151 | 1_1:-57751909 | Msa0031150:CDS |
| TACAGTGCATCATAATCTTC+AGG | 0.287071 | 1_1:+57757020 | None:intergenic |
| AAGATGTTAGCTCTCCTTAC+AGG | 0.291498 | 1_1:-57758129 | Msa0031150:intron |
| TTCGATTTGGATTCTGGTTC+GGG | 0.300423 | 1_1:+57758415 | None:intergenic |
| TTTGCCAATAATTCATATTT+GGG | 0.312561 | 1_1:-57749914 | Msa0031150:three_prime_UTR |
| ATCAGGTTCGTGATTCGATT+TGG | 0.335445 | 1_1:+57758402 | None:intergenic |
| AGAGCTAACATCTTCTCTTT+CGG | 0.335566 | 1_1:+57758138 | None:intergenic |
| TAACTGGGGACTTGCGCTTC+AGG | 0.345281 | 1_1:-57754072 | Msa0031150:intron |
| TCTGCATCGTTGTTAACTTC+TGG | 0.345818 | 1_1:+57758298 | None:intergenic |
| TGCTGACTCTTGGGAATCAT+TGG | 0.349651 | 1_1:-57750199 | Msa0031150:CDS |
| GTACAACTGGAACCGGAATC+TGG | 0.351097 | 1_1:-57758334 | Msa0031150:CDS |
| TTACAATCTTGGAACTGTTC+TGG | 0.353539 | 1_1:-57751898 | Msa0031150:intron |
| TCGGTTTCTGGTTGAGGATC+AGG | 0.353910 | 1_1:+57758385 | None:intergenic |
| CTGACTTTGCCTCCTGGTGC+TGG | 0.356759 | 1_1:-57750897 | Msa0031150:CDS |
| ATTATGATGCACTGTACAAT+TGG | 0.360131 | 1_1:-57757013 | Msa0031150:CDS |
| GATTGGCTGTACAATTCATT+TGG | 0.366257 | 1_1:+57751695 | None:intergenic |
| CAATTGGGCATTGGTACTTC+AGG | 0.369935 | 1_1:-57756997 | Msa0031150:intron |
| ATTCGATTTGGATTCTGGTT+CGG | 0.373895 | 1_1:+57758414 | None:intergenic |
| TGGCTTCTTACTGAATAGTT+TGG | 0.382141 | 1_1:+57751638 | None:intergenic |
| CTGAGGATGCGGTGAAGAAT+TGG | 0.382580 | 1_1:+57758234 | None:intergenic |
| TTAGAAGGTGAAGTGGAATC+TGG | 0.383082 | 1_1:+57755520 | None:intergenic |
| ATTGGTACCAACGACTTCAT+TGG | 0.388352 | 1_1:+57758252 | None:intergenic |
| AGTTCGCAGAGAAGTGTAAA+AGG | 0.389236 | 1_1:+57750027 | None:intergenic |
| ACCATGAGAGAATTGCTTCA+TGG | 0.392969 | 1_1:-57758181 | Msa0031150:CDS |
| CCGTCCTGAGATTGTGGTTC+GGG | 0.393515 | 1_1:+57758442 | None:intergenic |
| AATCCACGACATTTAATAGA+TGG | 0.401089 | 1_1:+57749936 | None:intergenic |
| GCAGAGGACACTTTAAGAAC+AGG | 0.403120 | 1_1:-57751746 | Msa0031150:CDS |
| TGCTTGCCTCTGTTCAACTC+TGG | 0.404309 | 1_1:+57751022 | None:intergenic |
| TTAACAAGGTTGCTGACTCT+TGG | 0.404318 | 1_1:-57750209 | Msa0031150:intron |
| ATCACAAGAACAAGTACAAC+TGG | 0.406670 | 1_1:-57758347 | Msa0031150:CDS |
| CTTGCGGTTGGTACGATCTA+TGG | 0.407275 | 1_1:-57751420 | Msa0031150:intron |
| TTAAAGCAGTCCAACTCAAC+TGG | 0.408233 | 1_1:-57754324 | Msa0031150:CDS |
| GTATCCAGGCTTACTACAAT+TGG | 0.408555 | 1_1:-57754660 | Msa0031150:intron |
| ATTCATGGCATCTCCTGATC+TGG | 0.410632 | 1_1:+57750983 | None:intergenic |
| TGATTCTGGTTGTTCTGGTT+CGG | 0.411227 | 1_1:+57758366 | None:intergenic |
| TCAAGCAGAGCATCTTTAGA+AGG | 0.411824 | 1_1:+57755505 | None:intergenic |
| TCTGGTTCGGTTTCTGGTTG+AGG | 0.412637 | 1_1:+57758379 | None:intergenic |
| CAAAGTCTCTCAACCAGATC+AGG | 0.413385 | 1_1:-57750996 | Msa0031150:CDS |
| TAACAAGGTTGCTGACTCTT+GGG | 0.418251 | 1_1:-57750208 | Msa0031150:intron |
| CTCTGCATTGATACAGTTCA+TGG | 0.422436 | 1_1:-57750873 | Msa0031150:CDS |
| TTCTTCGTTCAGCATTGCAT+TGG | 0.424964 | 1_1:-57758603 | Msa0031150:five_prime_UTR |
| AGCTGAAGAGCTATGGAAAC+AGG | 0.425760 | 1_1:-57754590 | Msa0031150:intron |
| GTATTGGCGGGTATTATAAC+AGG | 0.435968 | 1_1:-57750117 | Msa0031150:CDS |
| CCGCTACCACACCTTAAAGT+TGG | 0.441526 | 1_1:-57751276 | Msa0031150:CDS |
| GATCAGGAGATGCCATGAAT+GGG | 0.443681 | 1_1:-57750980 | Msa0031150:CDS |
| ATCGTTGTTAACTTCTGGAT+CGG | 0.445981 | 1_1:+57758303 | None:intergenic |
| TGAGATTGTGGTTCGGGTGA+TGG | 0.446870 | 1_1:+57758448 | None:intergenic |
| GGAATCATTGGATGGATGGC+TGG | 0.453718 | 1_1:-57750187 | Msa0031150:CDS |
| AGATCAGGAGATGCCATGAA+TGG | 0.456962 | 1_1:-57750981 | Msa0031150:CDS |
| GCTGATCTGACTTTGCCTCC+TGG | 0.458062 | 1_1:-57750903 | Msa0031150:CDS |
| TATTTAACCGCACCTCCTGC+GGG | 0.458286 | 1_1:-57751252 | Msa0031150:CDS |
| TCGTTGTTAACTTCTGGATC+GGG | 0.458987 | 1_1:+57758304 | None:intergenic |
| TGGAATGATGAATTGGGGAG+AGG | 0.463462 | 1_1:+57758522 | None:intergenic |
| GATCGTTTCCAGTCATTATG+AGG | 0.464366 | 1_1:+57751216 | None:intergenic |
| TCCGTCCTGAGATTGTGGTT+CGG | 0.464441 | 1_1:+57758441 | None:intergenic |
| AGTTCATGGATCAGTTTACT+TGG | 0.466595 | 1_1:-57750859 | Msa0031150:intron |
| AGAACAAGTACAACTGGAAC+CGG | 0.477279 | 1_1:-57758341 | Msa0031150:CDS |
| ACTCAACTGGAACAGTCCTC+AGG | 0.484214 | 1_1:-57754311 | Msa0031150:intron |
| ATGATGAATTGGGGAGAGGA+AGG | 0.488948 | 1_1:+57758526 | None:intergenic |
| AGTTGCAATTTGATTTCCAC+CGG | 0.493039 | 1_1:-57751926 | Msa0031150:CDS |
| ATCACCCGAACCACAATCTC+AGG | 0.495672 | 1_1:-57758446 | Msa0031150:CDS |
| ATATTTAACCGCACCTCCTG+CGG | 0.501162 | 1_1:-57751253 | Msa0031150:CDS |
| GCTTGCCTCTGTTCAACTCT+GGG | 0.504813 | 1_1:+57751023 | None:intergenic |
| CAAAGGAAGCTGAAGAGCTA+TGG | 0.504826 | 1_1:-57754597 | Msa0031150:CDS |
| TGTGGTTCGGGTGATGGTTG+AGG | 0.504894 | 1_1:+57758454 | None:intergenic |
| GGATCACGAAAAGCTTCAGC+AGG | 0.507858 | 1_1:-57751181 | Msa0031150:intron |
| CTTGGGAATCATTGGATGGA+TGG | 0.512023 | 1_1:-57750191 | Msa0031150:CDS |
| CTGCAATATATATTGCAGAT+TGG | 0.512331 | 1_1:+57751678 | None:intergenic |
| ACAGTGCATCATAATCTTCA+GGG | 0.517083 | 1_1:+57757021 | None:intergenic |
| TTCCAAGATTGTAAATTGCC+CGG | 0.521530 | 1_1:+57751907 | None:intergenic |
| GAGGACTGTTCCAGTTGAGT+TGG | 0.523242 | 1_1:+57754314 | None:intergenic |
| GAAATCAAATTGCAACTGTA+TGG | 0.525917 | 1_1:+57751932 | None:intergenic |
| GGTGCTCCGTCCTGAGATTG+TGG | 0.526798 | 1_1:+57758436 | None:intergenic |
| TATCCAGGCTTACTACAATT+GGG | 0.527161 | 1_1:-57754659 | Msa0031150:intron |
| ATTTCAGGCGCTTAATAACT+GGG | 0.531527 | 1_1:-57754087 | Msa0031150:intron |
| GGTTCAGAGGAAAACCTGTA+AGG | 0.539595 | 1_1:+57758115 | None:intergenic |
| TTATGATGCACTGTACAATT+GGG | 0.539658 | 1_1:-57757012 | Msa0031150:CDS |
| TAGCCATCTATTAAATGTCG+TGG | 0.545540 | 1_1:-57749939 | Msa0031150:three_prime_UTR |
| GACTCTTGGGAATCATTGGA+TGG | 0.547060 | 1_1:-57750195 | Msa0031150:CDS |
| TAGTTGCACCTCATAATGAC+TGG | 0.549693 | 1_1:-57751224 | Msa0031150:CDS |
| CAGAGGACACTTTAAGAACA+GGG | 0.561148 | 1_1:-57751745 | Msa0031150:CDS |
| GCGAGGCAAAAGTGATGTAT+TGG | 0.562011 | 1_1:-57750133 | Msa0031150:CDS |
| GGCAAAAGTGATGTATTGGC+GGG | 0.563534 | 1_1:-57750129 | Msa0031150:CDS |
| TTCTAAAGATGCTCTGCTTG+AGG | 0.564390 | 1_1:-57755503 | Msa0031150:CDS |
| ATTGCAACTGTATGGCTGAA+CGG | 0.567248 | 1_1:+57751940 | None:intergenic |
| AGGCAAAAGTGATGTATTGG+CGG | 0.568848 | 1_1:-57750130 | Msa0031150:CDS |
| GCTCTTCAGCTTCCTTTGTG+CGG | 0.573547 | 1_1:+57754602 | None:intergenic |
| AGCATCTTTAGAAGGTGAAG+TGG | 0.579092 | 1_1:+57755513 | None:intergenic |
| GTCTACACTATTTATGTGCG+AGG | 0.583038 | 1_1:-57750150 | Msa0031150:CDS |
| CTTCTCTCGAGCAGGAACAA+TGG | 0.585599 | 1_1:+57752110 | None:intergenic |
| CATCATGTAGTGTGGGACAA+AGG | 0.588356 | 1_1:+57755449 | None:intergenic |
| TCCATGAAGCAATTCTCTCA+TGG | 0.592727 | 1_1:+57758180 | None:intergenic |
| ATCAATTCCAATGAAGTCGT+TGG | 0.594314 | 1_1:-57758259 | Msa0031150:CDS |
| CTTACATACATCATGTAGTG+TGG | 0.595760 | 1_1:+57755441 | None:intergenic |
| TCAATGCAGAGGCCAGCACC+AGG | 0.598449 | 1_1:+57750885 | None:intergenic |
| GGAGAGGAAGGAGTTTCGAT+CGG | 0.599511 | 1_1:+57758538 | None:intergenic |
| CACGCAAACACAGTAGACGC+GGG | 0.601453 | 1_1:+57758567 | None:intergenic |
| AAATATCCAACTTTAAGGTG+TGG | 0.603114 | 1_1:+57751270 | None:intergenic |
| TGTTTGCATGCAGGAAAGTG+CGG | 0.614003 | 1_1:-57755554 | Msa0031150:intron |
| TTTAACCGCACCTCCTGCGG+GGG | 0.615781 | 1_1:-57751250 | Msa0031150:CDS |
| CCAACTTTAAGGTGTGGTAG+CGG | 0.619422 | 1_1:+57751276 | None:intergenic |
| ATATAGCAGTGCCTTGCGGT+TGG | 0.626613 | 1_1:-57751432 | Msa0031150:CDS |
| TTACATACATCATGTAGTGT+GGG | 0.629806 | 1_1:+57755442 | None:intergenic |
| CAAACACAGTAGACGCGGGG+AGG | 0.639834 | 1_1:+57758571 | None:intergenic |
| GGTATGCTGCTGCTATTGAG+AGG | 0.640973 | 1_1:-57757046 | Msa0031150:CDS |
| TGCACTGTACAATTGGGCAT+TGG | 0.643214 | 1_1:-57757006 | Msa0031150:CDS |
| ATCAGGAGATGCCATGAATG+GGG | 0.644427 | 1_1:-57750979 | Msa0031150:CDS |
| ATTTAACCGCACCTCCTGCG+GGG | 0.650150 | 1_1:-57751251 | Msa0031150:CDS |
| GAGGACACTTTAAGAACAGG+GGG | 0.652005 | 1_1:-57751743 | Msa0031150:CDS |
| CATGAACTGTATCAATGCAG+AGG | 0.654472 | 1_1:+57750874 | None:intergenic |
| TGTACGAACTGCTATCAGCA+AGG | 0.656315 | 1_1:-57752079 | Msa0031150:intron |
| GACTTCATTGGAATTGATCG+CGG | 0.661709 | 1_1:+57758264 | None:intergenic |
