AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0031200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031200 MtrunA17_Chr1g0189171 96.863 1020 24 1 1 1020 1 1012 0.0 1927
Msa0031200 MtrunA17_Chr1g0189201 58.070 632 164 21 6 609 9 567 3.58e-155 471
Msa0031200 MtrunA17_Chr1g0189181 65.027 183 55 3 304 479 32 212 1.51e-56 194
Msa0031200 MtrunA17_Chr1g0189181 51.244 201 76 8 2 194 28 214 6.93e-33 127
Msa0031200 MtrunA17_Chr1g0189181 88.235 34 4 0 623 656 1 34 2.38e-11 64.7
Msa0031200 MtrunA17_Chr5g0447931 48.052 154 72 3 853 1005 37 183 3.07e-31 132
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031200 AT1G10390.3 57.419 1085 341 36 1 1013 1 1036 0.0 970
Msa0031200 AT1G10390.1 57.419 1085 341 36 1 1013 1 1036 0.0 970
Msa0031200 AT1G10390.2 57.419 1085 341 36 1 1013 1 1036 0.0 970
Msa0031200 AT1G59660.1 52.300 1065 384 34 1 1012 1 994 0.0 809
Msa0031200 AT1G59660.3 51.925 1065 381 34 1 1012 1 987 0.0 800
Msa0031200 AT1G59660.2 51.925 1065 381 34 1 1012 1 987 0.0 800
Msa0031200 AT1G80680.1 47.126 174 85 3 841 1014 31 197 8.47e-37 150

Find 362 sgRNAs with CRISPR-Local

Find 629 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTAGGTTTCACTCTATT+TGG 0.115098 1_1:+57901399 Msa0031200:five_prime_UTR
TCATTCTTGTATTTCCTTAT+AGG 0.125767 1_1:-57906340 None:intergenic
GGTCAGAATACCTCCCAATT+TGG 0.174042 1_1:+57904629 Msa0031200:CDS
GAACTTCCATTCTCCTTTAT+TGG 0.188439 1_1:-57908236 None:intergenic
AAGCACCAGTTTGCCCAAAT+TGG 0.194534 1_1:-57904643 None:intergenic
GCATTTGGAAGCAGCATATT+TGG 0.195207 1_1:+57903293 Msa0031200:CDS
GCAACCAGCACCCCAGCTTT+TGG 0.199572 1_1:+57903482 Msa0031200:CDS
AACAATACATTTCATAGTTT+TGG 0.203770 1_1:+57908363 Msa0031200:three_prime_UTR
GCCTCCAGCTCTCCTGCTTT+TGG 0.214621 1_1:+57903665 Msa0031200:CDS
TGAGAAGCTTACAGTGAAAT+TGG 0.231921 1_1:-57901183 None:intergenic
CATCAAGCACGCCTGCATTT+GGG 0.234663 1_1:+57903642 Msa0031200:CDS
GGGAGTACGACCTCTAATTT+TGG 0.244346 1_1:+57903776 Msa0031200:CDS
TCCTCTCCCATATTGTTATA+TGG 0.252327 1_1:-57908339 None:intergenic
GGTACTTCCACCGGTGTATT+TGG 0.252477 1_1:+57901908 Msa0031200:CDS
GTGCTGGTTGCACCGAAAGC+TGG 0.262885 1_1:-57903470 None:intergenic
TGTGCAAATGGGTTAGAATT+AGG 0.267243 1_1:-57904347 None:intergenic
AACTTCCATTCTCCTTTATT+GGG 0.268732 1_1:-57908235 None:intergenic
GTGCTGGTTGCCCCAAAAGC+TGG 0.268797 1_1:-57903494 None:intergenic
GTACTTCAATGCCGGCATTT+GGG 0.272314 1_1:+57901996 Msa0031200:CDS
GCTTCAAGCAGTCCTGTATT+TGG 0.277522 1_1:+57903617 Msa0031200:CDS
TCTAATGCTCCGACAGGTTT+TGG 0.279078 1_1:+57904734 Msa0031200:CDS
TCATCAAGCACGCCTGCATT+TGG 0.282285 1_1:+57903641 Msa0031200:CDS
TTTGGTCAGAAGCCTTCTTT+TGG 0.286295 1_1:+57903173 Msa0031200:CDS
TGCTGGTTGCACCGAAAGCT+GGG 0.291903 1_1:-57903469 None:intergenic
TAGGGGCAGAAGTGTTAAAT+AGG 0.292855 1_1:-57904586 None:intergenic
TGCTGGTTGCCCCAAAAGCT+GGG 0.297700 1_1:-57903493 None:intergenic
CACCCGCAACTGCTCCGTTT+GGG 0.300844 1_1:+57904459 Msa0031200:CDS
GGTACTTCAATGCCGGCATT+TGG 0.303504 1_1:+57901995 Msa0031200:CDS
GGTATTGGGCAGTCAGGATT+TGG 0.303970 1_1:+57903950 Msa0031200:CDS
GCTTCATCATCTCCAGCTTT+TGG 0.308542 1_1:+57901974 Msa0031200:CDS
ACAAATGCACAGTCTGGTTT+TGG 0.309202 1_1:+57904608 Msa0031200:CDS
GCAACCAGCACCCCTGCATT+TGG 0.309240 1_1:+57903506 Msa0031200:CDS
GCACCCAGCACCCCTGCTTT+TGG 0.309345 1_1:+57903410 Msa0031200:CDS
GCACCCAGCACCCCTGCTTT+TGG 0.309345 1_1:+57903434 Msa0031200:CDS
ACATGTCCCATATAACAATA+TGG 0.312202 1_1:+57908332 Msa0031200:three_prime_UTR
ACCACTGTGTTTGGTGGTGG+TGG 0.317969 1_1:+57903584 Msa0031200:CDS
TGCACCGAAAGCTGGGGTGC+TGG 0.321739 1_1:-57903462 None:intergenic
TTAGGGACTGCAGCTGAAAA+TGG 0.325573 1_1:+57907641 Msa0031200:intron
GGCTCGTCTCAATCCGTGTT+CGG 0.334608 1_1:+57901788 Msa0031200:CDS
TCTTTATATTTCCCGATTCT+CGG 0.335353 1_1:-57908160 None:intergenic
CCATTTGCACAAAAGACATT+TGG 0.344011 1_1:+57904359 Msa0031200:CDS
ACCTCCCAATTTGGGCAAAC+TGG 0.346514 1_1:+57904638 Msa0031200:CDS
GTCAGAATACCTCCCAATTT+GGG 0.347524 1_1:+57904630 Msa0031200:CDS
TGGAAAGTTGTAAGCATGTT+TGG 0.348227 1_1:+57901419 Msa0031200:exon
GCTTTCTCAGAAGTCCTTCC+AGG 0.348991 1_1:-57906568 None:intergenic
TGCACCAAAAGCAGGGGTGC+TGG 0.350019 1_1:-57903414 None:intergenic
TGCACCAAAAGCAGGGGTGC+TGG 0.350019 1_1:-57903438 None:intergenic
ACACCCGCAACTGCTCCGTT+TGG 0.350724 1_1:+57904458 Msa0031200:CDS
AGTCAGTCTAGTTCTGCATT+TGG 0.351850 1_1:+57903737 Msa0031200:CDS
TCAACTTCAACCTCAGCTTT+TGG 0.352834 1_1:+57903530 Msa0031200:CDS
GAAGAGTCAAGTTTCCTATA+AGG 0.352898 1_1:+57906326 Msa0031200:CDS
GACTATCAATTGGGAGATAA+AGG 0.353749 1_1:+57904118 Msa0031200:CDS
GTCAGGATTTGGAGGTCAAC+GGG 0.354139 1_1:+57903961 Msa0031200:CDS
ACCACTCCTTCCGTTCAATA+TGG 0.354990 1_1:+57906042 Msa0031200:CDS
GCATCTTCAACTCCGGCTTT+TGG 0.355204 1_1:+57902019 Msa0031200:CDS
GCTGGTGCAAGTAGCTTTGC+TGG 0.355697 1_1:+57905666 Msa0031200:intron
GGCTATTCCCCAGAGTTCTA+TGG 0.359916 1_1:+57905942 Msa0031200:CDS
GGATACAAGCTGATGTATAA+AGG 0.363721 1_1:+57908305 Msa0031200:CDS
CCTCTCCCATATTGTTATAT+GGG 0.368578 1_1:-57908338 None:intergenic
GCACCCAGCACCCCAGCTTT+CGG 0.371736 1_1:+57903458 Msa0031200:CDS
TTTGGCACCAGCAGCCCATT+TGG 0.372926 1_1:+57903755 Msa0031200:CDS
GAGAAGCTTACAGTGAAATT+GGG 0.372962 1_1:-57901182 None:intergenic
CTCCGAGGTGGTCCTATCGT+TGG 0.377064 1_1:-57907094 None:intergenic
TCGACAGGCACTCCTGCATT+TGG 0.377919 1_1:+57903338 Msa0031200:CDS
GCCCCAAACGGAGCAGTTGC+GGG 0.378209 1_1:-57904461 None:intergenic
CAAATGCTGGTTGCGACTGT+TGG 0.378679 1_1:-57903277 None:intergenic
GTGCTGGGTGCACCAAAAGC+AGG 0.383968 1_1:-57903446 None:intergenic
GCATTTGGAAGTACTGGTAT+TGG 0.384090 1_1:+57903935 Msa0031200:CDS
ATAAAGGAGAATGGAAGTTC+AGG 0.385079 1_1:+57908239 Msa0031200:CDS
CTCTGGACAGGCTGCAAAGT+TGG 0.388026 1_1:+57904036 Msa0031200:CDS
AAATATATCCCAAAGCAAAA+AGG 0.388835 1_1:-57908486 None:intergenic
TTATTCAGCCCTTGTCCAAC+AGG 0.390186 1_1:-57908067 None:intergenic
TTTATAGGATCATCAGTGTT+TGG 0.391041 1_1:+57903155 Msa0031200:intron
GTGCTGGGTGCACCAAAAGC+AGG 0.391403 1_1:-57903422 None:intergenic
CAAACGGGTAATTCCGTGTT+TGG 0.392079 1_1:+57901884 Msa0031200:CDS
CATTTGGAAGTACTGGTATT+GGG 0.392197 1_1:+57903936 Msa0031200:CDS
TAGATCTGCGAGAAGAGATT+AGG 0.395385 1_1:-57901154 None:intergenic
TACAGTAGCAGGTTTGTCTT+GGG 0.396511 1_1:-57906263 None:intergenic
CACTGTGTTTGGTGGTGGTG+GGG 0.397049 1_1:+57903586 Msa0031200:CDS
GCTCGTCTCAATCCGTGTTC+GGG 0.397437 1_1:+57901789 Msa0031200:CDS
TTGGCACCAGCAGCCCATTT+GGG 0.397862 1_1:+57903756 Msa0031200:CDS
TTTGGGAGTCCAACTCCATT+TGG 0.398461 1_1:+57901854 Msa0031200:CDS
CAACCATCACAACCAGCATT+TGG 0.399302 1_1:+57903245 Msa0031200:CDS
CAACAGTCGCAACCAGCATT+TGG 0.399339 1_1:+57903278 Msa0031200:CDS
ACTTTGACCTCCAAAATTAG+AGG 0.401833 1_1:-57903786 None:intergenic
GGTTCCTCAACACCAGCATT+TGG 0.403378 1_1:+57903314 Msa0031200:CDS
GGTAATTCGTCATCGTCATT+TGG 0.404398 1_1:+57902040 Msa0031200:CDS
GGAGGTCAAAGTTCTGCATT+TGG 0.406400 1_1:+57903797 Msa0031200:CDS
CAGACTCCCACTCAAGCATT+TGG 0.409112 1_1:+57903920 Msa0031200:CDS