| CATAGATCGTACCAACCGCA+AGG | 0.665616 | 1_1:+57751421 | None:intergenic |
| CCCGAACCACAATCTCAGGA+CGG | 0.671784 | 1_1:-57758442 | Msa0031150:CDS |
| ACACGCAAACACAGTAGACG+CGG | 0.676931 | 1_1:+57758566 | None:intergenic |
| GTTGCAATTTGATTTCCACC+GGG | 0.682764 | 1_1:-57751925 | Msa0031150:CDS |
| ACGCAAACACAGTAGACGCG+GGG | 0.684515 | 1_1:+57758568 | None:intergenic |
| TCTGATCGTGCAAAGATGCG+AGG | 0.685281 | 1_1:-57754625 | Msa0031150:CDS |
| AAAGATGCGAGGCCGCACAA+AGG | 0.686655 | 1_1:-57754614 | Msa0031150:CDS |
| TTTACAGTACGGATTAGCAG+AGG | 0.686728 | 1_1:-57751762 | Msa0031150:intron |
| TTTCAGGCGCTTAATAACTG+GGG | 0.688105 | 1_1:-57754086 | Msa0031150:intron |
| TAGTGTGGGACAAAGGCGAG+TGG | 0.693067 | 1_1:+57755456 | None:intergenic |
| CAAGATTGTAAATTGCCCGG+TGG | 0.696463 | 1_1:+57751910 | None:intergenic |
| AGGTATATAGCAGTGCCTTG+CGG | 0.696530 | 1_1:-57751436 | Msa0031150:CDS |
| ATGCAGAGGCCAGCACCAGG+AGG | 0.707282 | 1_1:+57750888 | None:intergenic |
| AGAGGACACTTTAAGAACAG+GGG | 0.707286 | 1_1:-57751744 | Msa0031150:CDS |
| AGGTACCCAGAGTTGAACAG+AGG | 0.741985 | 1_1:-57751028 | Msa0031150:CDS |
| AGGACACTTTAAGAACAGGG+GGG | 0.806890 | 1_1:-57751742 | Msa0031150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATTTAATTTAAATTT+TGG | + | chr1_1:57757434-57757453 | None:intergenic | 0.0% |
| !!! | AAAAATGTTTTTTTTTAACT+CGG | + | chr1_1:57750921-57750940 | None:intergenic | 10.0% |
| !! | TTATATTCATATTTATATTC+TGG | + | chr1_1:57753207-57753226 | None:intergenic | 10.0% |
| !!! | TTTTTGAAATTATTATCAAA+TGG | + | chr1_1:57753525-57753544 | None:intergenic | 10.0% |
| !!! | ATATGATTTTAATTTTTATG+TGG | - | chr1_1:57753563-57753582 | Msa0031150:intron | 10.0% |
| !! | AAAAATTAACAAAAATTAGA+TGG | + | chr1_1:57754130-57754149 | None:intergenic | 10.0% |
| !!! | TCATTTTCTTAAATTACTAT+TGG | - | chr1_1:57750574-57750593 | Msa0031150:intron | 15.0% |
| !! | ATCTATATAAATGCTAAAAT+TGG | + | chr1_1:57750646-57750665 | None:intergenic | 15.0% |
| !!! | AAACTTATAATTTTCTTACT+TGG | - | chr1_1:57751423-57751442 | Msa0031150:CDS | 15.0% |
| !!! | GTATTTTATTAGAAAACATA+GGG | + | chr1_1:57752672-57752691 | None:intergenic | 15.0% |
| !!! | TCATTTACAACTTTAATTTT+AGG | + | chr1_1:57753134-57753153 | None:intergenic | 15.0% |
| !! | TTTCAAGATTGAAATATATT+GGG | + | chr1_1:57753397-57753416 | None:intergenic | 15.0% |
| !! | ATTTCAAGATTGAAATATAT+TGG | + | chr1_1:57753398-57753417 | None:intergenic | 15.0% |
| !! | ATATATTTCAATCTTGAAAT+TGG | - | chr1_1:57753398-57753417 | Msa0031150:intron | 15.0% |
| !! | AAAATATATATTACAGATGT+AGG | - | chr1_1:57753430-57753449 | Msa0031150:intron | 15.0% |
| !! | AAATTATTATCAAATGGAAT+GGG | + | chr1_1:57753519-57753538 | None:intergenic | 15.0% |
| !!! | TTAGTTGATTAATTTGAATT+TGG | + | chr1_1:57753725-57753744 | None:intergenic | 15.0% |
| !! | AAAATGAAAAATAGTAAAAC+AGG | + | chr1_1:57754831-57754850 | None:intergenic | 15.0% |
| !! | ATTATTATTATTATGCTCAT+CGG | - | chr1_1:57755351-57755370 | Msa0031150:intron | 15.0% |
| !!! | TATATAACATAGTTTTACTT+TGG | - | chr1_1:57755727-57755746 | Msa0031150:intron | 15.0% |
| !! | AAAAAATATTGAGAATTCTT+TGG | - | chr1_1:57755857-57755876 | Msa0031150:intron | 15.0% |
| !! | TATAAAGTACAATATTTGAA+GGG | + | chr1_1:57756282-57756301 | None:intergenic | 15.0% |
| !! | TTATAAAGTACAATATTTGA+AGG | + | chr1_1:57756283-57756302 | None:intergenic | 15.0% |
| !! | AGAGAATAAATTATATTCAA+AGG | + | chr1_1:57756504-57756523 | None:intergenic | 15.0% |
| !! | CTTAAAAAAATTCAATTTGT+CGG | + | chr1_1:57757351-57757370 | None:intergenic | 15.0% |
| !!! | ACAAATTGAATTTTTTTAAG+AGG | - | chr1_1:57757351-57757370 | Msa0031150:intron | 15.0% |
| !!! | TTTTATAATGAAAAAGTTCA+TGG | + | chr1_1:57757808-57757827 | None:intergenic | 15.0% |
| !! | GCATTTATATAGATATAGAT+AGG | - | chr1_1:57750652-57750671 | Msa0031150:intron | 20.0% |
| !! | TATCTATATATCTTCACAAA+TGG | + | chr1_1:57750694-57750713 | None:intergenic | 20.0% |
| !! | TATAGATATCGAATTATTGA+AGG | - | chr1_1:57750706-57750725 | Msa0031150:intron | 20.0% |
| !! | TTAAGCTCATTATTGAATTA+TGG | - | chr1_1:57751052-57751071 | Msa0031150:intron | 20.0% |
| !! | TAAGCTCATTATTGAATTAT+GGG | - | chr1_1:57751053-57751072 | Msa0031150:intron | 20.0% |
| !!! | TATTTTTTTGTTAGAACACT+TGG | - | chr1_1:57751611-57751630 | Msa0031150:intron | 20.0% |
| !! | ATCTTGTATTCAATAGTAAT+TGG | + | chr1_1:57752028-57752047 | None:intergenic | 20.0% |
| !! | CTACAAATAATTAGGTAAAA+AGG | - | chr1_1:57752512-57752531 | Msa0031150:intron | 20.0% |
| !!! | GGTATTTTATTAGAAAACAT+AGG | + | chr1_1:57752673-57752692 | None:intergenic | 20.0% |
| !!! | TTTTATTTGTACATAAGTAC+AGG | - | chr1_1:57752737-57752756 | Msa0031150:intron | 20.0% |
| !!! | TTTTACATATGAAAAATCCT+TGG | - | chr1_1:57752836-57752855 | Msa0031150:intron | 20.0% |
| !!! | TCATTTAAGATTTTCTTTAG+TGG | + | chr1_1:57753243-57753262 | None:intergenic | 20.0% |
| !! | ACTAAAGAAAATCTTAAATG+AGG | - | chr1_1:57753242-57753261 | Msa0031150:intron | 20.0% |
| !! | CTAAAGAAAATCTTAAATGA+GGG | - | chr1_1:57753243-57753262 | Msa0031150:intron | 20.0% |
| !! | TTCAAGATTGAAATATATTG+GGG | + | chr1_1:57753396-57753415 | None:intergenic | 20.0% |
| !! | GAAATTATTATCAAATGGAA+TGG | + | chr1_1:57753520-57753539 | None:intergenic | 20.0% |
| !! | GAATTCATATTGAATTTGAA+TGG | - | chr1_1:57754072-57754091 | Msa0031150:intron | 20.0% |
| !!! | TTGTTAATTTTTTTTTTCCC+AGG | - | chr1_1:57754138-57754157 | Msa0031150:intron | 20.0% |
| !! | TGATAAAGCAAATATTTACT+GGG | + | chr1_1:57754297-57754316 | None:intergenic | 20.0% |
| !! | ATGATAAAGCAAATATTTAC+TGG | + | chr1_1:57754298-57754317 | None:intergenic | 20.0% |
| !! | ATTGTTTCAACTACATTAAA+AGG | + | chr1_1:57754901-57754920 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTATGAAATCCAA+TGG | + | chr1_1:57754969-57754988 | None:intergenic | 20.0% |
| !! | AAACAAAATATATTGAACTG+AGG | + | chr1_1:57755167-57755186 | None:intergenic | 20.0% |
| !!! | ACATTTCAAGATTTTAAAAC+TGG | + | chr1_1:57755403-57755422 | None:intergenic | 20.0% |
| !!! | TTATACTCCTTATAATCTTT+TGG | - | chr1_1:57755486-57755505 | Msa0031150:CDS | 20.0% |
| !!! | TTTTTTGACCAAATTTTACA+CGG | + | chr1_1:57755801-57755820 | None:intergenic | 20.0% |
| !!! | TACCATAACAAAAGTTTTAT+AGG | + | chr1_1:57755901-57755920 | None:intergenic | 20.0% |
| !!! | TACCATAACTAAAGTTTTAT+AGG | + | chr1_1:57755946-57755965 | None:intergenic | 20.0% |
| !! | TTTAGTTATGGTAAATTACA+AGG | - | chr1_1:57755953-57755972 | Msa0031150:intron | 20.0% |
| !!! | TACCATAACTAAAGTTTTAT+AGG | + | chr1_1:57755946-57755965 | None:intergenic | 20.0% |
| !! | TTTAGTTATGGTAAATTACA+AGG | - | chr1_1:57755953-57755972 | Msa0031150:intron | 20.0% |
| !! | ATAAAGTACAATATTTGAAG+GGG | + | chr1_1:57756281-57756300 | None:intergenic | 20.0% |
| !!! | TATTTTCTTCTCTGAAAATT+TGG | - | chr1_1:57756345-57756364 | Msa0031150:intron | 20.0% |
| !!! | AAGGTAGATATTTTTTAGAA+GGG | - | chr1_1:57756440-57756459 | Msa0031150:intron | 20.0% |
| !! | AGAATAAGGTAAAGTTAAAA+GGG | + | chr1_1:57756529-57756548 | None:intergenic | 20.0% |
| !! | AAGAATAAGGTAAAGTTAAA+AGG | + | chr1_1:57756530-57756549 | None:intergenic | 20.0% |
| !! | CTTCCTTTACAAATATTTAT+TGG | - | chr1_1:57756897-57756916 | Msa0031150:intron | 20.0% |
| !! | TAGCCAATAAATATTTGTAA+AGG | + | chr1_1:57756903-57756922 | None:intergenic | 20.0% |
| !! | GTTGCAAAAAAAATAATAAC+AGG | + | chr1_1:57757004-57757023 | None:intergenic | 20.0% |
| !!! | ACATTAAGTTTTGAATTCAT+TGG | - | chr1_1:57757380-57757399 | Msa0031150:intron | 20.0% |
| !! | GTCTTTGGTTAAAATTTATT+TGG | + | chr1_1:57757757-57757776 | None:intergenic | 20.0% |
| !!! | AATAAATTGTCGACTTTAAT+TGG | - | chr1_1:57757950-57757969 | Msa0031150:intron | 20.0% |
| !! | AGAACAATTGTTAATTACAT+TGG | + | chr1_1:57758138-57758157 | None:intergenic | 20.0% |
| !! | TTCATAATCTTACTAAAACT+TGG | + | chr1_1:57758168-57758187 | None:intergenic | 20.0% |
| !!! | AAGTTTTAGTAAGATTATGA+AGG | - | chr1_1:57758167-57758186 | Msa0031150:CDS | 20.0% |
| !!! | AGTTTTAGTAAGATTATGAA+GGG | - | chr1_1:57758168-57758187 | Msa0031150:CDS | 20.0% |
| !! | TGTTAATTGTATTACCAATT+TGG | - | chr1_1:57758419-57758438 | Msa0031150:CDS | 20.0% |
| !!! | TTTTGCCAATAATTCATATT+TGG | - | chr1_1:57758585-57758604 | Msa0031150:five_prime_UTR | 20.0% |
| !! | TTTGCCAATAATTCATATTT+GGG | - | chr1_1:57758586-57758605 | Msa0031150:five_prime_UTR | 20.0% |