CGGATTGAGACGAGCCGAAC+GGG 0.409832 1_1:-57901781 None:intergenic
AGCACCAGTTTGCCCAAATT+GGG 0.411313 1_1:-57904642 None:intergenic
TTACAGTAGCAGGTTTGTCT+TGG 0.411503 1_1:-57906264 None:intergenic
ATGTGCCTTGACCACCAAAC+AGG 0.411754 1_1:-57904520 None:intergenic
ACTGCCTCGTATTCATGAAT+TGG 0.411963 1_1:+57907862 Msa0031200:CDS
TAATCAGACCGTCGCAGCTT+TGG 0.412110 1_1:-57907833 None:intergenic
CCTACTCAAACAAGTCCATT+TGG 0.414331 1_1:+57903212 Msa0031200:CDS
AACTGGTGAAGTTTAGTGCC+AGG 0.414647 1_1:+57908565 Msa0031200:three_prime_UTR
AAGTGTTAAATAGGCTTGGC+TGG 0.416555 1_1:-57904577 None:intergenic
GCTTTGCCTCAGATGTCAAT+TGG 0.419405 1_1:+57906009 Msa0031200:CDS
ATTGCAGTTGGGGATTATCT+AGG 0.420769 1_1:+57901384 Msa0031200:intron
CAAATGCTGGTTGTGATGGT+TGG 0.422181 1_1:-57903244 None:intergenic
GCACCAAAAGCAGGGGTGCT+GGG 0.422344 1_1:-57903413 None:intergenic
GCACCAAAAGCAGGGGTGCT+GGG 0.422344 1_1:-57903437 None:intergenic
GCCTCTGCTCCTCCGTCAAC+TGG 0.423618 1_1:+57904242 Msa0031200:CDS
TGTCCCATGGAGCAGTGGCC+TGG 0.426491 1_1:+57906550 Msa0031200:CDS
CCACTGTGTTTGGTGGTGGT+GGG 0.427431 1_1:+57903585 Msa0031200:CDS
AACCAGACTGTGCATTTGTA+GGG 0.430698 1_1:-57904604 None:intergenic
TCCGAGGTGGTCCTATCGTT+GGG 0.431469 1_1:-57907093 None:intergenic
TACACTGAAGGACCGAGAAT+CGG 0.431501 1_1:+57908148 Msa0031200:CDS
GGTGGTCCTATCGTTGGGTT+TGG 0.431893 1_1:-57907088 None:intergenic
TGCCCCAAAAGCTGGGGTGC+TGG 0.432347 1_1:-57903486 None:intergenic
TTTGGTGCTTCTAGTGCCCC+AGG 0.432998 1_1:+57903683 Msa0031200:CDS
GCTACGAGCACTCCTGCATT+TGG 0.435030 1_1:+57903362 Msa0031200:CDS
GTTCCAAATGGGTTTGTAAT+GGG 0.435848 1_1:-57905979 None:intergenic
AAGATGGGAGGACTATCAAT+TGG 0.435890 1_1:+57904108 Msa0031200:CDS
GCACCGAAAGCTGGGGTGCT+GGG 0.436530 1_1:-57903461 None:intergenic
GCTACGAGCACCCCTGCGTT+TGG 0.438383 1_1:+57903386 Msa0031200:CDS
GCACCCATTACAAACCCATT+TGG 0.439385 1_1:+57905976 Msa0031200:CDS
GAGCTGGAGGCCCCAAATGC+AGG 0.441051 1_1:-57903653 None:intergenic
ACTGTGTTTGGTGGTGGTGG+GGG 0.444013 1_1:+57903587 Msa0031200:CDS
AGATCTGCGAGAAGAGATTA+GGG 0.444087 1_1:-57901153 None:intergenic
GGCCCCAAACGGAGCAGTTG+CGG 0.444928 1_1:-57904462 None:intergenic
ATCTACACCTTCTTTCCAAT+CGG 0.446617 1_1:+57905496 Msa0031200:CDS
GTATCATATGATCCCAATAA+AGG 0.449462 1_1:+57908223 Msa0031200:CDS
CTTGTGCAACCATAGAACTC+TGG 0.449744 1_1:-57905951 None:intergenic
GCATCAGCCTTTGGTGTGGT+TGG 0.450225 1_1:-57906487 None:intergenic
AGCACCAAAAGCAGGAGAGC+TGG 0.451061 1_1:-57903669 None:intergenic
GGGTCATCTACATCCCTGTT+TGG 0.451560 1_1:+57904506 Msa0031200:CDS
TGAACTAACCAGGTTGTGTC+TGG 0.452741 1_1:-57905547 None:intergenic
ATTTGGGGCATCTTCAACTC+CGG 0.452768 1_1:+57902012 Msa0031200:CDS
ATGAAAAGGGCATCAGCCTT+TGG 0.454264 1_1:-57906496 None:intergenic
AAACCAGACTGTGCATTTGT+AGG 0.456191 1_1:-57904605 None:intergenic
CCAAATGGCTTAGGTGCAAA+AGG 0.459149 1_1:-57901836 None:intergenic
GATACAAGCTGATGTATAAA+GGG 0.460606 1_1:+57908306 Msa0031200:exon
AAATGCTGGTTGTGATGGTT+GGG 0.460765 1_1:-57903243 None:intergenic
TTGAGGAGTGTTACCTCAGC+AGG 0.461242 1_1:-57908091 None:intergenic
TGCTGGGTGCACCAAACGCA+GGG 0.461264 1_1:-57903397 None:intergenic
ATGGTCTTCGTTATTCCCAT+TGG 0.461838 1_1:-57907711 None:intergenic
TCCATTTGGATCGCAGCAAA+CGG 0.462848 1_1:+57901868 Msa0031200:CDS
GCTCAAACTCAAAGCATGTT+TGG 0.463757 1_1:+57905690 Msa0031200:CDS
GGGCAGTCATCGAGCCCGTT+CGG 0.464084 1_1:+57901767 Msa0031200:CDS
CTTCCAGGCCACTGCTCCAT+GGG 0.464292 1_1:-57906553 None:intergenic
GAAGCAGATAGTGGCACCTC+TGG 0.465746 1_1:+57904019 Msa0031200:CDS
CTTCCAAATGCTGGTTGTGA+TGG 0.465773 1_1:-57903248 None:intergenic
GCCCCTACAAATGCACAGTC+TGG 0.468736 1_1:+57904602 Msa0031200:CDS
AGTACTGGTATTGGGCAGTC+AGG 0.469117 1_1:+57903944 Msa0031200:CDS
ACACTGAAGGACCGAGAATC+GGG 0.472233 1_1:+57908149 Msa0031200:CDS
CCCGTTTGCTGCGATCCAAA+TGG 0.472542 1_1:-57901869 None:intergenic
CCTTCCAGGCCACTGCTCCA+TGG 0.473071 1_1:-57906554 None:intergenic
TTAGAGGTCGTACTCCCAAA+TGG 0.473073 1_1:-57903770 None:intergenic
GAGGATATTCTTACAGTAGC+AGG 0.473971 1_1:-57906274 None:intergenic
ACCCGCAACTGCTCCGTTTG+GGG 0.474562 1_1:+57904460 Msa0031200:CDS
TGATGAAGCGCCGAAAGTAT+TGG 0.475170 1_1:-57901960 None:intergenic
CGAAGACCATTCTCTGCAAA+AGG 0.475245 1_1:+57907724 Msa0031200:CDS
GCCAAAGTTGCTAAAGGAAA+AGG 0.480874 1_1:-57905525 None:intergenic
ATTGGAAAGAAGGTGTAGAT+TGG 0.481485 1_1:-57905493 None:intergenic
TACTTCAATGCCGGCATTTG+GGG 0.482872 1_1:+57901997 Msa0031200:CDS
GTGCTGGGTGCACCAAACGC+AGG 0.487611 1_1:-57903398 None:intergenic
TTGACATGACTGCAGAATCC+TGG 0.488318 1_1:-57907905 None:intergenic
ACTCAAGCATTTGGAAGTAC+TGG 0.489144 1_1:+57903929 Msa0031200:CDS
CCTCCGTCAACTGGTATGCC+AGG 0.491081 1_1:+57904251 Msa0031200:CDS
AAAGCAGGAAGTGTTCCAAA+TGG 0.491487 1_1:-57905991 None:intergenic
GACTTTGTCGTTGGAAGGCA+AGG 0.491709 1_1:+57907929 Msa0031200:CDS
GCCTCGTATTCATGAATTGG+CGG 0.491804 1_1:+57907865 Msa0031200:CDS
TGGGTGTTACTTCCAAATGC+TGG 0.491830 1_1:-57903257 None:intergenic
AAAGCCACGAGGAGCTAAGA+TGG 0.492465 1_1:+57904092 Msa0031200:CDS
ATGTTCAATCAACCTTCATC+TGG 0.492928 1_1:+57904680 Msa0031200:CDS
GTACCAGCCGATTGGAAAGA+AGG 0.493122 1_1:-57905503 None:intergenic
TGTTCCAAATGGGTTTGTAA+TGG 0.494999 1_1:-57905980 None:intergenic
ATGATCCCAATAAAGGAGAA+TGG 0.495773 1_1:+57908230 Msa0031200:CDS
GTCGTTGGAAGGCAAGGTTA+TGG 0.496990 1_1:+57907935 Msa0031200:CDS
TATTCATGAATTGGCGGCTA+AGG 0.497209 1_1:+57907871 Msa0031200:CDS
GTTGAAGATGCCCCAAATGC+CGG 0.498443 1_1:-57902007 None:intergenic
GGGATAAGCTCAAGAGAAGC+AGG 0.498506 1_1:+57907063 Msa0031200:intron
GTTGGACTCCCAAATGGCTT+AGG 0.498646 1_1:-57901845 None:intergenic
TGCTGGGTGCACCAAAAGCA+GGG 0.498893 1_1:-57903421 None:intergenic
TGCTGGGTGCACCAAAAGCA+GGG 0.498893 1_1:-57903445 None:intergenic
ATCAAGCACGCCTGCATTTG+GGG 0.499047 1_1:+57903643 Msa0031200:CDS
TAAAGGAGAATGGAAGTTCA+GGG 0.500263 1_1:+57908240 Msa0031200:CDS
GACGAGGAGTTGGCCCCAAA+CGG 0.500738 1_1:-57904473 None:intergenic
GGCATTGAAGTACCAAAAGC+TGG 0.504883 1_1:-57901986 None:intergenic
GTGTTTGGTGGTACTTCCAC+CGG 0.505032 1_1:+57901899 Msa0031200:CDS
AGATAGTGGCACCTCTGGAC+AGG 0.505057 1_1:+57904024 Msa0031200:CDS
GGTGTTGTGCTACTAGAGAA+AGG 0.505152 1_1:-57904326 None:intergenic
CCATGGAGCAGTGGCCTGGA+AGG 0.506677 1_1:+57906554 Msa0031200:CDS
CCATTTGGATCGCAGCAAAC+GGG 0.507092 1_1:+57901869 Msa0031200:CDS
ACTCCTCGTCACAGCCAGTT+GGG 0.507517 1_1:+57904486 Msa0031200:CDS
ATTGACATCTGAGGCAAAGC+AGG 0.507708 1_1:-57906006 None:intergenic
AAGCAGGAAGTGTTCCAAAT+GGG 0.508299 1_1:-57905990 None:intergenic
ACACCTTCTTTCCAATCGGC+TGG 0.509909 1_1:+57905500 Msa0031200:CDS
GACAGTACCATTCTCATTCA+CGG 0.510075 1_1:-57906617 None:intergenic
GAGAAAAGGCTTCCAGATGA+AGG 0.510564 1_1:-57904692 None:intergenic
AACTTTGGCCAGACACAACC+TGG 0.510599 1_1:+57905539 Msa0031200:CDS
TTTATCTTTGTAAACAGGCA+TGG 0.510768 1_1:-57904071 None:intergenic
CGTACTCCCAAATGGGCTGC+TGG 0.511093 1_1:-57903762 None:intergenic
CATGTCCCATATAACAATAT+GGG 0.511531 1_1:+57908333 Msa0031200:three_prime_UTR
GGACAAATGATCAACGCCCT+TGG 0.512561 1_1:-57906532 None:intergenic