| !! | TTAACCCAAATATGAATTAT+TGG | + | chr1_1:57758593-57758612 | None:intergenic | 20.0% |
| !!! | ATTTGGGTTAATTATGTTTT+TGG | - | chr1_1:57758602-57758621 | Msa0031150:five_prime_UTR | 20.0% |
| ! | AATTATGATTAGTAGAGCAT+AGG | - | chr1_1:57750429-57750448 | Msa0031150:intron | 25.0% |
| ! | ATTTGATTAATTTACACTGC+CGG | - | chr1_1:57750729-57750748 | Msa0031150:intron | 25.0% |
| !! | GATGTAAAAATGTTTTACAC+CGG | + | chr1_1:57750751-57750770 | None:intergenic | 25.0% |
| ! | TCTAATCTTTCGTGAATATT+AGG | - | chr1_1:57751332-57751351 | Msa0031150:intron | 25.0% |
| !! | TTTTCTTACTTGGATTTTCT+AGG | - | chr1_1:57751433-57751452 | Msa0031150:CDS | 25.0% |
| !!! | TGTAGACTTTATTTCTGTAT+TGG | - | chr1_1:57751587-57751606 | Msa0031150:intron | 25.0% |
| !!! | GTAGACTTTATTTCTGTATT+GGG | - | chr1_1:57751588-57751607 | Msa0031150:intron | 25.0% |
| !!! | TTGATAGGTTTGTTAATTGA+GGG | - | chr1_1:57751647-57751666 | Msa0031150:intron | 25.0% |
| ! | TGTTACGTATAGATAAAAAG+AGG | - | chr1_1:57751737-57751756 | Msa0031150:CDS | 25.0% |
| ! | GTTACGTATAGATAAAAAGA+GGG | - | chr1_1:57751738-57751757 | Msa0031150:CDS | 25.0% |
| ! | TTACGTATAGATAAAAAGAG+GGG | - | chr1_1:57751739-57751758 | Msa0031150:CDS | 25.0% |
| ! | TGTAATTTCATTTGAGAGTT+GGG | - | chr1_1:57751776-57751795 | Msa0031150:intron | 25.0% |
| ! | AAACACATTCTAGATAATCT+TGG | - | chr1_1:57751904-57751923 | Msa0031150:CDS | 25.0% |
| ! | AGCTATATTGTTGAACTTAT+TGG | - | chr1_1:57752388-57752407 | Msa0031150:intron | 25.0% |
| !!! | ATTTATATTCTGGCTCATTT+AGG | + | chr1_1:57753197-57753216 | None:intergenic | 25.0% |
| ! | TGTAACAAACATCATTTAGT+AGG | + | chr1_1:57754047-57754066 | None:intergenic | 25.0% |
| ! | GATAAAGCAAATATTTACTG+GGG | + | chr1_1:57754296-57754315 | None:intergenic | 25.0% |
| !! | AAGAAAACTTAAAGGTGTAT+AGG | + | chr1_1:57754339-57754358 | None:intergenic | 25.0% |
| ! | ATAAACACACATTTAACTGA+GGG | + | chr1_1:57754568-57754587 | None:intergenic | 25.0% |
| ! | AATAAACACACATTTAACTG+AGG | + | chr1_1:57754569-57754588 | None:intergenic | 25.0% |
| !!! | ATAAATTACCAAAGTGCTTT+TGG | + | chr1_1:57754728-57754747 | None:intergenic | 25.0% |
| !! | CAATAGAACATTTTCGTTTA+AGG | - | chr1_1:57755000-57755019 | Msa0031150:intron | 25.0% |
| !!! | CGTTTAAGGTTTGTTATTAA+TGG | - | chr1_1:57755014-57755033 | Msa0031150:intron | 25.0% |
| ! | AGTTCAACTTCAATAAAAAC+TGG | + | chr1_1:57755068-57755087 | None:intergenic | 25.0% |
| !!! | ATTTGATCTACTTTTCTCAT+TGG | - | chr1_1:57755095-57755114 | Msa0031150:intron | 25.0% |
| !! | ATTTTCCAATAGGATGTTTT+TGG | + | chr1_1:57755558-57755577 | None:intergenic | 25.0% |
| ! | ATGTAATGCAAAAAAAGCAA+GGG | + | chr1_1:57755586-57755605 | None:intergenic | 25.0% |
| ! | AATGTAATGCAAAAAAAGCA+AGG | + | chr1_1:57755587-57755606 | None:intergenic | 25.0% |
| !!! | TGCTTTTTTTGCATTACATT+TGG | - | chr1_1:57755587-57755606 | Msa0031150:intron | 25.0% |
| ! | GTAAAATTTGGTCAAAAAAC+AGG | - | chr1_1:57755802-57755821 | Msa0031150:intron | 25.0% |
| !! | CTTTGGCAAAATATTTTACT+TGG | - | chr1_1:57755874-57755893 | Msa0031150:intron | 25.0% |
| !! | GTCCTATAAAACTTTTGTTA+TGG | - | chr1_1:57755896-57755915 | Msa0031150:intron | 25.0% |
| ! | TTGTTATGGTAAACTACAAA+AGG | - | chr1_1:57755910-57755929 | Msa0031150:intron | 25.0% |
| ! | TGTTATGGTAAACTACAAAA+GGG | - | chr1_1:57755911-57755930 | Msa0031150:intron | 25.0% |
| ! | GTCCTATAAAACTTTAGTTA+TGG | - | chr1_1:57755941-57755960 | Msa0031150:intron | 25.0% |
| ! | TTATGGTAAATTACAAGGAA+GGG | - | chr1_1:57755958-57755977 | Msa0031150:intron | 25.0% |
| ! | AATGTTATCATATGACTAGA+AGG | + | chr1_1:57756059-57756078 | None:intergenic | 25.0% |
| ! | TAACATTCATAACTGTTTCA+AGG | - | chr1_1:57756072-57756091 | Msa0031150:intron | 25.0% |
| ! | GTCCTATAAAACTTTAGTTA+TGG | - | chr1_1:57755941-57755960 | Msa0031150:intron | 25.0% |
| ! | TTATGGTAAATTACAAGGAA+GGG | - | chr1_1:57755958-57755977 | Msa0031150:intron | 25.0% |
| !! | GAAAATTTGGTTTCCAATTT+AGG | - | chr1_1:57756358-57756377 | Msa0031150:intron | 25.0% |
| !!! | CAAGGTAGATATTTTTTAGA+AGG | - | chr1_1:57756439-57756458 | Msa0031150:intron | 25.0% |
| ! | GAATAAGGTAAAGTTAAAAG+GGG | + | chr1_1:57756528-57756547 | None:intergenic | 25.0% |
| ! | TAATAACAGGACAAAATAGA+AGG | + | chr1_1:57756991-57757010 | None:intergenic | 25.0% |
| ! | TATACAATACAAATACACTC+AGG | + | chr1_1:57757685-57757704 | None:intergenic | 25.0% |
| !!! | TTAAAATTTATTTGGTGCTC+TGG | + | chr1_1:57757749-57757768 | None:intergenic | 25.0% |
| ! | GGTAATTTCATTATTGAATG+TGG | + | chr1_1:57757840-57757859 | None:intergenic | 25.0% |
| ! | AACTAATGTTACAAGTTGTT+GGG | + | chr1_1:57757874-57757893 | None:intergenic | 25.0% |
| ! | AAACTAATGTTACAAGTTGT+TGG | + | chr1_1:57757875-57757894 | None:intergenic | 25.0% |
| !! | TTTTGTACATTGCTTTAACA+AGG | - | chr1_1:57758277-57758296 | Msa0031150:CDS | 25.0% |
| ATATTGGACAAGTTCATACA+TGG | - | chr1_1:57750815-57750834 | Msa0031150:intron | 30.0% | |
| !! | CTAATTTTAGCGAACTCATA+TGG | - | chr1_1:57750998-57751017 | Msa0031150:CDS | 30.0% |
| AAAGCATAACATATTCCTAG+CGG | + | chr1_1:57751313-57751332 | None:intergenic | 30.0% | |
| ATTATGATGCACTGTACAAT+TGG | - | chr1_1:57751487-57751506 | Msa0031150:intron | 30.0% | |
| TTATGATGCACTGTACAATT+GGG | - | chr1_1:57751488-57751507 | Msa0031150:intron | 30.0% | |
| !! | GTTGATAGGTTTGTTAATTG+AGG | - | chr1_1:57751646-57751665 | Msa0031150:intron | 30.0% |
| TTAGTTGGTCAGTTAATAGT+TGG | - | chr1_1:57751678-57751697 | Msa0031150:CDS | 30.0% | |
| GTGTAATTTCATTTGAGAGT+TGG | - | chr1_1:57751775-57751794 | Msa0031150:intron | 30.0% | |
| ! | TAAGACATGTTTCTATCAAG+TGG | - | chr1_1:57751816-57751835 | Msa0031150:intron | 30.0% |
| GATAATCTTGGAGAATTAAG+TGG | - | chr1_1:57751916-57751935 | Msa0031150:CDS | 30.0% | |
| AGTTTCAAAAAGAGAACTCT+AGG | - | chr1_1:57751944-57751963 | Msa0031150:CDS | 30.0% | |
| ACATCTACGAATCACAATAT+TGG | - | chr1_1:57751971-57751990 | Msa0031150:intron | 30.0% | |
| AATCACAATATTGGTAAGAG+AGG | - | chr1_1:57751980-57751999 | Msa0031150:intron | 30.0% | |
| ! | TGGATGTTATTTGATAACAC+TGG | - | chr1_1:57752213-57752232 | Msa0031150:intron | 30.0% |
| TGTCTCATGTAAATTCAACT+AGG | + | chr1_1:57752241-57752260 | None:intergenic | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | + | chr1_1:57752273-57752292 | None:intergenic | 30.0% | |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr1_1:57752437-57752456 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr1_1:57752438-57752457 | None:intergenic | 30.0% |
| ! | TGAATAAGTTTGATAGCAAC+TGG | + | chr1_1:57752694-57752713 | None:intergenic | 30.0% |
| TTACATACATCATGTAGTGT+GGG | + | chr1_1:57753061-57753080 | None:intergenic | 30.0% | |
| CTGTATGATGTTTAGATGAA+CGG | - | chr1_1:57753093-57753112 | Msa0031150:intron | 30.0% | |
| TGTATGATGTTTAGATGAAC+GGG | - | chr1_1:57753094-57753113 | Msa0031150:intron | 30.0% | |
| ACATGCTTCCTTCTATTAAA+TGG | - | chr1_1:57753945-57753964 | Msa0031150:intron | 30.0% | |
| CGTAAAAGCCATTTAATAGA+AGG | + | chr1_1:57753956-57753975 | None:intergenic | 30.0% | |
| ! | AATGGCTTTTACGCATATTT+AGG | - | chr1_1:57753963-57753982 | Msa0031150:intron | 30.0% |
| ! | GGGGAAATTGATATGATTTT+TGG | - | chr1_1:57753990-57754009 | Msa0031150:intron | 30.0% |
| AGCTTGTGAAGAAAACTTAA+AGG | + | chr1_1:57754347-57754366 | None:intergenic | 30.0% | |
| !! | ATGCTTCTAATAGCTTGTTA+GGG | - | chr1_1:57754534-57754553 | Msa0031150:intron | 30.0% |
| TAAACACACATTTAACTGAG+GGG | + | chr1_1:57754567-57754586 | None:intergenic | 30.0% | |
| !!! | TTTTCATACCAAAAGCACTT+TGG | - | chr1_1:57754717-57754736 | Msa0031150:intron | 30.0% |
| TGTATACATGATAACACTCT+TGG | + | chr1_1:57754760-57754779 | None:intergenic | 30.0% | |
| AAACAATGTGTTCAAACACT+AGG | - | chr1_1:57754914-57754933 | Msa0031150:intron | 30.0% | |
| TATATTGAACTGAGGCATAT+GGG | + | chr1_1:57755159-57755178 | None:intergenic | 30.0% | |
| ATATATTGAACTGAGGCATA+TGG | + | chr1_1:57755160-57755179 | None:intergenic | 30.0% | |
| AAGCATACAACTAAATGACA+AGG | + | chr1_1:57755250-57755269 | None:intergenic | 30.0% | |
| TGATAATAGATTGAGAGGAT+AGG | + | chr1_1:57755303-57755322 | None:intergenic | 30.0% | |
| ATGACTGATAATAGATTGAG+AGG | + | chr1_1:57755308-57755327 | None:intergenic | 30.0% | |
| TGGATAAAAGATTATGGAAG+TGG | + | chr1_1:57755426-57755445 | None:intergenic | 30.0% | |
| ! | AGAAAGTGTGAAATTCAAGA+GGG | + | chr1_1:57755450-57755469 | None:intergenic | 30.0% |