TATAAGGAAATACAAGAATG+AGG 0.513013 1_1:+57906342 Msa0031200:CDS
GATGATGAAGAAGGAAATGC+TGG 0.513464 1_1:-57904407 None:intergenic
ATGTCAAATACCACTGTGTT+TGG 0.514225 1_1:+57903575 Msa0031200:CDS
ACATCCCTGTTTGGTGGTCA+AGG 0.514827 1_1:+57904515 Msa0031200:CDS
TAAAGAGATGCTCAAGAGAA+AGG 0.516587 1_1:+57908177 Msa0031200:CDS
CCACTTCAGCGTTTACAAGC+TGG 0.517488 1_1:+57908267 Msa0031200:CDS
CATATCAACAAGGTTGGCCC+TGG 0.517749 1_1:-57908462 None:intergenic
ACACCAGCATTTGGTTCGAC+AGG 0.518178 1_1:+57903323 Msa0031200:CDS
TTGTGCAACCATAGAACTCT+GGG 0.518512 1_1:-57905950 None:intergenic
CAGATGTCAATTGGTCGAGT+TGG 0.518776 1_1:+57906018 Msa0031200:CDS
TCTTCATCATCACTAAAGAA+TGG 0.520226 1_1:-57906460 None:intergenic
AATATGCTGCTTCCAAATGC+TGG 0.520387 1_1:-57903290 None:intergenic
GAGCCAAAACCTCCAAAAGA+AGG 0.520720 1_1:-57903185 None:intergenic
GGCGTTGATCATTTGTCCCA+TGG 0.521200 1_1:+57906537 Msa0031200:CDS
GAAGGTTGATTGAACATGCT+TGG 0.522236 1_1:-57904674 None:intergenic
CATGTCAAGGACTTTGTCGT+TGG 0.524179 1_1:+57907920 Msa0031200:CDS
GATGCATGCTTCGTAGGTAC+AGG 0.525211 1_1:-57907689 None:intergenic
TAGAGGTCGTACTCCCAAAT+GGG 0.525993 1_1:-57903769 None:intergenic
CCGAAAGTATTGGAAGAAAA+CGG 0.526469 1_1:-57901950 None:intergenic
TGGAACCAAAACTAAAACCT+GGG 0.526628 1_1:-57903700 None:intergenic
AATGGAGTTGGACTCCCAAA+TGG 0.527280 1_1:-57901851 None:intergenic
TGCTGCGATCCAAATGGAGT+TGG 0.528471 1_1:-57901863 None:intergenic
TCAAGGACTTTGTCGTTGGA+AGG 0.528854 1_1:+57907924 Msa0031200:CDS
AAATGCTGGTTGCGACTGTT+GGG 0.528915 1_1:-57903276 None:intergenic
CCAAATGGACTTGTTTGAGT+AGG 0.529453 1_1:-57903212 None:intergenic
GTCGTAGACGAATTAAAGCC+TGG 0.529750 1_1:-57904269 None:intergenic
CAGTGGGCACAGAGCTGGTG+AGG 0.530438 1_1:+57907766 Msa0031200:CDS
AAGAAACCTCCTGTTGGACA+AGG 0.532888 1_1:+57908058 Msa0031200:CDS
TGAACCAAATGCAGGGGTGC+TGG 0.532978 1_1:-57903510 None:intergenic
TCATTCCTAGGGAAAATCCA+AGG 0.533348 1_1:+57906515 Msa0031200:CDS
TGACTCTTCTTTGTGAGAGG+TGG 0.533352 1_1:-57906312 None:intergenic
GCTACAGTGGAAGCAGATAG+TGG 0.534008 1_1:+57904010 Msa0031200:CDS
GCAGAAGTGTTAAATAGGCT+TGG 0.534605 1_1:-57904581 None:intergenic
TCATCTACATCCCTGTTTGG+TGG 0.536524 1_1:+57904509 Msa0031200:CDS
TACACCTCCGTGAATGAGAA+TGG 0.536980 1_1:+57906610 Msa0031200:CDS
AGGAAAAGGTACCAGCCGAT+TGG 0.537215 1_1:-57905511 None:intergenic
CCATTGGATGCATGCTTCGT+AGG 0.537249 1_1:-57907695 None:intergenic
AACTCCTCGTCACAGCCAGT+TGG 0.537472 1_1:+57904485 Msa0031200:CDS
GTTGAAGTTGAACCAAATGC+AGG 0.538366 1_1:-57903518 None:intergenic
CTACGAAGCATGCATCCAAT+GGG 0.539644 1_1:+57907696 Msa0031200:CDS
AGTCAGGATTTGGAGGTCAA+CGG 0.542037 1_1:+57903960 Msa0031200:CDS
GGTTGGGTGGCACTTCCAAA+TGG 0.543213 1_1:-57903227 None:intergenic
AGCTGGTAGATGAAGACAGT+TGG 0.546871 1_1:+57908284 Msa0031200:CDS
ACTTGACTCTTCTTTGTGAG+AGG 0.547105 1_1:-57906315 None:intergenic
ACCAAAAGCAGGAGAGCTGG+AGG 0.547838 1_1:-57903666 None:intergenic
GTGATGGGCTGCTTGAGAAA+AGG 0.548542 1_1:-57904706 None:intergenic
CACTAATGCCAAAGCTGCGA+CGG 0.551023 1_1:+57907825 Msa0031200:CDS
AGATGGGAGGACTATCAATT+GGG 0.551615 1_1:+57904109 Msa0031200:CDS
CTACTAGAGAAAGGATTGGC+TGG 0.552358 1_1:-57904317 None:intergenic
GTGCTCGTAGCACCAAATGC+AGG 0.553367 1_1:-57903350 None:intergenic
GGTGTATCTATCCTTAAAAG+AGG 0.554469 1_1:-57906593 None:intergenic
GCTGGTTGCCCCAAAAGCTG+GGG 0.556557 1_1:-57903492 None:intergenic
GTGCTTGATGAACCAAATAC+AGG 0.557053 1_1:-57903629 None:intergenic
ATACAAGAATGAGGGATCAA+AGG 0.557272 1_1:+57906351 Msa0031200:CDS
ACACTCAGTGGGCACAGAGC+TGG 0.558567 1_1:+57907761 Msa0031200:CDS
AACTGGCTGTGACGAGGAGT+TGG 0.560749 1_1:-57904483 None:intergenic
AATACCACTGTGTTTGGTGG+TGG 0.561037 1_1:+57903581 Msa0031200:CDS
GTGGAACCAAAACTAAAACC+TGG 0.562126 1_1:-57903701 None:intergenic
CCTACGAAGCATGCATCCAA+TGG 0.563785 1_1:+57907695 Msa0031200:CDS
TCATTTGTCCCATGGAGCAG+TGG 0.564174 1_1:+57906545 Msa0031200:CDS
AAGCCTGGCATACCAGTTGA+CGG 0.564463 1_1:-57904254 None:intergenic
GCACTAGAAGCACCAAAAGC+AGG 0.564969 1_1:-57903677 None:intergenic
AGGGATGTAGATGACCCAAC+TGG 0.566062 1_1:-57904500 None:intergenic
TGCTGGTTGTGATGGTTGGG+TGG 0.568361 1_1:-57903240 None:intergenic
GAGGTGGCGAGAAGTCAATA+AGG 0.568451 1_1:-57906296 None:intergenic
CCAGCTTGTAAACGCTGAAG+TGG 0.568812 1_1:-57908267 None:intergenic
TCGTGAGGTGATTGTATACA+TGG 0.570815 1_1:+57908027 Msa0031200:CDS
GTTGTTCTGCTGCCCGAACA+CGG 0.574376 1_1:-57901801 None:intergenic
TGTCTGGCCAAAGTTGCTAA+AGG 0.574424 1_1:-57905531 None:intergenic
AATTCGTCATCGTCATTTGG+TGG 0.574431 1_1:+57902043 Msa0031200:CDS
CATTCCTAGGGAAAATCCAA+GGG 0.574460 1_1:+57906516 Msa0031200:CDS
AGGAAATGCTGGTGAACTGA+AGG 0.575618 1_1:-57904396 None:intergenic
ATGTTTGGTCAGAATAATGT+TGG 0.578136 1_1:+57905705 Msa0031200:CDS
TTCAGCCCTTGTCCAACAGG+AGG 0.580774 1_1:-57908064 None:intergenic
AAAGGACATATCAACAAGGT+TGG 0.582462 1_1:-57908468 None:intergenic
ATAAGGAAATACAAGAATGA+GGG 0.583790 1_1:+57906343 Msa0031200:CDS
GAGATACCATATTGAACGGA+AGG 0.584307 1_1:-57906048 None:intergenic
GTGCTCGTAGCACCAAATGC+AGG 0.588399 1_1:-57903374 None:intergenic
AATGCTGGTGAACTGAAGGC+AGG 0.588493 1_1:-57904392 None:intergenic
CCCATATAACAATATGGGAG+AGG 0.588621 1_1:+57908338 Msa0031200:three_prime_UTR
GCTAAGGAAAGAGCTGAACC+AGG 0.589537 1_1:+57907887 Msa0031200:CDS
ACCAGTTGACGGAGGAGCAG+AGG 0.590749 1_1:-57904243 None:intergenic
GATGCTCAAGAGAAAGGCTG+AGG 0.590765 1_1:+57908183 Msa0031200:CDS
GATTCAAAGAAACCTCCTGT+TGG 0.591139 1_1:+57908052 Msa0031200:CDS
ACTGGTGAAGTTTAGTGCCA+GGG 0.591803 1_1:+57908566 Msa0031200:three_prime_UTR
ACGGGTAATTCCGTGTTTGG+TGG 0.591957 1_1:+57901887 Msa0031200:CDS
AGAAGCTTACAGTGAAATTG+GGG 0.592263 1_1:-57901181 None:intergenic
TTGAAGTTGAACCAAATGCA+GGG 0.592879 1_1:-57903517 None:intergenic
ATTGGGCAGTCAGGATTTGG+AGG 0.596861 1_1:+57903953 Msa0031200:CDS
ACCAGTTTGCCCAAATTGGG+AGG 0.598471 1_1:-57904639 None:intergenic
AGTGTTAAATAGGCTTGGCT+GGG 0.599695 1_1:-57904576 None:intergenic
ACCATATTGAACGGAAGGAG+TGG 0.600178 1_1:-57906043 None:intergenic
AGGATTCTGCAGTCATGTCA+AGG 0.601362 1_1:+57907907 Msa0031200:CDS
GAACTAGACTGACTAAAAGC+CGG 0.602042 1_1:-57903728 None:intergenic
CTGAGCTGCGCCAAATACAC+CGG 0.603244 1_1:-57901918 None:intergenic
GCTGCTGATGATGATGAAGA+AGG 0.605501 1_1:-57904416 None:intergenic
CTCACATCTAATGCTCCGAC+AGG 0.605827 1_1:+57904728 Msa0031200:CDS
GTGCCTGTCGAACCAAATGC+TGG 0.605979 1_1:-57903326 None:intergenic
AAGCCACGAGGAGCTAAGAT+GGG 0.606234 1_1:+57904093 Msa0031200:CDS
GCTGGGTGCACCAAAAGCAG+GGG 0.608639 1_1:-57903420 None:intergenic
GCTGGGTGCACCAAAAGCAG+GGG 0.608639 1_1:-57903444 None:intergenic
GGATTTGGAGGTCAACGGGG+TGG 0.608669 1_1:+57903965 Msa0031200:CDS
AGTACTTCCAAATGCTTGAG+TGG 0.609773 1_1:-57903927 None:intergenic
ACGATTGTTAAACTGAACAA+TGG 0.611463 1_1:-57908008 None:intergenic
CTGACTAAAAGCCGGAGTGG+TGG 0.612070 1_1:-57903720 None:intergenic
GGAGCATTAGATGTGAGTGA+TGG 0.612114 1_1:-57904722 None:intergenic
TCAAATACCACTGTGTTTGG+TGG 0.614427 1_1:+57903578 Msa0031200:CDS
GCTGGTTGCACCGAAAGCTG+GGG 0.615806 1_1:-57903468 None:intergenic
GAGCATTAGATGTGAGTGAT+GGG 0.617858 1_1:-57904721 None:intergenic
CCCTGTGTTACCAAAAGCTG+AGG 0.618001 1_1:-57903540 None:intergenic
ACGGATTGAGACGAGCCGAA+CGG 0.620717 1_1:-57901782 None:intergenic
GCTGGGTGCACCAAACGCAG+GGG 0.621019 1_1:-57903396 None:intergenic
AGCTAGTTACTCAGCTACAG+TGG 0.621042 1_1:+57903997 Msa0031200:CDS
AAGAGAAAGGCTGAGGACCA+AGG 0.622470 1_1:+57908190 Msa0031200:CDS
CAGGTACCAAACCCAACGAT+AGG 0.622891 1_1:+57907082 Msa0031200:CDS
TGTTCAGTTTAACAATCGTG+AGG 0.624585 1_1:+57908012 Msa0031200:CDS
ATGATACAAACTCAGCACCT+TGG 0.625305 1_1:-57908207 None:intergenic
GCTAGAGATACCATATTGAA+CGG 0.627623 1_1:-57906052 None:intergenic
AGCTGAAAATGGTGTTGTCA+AGG 0.628588 1_1:+57907652 Msa0031200:CDS
GTACTTCCAAATGCTTGAGT+GGG 0.631080 1_1:-57903926 None:intergenic
GGTGGAAGTACCACCAAACA+CGG 0.631934 1_1:-57901897 None:intergenic
TGTGCCTTGACCACCAAACA+GGG 0.632883 1_1:-57904519 None:intergenic
CAACTTTGCAGCCTGTCCAG+AGG 0.635625 1_1:-57904035 None:intergenic
CGAACCAAATGCTGGTGTTG+AGG 0.636106 1_1:-57903318 None:intergenic
AGACCATTCTCTGCAAAAGG+CGG 0.640474 1_1:+57907727 Msa0031200:CDS
ACTGGGCAACAGTACACTGA+AGG 0.642908 1_1:+57908136 Msa0031200:CDS
AGAAACCTCCTGTTGGACAA+GGG 0.643332 1_1:+57908059 Msa0031200:CDS
TTGGAAGAAAACGGAGACGA+TGG 0.644511 1_1:-57901941 None:intergenic
GCTGCCATTGTGTATGAACA+TGG 0.647605 1_1:+57907788 Msa0031200:CDS
AAAGAAGGTGTAGATTGGAA+AGG 0.648011 1_1:-57905488 None:intergenic
ACCAGACTGTGCATTTGTAG+GGG 0.649924 1_1:-57904603 None:intergenic
AGATACTCCAACCACACCAA+AGG 0.655834 1_1:+57906480 Msa0031200:CDS
AGGGCTGAATAAGCCTGCTG+AGG 0.658660 1_1:+57908078 Msa0031200:CDS
AGCTCCATGTTCATACACAA+TGG 0.660594 1_1:-57907792 None:intergenic
GACGGAGGAGCAGAGGCATG+TGG 0.661616 1_1:-57904236 None:intergenic
GATATGTACAAGACACTCAG+TGG 0.662232 1_1:+57907749 Msa0031200:CDS
AGCTGCGCCAAATACACCGG+TGG 0.664884 1_1:-57901915 None:intergenic
TGACCCAACTGGCTGTGACG+AGG 0.664975 1_1:-57904489 None:intergenic
CTTCACCAGTTAAAAGACAA+CGG 0.666510 1_1:-57908553 None:intergenic
TGGGTGTGACAGATGTACGA+GGG 0.667447 1_1:+57907972 Msa0031200:CDS
ACTCGACCAATTGACATCTG+AGG 0.669172 1_1:-57906015 None:intergenic
GATGACGAATTACCAAAAGC+CGG 0.670748 1_1:-57902031 None:intergenic
GTGGCGAGAAGTCAATAAGG+AGG 0.671855 1_1:-57906293 None:intergenic
GCTGCTTGTCCAAAACCTGT+CGG 0.672305 1_1:-57904743 None:intergenic
TGTGCTACTAGAGAAAGGAT+TGG 0.673376 1_1:-57904321 None:intergenic
TGAAGTTGAACCAAATGCAG+GGG 0.674521 1_1:-57903516 None:intergenic
CCTCCCATCTTAGCTCCTCG+TGG 0.675080 1_1:-57904096 None:intergenic
ATATGTACAAGACACTCAGT+GGG 0.677051 1_1:+57907750 Msa0031200:CDS
AGACTGACTAAAAGCCGGAG+TGG 0.677239 1_1:-57903723 None:intergenic
CCACGAGGAGCTAAGATGGG+AGG 0.677956 1_1:+57904096 Msa0031200:CDS
AAGGGCATCAGCCTTTGGTG+TGG 0.679934 1_1:-57906491 None:intergenic
TCAGGATTTGGAGGTCAACG+GGG 0.688130 1_1:+57903962 Msa0031200:CDS
TTGGGTGTGACAGATGTACG+AGG 0.689369 1_1:+57907971 Msa0031200:CDS
AGATTGGAAAGGTGTTGACA+TGG 0.692451 1_1:-57905477 None:intergenic
TGGAAAGGTGTTGACATGGA+CGG 0.696227 1_1:-57905473 None:intergenic
TGAACATGGAGCTGATGTTG+AGG 0.697244 1_1:+57907802 Msa0031200:CDS
GGAACCAAAACTAAAACCTG+GGG 0.698294 1_1:-57903699 None:intergenic
ACCCAACGATAGGACCACCT+CGG 0.699651 1_1:+57907092 Msa0031200:CDS
GCCGCCAATTCATGAATACG+AGG 0.700929 1_1:-57907866 None:intergenic
CAACGATAGGACCACCTCGG+AGG 0.708362 1_1:+57907095 Msa0031200:CDS
CCCACCACCACCAAACACAG+TGG 0.732038 1_1:-57903585 None:intergenic
CCTGGCATACCAGTTGACGG+AGG 0.738091 1_1:-57904251 None:intergenic
TGTGCAACCATAGAACTCTG+GGG 0.762151 1_1:-57905949 None:intergenic
TTACAAAGATAAAAGCCACG+AGG 0.809043 1_1:+57904081 Msa0031200:CDS
AGTACCATTCTCATTCACGG+AGG 0.817913 1_1:-57906614 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTATTTATTGATTAATATA+TGG + chr1_1:57901725-57901744 Msa0031200:intron 10.0%
!!! TGAGTTTTTATTATTTAAAT+CGG - chr1_1:57902143-57902162 None:intergenic 10.0%
!!! TAGTAATATTTTTCATTTAT+AGG - chr1_1:57904928-57904947 None:intergenic 10.0%
!!! ATTATTATATATCTTTTTTG+GGG + chr1_1:57905779-57905798 Msa0031200:intron 10.0%
!!! GAGTTTTTATTATTTAAATC+GGG - chr1_1:57902142-57902161 None:intergenic 15.0%
!! TTAAACTTATAAGTATTTGA+AGG + chr1_1:57902309-57902328 Msa0031200:intron 15.0%
!! TAAACTTATAAGTATTTGAA+GGG + chr1_1:57902310-57902329 Msa0031200:intron 15.0%
!! AAAAATGTTTGTACTAAATT+GGG - chr1_1:57904549-57904568 None:intergenic 15.0%
!! ATACAAGTAATTCAATTATA+AGG - chr1_1:57905274-57905293 None:intergenic 15.0%
!! AAAACATATTAGAAAATGAA+AGG - chr1_1:57905431-57905450 None:intergenic 15.0%
!!! AATGTTTTTTTTTTTTTACC+TGG + chr1_1:57905901-57905920 Msa0031200:intron 15.0%
!! ATAAAATGCTAAAATGTATA+GGG - chr1_1:57906866-57906885 None:intergenic 15.0%
!! AATAAAATGCTAAAATGTAT+AGG - chr1_1:57906867-57906886 None:intergenic 15.0%
!!! TAATATTTTTATTCATAGGA+TGG + chr1_1:57907144-57907163 Msa0031200:intron 15.0%
!! TGCATAATAGTATTAATTTA+GGG - chr1_1:57907384-57907403 None:intergenic 15.0%
!! ATGCATAATAGTATTAATTT+AGG - chr1_1:57907385-57907404 None:intergenic 15.0%
!!! TTTATATAGATTTTACAGTT+TGG + chr1_1:57908508-57908527 Msa0031200:three_prime_UTR 15.0%
!!! TTATATAGATTTTACAGTTT+GGG + chr1_1:57908509-57908528 Msa0031200:three_prime_UTR 15.0%
!! ATAATTGAAAGAAGATGAAA+AGG - chr1_1:57901211-57901230 None:intergenic 20.0%
!! TAAGGATAATAAAATCGATT+AGG - chr1_1:57901470-57901489 None:intergenic 20.0%
!! AAACAAAAAACTGCAAATTA+AGG - chr1_1:57901488-57901507 None:intergenic 20.0%
!! GTTGATTAATTATTGGATTA+TGG + chr1_1:57901532-57901551 Msa0031200:intron 20.0%
!! TAGATAAATGTTAAAGTTAG+TGG + chr1_1:57901566-57901585 Msa0031200:intron 20.0%
!!! GTATAAACAGAATCATATTT+TGG + chr1_1:57902197-57902216 Msa0031200:intron 20.0%
!! ATACAATTCAACAATTAACA+GGG - chr1_1:57902242-57902261 None:intergenic 20.0%
!! TATACAATTCAACAATTAAC+AGG - chr1_1:57902243-57902262 None:intergenic 20.0%
!!! TTGTGTAATTTTAAATTCGT+AGG - chr1_1:57902373-57902392 None:intergenic 20.0%
!! CATTATTAGATAATGAAAGA+AGG - chr1_1:57903033-57903052 None:intergenic 20.0%
!! CTTCTTTCATTATCTAATAA+TGG + chr1_1:57903031-57903050 Msa0031200:intron 20.0%
!!! TTTTTCATATTTTCTTATGC+AGG + chr1_1:57903893-57903912 Msa0031200:intron 20.0%
!!! CATTGACTTAATTCAAATTT+AGG + chr1_1:57904209-57904228 Msa0031200:intron 20.0%
!! CAAAAATGTTTGTACTAAAT+TGG - chr1_1:57904550-57904569 None:intergenic 20.0%
!!! CAATTTAGTACAAACATTTT+TGG + chr1_1:57904548-57904567 Msa0031200:CDS 20.0%
!! ATAATTGAATTACTTGTATG+TGG + chr1_1:57905275-57905294 Msa0031200:intron 20.0%
!!! TATGATTTTGTGATTAAACT+TGG + chr1_1:57905303-57905322 Msa0031200:intron 20.0%
!!! TTAGTTCAATATTTTAGCTA+TGG + chr1_1:57905562-57905581 Msa0031200:intron 20.0%
!!! TAGTTCAATATTTTAGCTAT+GGG + chr1_1:57905563-57905582 Msa0031200:intron 20.0%
!!! ATTTTGTTGTATTAAATAGC+TGG + chr1_1:57905648-57905667 Msa0031200:intron 20.0%
!!! GTTACAATTGTTTTATTTCT+TGG + chr1_1:57905738-57905757 Msa0031200:intron 20.0%
!!! TTGGATTCAATTATCTTTTT+TGG + chr1_1:57905836-57905855 Msa0031200:intron 20.0%