| ! | AAGAAAGTGTGAAATTCAAG+AGG | + | chr1_1:57755451-57755470 | None:intergenic | 30.0% |
| TTGTCGACCAAAAGATTATA+AGG | + | chr1_1:57755496-57755515 | None:intergenic | 30.0% | |
| AGGATGCTTGAAAATAGAAT+TGG | + | chr1_1:57755638-57755657 | None:intergenic | 30.0% | |
| ATAGATCAATGACTCTACTA+AGG | + | chr1_1:57755698-57755717 | None:intergenic | 30.0% | |
| GGCACTAAAAACAATAAAAG+AGG | + | chr1_1:57755776-57755795 | None:intergenic | 30.0% | |
| GTTATGGTAAACTACAAAAG+GGG | - | chr1_1:57755912-57755931 | Msa0031150:intron | 30.0% | |
| GTTATGGTAAATTACAAGGA+AGG | - | chr1_1:57755957-57755976 | Msa0031150:intron | 30.0% | |
| AAGGTGACAAATTGAAGTTA+TGG | + | chr1_1:57756040-57756059 | None:intergenic | 30.0% | |
| ATTCATAACTGTTTCAAGGA+AGG | - | chr1_1:57756076-57756095 | Msa0031150:intron | 30.0% | |
| TTCATAACTGTTTCAAGGAA+GGG | - | chr1_1:57756077-57756096 | Msa0031150:intron | 30.0% | |
| !! | GTTAATTTGTCACCTTCAAT+TGG | - | chr1_1:57756099-57756118 | Msa0031150:intron | 30.0% |
| !! | AGTTTTATAGGACCAATTGA+AGG | + | chr1_1:57756114-57756133 | None:intergenic | 30.0% |
| GTTATGGTAAATTACAAGGA+AGG | - | chr1_1:57755957-57755976 | Msa0031150:intron | 30.0% | |
| AAGGTGACAAATTGAAGTTA+TGG | + | chr1_1:57756040-57756059 | None:intergenic | 30.0% | |
| AATGTTATCGTATGACTAGA+AGG | + | chr1_1:57756239-57756258 | None:intergenic | 30.0% | |
| AACATTCATAACTGTTTCCA+AGG | - | chr1_1:57756253-57756272 | Msa0031150:intron | 30.0% | |
| !!! | TTTTTTAGAAGGGAATCACA+TGG | - | chr1_1:57756450-57756469 | Msa0031150:intron | 30.0% |
| GAAATCAAATTGCAACTGTA+TGG | + | chr1_1:57756571-57756590 | None:intergenic | 30.0% | |
| TGCTAAATGACTTTACAGTA+CGG | - | chr1_1:57756727-57756746 | Msa0031150:intron | 30.0% | |
| CTGCAATATATATTGCAGAT+TGG | + | chr1_1:57756825-57756844 | None:intergenic | 30.0% | |
| AAAGGAAGATGATTAGACAA+TGG | + | chr1_1:57756885-57756904 | None:intergenic | 30.0% | |
| ! | TATTGGCTATGTGCATTATT+TGG | - | chr1_1:57756914-57756933 | Msa0031150:intron | 30.0% |
| GTGCATTATTTGGATTGTAA+AGG | - | chr1_1:57756924-57756943 | Msa0031150:intron | 30.0% | |
| !!! | GAAATCAGCCCATAATTTTT+TGG | - | chr1_1:57757033-57757052 | Msa0031150:CDS | 30.0% |
| AGTACATATTATGCGCTATA+TGG | - | chr1_1:57757105-57757124 | Msa0031150:intron | 30.0% | |
| !! | AAATATCCAACTTTAAGGTG+TGG | + | chr1_1:57757233-57757252 | None:intergenic | 30.0% |
| CGGTTAAATATCCAACTTTA+AGG | + | chr1_1:57757238-57757257 | None:intergenic | 30.0% | |
| ! | GAAACGATCAGAATTCTTTT+TGG | - | chr1_1:57757298-57757317 | Msa0031150:intron | 30.0% |
| !!! | AGTTTTTTTATCCCCATTCA+TGG | + | chr1_1:57757535-57757554 | None:intergenic | 30.0% |
| CAATTGCTCTATATTGTCTT+TGG | + | chr1_1:57757772-57757791 | None:intergenic | 30.0% | |
| AAGACAATATAGAGCAATTG+TGG | - | chr1_1:57757772-57757791 | Msa0031150:intron | 30.0% | |
| TAAAAAAGTCATGCCATCAA+GGG | + | chr1_1:57758033-57758052 | None:intergenic | 30.0% | |
| ATAAAAAAGTCATGCCATCA+AGG | + | chr1_1:57758034-57758053 | None:intergenic | 30.0% | |
| !! | TTTAGCCTTATATCAAAGCA+CGG | + | chr1_1:57758074-57758093 | None:intergenic | 30.0% |
| ATCTTACTAAAACTTGGACT+TGG | + | chr1_1:57758162-57758181 | None:intergenic | 30.0% | |
| ! | TAAAGAGATTCTCATGCTTT+TGG | + | chr1_1:57758228-57758247 | None:intergenic | 30.0% |
| AATCCACGACATTTAATAGA+TGG | + | chr1_1:57758567-57758586 | None:intergenic | 30.0% | |
| !!! | GGTTTTGGAATGATGAATTG+GGG | + | chr1_1:57749986-57750005 | None:intergenic | 35.0% |
| !!! | GGGTTTTGGAATGATGAATT+GGG | + | chr1_1:57749987-57750006 | None:intergenic | 35.0% |
| !!! | AGGGTTTTGGAATGATGAAT+TGG | + | chr1_1:57749988-57750007 | None:intergenic | 35.0% |
| !!! | ATTTTGGAGTGTTAGGGTTT+TGG | + | chr1_1:57750001-57750020 | None:intergenic | 35.0% |
| !!! | TCAGACATTTTGGAGTGTTA+GGG | + | chr1_1:57750007-57750026 | None:intergenic | 35.0% |
| !!! | TTCAGACATTTTGGAGTGTT+AGG | + | chr1_1:57750008-57750027 | None:intergenic | 35.0% |
| !!! | AGATTCTGGTTCAGACATTT+TGG | + | chr1_1:57750017-57750036 | None:intergenic | 35.0% |
| !! | ATTCGATTTGGATTCTGGTT+CGG | + | chr1_1:57750089-57750108 | None:intergenic | 35.0% |
| TGTACTTGTTCTTGTGATTC+TGG | + | chr1_1:57750151-57750170 | None:intergenic | 35.0% | |
| ATCACAAGAACAAGTACAAC+TGG | - | chr1_1:57750153-57750172 | Msa0031150:CDS | 35.0% | |
| ATCGTTGTTAACTTCTGGAT+CGG | + | chr1_1:57750200-57750219 | None:intergenic | 35.0% | |
| ATCAATTCCAATGAAGTCGT+TGG | - | chr1_1:57750241-57750260 | Msa0031150:intron | 35.0% | |
| AGAGCTAACATCTTCTCTTT+CGG | + | chr1_1:57750365-57750384 | None:intergenic | 35.0% | |
| GATGAAATTGAAAGGTTCAG+AGG | + | chr1_1:57750401-57750420 | None:intergenic | 35.0% | |
| GCGAAAACGATGAAATTGAA+AGG | + | chr1_1:57750409-57750428 | None:intergenic | 35.0% | |
| ! | TTAGTAGAGCATAGGTATTG+CGG | - | chr1_1:57750437-57750456 | Msa0031150:intron | 35.0% |
| ! | ACATCTTTGATCAGAAGTGT+TGG | + | chr1_1:57750505-57750524 | None:intergenic | 35.0% |
| ACTTCTGATCAAAGATGTTG+TGG | - | chr1_1:57750507-57750526 | Msa0031150:intron | 35.0% | |
| ATCAAATCACATGTCAGTGT+CGG | + | chr1_1:57750540-57750559 | None:intergenic | 35.0% | |
| TACTATTGGTATCAACGTGT+CGG | - | chr1_1:57750588-57750607 | Msa0031150:intron | 35.0% | |
| AGTGGTTCATAGTTGAGAAA+TGG | - | chr1_1:57750618-57750637 | Msa0031150:intron | 35.0% | |
| !! | CATTTTTACATCGACTGTGT+TGG | - | chr1_1:57750759-57750778 | Msa0031150:intron | 35.0% |
| !! | TTGCTCTGGCTTTACTATAT+TGG | - | chr1_1:57750799-57750818 | Msa0031150:intron | 35.0% |
| ! | TTTTAGCGAACTCATATGGT+TGG | - | chr1_1:57751002-57751021 | Msa0031150:CDS | 35.0% |
| !!! | TGATTTGCTTTTGCTTCTCA+GGG | - | chr1_1:57751382-57751401 | Msa0031150:intron | 35.0% |
| ACAGTGCATCATAATCTTCA+GGG | + | chr1_1:57751482-57751501 | None:intergenic | 35.0% | |
| TACAGTGCATCATAATCTTC+AGG | + | chr1_1:57751483-57751502 | None:intergenic | 35.0% | |
| ! | TATGTAGTATTGAAGTGTGC+TGG | - | chr1_1:57751549-57751568 | Msa0031150:intron | 35.0% |
| ! | ATGTAGTATTGAAGTGTGCT+GGG | - | chr1_1:57751550-57751569 | Msa0031150:intron | 35.0% |
| GGCTTCATATCAATGTTGAT+AGG | - | chr1_1:57751632-57751651 | Msa0031150:intron | 35.0% | |
| TTGAGGGAGTTAAACTTAGT+TGG | - | chr1_1:57751663-57751682 | Msa0031150:CDS | 35.0% | |
| GATAAAAAGAGGGGTTTAGA+AGG | - | chr1_1:57751748-57751767 | Msa0031150:CDS | 35.0% | |
| !! | TGTCTTATTTAGTTGCCCAA+AGG | + | chr1_1:57751803-57751822 | None:intergenic | 35.0% |
| TCGCAATCAATAACACTACT+AGG | + | chr1_1:57752073-57752092 | None:intergenic | 35.0% | |
| ! | GTAGTGTTATTGATTGCGAA+TGG | - | chr1_1:57752074-57752093 | Msa0031150:intron | 35.0% |
| TATAGCCAATTTGTGAAGGA+CGG | + | chr1_1:57752171-57752190 | None:intergenic | 35.0% | |
| TTTGGGAGAACTTGAGAAAA+CGG | + | chr1_1:57752420-57752439 | None:intergenic | 35.0% | |
| GCTTATTTGAGCTTATCTAC+TGG | + | chr1_1:57752462-57752481 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+TGG | - | chr1_1:57752472-57752491 | Msa0031150:intron | 35.0% | |
| TGTTGCCTACAAATAAGAAG+AGG | - | chr1_1:57752537-57752556 | Msa0031150:intron | 35.0% | |
| GTTGCCTACAAATAAGAAGA+GGG | - | chr1_1:57752538-57752557 | Msa0031150:intron | 35.0% | |
| TTGCCTACAAATAAGAAGAG+GGG | - | chr1_1:57752539-57752558 | Msa0031150:intron | 35.0% | |
| !!! | TCTTGTCATTTTGAGAGTTG+AGG | - | chr1_1:57752581-57752600 | Msa0031150:intron | 35.0% |
| ! | TATTAGCTGACAGAAGTGTA+TGG | + | chr1_1:57752763-57752782 | None:intergenic | 35.0% |
| GAGAAAATGCAAAATACACG+AGG | + | chr1_1:57752800-57752819 | None:intergenic | 35.0% | |
| GTATGTTCGTAATGTATCCA+AGG | + | chr1_1:57752856-57752875 | None:intergenic | 35.0% | |
| GAATGAACTACTTCAAAGCT+TGG | + | chr1_1:57752920-57752939 | None:intergenic | 35.0% | |
| TTCATTCATTGTTTGCATGC+AGG | - | chr1_1:57752937-57752956 | Msa0031150:intron | 35.0% | |
| AGCTTGCAAAAAATATGACG+AGG | - | chr1_1:57753021-57753040 | Msa0031150:intron | 35.0% | |
| CTTACATACATCATGTAGTG+TGG | + | chr1_1:57753062-57753081 | None:intergenic | 35.0% | |
| CACACTACATGATGTATGTA+AGG | - | chr1_1:57753060-57753079 | Msa0031150:intron | 35.0% | |
| ! | GTGAAAAGTACGGATAAACT+AGG | + | chr1_1:57753762-57753781 | None:intergenic | 35.0% |
| ATCGTTCTCTGTGAAAAGTA+CGG | + | chr1_1:57753772-57753791 | None:intergenic | 35.0% | |
| TATCCAGGCTTACTACAATT+GGG | - | chr1_1:57753841-57753860 | Msa0031150:intron | 35.0% | |
| ! | TTTTACGCATATTTAGGCTC+TGG | - | chr1_1:57753969-57753988 | Msa0031150:intron | 35.0% |