!!! ATTCTGTTTATTTTTTAAGC+TGG + chr1_1:57906111-57906130 Msa0031200:intron 20.0%
!!! TAGTTTTTTTTGTTATGATG+AGG + chr1_1:57906384-57906403 Msa0031200:intron 20.0%
!! AATACTGAAAAACAAATCTT+GGG - chr1_1:57906727-57906746 None:intergenic 20.0%
!!! CTAGATTTTATTCCTTTATT+AGG + chr1_1:57906763-57906782 Msa0031200:intron 20.0%
!! AAATAAGTTTATGGCAAAAT+AGG - chr1_1:57906920-57906939 None:intergenic 20.0%
!!! ATATCTTGAATGTAATTTTC+AGG + chr1_1:57907042-57907061 Msa0031200:intron 20.0%
!!! TATCTTGAATGTAATTTTCA+GGG + chr1_1:57907043-57907062 Msa0031200:intron 20.0%
!!! TGATCTATGTTAACAAATTT+TGG + chr1_1:57907178-57907197 Msa0031200:intron 20.0%
!! TTGATCAGTCATTTAAAAAT+TGG - chr1_1:57907552-57907571 None:intergenic 20.0%
!!! TAACTTCTGTAAATGATTTT+AGG + chr1_1:57907623-57907642 Msa0031200:intron 20.0%
!!! AACTTCTGTAAATGATTTTA+GGG + chr1_1:57907624-57907643 Msa0031200:intron 20.0%
!!! AAATGTTTTGACAAAAAAAC+TGG + chr1_1:57908118-57908137 Msa0031200:CDS 20.0%
!!! AATGTTTTGACAAAAAAACT+GGG + chr1_1:57908119-57908138 Msa0031200:CDS 20.0%
!!! AACAATACATTTCATAGTTT+TGG + chr1_1:57908363-57908382 Msa0031200:three_prime_UTR 20.0%
!!! TAAATTGTTTCTCTATTTTG+TGG + chr1_1:57908433-57908452 Msa0031200:three_prime_UTR 20.0%
! GATTAATCCGTTATAATCTT+AGG + chr1_1:57901306-57901325 Msa0031200:intron 25.0%
!! TTGTAGGGTTGATTAATTAT+TGG + chr1_1:57901525-57901544 Msa0031200:intron 25.0%
! ATAATGACAACAACATAGAT+TGG - chr1_1:57901682-57901701 None:intergenic 25.0%
!!! GGAAATTTTTTAACAGCTTT+CGG + chr1_1:57901746-57901765 Msa0031200:intron 25.0%
!!! GAAATTTTTTAACAGCTTTC+GGG + chr1_1:57901747-57901766 Msa0031200:intron 25.0%
! TGAGCAAGACAATTAATAAA+TGG - chr1_1:57902106-57902125 None:intergenic 25.0%
! TTTATTAATTGTCTTGCTCA+TGG + chr1_1:57902106-57902125 Msa0031200:intron 25.0%
! TTTATACTCTTAATTGCTGA+GGG - chr1_1:57902184-57902203 None:intergenic 25.0%
!!! TAAACAGAATCATATTTTGG+TGG + chr1_1:57902200-57902219 Msa0031200:intron 25.0%
! TACAATTCAACAATTAACAG+GGG - chr1_1:57902241-57902260 None:intergenic 25.0%
!! AGATTTTATGCAAAATCAAG+GGG - chr1_1:57902521-57902540 None:intergenic 25.0%
!! GAGATTTTATGCAAAATCAA+GGG - chr1_1:57902522-57902541 None:intergenic 25.0%
!!! TTTTGAAACCAGTTTATTGT+TGG + chr1_1:57902591-57902610 Msa0031200:intron 25.0%
!! ATCCAACTTTTCTCTTTTAT+AGG + chr1_1:57903140-57903159 Msa0031200:intron 25.0%
! ATCCTATAAAAGAGAAAAGT+TGG - chr1_1:57903145-57903164 None:intergenic 25.0%
! AAATAATTCGATAATTCTGC+TGG + chr1_1:57904163-57904182 Msa0031200:intron 25.0%
! TGACTTAATTCAAATTTAGG+TGG + chr1_1:57904212-57904231 Msa0031200:intron 25.0%
! AAACTAACTGTGATCTTTAA+TGG - chr1_1:57904811-57904830 None:intergenic 25.0%
!!! ATCAATTCTCTTAATGGATT+AGG - chr1_1:57905071-57905090 None:intergenic 25.0%
! TGAAGAATCAATTCTCTTAA+TGG - chr1_1:57905077-57905096 None:intergenic 25.0%
! AAAGAAAGGAATCCTAAAAA+TGG - chr1_1:57905362-57905381 None:intergenic 25.0%
! GAAGGATTAATGTTTCAAAT+TGG + chr1_1:57905618-57905637 Msa0031200:intron 25.0%
!!! TATAATGTCATTTTTGTGTG+TGG + chr1_1:57905861-57905880 Msa0031200:intron 25.0%
!! AAACTATGATCAACCTTTTT+GGG + chr1_1:57906183-57906202 Msa0031200:intron 25.0%
! TCATTCTTGTATTTCCTTAT+AGG - chr1_1:57906343-57906362 None:intergenic 25.0%
! TATAAGGAAATACAAGAATG+AGG + chr1_1:57906342-57906361 Msa0031200:CDS 25.0%
! ATAAGGAAATACAAGAATGA+GGG + chr1_1:57906343-57906362 Msa0031200:CDS 25.0%
! GAATACTGAAAAACAAATCT+TGG - chr1_1:57906728-57906747 None:intergenic 25.0%
!!! TTTGACTTGTGTTTTGTAAT+TGG + chr1_1:57906890-57906909 Msa0031200:intron 25.0%
! CCTTATGTTTGTAAAAACTT+CGG + chr1_1:57906989-57907008 Msa0031200:intron 25.0%
!! TTGCAATTACATCTTAGTTT+TGG + chr1_1:57907238-57907257 Msa0031200:intron 25.0%
!!! TGCAATTACATCTTAGTTTT+GGG + chr1_1:57907239-57907258 Msa0031200:intron 25.0%
!! AAAACATAGTGAGCTTATTT+TGG - chr1_1:57907327-57907346 None:intergenic 25.0%
! AATGGAAATATTATCTGCTA+TGG + chr1_1:57907521-57907540 Msa0031200:intron 25.0%
!!! GAATAAAAGCACCAAAATAA+GGG - chr1_1:57907595-57907614 None:intergenic 25.0%
!! TGTCAAAACATTTTATGTTG+AGG - chr1_1:57908111-57908130 None:intergenic 25.0%
! AAATATATCCCAAAGCAAAA+AGG - chr1_1:57908489-57908508 None:intergenic 25.0%
AGCTAGACCTAAGATTATAA+CGG - chr1_1:57901316-57901335 None:intergenic 30.0%
TATATCAAATTGCGCAAGAA+CGG - chr1_1:57901353-57901372 None:intergenic 30.0%
TATCTAGGTTTCACTCTATT+TGG + chr1_1:57901399-57901418 Msa0031200:five_prime_UTR 30.0%
TTAGTGGTTGTATTAGTTAC+CGG + chr1_1:57901582-57901601 Msa0031200:intron 30.0%
GTTTATACTCTTAATTGCTG+AGG - chr1_1:57902185-57902204 None:intergenic 30.0%
AGTATTTGAAGGGTGATTTA+AGG + chr1_1:57902320-57902339 Msa0031200:intron 30.0%
CAAGTACTTCAAGTGATTTA+AGG + chr1_1:57902390-57902409 Msa0031200:intron 30.0%
! CGAGATTTTATGCAAAATCA+AGG - chr1_1:57902523-57902542 None:intergenic 30.0%
!! AATCTCGATTTTAACGATCT+TGG + chr1_1:57902536-57902555 Msa0031200:intron 30.0%
AATCAGTAGACTATCTTCAT+TGG + chr1_1:57902565-57902584 Msa0031200:intron 30.0%
TGACATAACCAACAATAAAC+TGG - chr1_1:57902602-57902621 None:intergenic 30.0%
! AATAACAGTTTTCATACACG+TGG + chr1_1:57902657-57902676 Msa0031200:intron 30.0%
ATTTCATGTGAATTTGTGTG+TGG + chr1_1:57902789-57902808 Msa0031200:intron 30.0%
TTTCATGTGAATTTGTGTGT+GGG + chr1_1:57902790-57902809 Msa0031200:intron 30.0%
TTGTTCTTAAGTGTTTCACA+TGG - chr1_1:57902886-57902905 None:intergenic 30.0%
ATCTCAGTTATGTAGTCTTT+AGG - chr1_1:57902987-57903006 None:intergenic 30.0%
! TGGTAATCATTAGCATCTTT+TGG + chr1_1:57903051-57903070 Msa0031200:intron 30.0%
TTTATAGGATCATCAGTGTT+TGG + chr1_1:57903155-57903174 Msa0031200:intron 30.0%
TTTATCTTTGTAAACAGGCA+TGG - chr1_1:57904074-57904093 None:intergenic 30.0%
! TGGCTTTTATCTTTGTAAAC+AGG - chr1_1:57904079-57904098 None:intergenic 30.0%
!!! ATAATTCTGCTGGCTTTTAT+TGG + chr1_1:57904173-57904192 Msa0031200:intron 30.0%
! CAAATGTCTTTTGTGCAAAT+GGG - chr1_1:57904361-57904380 None:intergenic 30.0%
GTTTATGATCCAAGATAAGA+TGG + chr1_1:57904827-57904846 Msa0031200:intron 30.0%
TACTATAGAACAATGACAAC+TGG - chr1_1:57904901-57904920 None:intergenic 30.0%
TAAAGTAAAACCATCCTGTT+AGG + chr1_1:57905008-57905027 Msa0031200:intron 30.0%
TTTATGTGTATTGCATTACC+TGG + chr1_1:57905100-57905119 Msa0031200:intron 30.0%
TTATGTGTATTGCATTACCT+GGG + chr1_1:57905101-57905120 Msa0031200:intron 30.0%
TTTCACCTTCTTTGAATTGT+TGG + chr1_1:57905213-57905232 Msa0031200:intron 30.0%
TAACACCAACAATTCAAAGA+AGG - chr1_1:57905221-57905240 None:intergenic 30.0%
!! CTTTGAATTGTTGGTGTTAA+TGG + chr1_1:57905222-57905241 Msa0031200:intron 30.0%
AATGGAAAAGTCAGCATAAA+CGG + chr1_1:57905240-57905259 Msa0031200:intron 30.0%
ATGATACACACAGAAAAGAA+AGG - chr1_1:57905376-57905395 None:intergenic 30.0%
GCTAAAATATTGAACTAACC+AGG - chr1_1:57905560-57905579 None:intergenic 30.0%
ATGTTTGGTCAGAATAATGT+TGG + chr1_1:57905705-57905724 Msa0031200:CDS 30.0%
! TGGATGTTTTATGTTTGACA+GGG + chr1_1:57905921-57905940 Msa0031200:intron 30.0%
AATCAAGAAACATCACTTAC+AGG - chr1_1:57906081-57906100 None:intergenic 30.0%
! CAAACTATGATCAACCTTTT+TGG + chr1_1:57906182-57906201 Msa0031200:intron 30.0%