| TTTACGCATATTTAGGCTCT+GGG | - | chr1_1:57753970-57753989 | Msa0031150:intron | 35.0% | |
| CATCATTTAGTAGGCATCAA+GGG | + | chr1_1:57754038-57754057 | None:intergenic | 35.0% | |
| ACATCATTTAGTAGGCATCA+AGG | + | chr1_1:57754039-57754058 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTTTCCCAGGCAAC+AGG | - | chr1_1:57754145-57754164 | Msa0031150:intron | 35.0% |
| !!! | TTTTTTTTTCCCAGGCAACA+GGG | - | chr1_1:57754146-57754165 | Msa0031150:intron | 35.0% |
| AAAAAAGAGAGAAGAACCTG+AGG | + | chr1_1:57754208-57754227 | None:intergenic | 35.0% | |
| TTCGATGAGAGTCAGTAAAA+GGG | + | chr1_1:57754390-57754409 | None:intergenic | 35.0% | |
| ATTCGATGAGAGTCAGTAAA+AGG | + | chr1_1:57754391-57754410 | None:intergenic | 35.0% | |
| ACTCTCATCGAATCTATTTC+AGG | - | chr1_1:57754398-57754417 | Msa0031150:intron | 35.0% | |
| TATTTCAGGCGCTTAATAAC+TGG | - | chr1_1:57754412-57754431 | Msa0031150:intron | 35.0% | |
| ATTTCAGGCGCTTAATAACT+GGG | - | chr1_1:57754413-57754432 | Msa0031150:intron | 35.0% | |
| !! | CATGCTTCTAATAGCTTGTT+AGG | - | chr1_1:57754533-57754552 | Msa0031150:intron | 35.0% |
| ! | TTTCATCCTTTTCTATGAGC+TGG | - | chr1_1:57754671-57754690 | Msa0031150:intron | 35.0% |
| ACATGATAACACTCTTGGAT+AGG | + | chr1_1:57754755-57754774 | None:intergenic | 35.0% | |
| ATGACTGTCTTGATACATAG+AGG | + | chr1_1:57754796-57754815 | None:intergenic | 35.0% | |
| GGAAGGGTCAATAAATTTCA+AGG | + | chr1_1:57755213-57755232 | None:intergenic | 35.0% | |
| GAGGGTTGGATAAAAGATTA+TGG | + | chr1_1:57755432-57755451 | None:intergenic | 35.0% | |
| CCTGATAGTATTTCAAGACT+CGG | - | chr1_1:57755529-57755548 | Msa0031150:CDS | 35.0% | |
| CTGATAGTATTTCAAGACTC+GGG | - | chr1_1:57755530-57755549 | Msa0031150:CDS | 35.0% | |
| ! | AAGGGTTCACATTTTCCAAT+AGG | + | chr1_1:57755568-57755587 | None:intergenic | 35.0% |
| ATCCTTGTAGAACATTACTC+AGG | - | chr1_1:57755653-57755672 | Msa0031150:intron | 35.0% | |
| TACCTGAGTAATGTTCTACA+AGG | + | chr1_1:57755658-57755677 | None:intergenic | 35.0% | |
| ! | TCTACTAAGGTGCTAATGTT+AGG | + | chr1_1:57755685-57755704 | None:intergenic | 35.0% |
| TAAACTACAAAAGGGGAACT+TGG | - | chr1_1:57755919-57755938 | Msa0031150:intron | 35.0% | |
| ACCAACAATAAACCCACAAT+TGG | + | chr1_1:57755987-57756006 | None:intergenic | 35.0% | |
| ! | TCCTGATTTGCATTTGTAAG+AGG | - | chr1_1:57756008-57756027 | Msa0031150:intron | 35.0% |
| ACCAACAATAAACCCACAAT+TGG | + | chr1_1:57755987-57756006 | None:intergenic | 35.0% | |
| ! | TCCTGATTTGCATTTGTAAG+AGG | - | chr1_1:57756008-57756027 | Msa0031150:intron | 35.0% |
| ! | AGTTGCAATTTGATTTCCAC+CGG | - | chr1_1:57756574-57756593 | Msa0031150:intron | 35.0% |
| TTCCAAGATTGTAAATTGCC+CGG | + | chr1_1:57756596-57756615 | None:intergenic | 35.0% | |
| TTACAATCTTGGAACTGTTC+TGG | - | chr1_1:57756602-57756621 | Msa0031150:intron | 35.0% | |
| ! | GATTGGCTGTACAATTCATT+TGG | + | chr1_1:57756808-57756827 | None:intergenic | 35.0% |
| TGGCTTCTTACTGAATAGTT+TGG | + | chr1_1:57756865-57756884 | None:intergenic | 35.0% | |
| GCCACACACCAAAAAATTAT+GGG | + | chr1_1:57757044-57757063 | None:intergenic | 35.0% | |
| TGCCACACACCAAAAAATTA+TGG | + | chr1_1:57757045-57757064 | None:intergenic | 35.0% | |
| !!! | ATAATTTTTTGGTGTGTGGC+AGG | - | chr1_1:57757044-57757063 | Msa0031150:CDS | 35.0% |
| GAATTCATTGGATAACCTCT+AGG | - | chr1_1:57757392-57757411 | Msa0031150:intron | 35.0% | |
| AGTTCATGGATCAGTTTACT+TGG | - | chr1_1:57757641-57757660 | Msa0031150:intron | 35.0% | |
| !!! | TTAGTTTGCCATTTTTGCGA+TGG | - | chr1_1:57757894-57757913 | Msa0031150:intron | 35.0% |
| CTAAACCCTATGTATTTCCT+GGG | - | chr1_1:57758089-57758108 | Msa0031150:intron | 35.0% | |
| !! | ATTACATTGGTGTTGAGTCA+GGG | + | chr1_1:57758125-57758144 | None:intergenic | 35.0% |
| !! | AATTACATTGGTGTTGAGTC+AGG | + | chr1_1:57758126-57758145 | None:intergenic | 35.0% |
| GTAAGATTATGAAGGGTTGA+TGG | - | chr1_1:57758175-57758194 | Msa0031150:CDS | 35.0% | |
| CTCAATTTGACAGACCAAAT+TGG | + | chr1_1:57758436-57758455 | None:intergenic | 35.0% | |
| TAGCCATCTATTAAATGTCG+TGG | - | chr1_1:57758561-57758580 | Msa0031150:five_prime_UTR | 35.0% | |
| TTCTTCGTTCAGCATTGCAT+TGG | - | chr1_1:57749897-57749916 | Msa0031150:three_prime_UTR | 40.0% | |
| !!! | TGAGGTTCGTTTTGAGATTC+TGG | + | chr1_1:57750031-57750050 | None:intergenic | 40.0% |
| !! | TTCGATTTGGATTCTGGTTC+GGG | + | chr1_1:57750088-57750107 | None:intergenic | 40.0% |
| !! | TCGTGATTCGATTTGGATTC+TGG | + | chr1_1:57750094-57750113 | None:intergenic | 40.0% |
| ATCAGGTTCGTGATTCGATT+TGG | + | chr1_1:57750101-57750120 | None:intergenic | 40.0% | |
| ! | TGATTCTGGTTGTTCTGGTT+CGG | + | chr1_1:57750137-57750156 | None:intergenic | 40.0% |
| ! | TCTTGTGATTCTGGTTGTTC+TGG | + | chr1_1:57750142-57750161 | None:intergenic | 40.0% |
| AGAACAAGTACAACTGGAAC+CGG | - | chr1_1:57750159-57750178 | Msa0031150:CDS | 40.0% | |
| TCGTTGTTAACTTCTGGATC+GGG | + | chr1_1:57750199-57750218 | None:intergenic | 40.0% | |
| TCTGCATCGTTGTTAACTTC+TGG | + | chr1_1:57750205-57750224 | None:intergenic | 40.0% | |
| GACTTCATTGGAATTGATCG+CGG | + | chr1_1:57750239-57750258 | None:intergenic | 40.0% | |
| ATTGGTACCAACGACTTCAT+TGG | + | chr1_1:57750251-57750270 | None:intergenic | 40.0% | |
| !!! | TCTTTTTTCAGCTGAGGATG+CGG | + | chr1_1:57750280-57750299 | None:intergenic | 40.0% |
| !!! | CCTTCATCTTTTTTCAGCTG+AGG | + | chr1_1:57750286-57750305 | None:intergenic | 40.0% |
| CCTCAGCTGAAAAAAGATGA+AGG | - | chr1_1:57750283-57750302 | Msa0031150:intron | 40.0% | |
| ACCATGAGAGAATTGCTTCA+TGG | - | chr1_1:57750319-57750338 | Msa0031150:intron | 40.0% | |
| TCCATGAAGCAATTCTCTCA+TGG | + | chr1_1:57750323-57750342 | None:intergenic | 40.0% | |
| GAGCTAACATCTTCTCTTTC+GGG | + | chr1_1:57750364-57750383 | None:intergenic | 40.0% | |
| ! | AAGATGTTAGCTCTCCTTAC+AGG | - | chr1_1:57750371-57750390 | Msa0031150:intron | 40.0% |
| AGAACAGAACAATGCTGCTA+TGG | - | chr1_1:57751182-57751201 | Msa0031150:CDS | 40.0% | |
| !! | GAGTTGATAAACAGCGTTGT+AGG | - | chr1_1:57751204-57751223 | Msa0031150:CDS | 40.0% |
| ! | TTCTTACATTTGCTGCCAAG+AGG | - | chr1_1:57751259-57751278 | Msa0031150:CDS | 40.0% |
| GTAGAACCTAGAAGTGATTG+TGG | + | chr1_1:57751287-57751306 | None:intergenic | 40.0% | |
| CATAACATATTCCTAGCGGT+AGG | + | chr1_1:57751309-57751328 | None:intergenic | 40.0% | |
| !!! | CTGATTTGCTTTTGCTTCTC+AGG | - | chr1_1:57751381-57751400 | Msa0031150:intron | 40.0% |
| ! | TCAGTTAATAGTTGGTGCCT+TGG | - | chr1_1:57751686-57751705 | Msa0031150:CDS | 40.0% |
| ! | CAGTTAATAGTTGGTGCCTT+GGG | - | chr1_1:57751687-57751706 | Msa0031150:CDS | 40.0% |
| TTTAATGATTCCAGCTCCCA+AGG | + | chr1_1:57751706-57751725 | None:intergenic | 40.0% | |
| AAAAAGAGGGGTTTAGAAGG+AGG | - | chr1_1:57751751-57751770 | Msa0031150:CDS | 40.0% | |
| ATTTGAGAGTTGGGTCCTTT+GGG | - | chr1_1:57751785-57751804 | Msa0031150:intron | 40.0% | |
| ! | TGGTATTGAAGCTCTGTTCT+TGG | - | chr1_1:57751836-57751855 | Msa0031150:intron | 40.0% |
| ! | GTGTTATTGATTGCGAATGG+TGG | - | chr1_1:57752077-57752096 | Msa0031150:intron | 40.0% |
| CTGCTATAGCCAATTTGTGA+AGG | + | chr1_1:57752175-57752194 | None:intergenic | 40.0% | |
| CACAAATTGGCTATAGCAGT+TGG | - | chr1_1:57752176-57752195 | Msa0031150:intron | 40.0% | |
| AGTTGGCAAGTATTCTGTCA+TGG | - | chr1_1:57752193-57752212 | Msa0031150:intron | 40.0% | |
| TAATAAGGGCCAGTTTGGAT+TGG | + | chr1_1:57752484-57752503 | None:intergenic | 40.0% | |
| CAAACTGGCCCTTATTAGTT+CGG | - | chr1_1:57752487-57752506 | Msa0031150:intron | 40.0% | |
| AAACTGGCCCTTATTAGTTC+GGG | - | chr1_1:57752488-57752507 | Msa0031150:intron | 40.0% | |
| TTGTAGCCCCGAACTAATAA+GGG | + | chr1_1:57752498-57752517 | None:intergenic | 40.0% | |
| TTTGTAGCCCCGAACTAATA+AGG | + | chr1_1:57752499-57752518 | None:intergenic | 40.0% | |
| GTTCGGGGCTACAAATAATT+AGG | - | chr1_1:57752504-57752523 | Msa0031150:intron | 40.0% | |
| ! | CAACCCCTCTTCTTATTTGT+AGG | + | chr1_1:57752545-57752564 | None:intergenic | 40.0% |
| !! | ATTTTGAGAGTTGAGGCCAT+TGG | - | chr1_1:57752588-57752607 | Msa0031150:intron | 40.0% |
| !! | TTTTGAGAGTTGAGGCCATT+GGG | - | chr1_1:57752589-57752608 | Msa0031150:intron | 40.0% |
| TTAGAAGGTGAAGTGGAATC+TGG | + | chr1_1:57752983-57753002 | None:intergenic | 40.0% | |
| ! | AGCATCTTTAGAAGGTGAAG+TGG | + | chr1_1:57752990-57753009 | None:intergenic | 40.0% |
| ! | TCAAGCAGAGCATCTTTAGA+AGG | + | chr1_1:57752998-57753017 | None:intergenic | 40.0% |