AAATGTAAAACCACCCAAAA+AGG - chr1_1:57906199-57906218 None:intergenic 30.0%
TAATTACACTGTTCTCTTAC+AGG + chr1_1:57906435-57906454 Msa0031200:intron 30.0%
TCTTCATCATCACTAAAGAA+TGG - chr1_1:57906463-57906482 None:intergenic 30.0%
! ATTTTCCCTAGGAATGAAAA+GGG - chr1_1:57906512-57906531 None:intergenic 30.0%
! CTGGTCTTTATACCTAATAA+AGG - chr1_1:57906778-57906797 None:intergenic 30.0%
! CCGAAGTTTTTACAAACATA+AGG - chr1_1:57906992-57907011 None:intergenic 30.0%
!!! GCAATTACATCTTAGTTTTG+GGG + chr1_1:57907240-57907259 Msa0031200:intron 30.0%
!! GGAATAAAAGCACCAAAATA+AGG - chr1_1:57907596-57907615 None:intergenic 30.0%
ATTTACAGAAGTTATGACAC+AGG - chr1_1:57907617-57907636 None:intergenic 30.0%
ACGATTGTTAAACTGAACAA+TGG - chr1_1:57908011-57908030 None:intergenic 30.0%
TCTTTATATTTCCCGATTCT+CGG - chr1_1:57908163-57908182 None:intergenic 30.0%
GTATCATATGATCCCAATAA+AGG + chr1_1:57908223-57908242 Msa0031200:CDS 30.0%
AACTTCCATTCTCCTTTATT+GGG - chr1_1:57908238-57908257 None:intergenic 30.0%
GATACAAGCTGATGTATAAA+GGG + chr1_1:57908306-57908325 Msa0031200:exon 30.0%
ACATGTCCCATATAACAATA+TGG + chr1_1:57908332-57908351 Msa0031200:three_prime_UTR 30.0%
CATGTCCCATATAACAATAT+GGG + chr1_1:57908333-57908352 Msa0031200:three_prime_UTR 30.0%
! TTGATATGTCCTTTTTGCTT+TGG + chr1_1:57908477-57908496 Msa0031200:three_prime_UTR 30.0%
! TGATATGTCCTTTTTGCTTT+GGG + chr1_1:57908478-57908497 Msa0031200:three_prime_UTR 30.0%
! TATTTCCGTTGTCTTTTAAC+TGG + chr1_1:57908548-57908567 Msa0031200:three_prime_UTR 30.0%
AGAAGCTTACAGTGAAATTG+GGG - chr1_1:57901184-57901203 None:intergenic 35.0%
GAGAAGCTTACAGTGAAATT+GGG - chr1_1:57901185-57901204 None:intergenic 35.0%
TGAGAAGCTTACAGTGAAAT+TGG - chr1_1:57901186-57901205 None:intergenic 35.0%
! ATGTTGTTGTTGATTGCAGT+TGG + chr1_1:57901372-57901391 Msa0031200:intron 35.0%
! TGTTGTTGTTGATTGCAGTT+GGG + chr1_1:57901373-57901392 Msa0031200:intron 35.0%
TGGAAAGTTGTAAGCATGTT+TGG + chr1_1:57901419-57901438 Msa0031200:exon 35.0%
TAGTGGTTGTATTAGTTACC+GGG + chr1_1:57901583-57901602 Msa0031200:intron 35.0%
AGTTATAAGAGTTAAGTCCC+CGG - chr1_1:57901615-57901634 None:intergenic 35.0%
!! CCGAAAGTATTGGAAGAAAA+CGG - chr1_1:57901953-57901972 None:intergenic 35.0%
! CCGTTTTCTTCCAATACTTT+CGG + chr1_1:57901950-57901969 Msa0031200:CDS 35.0%
!!! CATATTTTGGTGGAAAAGAC+TGG + chr1_1:57902210-57902229 Msa0031200:intron 35.0%
GGGAAGTAAATCGTAAATCA+TGG - chr1_1:57902501-57902520 None:intergenic 35.0%
! CAAATCCTCCATAAAAGCAT+TGG - chr1_1:57902701-57902720 None:intergenic 35.0%
GTGTCTATCTATCCTGTTTA+TGG + chr1_1:57902812-57902831 Msa0031200:intron 35.0%
AGGGAATCATATCCATAAAC+AGG - chr1_1:57902827-57902846 None:intergenic 35.0%
TTCTTAAGTGTTTCACATGG+AGG - chr1_1:57902883-57902902 None:intergenic 35.0%
TTGAAGTTGAACCAAATGCA+GGG - chr1_1:57903520-57903539 None:intergenic 35.0%
ATGTCAAATACCACTGTGTT+TGG + chr1_1:57903575-57903594 Msa0031200:CDS 35.0%
TGGAACCAAAACTAAAACCT+GGG - chr1_1:57903703-57903722 None:intergenic 35.0%
ACTTTGACCTCCAAAATTAG+AGG - chr1_1:57903789-57903808 None:intergenic 35.0%
!! CATTTGGAAGTACTGGTATT+GGG + chr1_1:57903936-57903955 Msa0031200:CDS 35.0%
TTACAAAGATAAAAGCCACG+AGG + chr1_1:57904081-57904100 Msa0031200:CDS 35.0%
GACTATCAATTGGGAGATAA+AGG + chr1_1:57904118-57904137 Msa0031200:CDS 35.0%
! ACGACACAGACAAATGTTTT+TGG + chr1_1:57904287-57904306 Msa0031200:CDS 35.0%
!! TGTGCAAATGGGTTAGAATT+AGG - chr1_1:57904350-57904369 None:intergenic 35.0%
! CCAAATGTCTTTTGTGCAAA+TGG - chr1_1:57904362-57904381 None:intergenic 35.0%
CCATTTGCACAAAAGACATT+TGG + chr1_1:57904359-57904378 Msa0031200:CDS 35.0%
ATGTTCAATCAACCTTCATC+TGG + chr1_1:57904680-57904699 Msa0031200:CDS 35.0%
!! GTATTGACTCCATCTTATCT+TGG - chr1_1:57904839-57904858 None:intergenic 35.0%
!! TCTTAATGGATTAGGCTGTT+AGG - chr1_1:57905063-57905082 None:intergenic 35.0%
!! TCAGTACGTTGTCCATTTTT+AGG + chr1_1:57905347-57905366 Msa0031200:intron 35.0%
AAATGAAAGGTAGTGCAAAC+TGG - chr1_1:57905418-57905437 None:intergenic 35.0%
! AAAGAAGGTGTAGATTGGAA+AGG - chr1_1:57905491-57905510 None:intergenic 35.0%
! ATTGGAAAGAAGGTGTAGAT+TGG - chr1_1:57905496-57905515 None:intergenic 35.0%
ATCTACACCTTCTTTCCAAT+CGG + chr1_1:57905496-57905515 Msa0031200:CDS 35.0%
! ACCTTTTCCTTTAGCAACTT+TGG + chr1_1:57905524-57905543 Msa0031200:CDS 35.0%
GTTGTTCATGCAATGATTGA+AGG + chr1_1:57905600-57905619 Msa0031200:intron 35.0%
CTGTCAAACATAAAACATCC+AGG - chr1_1:57905922-57905941 None:intergenic 35.0%
! CTGGATGTTTTATGTTTGAC+AGG + chr1_1:57905920-57905939 Msa0031200:intron 35.0%
! GTTCCAAATGGGTTTGTAAT+GGG - chr1_1:57905982-57906001 None:intergenic 35.0%
! TGTTCCAAATGGGTTTGTAA+TGG - chr1_1:57905983-57906002 None:intergenic 35.0%
GCTAGAGATACCATATTGAA+CGG - chr1_1:57906055-57906074 None:intergenic 35.0%
GAAGAGTCAAGTTTCCTATA+AGG + chr1_1:57906326-57906345 Msa0031200:CDS 35.0%
ATACAAGAATGAGGGATCAA+AGG + chr1_1:57906351-57906370 Msa0031200:CDS 35.0%
! GATTTTCCCTAGGAATGAAA+AGG - chr1_1:57906513-57906532 None:intergenic 35.0%
!!! TGAGAAAGCATCCTCTTTTA+AGG + chr1_1:57906582-57906601 Msa0031200:CDS 35.0%
GGTGTATCTATCCTTAAAAG+AGG - chr1_1:57906596-57906615 None:intergenic 35.0%
! CTTACGTTTAGAATACAGCA+TGG + chr1_1:57906698-57906717 Msa0031200:intron 35.0%
TTAGGTATAAAGACCAGAGA+AGG + chr1_1:57906781-57906800 Msa0031200:intron 35.0%
ATTTGTGAGTATTCCTTCTC+TGG - chr1_1:57906797-57906816 None:intergenic 35.0%
GCTAATGTGACACTCAATAT+GGG - chr1_1:57907290-57907309 None:intergenic 35.0%
TGCTAATGTGACACTCAATA+TGG - chr1_1:57907291-57907310 None:intergenic 35.0%
TTGAGTGTCACATTAGCAAA+CGG + chr1_1:57907293-57907312 Msa0031200:intron 35.0%
CTAAAGTGACACTCAATATG+TGG + chr1_1:57907497-57907516 Msa0031200:intron 35.0%
ATATGTACAAGACACTCAGT+GGG + chr1_1:57907750-57907769 Msa0031200:CDS 35.0%
! TTATGGCAGCATCAGATTTT+TGG + chr1_1:57907952-57907971 Msa0031200:CDS 35.0%
! TATGGCAGCATCAGATTTTT+GGG + chr1_1:57907953-57907972 Msa0031200:CDS 35.0%
TGTTCAGTTTAACAATCGTG+AGG + chr1_1:57908012-57908031 Msa0031200:CDS 35.0%
TAAAGAGATGCTCAAGAGAA+AGG + chr1_1:57908177-57908196 Msa0031200:CDS 35.0%
ATGATCCCAATAAAGGAGAA+TGG + chr1_1:57908230-57908249 Msa0031200:CDS 35.0%
GAACTTCCATTCTCCTTTAT+TGG - chr1_1:57908239-57908258 None:intergenic 35.0%
ATAAAGGAGAATGGAAGTTC+AGG + chr1_1:57908239-57908258 Msa0031200:CDS 35.0%
TAAAGGAGAATGGAAGTTCA+GGG + chr1_1:57908240-57908259 Msa0031200:CDS 35.0%
GGATACAAGCTGATGTATAA+AGG + chr1_1:57908305-57908324 Msa0031200:CDS 35.0%
CCTCTCCCATATTGTTATAT+GGG - chr1_1:57908341-57908360 None:intergenic 35.0%
TCCTCTCCCATATTGTTATA+TGG - chr1_1:57908342-57908361 None:intergenic 35.0%
AAAGGACATATCAACAAGGT+TGG - chr1_1:57908471-57908490 None:intergenic 35.0%
GCAAAAAGGACATATCAACA+AGG - chr1_1:57908475-57908494 None:intergenic 35.0%
CTTCACCAGTTAAAAGACAA+CGG - chr1_1:57908556-57908575 None:intergenic 35.0%
AGATCTGCGAGAAGAGATTA+GGG - chr1_1:57901156-57901175 None:intergenic 40.0%
TAGATCTGCGAGAAGAGATT+AGG - chr1_1:57901157-57901176 None:intergenic 40.0%
! GTTGTTGTTGATTGCAGTTG+GGG + chr1_1:57901374-57901393 Msa0031200:intron 40.0%
ATTGCAGTTGGGGATTATCT+AGG + chr1_1:57901384-57901403 Msa0031200:intron 40.0%
! AACATAGATTGGTCCCACAT+AGG - chr1_1:57901671-57901690 None:intergenic 40.0%
! CTTTTGCACCTAAGCCATTT+GGG + chr1_1:57901837-57901856 Msa0031200:CDS 40.0%
! AGCTTTTGGTACTTCAATGC+CGG + chr1_1:57901988-57902007 Msa0031200:CDS 40.0%
GATGACGAATTACCAAAAGC+CGG - chr1_1:57902034-57902053 None:intergenic 40.0%
GGTAATTCGTCATCGTCATT+TGG + chr1_1:57902040-57902059 Msa0031200:CDS 40.0%
AATTCGTCATCGTCATTTGG+TGG + chr1_1:57902043-57902062 Msa0031200:CDS 40.0%
!! TTTGGTGGTAGGCTTTTCTA+TGG + chr1_1:57902058-57902077 Msa0031200:intron 40.0%
! GTGCTTAGCCAATGCTTTTA+TGG + chr1_1:57902690-57902709 Msa0031200:intron 40.0%
! CTTAGCCAATGCTTTTATGG+AGG + chr1_1:57902693-57902712 Msa0031200:intron 40.0%
TAAGTGTTTCACATGGAGGT+GGG - chr1_1:57902879-57902898 None:intergenic 40.0%
TTAAGTGTTTCACATGGAGG+TGG - chr1_1:57902880-57902899 None:intergenic 40.0%
! TTTGGTCAGAAGCCTTCTTT+TGG + chr1_1:57903173-57903192 Msa0031200:CDS 40.0%
!! AAGCCTTCTTTTGGAGGTTT+TGG + chr1_1:57903182-57903201 Msa0031200:CDS 40.0%
! CCAAATGGACTTGTTTGAGT+AGG - chr1_1:57903215-57903234 None:intergenic 40.0%
CCTACTCAAACAAGTCCATT+TGG + chr1_1:57903212-57903231 Msa0031200:CDS 40.0%
! AAATGCTGGTTGTGATGGTT+GGG - chr1_1:57903246-57903265 None:intergenic 40.0%
! AATATGCTGCTTCCAAATGC+TGG - chr1_1:57903293-57903312 None:intergenic 40.0%
GCATTTGGAAGCAGCATATT+TGG + chr1_1:57903293-57903312 Msa0031200:CDS 40.0%
TGAAGTTGAACCAAATGCAG+GGG - chr1_1:57903519-57903538 None:intergenic 40.0%
GTTGAAGTTGAACCAAATGC+AGG - chr1_1:57903521-57903540 None:intergenic 40.0%
! TCAACTTCAACCTCAGCTTT+TGG + chr1_1:57903530-57903549 Msa0031200:CDS 40.0%
TCAAATACCACTGTGTTTGG+TGG + chr1_1:57903578-57903597 Msa0031200:CDS 40.0%
GTGCTTGATGAACCAAATAC+AGG - chr1_1:57903632-57903651 None:intergenic 40.0%
GGAACCAAAACTAAAACCTG+GGG - chr1_1:57903702-57903721 None:intergenic 40.0%
GTGGAACCAAAACTAAAACC+TGG - chr1_1:57903704-57903723 None:intergenic 40.0%
GAACTAGACTGACTAAAAGC+CGG - chr1_1:57903731-57903750 None:intergenic 40.0%
!! AGTCAGTCTAGTTCTGCATT+TGG + chr1_1:57903737-57903756 Msa0031200:CDS 40.0%
! AGTACGACCTCTAATTTTGG+AGG + chr1_1:57903779-57903798 Msa0031200:CDS 40.0%
GTACTTCCAAATGCTTGAGT+GGG - chr1_1:57903929-57903948 None:intergenic 40.0%
AGTACTTCCAAATGCTTGAG+TGG - chr1_1:57903930-57903949 None:intergenic 40.0%
! ACTCAAGCATTTGGAAGTAC+TGG + chr1_1:57903929-57903948 Msa0031200:CDS 40.0%
!! GCATTTGGAAGTACTGGTAT+TGG + chr1_1:57903935-57903954 Msa0031200:CDS 40.0%
AAGATGGGAGGACTATCAAT+TGG + chr1_1:57904108-57904127 Msa0031200:CDS 40.0%
AGATGGGAGGACTATCAATT+GGG + chr1_1:57904109-57904128 Msa0031200:CDS 40.0%
! TGTGCTACTAGAGAAAGGAT+TGG - chr1_1:57904324-57904343 None:intergenic 40.0%
GATGATGAAGAAGGAAATGC+TGG - chr1_1:57904410-57904429 None:intergenic 40.0%
AGTGTTAAATAGGCTTGGCT+GGG - chr1_1:57904579-57904598 None:intergenic 40.0%
AAGTGTTAAATAGGCTTGGC+TGG - chr1_1:57904580-57904599 None:intergenic 40.0%
!! GCAGAAGTGTTAAATAGGCT+TGG - chr1_1:57904584-57904603 None:intergenic 40.0%
!! TAGGGGCAGAAGTGTTAAAT+AGG - chr1_1:57904589-57904608 None:intergenic 40.0%
AACCAGACTGTGCATTTGTA+GGG - chr1_1:57904607-57904626 None:intergenic 40.0%
AAACCAGACTGTGCATTTGT+AGG - chr1_1:57904608-57904627 None:intergenic 40.0%
!! ACAAATGCACAGTCTGGTTT+TGG + chr1_1:57904608-57904627 Msa0031200:CDS 40.0%
GTCAGAATACCTCCCAATTT+GGG + chr1_1:57904630-57904649 Msa0031200:CDS 40.0%
! GAAGGTTGATTGAACATGCT+TGG - chr1_1:57904677-57904696 None:intergenic 40.0%
GAGCATTAGATGTGAGTGAT+GGG - chr1_1:57904724-57904743 None:intergenic 40.0%
AGTAAAACCATCCTGTTAGG+TGG + chr1_1:57905011-57905030 Msa0031200:intron 40.0%
GAGGATGTCTCAACTTGATT+AGG + chr1_1:57905138-57905157 Msa0031200:intron 40.0%
CACATATAGTTCTCTACACC+AGG - chr1_1:57905181-57905200 None:intergenic 40.0%
!! AGATTGGAAAGGTGTTGACA+TGG - chr1_1:57905480-57905499 None:intergenic 40.0%
GCCAAAGTTGCTAAAGGAAA+AGG - chr1_1:57905528-57905547 None:intergenic 40.0%
GCTCAAACTCAAAGCATGTT+TGG + chr1_1:57905690-57905709 Msa0031200:CDS 40.0%
CGAGAAAAGTCACTGTCATT+TGG - chr1_1:57905808-57905827 None:intergenic 40.0%
TTGTGCAACCATAGAACTCT+GGG - chr1_1:57905953-57905972 None:intergenic 40.0%
!! AAGCAGGAAGTGTTCCAAAT+GGG - chr1_1:57905993-57906012 None:intergenic 40.0%
!! AAAGCAGGAAGTGTTCCAAA+TGG - chr1_1:57905994-57906013 None:intergenic 40.0%
GAGATACCATATTGAACGGA+AGG - chr1_1:57906051-57906070 None:intergenic 40.0%
!! CTATGATCAACCTTTTTGGG+TGG + chr1_1:57906186-57906205 Msa0031200:intron 40.0%
! TCAAACTGACCCTTCTTTTC+AGG + chr1_1:57906240-57906259 Msa0031200:intron 40.0%
TACAGTAGCAGGTTTGTCTT+GGG - chr1_1:57906266-57906285 None:intergenic 40.0%
TTACAGTAGCAGGTTTGTCT+TGG - chr1_1:57906267-57906286 None:intergenic 40.0%
GAGGATATTCTTACAGTAGC+AGG - chr1_1:57906277-57906296 None:intergenic 40.0%
ACTTGACTCTTCTTTGTGAG+AGG - chr1_1:57906318-57906337 None:intergenic 40.0%
! TGATGCCCTTTTCATTCCTA+GGG + chr1_1:57906504-57906523 Msa0031200:CDS 40.0%
TCATTCCTAGGGAAAATCCA+AGG + chr1_1:57906515-57906534 Msa0031200:CDS 40.0%
CATTCCTAGGGAAAATCCAA+GGG + chr1_1:57906516-57906535 Msa0031200:CDS 40.0%
GACAGTACCATTCTCATTCA+CGG - chr1_1:57906620-57906639 None:intergenic 40.0%
!! TGGACTGTTTTGTTGAACCT+TGG + chr1_1:57907198-57907217 Msa0031200:intron 40.0%
!! ACTGTTTTGTTGAACCTTGG+TGG + chr1_1:57907201-57907220 Msa0031200:intron 40.0%
ATGTGACACTCAATATGGGA+CGG - chr1_1:57907286-57907305 None:intergenic 40.0%
TGACACTCAATATGTGGCAA+TGG + chr1_1:57907503-57907522 Msa0031200:intron 40.0%
!! AGCTGAAAATGGTGTTGTCA+AGG + chr1_1:57907652-57907671 Msa0031200:CDS 40.0%
ATGGTCTTCGTTATTCCCAT+TGG - chr1_1:57907714-57907733 None:intergenic 40.0%
GATATGTACAAGACACTCAG+TGG + chr1_1:57907749-57907768 Msa0031200:CDS 40.0%
AGCTCCATGTTCATACACAA+TGG - chr1_1:57907795-57907814 None:intergenic 40.0%
ACTGCCTCGTATTCATGAAT+TGG + chr1_1:57907862-57907881 Msa0031200:CDS 40.0%
TATTCATGAATTGGCGGCTA+AGG + chr1_1:57907871-57907890 Msa0031200:CDS 40.0%
TCGTGAGGTGATTGTATACA+TGG + chr1_1:57908027-57908046 Msa0031200:CDS 40.0%
GATTCAAAGAAACCTCCTGT+TGG + chr1_1:57908052-57908071 Msa0031200:CDS 40.0%
ATGATACAAACTCAGCACCT+TGG - chr1_1:57908210-57908229 None:intergenic 40.0%
CCCATATAACAATATGGGAG+AGG + chr1_1:57908338-57908357 Msa0031200:three_prime_UTR 40.0%
! GAGACAGAAATTTTCATCCC+TGG - chr1_1:57908586-57908605 None:intergenic 40.0%
ATTAGTTACCGGGATCGAAC+CGG + chr1_1:57901593-57901612 Msa0031200:intron 45.0%
CCAAATGGCTTAGGTGCAAA+AGG - chr1_1:57901839-57901858 None:intergenic 45.0%
! CCTTTTGCACCTAAGCCATT+TGG + chr1_1:57901836-57901855 Msa0031200:CDS 45.0%
AATGGAGTTGGACTCCCAAA+TGG - chr1_1:57901854-57901873 None:intergenic 45.0%
TTTGGGAGTCCAACTCCATT+TGG + chr1_1:57901854-57901873 Msa0031200:CDS 45.0%
TCCATTTGGATCGCAGCAAA+CGG + chr1_1:57901868-57901887 Msa0031200:CDS 45.0%
CAAACGGGTAATTCCGTGTT+TGG + chr1_1:57901884-57901903 Msa0031200:CDS 45.0%
TTGGAAGAAAACGGAGACGA+TGG - chr1_1:57901944-57901963 None:intergenic 45.0%
!! TGATGAAGCGCCGAAAGTAT+TGG - chr1_1:57901963-57901982 None:intergenic 45.0%