| ! | TTCTAAAGATGCTCTGCTTG+AGG | - | chr1_1:57752997-57753016 | Msa0031150:intron | 40.0% |
| ! | GTACTTTTCACAGAGAACGA+TGG | - | chr1_1:57753771-57753790 | Msa0031150:intron | 40.0% |
| GTATCCAGGCTTACTACAAT+TGG | - | chr1_1:57753840-57753859 | Msa0031150:intron | 40.0% | |
| AAGAGCTATGGAAACAGGTT+AGG | - | chr1_1:57753915-57753934 | Msa0031150:intron | 40.0% | |
| TTACGCATATTTAGGCTCTG+GGG | - | chr1_1:57753971-57753990 | Msa0031150:intron | 40.0% | |
| TTAAAGCAGTCCAACTCAAC+TGG | - | chr1_1:57754176-57754195 | Msa0031150:intron | 40.0% | |
| TTAGCGTCTTCTTGTTGAAC+TGG | - | chr1_1:57754241-57754260 | Msa0031150:intron | 40.0% | |
| TCGATGAGAGTCAGTAAAAG+GGG | + | chr1_1:57754389-57754408 | None:intergenic | 40.0% | |
| TTTCAGGCGCTTAATAACTG+GGG | - | chr1_1:57754414-57754433 | Msa0031150:intron | 40.0% | |
| AAAGCTCCAGCTCATAGAAA+AGG | + | chr1_1:57754680-57754699 | None:intergenic | 40.0% | |
| TTCAAACACTAGGTGTGACT+GGG | - | chr1_1:57754924-57754943 | Msa0031150:intron | 40.0% | |
| TATGGATCAGTCAATGCCAT+TGG | - | chr1_1:57754950-57754969 | Msa0031150:intron | 40.0% | |
| ! | TAATGGTTTCTCCGTTTTCG+CGG | - | chr1_1:57755031-57755050 | Msa0031150:intron | 40.0% |
| GGTACTGTGTAATCTTGGAA+GGG | + | chr1_1:57755229-57755248 | None:intergenic | 40.0% | |
| ! | AGGTACTGTGTAATCTTGGA+AGG | + | chr1_1:57755230-57755249 | None:intergenic | 40.0% |
| !! | GACAAGGTACTGTGTAATCT+TGG | + | chr1_1:57755234-57755253 | None:intergenic | 40.0% |
| AGTGTGAAATTCAAGAGGGT+TGG | + | chr1_1:57755446-57755465 | None:intergenic | 40.0% | |
| CCGAGTCTTGAAATACTATC+AGG | + | chr1_1:57755532-57755551 | None:intergenic | 40.0% | |
| AGAATTGGATGAGCTAGTAG+TGG | + | chr1_1:57755623-57755642 | None:intergenic | 40.0% | |
| ! | TTGACCAAATTTTACACGGC+TGG | + | chr1_1:57755797-57755816 | None:intergenic | 40.0% |
| GGTGTCAGTCAAGTTTATGT+TGG | - | chr1_1:57755823-57755842 | Msa0031150:intron | 40.0% | |
| GCCAATTGTGGGTTTATTGT+TGG | - | chr1_1:57755983-57756002 | Msa0031150:intron | 40.0% | |
| GCCTCTTACAAATGCAAATC+AGG | + | chr1_1:57756012-57756031 | None:intergenic | 40.0% | |
| GATTTGCATTTGTAAGAGGC+TGG | - | chr1_1:57756012-57756031 | Msa0031150:intron | 40.0% | |
| GCCAATTGTGGGTTTATTGT+TGG | - | chr1_1:57755983-57756002 | Msa0031150:intron | 40.0% | |
| GCCTCTTACAAATGCAAATC+AGG | + | chr1_1:57756012-57756031 | None:intergenic | 40.0% | |
| GATTTGCATTTGTAAGAGGC+TGG | - | chr1_1:57756012-57756031 | Msa0031150:intron | 40.0% | |
| ! | ATGGCACTGAGTTCCTAAAT+TGG | + | chr1_1:57756374-57756393 | None:intergenic | 40.0% |
| !!! | ATTTTTTGCTTCTCTCGAGC+AGG | + | chr1_1:57756401-57756420 | None:intergenic | 40.0% |
| CGGAACTGCATTGAAGAATA+AGG | + | chr1_1:57756543-57756562 | None:intergenic | 40.0% | |
| ATTGCAACTGTATGGCTGAA+CGG | + | chr1_1:57756563-57756582 | None:intergenic | 40.0% | |
| ! | GTTGCAATTTGATTTCCACC+GGG | - | chr1_1:57756575-57756594 | Msa0031150:intron | 40.0% |
| !! | TTTACAGTACGGATTAGCAG+AGG | - | chr1_1:57756738-57756757 | Msa0031150:intron | 40.0% |
| ! | CAGAGGACACTTTAAGAACA+GGG | - | chr1_1:57756755-57756774 | Msa0031150:intron | 40.0% |
| ! | AGAGGACACTTTAAGAACAG+GGG | - | chr1_1:57756756-57756775 | Msa0031150:intron | 40.0% |
| !!! | GCCCATAATTTTTTGGTGTG+TGG | - | chr1_1:57757040-57757059 | Msa0031150:CDS | 40.0% |
| TAGTTGCACCTCATAATGAC+TGG | - | chr1_1:57757276-57757295 | Msa0031150:intron | 40.0% | |
| GATCGTTTCCAGTCATTATG+AGG | + | chr1_1:57757287-57757306 | None:intergenic | 40.0% | |
| CATGAACTGTATCAATGCAG+AGG | + | chr1_1:57757629-57757648 | None:intergenic | 40.0% | |
| ! | CTCTGCATTGATACAGTTCA+TGG | - | chr1_1:57757627-57757646 | Msa0031150:intron | 40.0% |
| !! | CTTCCTTCTACACTTGTTGT+AGG | - | chr1_1:57757714-57757733 | Msa0031150:intron | 40.0% |
| CAACCTACAACAAGTGTAGA+AGG | + | chr1_1:57757720-57757739 | None:intergenic | 40.0% | |
| AGAACAAGCCATCGCAAAAA+TGG | + | chr1_1:57757905-57757924 | None:intergenic | 40.0% | |
| ! | CTCTTGTTGTGCTGTTGAAA+TGG | - | chr1_1:57757997-57758016 | Msa0031150:intron | 40.0% |
| ! | TTGTTGTGCTGTTGAAATGG+TGG | - | chr1_1:57758000-57758019 | Msa0031150:intron | 40.0% |
| GCTAAACCCTATGTATTTCC+TGG | - | chr1_1:57758088-57758107 | Msa0031150:intron | 40.0% | |
| AGTCACCCAGGAAATACATA+GGG | + | chr1_1:57758097-57758116 | None:intergenic | 40.0% | |
| !! | TTACATTGGTGTTGAGTCAG+GGG | + | chr1_1:57758124-57758143 | None:intergenic | 40.0% |
| !! | TTAACAAGGTTGCTGACTCT+TGG | - | chr1_1:57758291-57758310 | Msa0031150:CDS | 40.0% |
| !! | TAACAAGGTTGCTGACTCTT+GGG | - | chr1_1:57758292-57758311 | Msa0031150:CDS | 40.0% |
| GTCTACACTATTTATGTGCG+AGG | - | chr1_1:57758350-57758369 | Msa0031150:CDS | 40.0% | |
| AGGCAAAAGTGATGTATTGG+CGG | - | chr1_1:57758370-57758389 | Msa0031150:CDS | 40.0% | |
| ! | GTATTGGCGGGTATTATAAC+AGG | - | chr1_1:57758383-57758402 | Msa0031150:CDS | 40.0% |
| ! | AGTTCGCAGAGAAGTGTAAA+AGG | + | chr1_1:57758476-57758495 | None:intergenic | 40.0% |
| ATGATGAATTGGGGAGAGGA+AGG | + | chr1_1:57749977-57749996 | None:intergenic | 45.0% | |
| TGGAATGATGAATTGGGGAG+AGG | + | chr1_1:57749981-57750000 | None:intergenic | 45.0% | |
| !! | TCGGGTTTTGATCCAGATTC+CGG | + | chr1_1:57750181-57750200 | None:intergenic | 45.0% |
| GGTTCAGAGGAAAACCTGTA+AGG | + | chr1_1:57750388-57750407 | None:intergenic | 45.0% | |
| CTGATCAAAGATGTTGTGGC+CGG | - | chr1_1:57750511-57750530 | Msa0031150:intron | 45.0% | |
| ACTGTGTTGGACCATCCATA+CGG | - | chr1_1:57750772-57750791 | Msa0031150:intron | 45.0% | |
| GTTCATACATGGCTTTCCTC+TGG | - | chr1_1:57750826-57750845 | Msa0031150:intron | 45.0% | |
| ! | GCTTTCCTCTGGCTTCAATA+CGG | - | chr1_1:57750837-57750856 | Msa0031150:intron | 45.0% |
| CTAATCCCACAGTCTAGAAG+CGG | + | chr1_1:57750867-57750886 | None:intergenic | 45.0% | |
| ! | GCTGTTGCTGTTGACTATCT+TGG | + | chr1_1:57751158-57751177 | None:intergenic | 45.0% |
| !! | GTTGTAGGTGTTGATGAGGA+GGG | - | chr1_1:57751219-57751238 | Msa0031150:CDS | 45.0% |
| !! | TTGTAGGTGTTGATGAGGAG+GGG | - | chr1_1:57751220-57751239 | Msa0031150:CDS | 45.0% |
| GAAGTGATTGTGGTACCTCT+TGG | + | chr1_1:57751277-57751296 | None:intergenic | 45.0% | |
| ! | GAGGTACCACAATCACTTCT+AGG | - | chr1_1:57751278-57751297 | Msa0031150:CDS | 45.0% |
| ATTAGGAACCCTCCCTATCA+TGG | - | chr1_1:57751349-57751368 | Msa0031150:intron | 45.0% | |
| TGCACTGTACAATTGGGCAT+TGG | - | chr1_1:57751494-57751513 | Msa0031150:intron | 45.0% | |
| !! | CAATTGGGCATTGGTACTTC+AGG | - | chr1_1:57751503-57751522 | Msa0031150:intron | 45.0% |
| CATTTGAGAGTTGGGTCCTT+TGG | - | chr1_1:57751784-57751803 | Msa0031150:intron | 45.0% | |
| TTGGTAAGAGAGGATGCATG+TGG | - | chr1_1:57751990-57752009 | Msa0031150:intron | 45.0% | |
| TAAGAGAGGATGCATGTGGA+TGG | - | chr1_1:57751994-57752013 | Msa0031150:intron | 45.0% | |
| !! | GAATGGTGGATCATGACAGA+AGG | - | chr1_1:57752091-57752110 | Msa0031150:CDS | 45.0% |
| AGACAGAGTTAGAGCCTGTT+TGG | - | chr1_1:57752256-57752275 | Msa0031150:intron | 45.0% | |
| CGAACTAATAAGGGCCAGTT+TGG | + | chr1_1:57752489-57752508 | None:intergenic | 45.0% | |
| AACTGGCCCTTATTAGTTCG+GGG | - | chr1_1:57752489-57752508 | Msa0031150:intron | 45.0% | |
| TAAGAAGAGGGGTTGTTGAG+AGG | - | chr1_1:57752550-57752569 | Msa0031150:intron | 45.0% | |
| AAGAAGAGGGGTTGTTGAGA+GGG | - | chr1_1:57752551-57752570 | Msa0031150:intron | 45.0% | |
| ATAAACCTCCCTATGCCCAA+TGG | + | chr1_1:57752607-57752626 | None:intergenic | 45.0% | |
| ATTGGGCATAGGGAGGTTTA+TGG | - | chr1_1:57752606-57752625 | Msa0031150:intron | 45.0% | |
| GCAGCATTGCGAAATTTCGA+AGG | + | chr1_1:57752633-57752652 | None:intergenic | 45.0% | |
| TGTTTGCATGCAGGAAAGTG+CGG | - | chr1_1:57752946-57752965 | Msa0031150:intron | 45.0% | |
| CATCATGTAGTGTGGGACAA+AGG | + | chr1_1:57753054-57753073 | None:intergenic | 45.0% | |
| !!! | CTAGTATTTTAGCTGTGCCC+AGG | + | chr1_1:57753169-57753188 | None:intergenic | 45.0% |
| TAAGCCTGGATACAGTCAGA+CGG | + | chr1_1:57753833-57753852 | None:intergenic | 45.0% | |
| TTGCCCAATTGTAGTAAGCC+TGG | + | chr1_1:57753847-57753866 | None:intergenic | 45.0% | |
| CAAAGGAAGCTGAAGAGCTA+TGG | - | chr1_1:57753903-57753922 | Msa0031150:intron | 45.0% | |
| AGCTGAAGAGCTATGGAAAC+AGG | - | chr1_1:57753910-57753929 | Msa0031150:intron | 45.0% | |
| AACATAGTTCCCTGTTGCCT+GGG | + | chr1_1:57754158-57754177 | None:intergenic | 45.0% | |
| TAACATAGTTCCCTGTTGCC+TGG | + | chr1_1:57754159-57754178 | None:intergenic | 45.0% | |
| !!! | GAGCTGGAGCTTTTAACTTC+TGG | - | chr1_1:57754687-57754706 | Msa0031150:intron | 45.0% |
| GTTCAAACACTAGGTGTGAC+TGG | - | chr1_1:57754923-57754942 | Msa0031150:intron | 45.0% | |
| TCAAACACTAGGTGTGACTG+GGG | - | chr1_1:57754925-57754944 | Msa0031150:intron | 45.0% | |
| ! | AATGGTTTCTCCGTTTTCGC+GGG | - | chr1_1:57755032-57755051 | Msa0031150:intron | 45.0% |
| ! | GGGAGCTTACAAGAGGTTTT+AGG | + | chr1_1:57755139-57755158 | None:intergenic | 45.0% |
| GGGTGCCAAAAACATCCTAT+TGG | - | chr1_1:57755550-57755569 | Msa0031150:intron | 45.0% | |
| AGTGCCAGCCGTGTAAAATT+TGG | - | chr1_1:57755790-57755809 | Msa0031150:intron | 45.0% | |
| AAGGAAGGGTTGCCAATTGT+GGG | - | chr1_1:57755972-57755991 | Msa0031150:intron | 45.0% | |
| AAGGAAGGGTTGCCAATTGT+GGG | - | chr1_1:57755972-57755991 | Msa0031150:intron | 45.0% | |
| CAATATTTGAAGGGGAGCCT+TGG | + | chr1_1:57756273-57756292 | None:intergenic | 45.0% | |
| TGTACGAACTGCTATCAGCA+AGG | - | chr1_1:57756421-57756440 | Msa0031150:intron | 45.0% | |
| CAAGATTGTAAATTGCCCGG+TGG | + | chr1_1:57756593-57756612 | None:intergenic | 45.0% | |
| CACCGGGCAATTTACAATCT+TGG | - | chr1_1:57756591-57756610 | Msa0031150:intron | 45.0% | |
| CATGTTACGCTCTGTTGTCT+TGG | - | chr1_1:57756661-57756680 | Msa0031150:intron | 45.0% | |
| ! | GCAGAGGACACTTTAAGAAC+AGG | - | chr1_1:57756754-57756773 | Msa0031150:intron | 45.0% |
| ! | GAGGACACTTTAAGAACAGG+GGG | - | chr1_1:57756757-57756776 | Msa0031150:intron | 45.0% |
| ! | AGGACACTTTAAGAACAGGG+GGG | - | chr1_1:57756758-57756777 | Msa0031150:intron | 45.0% |
| AGGTATATAGCAGTGCCTTG+CGG | - | chr1_1:57757064-57757083 | Msa0031150:intron | 45.0% | |
| !! | CCAACTTTAAGGTGTGGTAG+CGG | + | chr1_1:57757227-57757246 | None:intergenic | 45.0% |
| ATATTTAACCGCACCTCCTG+CGG | - | chr1_1:57757247-57757266 | Msa0031150:intron | 45.0% | |
| CGAAAAGCTTCAGCAGGTAA+TGG | - | chr1_1:57757325-57757344 | Msa0031150:intron | 45.0% | |
| ATTGGATAACCTCTAGGCTC+TGG | - | chr1_1:57757398-57757417 | Msa0031150:intron | 45.0% | |
| TTTCTCATACCAGAGCCTAG+AGG | + | chr1_1:57757410-57757429 | None:intergenic | 45.0% | |
| TTACATTCCTCCCTTCGTAC+AGG | - | chr1_1:57757452-57757471 | Msa0031150:intron | 45.0% | |
| CAAAGTCTCTCAACCAGATC+AGG | - | chr1_1:57757504-57757523 | Msa0031150:intron | 45.0% | |
| ATTCATGGCATCTCCTGATC+TGG | + | chr1_1:57757520-57757539 | None:intergenic | 45.0% | |
| AGATCAGGAGATGCCATGAA+TGG | - | chr1_1:57757519-57757538 | Msa0031150:intron | 45.0% | |
| GATCAGGAGATGCCATGAAT+GGG | - | chr1_1:57757520-57757539 | Msa0031150:intron | 45.0% | |
| ATCAGGAGATGCCATGAATG+GGG | - | chr1_1:57757521-57757540 | Msa0031150:intron | 45.0% | |
| GTTACAAGTTGTTGGGACTG+CGG | + | chr1_1:57757867-57757886 | None:intergenic | 45.0% | |
| GCACACCGTGCTTTGATATA+AGG | - | chr1_1:57758066-57758085 | Msa0031150:intron | 45.0% | |
| CAGTCACCCAGGAAATACAT+AGG | + | chr1_1:57758098-57758117 | None:intergenic | 45.0% | |
| CTATGTATTTCCTGGGTGAC+TGG | - | chr1_1:57758096-57758115 | Msa0031150:intron | 45.0% | |
| !! | TACATTGGTGTTGAGTCAGG+GGG | + | chr1_1:57758123-57758142 | None:intergenic | 45.0% |
| !! | TGCTGACTCTTGGGAATCAT+TGG | - | chr1_1:57758301-57758320 | Msa0031150:CDS | 45.0% |
| GACTCTTGGGAATCATTGGA+TGG | - | chr1_1:57758305-57758324 | Msa0031150:CDS | 45.0% | |
| CTTGGGAATCATTGGATGGA+TGG | - | chr1_1:57758309-57758328 | Msa0031150:CDS | 45.0% | |
| GCGAGGCAAAAGTGATGTAT+TGG | - | chr1_1:57758367-57758386 | Msa0031150:CDS | 45.0% | |
| ! | GGCAAAAGTGATGTATTGGC+GGG | - | chr1_1:57758371-57758390 | Msa0031150:CDS | 45.0% |
| ACACGCAAACACAGTAGACG+CGG | + | chr1_1:57749937-57749956 | None:intergenic | 50.0% | |
| GGAGAGGAAGGAGTTTCGAT+CGG | + | chr1_1:57749965-57749984 | None:intergenic | 50.0% | |
| ! | TGAGATTGTGGTTCGGGTGA+TGG | + | chr1_1:57750055-57750074 | None:intergenic | 50.0% |
| ATCACCCGAACCACAATCTC+AGG | - | chr1_1:57750054-57750073 | Msa0031150:three_prime_UTR | 50.0% | |
| TCCGTCCTGAGATTGTGGTT+CGG | + | chr1_1:57750062-57750081 | None:intergenic | 50.0% | |
| !! | TCGGTTTCTGGTTGAGGATC+AGG | + | chr1_1:57750118-57750137 | None:intergenic | 50.0% |
| !! | TCTGGTTCGGTTTCTGGTTG+AGG | + | chr1_1:57750124-57750143 | None:intergenic | 50.0% |
| !! | GGTTGTTCTGGTTCGGTTTC+TGG | + | chr1_1:57750130-57750149 | None:intergenic | 50.0% |
| GTACAACTGGAACCGGAATC+TGG | - | chr1_1:57750166-57750185 | Msa0031150:CDS | 50.0% | |
| CTGAGGATGCGGTGAAGAAT+TGG | + | chr1_1:57750269-57750288 | None:intergenic | 50.0% | |
| !! | CAACGTGTCGGTTGTGTTAG+TGG | - | chr1_1:57750600-57750619 | Msa0031150:intron | 50.0% |
| !! | AGAGCAAAGCACCGTATGGA+TGG | + | chr1_1:57750786-57750805 | None:intergenic | 50.0% |
| ATCCATACGGTGCTTTGCTC+TGG | - | chr1_1:57750785-57750804 | Msa0031150:intron | 50.0% | |
| !! | TAGACTGTGGGATTAGTCCC+CGG | - | chr1_1:57750871-57750890 | Msa0031150:CDS | 50.0% |
| !! | GATTAGTCCCCGGATTAGTC+CGG | - | chr1_1:57750881-57750900 | Msa0031150:CDS | 50.0% |
| !! | CAGCGTTGTAGGTGTTGATG+AGG | - | chr1_1:57751215-57751234 | Msa0031150:CDS | 50.0% |
| !! | CGTTGTAGGTGTTGATGAGG+AGG | - | chr1_1:57751218-57751237 | Msa0031150:CDS | 50.0% |
| TCTAGGTTCTACCTACCGCT+AGG | - | chr1_1:57751295-57751314 | Msa0031150:intron | 50.0% | |
| CAGAAATCCCCGCCATGATA+GGG | + | chr1_1:57751364-57751383 | None:intergenic | 50.0% | |
| TCAGAAATCCCCGCCATGAT+AGG | + | chr1_1:57751365-57751384 | None:intergenic | 50.0% | |
| ! | TGCTTTTGCTTCTCAGGGAC+AGG | - | chr1_1:57751387-57751406 | Msa0031150:intron | 50.0% |
| ! | GCTTTTGCTTCTCAGGGACA+GGG | - | chr1_1:57751388-57751407 | Msa0031150:intron | 50.0% |
| ! | CTTTTGCTTCTCAGGGACAG+GGG | - | chr1_1:57751389-57751408 | Msa0031150:intron | 50.0% |
| GGTATGCTGCTGCTATTGAG+AGG | - | chr1_1:57751454-57751473 | Msa0031150:intron | 50.0% | |
| AAGCTCTGTTCTTGGAGCTG+CGG | - | chr1_1:57751844-57751863 | Msa0031150:intron | 50.0% | |
| ! | GGCAGCATGGTGTTTTATGG+TGG | + | chr1_1:57752147-57752166 | None:intergenic | 50.0% |
| ! | GGTGGCAGCATGGTGTTTTA+TGG | + | chr1_1:57752150-57752169 | None:intergenic | 50.0% |
| TGCCACCGTCCTTCACAAAT+TGG | - | chr1_1:57752163-57752182 | Msa0031150:intron | 50.0% | |
| AGCCAATTTGTGAAGGACGG+TGG | + | chr1_1:57752168-57752187 | None:intergenic | 50.0% | |
| AGTTGAGGCCATTGGGCATA+GGG | - | chr1_1:57752596-57752615 | Msa0031150:intron | 50.0% | |
| AAATGAGCCGATAGCATGCC+TGG | - | chr1_1:57753148-57753167 | Msa0031150:intron | 50.0% | |
| AATGAGCCGATAGCATGCCT+GGG | - | chr1_1:57753149-57753168 | Msa0031150:intron | 50.0% | |
| GAGGGTCTGCAAACATATGC+AGG | - | chr1_1:57753261-57753280 | Msa0031150:intron | 50.0% | |
| AATCCCGTCTGACTGTATCC+AGG | - | chr1_1:57753826-57753845 | Msa0031150:intron | 50.0% | |
| AAGCCTGGATACAGTCAGAC+GGG | + | chr1_1:57753832-57753851 | None:intergenic | 50.0% | |
| TCTGATCGTGCAAAGATGCG+AGG | - | chr1_1:57753875-57753894 | Msa0031150:intron | 50.0% | |
| GCTCTTCAGCTTCCTTTGTG+CGG | + | chr1_1:57753901-57753920 | None:intergenic | 50.0% | |
| GAGGACTGTTCCAGTTGAGT+TGG | + | chr1_1:57754189-57754208 | None:intergenic | 50.0% | |
| ACTCAACTGGAACAGTCCTC+AGG | - | chr1_1:57754189-57754208 | Msa0031150:intron | 50.0% | |
| CTAGGTGTGACTGGGGTATA+TGG | - | chr1_1:57754932-57754951 | Msa0031150:intron | 50.0% | |
| GGCATATGGGAGCTTACAAG+AGG | + | chr1_1:57755146-57755165 | None:intergenic | 50.0% | |
| CAAGGAAGGGTTGCCAATTG+TGG | - | chr1_1:57755971-57755990 | Msa0031150:intron | 50.0% | |
| CAAGGAAGGGTTGCCAATTG+TGG | - | chr1_1:57755971-57755990 | Msa0031150:intron | 50.0% | |
| CTTCTCTCGAGCAGGAACAA+TGG | + | chr1_1:57756393-57756412 | None:intergenic | 50.0% | |
| ATATAGCAGTGCCTTGCGGT+TGG | - | chr1_1:57757068-57757087 | Msa0031150:intron | 50.0% | |
| CATAGATCGTACCAACCGCA+AGG | + | chr1_1:57757082-57757101 | None:intergenic | 50.0% | |
| ! | CTTGCGGTTGGTACGATCTA+TGG | - | chr1_1:57757080-57757099 | Msa0031150:intron | 50.0% |
| CCGCTACCACACCTTAAAGT+TGG | - | chr1_1:57757224-57757243 | Msa0031150:intron | 50.0% | |
| TATTTAACCGCACCTCCTGC+GGG | - | chr1_1:57757248-57757267 | Msa0031150:intron | 50.0% | |
| GGATCACGAAAAGCTTCAGC+AGG | - | chr1_1:57757319-57757338 | Msa0031150:intron | 50.0% | |
| ACTCTGGGTACCTGTACGAA+GGG | + | chr1_1:57757465-57757484 | None:intergenic | 50.0% | |
| AACTCTGGGTACCTGTACGA+AGG | + | chr1_1:57757466-57757485 | None:intergenic | 50.0% | |
| AGGTACCCAGAGTTGAACAG+AGG | - | chr1_1:57757472-57757491 | Msa0031150:intron | 50.0% | |
| GCTTGCCTCTGTTCAACTCT+GGG | + | chr1_1:57757480-57757499 | None:intergenic | 50.0% | |
| TGCTTGCCTCTGTTCAACTC+TGG | + | chr1_1:57757481-57757500 | None:intergenic | 50.0% | |
| TGGTGGAAACAGACCCTTGA+TGG | - | chr1_1:57758017-57758036 | Msa0031150:intron | 50.0% | |
| !! | ACATTGGTGTTGAGTCAGGG+GGG | + | chr1_1:57758122-57758141 | None:intergenic | 50.0% |
| GGAATCATTGGATGGATGGC+TGG | - | chr1_1:57758313-57758332 | Msa0031150:CDS | 50.0% | |
| ACGCAAACACAGTAGACGCG+GGG | + | chr1_1:57749935-57749954 | None:intergenic | 55.0% | |
| CACGCAAACACAGTAGACGC+GGG | + | chr1_1:57749936-57749955 | None:intergenic | 55.0% | |
| ! | TGTGGTTCGGGTGATGGTTG+AGG | + | chr1_1:57750049-57750068 | None:intergenic | 55.0% |
| CCGTCCTGAGATTGTGGTTC+GGG | + | chr1_1:57750061-57750080 | None:intergenic | 55.0% | |
| CCCGAACCACAATCTCAGGA+CGG | - | chr1_1:57750058-57750077 | Msa0031150:three_prime_UTR | 55.0% | |
| ! | CACATGTCAGTGTCGGACAC+CGG | + | chr1_1:57750533-57750552 | None:intergenic | 55.0% |
| !! | AGCCAGAGCAAAGCACCGTA+TGG | + | chr1_1:57750790-57750809 | None:intergenic | 55.0% |
| GAGGACCGTATTGAAGCCAG+AGG | + | chr1_1:57750845-57750864 | None:intergenic | 55.0% | |
| GTCCTCCGCTTCTAGACTGT+GGG | - | chr1_1:57750859-57750878 | Msa0031150:intron | 55.0% | |
| ATCCCACAGTCTAGAAGCGG+AGG | + | chr1_1:57750864-57750883 | None:intergenic | 55.0% | |
| TGCCCAAAGCCGGACTAATC+CGG | + | chr1_1:57750893-57750912 | None:intergenic | 55.0% | |
| !! | TAGGTGTTGATGAGGAGGGG+CGG | - | chr1_1:57751223-57751242 | Msa0031150:CDS | 55.0% |
| AGGAACCCTCCCTATCATGG+CGG | - | chr1_1:57751352-57751371 | Msa0031150:intron | 55.0% | |
| AATCCCCGCCATGATAGGGA+GGG | + | chr1_1:57751360-57751379 | None:intergenic | 55.0% | |
| AAATCCCCGCCATGATAGGG+AGG | + | chr1_1:57751361-57751380 | None:intergenic | 55.0% | |
| ! | ATAGTTGGTGCCTTGGGAGC+TGG | - | chr1_1:57751693-57751712 | Msa0031150:CDS | 55.0% |
| AGCTCTGTTCTTGGAGCTGC+GGG | - | chr1_1:57751845-57751864 | Msa0031150:intron | 55.0% | |
| GAGTTGAGGCCATTGGGCAT+AGG | - | chr1_1:57752595-57752614 | Msa0031150:intron | 55.0% | |
| TAGTGTGGGACAAAGGCGAG+TGG | + | chr1_1:57753047-57753066 | None:intergenic | 55.0% | |
| AAAGATGCGAGGCCGCACAA+AGG | - | chr1_1:57753886-57753905 | Msa0031150:intron | 55.0% | |
| TAACTGGGGACTTGCGCTTC+AGG | - | chr1_1:57754428-57754447 | Msa0031150:intron | 55.0% | |
| TGCGTGTAGACCCGCGAAAA+CGG | + | chr1_1:57755045-57755064 | None:intergenic | 55.0% | |
| ATTTAACCGCACCTCCTGCG+GGG | - | chr1_1:57757249-57757268 | Msa0031150:intron | 55.0% | |
| GCTGATCTGACTTTGCCTCC+TGG | - | chr1_1:57757597-57757616 | Msa0031150:intron | 55.0% | |
| AGTTGTTGGGACTGCGGAAG+TGG | + | chr1_1:57757861-57757880 | None:intergenic | 55.0% | |
| CAAAGCACGGTGTGCACTAC+TGG | + | chr1_1:57758061-57758080 | None:intergenic | 55.0% | |
| CAAACACAGTAGACGCGGGG+AGG | + | chr1_1:57749932-57749951 | None:intergenic | 60.0% | |
| GGTGCTCCGTCCTGAGATTG+TGG | + | chr1_1:57750067-57750086 | None:intergenic | 60.0% | |
| GGTCCTCCGCTTCTAGACTG+TGG | - | chr1_1:57750858-57750877 | Msa0031150:intron | 60.0% | |
| !! | TCCCCGGATTAGTCCGGCTT+TGG | - | chr1_1:57750887-57750906 | Msa0031150:CDS | 60.0% |
| CCCAAAGCCGGACTAATCCG+GGG | + | chr1_1:57750891-57750910 | None:intergenic | 60.0% | |
| !! | CCCCGGATTAGTCCGGCTTT+GGG | - | chr1_1:57750888-57750907 | Msa0031150:CDS | 60.0% |
| GCCCAAAGCCGGACTAATCC+GGG | + | chr1_1:57750892-57750911 | None:intergenic | 60.0% | |
| !! | GGATTAGTCCGGCTTTGGGC+AGG | - | chr1_1:57750892-57750911 | Msa0031150:CDS | 60.0% |
| CTCGGTATCCTGCCCAAAGC+CGG | + | chr1_1:57750903-57750922 | None:intergenic | 60.0% | |
| TTGATGAGGAGGGGCGGTCT+AGG | - | chr1_1:57751229-57751248 | Msa0031150:CDS | 60.0% | |
| GGAACCCTCCCTATCATGGC+GGG | - | chr1_1:57751353-57751372 | Msa0031150:intron | 60.0% | |
| GAACCCTCCCTATCATGGCG+GGG | - | chr1_1:57751354-57751373 | Msa0031150:intron | 60.0% | |
| GCTCTGTTCTTGGAGCTGCG+GGG | - | chr1_1:57751846-57751865 | Msa0031150:intron | 60.0% | |
| TGTGAAGGACGGTGGCAGCA+TGG | + | chr1_1:57752160-57752179 | None:intergenic | 60.0% | |
| TGAGGCCATTGGGCATAGGG+AGG | - | chr1_1:57752599-57752618 | Msa0031150:intron | 60.0% | |
| GCTGTGCCCAGGCATGCTAT+CGG | + | chr1_1:57753158-57753177 | None:intergenic | 60.0% | |
| TTTAACCGCACCTCCTGCGG+GGG | - | chr1_1:57757250-57757269 | Msa0031150:intron | 60.0% | |
| CTGGGTACCTGTACGAAGGG+AGG | + | chr1_1:57757462-57757481 | None:intergenic | 60.0% | |
| CTGACTTTGCCTCCTGGTGC+TGG | - | chr1_1:57757603-57757622 | Msa0031150:intron | 60.0% | |
| TCAATGCAGAGGCCAGCACC+AGG | + | chr1_1:57757618-57757637 | None:intergenic | 60.0% | |
| AGGAGGGGCGGTCTAGGCAA+CGG | - | chr1_1:57751235-57751254 | Msa0031150:CDS | 65.0% | |
| TATTGCCCCCGCAGGAGGTG+CGG | + | chr1_1:57757258-57757277 | None:intergenic | 65.0% | |
| GCAACTATTGCCCCCGCAGG+AGG | + | chr1_1:57757263-57757282 | None:intergenic | 65.0% | |
| GGTGCAACTATTGCCCCCGC+AGG | + | chr1_1:57757266-57757285 | None:intergenic | 65.0% | |
| ATGCAGAGGCCAGCACCAGG+AGG | + | chr1_1:57757615-57757634 | None:intergenic | 65.0% | |
| GTCAGGGGGGCCAGTCACCC+AGG | + | chr1_1:57758109-57758128 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 57749891 | 57758631 | 57749891 | ID=Msa0031150;Name=Msa0031150 |
| chr1_1 | mRNA | 57749891 | 57758631 | 57749891 | ID=Msa0031150-mRNA-1;Parent=Msa0031150;Name=Msa0031150-mRNA-1;_AED=0.16;_eAED=0.16;_QI=128|0.91|1|1|0.91|1|13|222|478 |
| chr1_1 | exon | 57749891 | 57750223 | 57749891 | ID=Msa0031150-mRNA-1:exon:17498;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57750860 | 57751048 | 57750860 | ID=Msa0031150-mRNA-1:exon:17497;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57751182 | 57751301 | 57751182 | ID=Msa0031150-mRNA-1:exon:17496;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57751421 | 57751456 | 57751421 | ID=Msa0031150-mRNA-1:exon:17495;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57751649 | 57751777 | 57751649 | ID=Msa0031150-mRNA-1:exon:17494;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57751899 | 57751964 | 57751899 | ID=Msa0031150-mRNA-1:exon:17493;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57752080 | 57752142 | 57752080 | ID=Msa0031150-mRNA-1:exon:17492;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57754073 | 57754102 | 57754073 | ID=Msa0031150-mRNA-1:exon:17491;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57754312 | 57754362 | 57754312 | ID=Msa0031150-mRNA-1:exon:17490;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57754591 | 57754674 | 57754591 | ID=Msa0031150-mRNA-1:exon:17489;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57755450 | 57755563 | 57755450 | ID=Msa0031150-mRNA-1:exon:17488;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57756998 | 57757067 | 57756998 | ID=Msa0031150-mRNA-1:exon:17487;Parent=Msa0031150-mRNA-1 |
| chr1_1 | exon | 57758130 | 57758631 | 57758130 | ID=Msa0031150-mRNA-1:exon:17486;Parent=Msa0031150-mRNA-1 |
| chr1_1 | five_prime_UTR | 57758504 | 57758631 | 57758504 | ID=Msa0031150-mRNA-1:five_prime_utr;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57758130 | 57758503 | 57758130 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57756998 | 57757067 | 57756998 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57755450 | 57755563 | 57755450 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57754591 | 57754674 | 57754591 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57754312 | 57754362 | 57754312 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57754073 | 57754102 | 57754073 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57752080 | 57752142 | 57752080 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57751899 | 57751964 | 57751899 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57751649 | 57751777 | 57751649 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57751421 | 57751456 | 57751421 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57751182 | 57751301 | 57751182 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57750860 | 57751048 | 57750860 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | CDS | 57750113 | 57750223 | 57750113 | ID=Msa0031150-mRNA-1:cds;Parent=Msa0031150-mRNA-1 |
| chr1_1 | three_prime_UTR | 57749891 | 57750112 | 57749891 | ID=Msa0031150-mRNA-1:three_prime_utr;Parent=Msa0031150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