! GCTTCATCATCTCCAGCTTT+TGG + chr1_1:57901974-57901993 Msa0031200:CDS 45.0%
! GGCATTGAAGTACCAAAAGC+TGG - chr1_1:57901989-57902008 None:intergenic 45.0%
GTACTTCAATGCCGGCATTT+GGG + chr1_1:57901996-57902015 Msa0031200:CDS 45.0%
TACTTCAATGCCGGCATTTG+GGG + chr1_1:57901997-57902016 Msa0031200:CDS 45.0%
! ATTTGGGGCATCTTCAACTC+CGG + chr1_1:57902012-57902031 Msa0031200:CDS 45.0%
AAGTGTTTCACATGGAGGTG+GGG - chr1_1:57902878-57902897 None:intergenic 45.0%
GAGCCAAAACCTCCAAAAGA+AGG - chr1_1:57903188-57903207 None:intergenic 45.0%
! CAAATGCTGGTTGTGATGGT+TGG - chr1_1:57903247-57903266 None:intergenic 45.0%
CAACCATCACAACCAGCATT+TGG + chr1_1:57903245-57903264 Msa0031200:CDS 45.0%
! CTTCCAAATGCTGGTTGTGA+TGG - chr1_1:57903251-57903270 None:intergenic 45.0%
!! TGGGTGTTACTTCCAAATGC+TGG - chr1_1:57903260-57903279 None:intergenic 45.0%
! AAATGCTGGTTGCGACTGTT+GGG - chr1_1:57903279-57903298 None:intergenic 45.0%
!! ACCTCAGCTTTTGGTAACAC+AGG + chr1_1:57903539-57903558 Msa0031200:CDS 45.0%
!! CCTCAGCTTTTGGTAACACA+GGG + chr1_1:57903540-57903559 Msa0031200:CDS 45.0%
!! CTCAGCTTTTGGTAACACAG+GGG + chr1_1:57903541-57903560 Msa0031200:CDS 45.0%
!! TCAGCTTTTGGTAACACAGG+GGG + chr1_1:57903542-57903561 Msa0031200:CDS 45.0%
! AATACCACTGTGTTTGGTGG+TGG + chr1_1:57903581-57903600 Msa0031200:CDS 45.0%
GCTTCAAGCAGTCCTGTATT+TGG + chr1_1:57903617-57903636 Msa0031200:CDS 45.0%
!!! AGTGCCCCAGGTTTTAGTTT+TGG + chr1_1:57903695-57903714 Msa0031200:CDS 45.0%
!!! TAGTTTTGGTTCCACCACTC+CGG + chr1_1:57903709-57903728 Msa0031200:CDS 45.0%
TAGAGGTCGTACTCCCAAAT+GGG - chr1_1:57903772-57903791 None:intergenic 45.0%
TTAGAGGTCGTACTCCCAAA+TGG - chr1_1:57903773-57903792 None:intergenic 45.0%
!! GGGAGTACGACCTCTAATTT+TGG + chr1_1:57903776-57903795 Msa0031200:CDS 45.0%
GGAGGTCAAAGTTCTGCATT+TGG + chr1_1:57903797-57903816 Msa0031200:CDS 45.0%
AGTCAGGATTTGGAGGTCAA+CGG + chr1_1:57903960-57903979 Msa0031200:CDS 45.0%
AGCTAGTTACTCAGCTACAG+TGG + chr1_1:57903997-57904016 Msa0031200:CDS 45.0%
GTCGTAGACGAATTAAAGCC+TGG - chr1_1:57904272-57904291 None:intergenic 45.0%
! CTACTAGAGAAAGGATTGGC+TGG - chr1_1:57904320-57904339 None:intergenic 45.0%
! GGTGTTGTGCTACTAGAGAA+AGG - chr1_1:57904329-57904348 None:intergenic 45.0%
AGGAAATGCTGGTGAACTGA+AGG - chr1_1:57904399-57904418 None:intergenic 45.0%
! GCTGCTGATGATGATGAAGA+AGG - chr1_1:57904419-57904438 None:intergenic 45.0%
GCGGGTGTTCCAAAAATAGA+GGG - chr1_1:57904446-57904465 None:intergenic 45.0%
TGCGGGTGTTCCAAAAATAG+AGG - chr1_1:57904447-57904466 None:intergenic 45.0%
TCATCTACATCCCTGTTTGG+TGG + chr1_1:57904509-57904528 Msa0031200:CDS 45.0%
ACCAGACTGTGCATTTGTAG+GGG - chr1_1:57904606-57904625 None:intergenic 45.0%
GGTCAGAATACCTCCCAATT+TGG + chr1_1:57904629-57904648 Msa0031200:CDS 45.0%
AGCACCAGTTTGCCCAAATT+GGG - chr1_1:57904645-57904664 None:intergenic 45.0%
AAGCACCAGTTTGCCCAAAT+TGG - chr1_1:57904646-57904665 None:intergenic 45.0%
GAGAAAAGGCTTCCAGATGA+AGG - chr1_1:57904695-57904714 None:intergenic 45.0%
! GGAGCATTAGATGTGAGTGA+TGG - chr1_1:57904725-57904744 None:intergenic 45.0%
! TCTAATGCTCCGACAGGTTT+TGG + chr1_1:57904734-57904753 Msa0031200:CDS 45.0%
AAGCCATATCCTGTTAGGCA+GGG + chr1_1:57904959-57904978 Msa0031200:intron 45.0%
AAAACCATCCTGTTAGGTGG+TGG + chr1_1:57905014-57905033 Msa0031200:intron 45.0%
TATACCACCACCTAACAGGA+TGG - chr1_1:57905021-57905040 None:intergenic 45.0%
GGTTTATACCACCACCTAAC+AGG - chr1_1:57905025-57905044 None:intergenic 45.0%
GTTAGGTATTCGCACTGAGA+TGG - chr1_1:57905046-57905065 None:intergenic 45.0%
! CTCATAACTGACGTTTTCCC+AGG - chr1_1:57905121-57905140 None:intergenic 45.0%
CTGGGAAAACGTCAGTTATG+AGG + chr1_1:57905119-57905138 Msa0031200:intron 45.0%
GCTATCTAAACCTGTAGACC+TGG + chr1_1:57905160-57905179 Msa0031200:intron 45.0%
!! AGTGCAAACTGGAGTTGGTA+TGG - chr1_1:57905407-57905426 None:intergenic 45.0%
AAGGTAGTGCAAACTGGAGT+TGG - chr1_1:57905412-57905431 None:intergenic 45.0%
!! TGGAAAGGTGTTGACATGGA+CGG - chr1_1:57905476-57905495 None:intergenic 45.0%
TGTCTGGCCAAAGTTGCTAA+AGG - chr1_1:57905534-57905553 None:intergenic 45.0%
TGAACTAACCAGGTTGTGTC+TGG - chr1_1:57905550-57905569 None:intergenic 45.0%
! GACTTTTCTCGTACTGTCGT+TGG + chr1_1:57905817-57905836 Msa0031200:intron 45.0%
TGTGCAACCATAGAACTCTG+GGG - chr1_1:57905952-57905971 None:intergenic 45.0%
CTTGTGCAACCATAGAACTC+TGG - chr1_1:57905954-57905973 None:intergenic 45.0%
GCACCCATTACAAACCCATT+TGG + chr1_1:57905976-57905995 Msa0031200:CDS 45.0%
CAGATGTCAATTGGTCGAGT+TGG + chr1_1:57906018-57906037 Msa0031200:CDS 45.0%
ACCACTCCTTCCGTTCAATA+TGG + chr1_1:57906042-57906061 Msa0031200:CDS 45.0%
ACCATATTGAACGGAAGGAG+TGG - chr1_1:57906046-57906065 None:intergenic 45.0%
TGTCTTGGGCCTGAAAAGAA+GGG - chr1_1:57906252-57906271 None:intergenic 45.0%
TTGTCTTGGGCCTGAAAAGA+AGG - chr1_1:57906253-57906272 None:intergenic 45.0%
TGACTCTTCTTTGTGAGAGG+TGG - chr1_1:57906315-57906334 None:intergenic 45.0%
AGATACTCCAACCACACCAA+AGG + chr1_1:57906480-57906499 Msa0031200:CDS 45.0%
!! ATGAAAAGGGCATCAGCCTT+TGG - chr1_1:57906499-57906518 None:intergenic 45.0%
! CTGATGCCCTTTTCATTCCT+AGG + chr1_1:57906503-57906522 Msa0031200:CDS 45.0%
TACACCTCCGTGAATGAGAA+TGG + chr1_1:57906610-57906629 Msa0031200:CDS 45.0%
AGTACCATTCTCATTCACGG+AGG - chr1_1:57906617-57906636 None:intergenic 45.0%
! CATACTCTCTTTTTCCTCCG+AGG - chr1_1:57907112-57907131 None:intergenic 45.0%
CAAATGAAGCACAACCACCA+AGG - chr1_1:57907218-57907237 None:intergenic 45.0%
CCAAAATAAGGGACTGATGG+AGG - chr1_1:57907584-57907603 None:intergenic 45.0%
!! CCTCCATCAGTCCCTTATTT+TGG + chr1_1:57907581-57907600 Msa0031200:intron 45.0%
GCACCAAAATAAGGGACTGA+TGG - chr1_1:57907587-57907606 None:intergenic 45.0%
TTAGGGACTGCAGCTGAAAA+TGG + chr1_1:57907641-57907660 Msa0031200:intron 45.0%
CTACGAAGCATGCATCCAAT+GGG + chr1_1:57907696-57907715 Msa0031200:CDS 45.0%
CGAAGACCATTCTCTGCAAA+AGG + chr1_1:57907724-57907743 Msa0031200:CDS 45.0%
AGACCATTCTCTGCAAAAGG+CGG + chr1_1:57907727-57907746 Msa0031200:CDS 45.0%
! TATCCGCCTTTTGCAGAGAA+TGG - chr1_1:57907733-57907752 None:intergenic 45.0%
GCTGCCATTGTGTATGAACA+TGG + chr1_1:57907788-57907807 Msa0031200:CDS 45.0%
TGAACATGGAGCTGATGTTG+AGG + chr1_1:57907802-57907821 Msa0031200:CDS 45.0%
GCCTCGTATTCATGAATTGG+CGG + chr1_1:57907865-57907884 Msa0031200:CDS 45.0%
TTGACATGACTGCAGAATCC+TGG - chr1_1:57907908-57907927 None:intergenic 45.0%
AGGATTCTGCAGTCATGTCA+AGG + chr1_1:57907907-57907926 Msa0031200:CDS 45.0%
CATGTCAAGGACTTTGTCGT+TGG + chr1_1:57907920-57907939 Msa0031200:CDS 45.0%
TCAAGGACTTTGTCGTTGGA+AGG + chr1_1:57907924-57907943 Msa0031200:CDS 45.0%
AAGAAACCTCCTGTTGGACA+AGG + chr1_1:57908058-57908077 Msa0031200:CDS 45.0%
AGAAACCTCCTGTTGGACAA+GGG + chr1_1:57908059-57908078 Msa0031200:CDS 45.0%
TTATTCAGCCCTTGTCCAAC+AGG - chr1_1:57908070-57908089 None:intergenic 45.0%
TACACTGAAGGACCGAGAAT+CGG + chr1_1:57908148-57908167 Msa0031200:CDS 45.0%
AGCTGGTAGATGAAGACAGT+TGG + chr1_1:57908284-57908303 Msa0031200:CDS 45.0%
! TCTATTTTGTGGACAGAGCC+AGG + chr1_1:57908444-57908463 Msa0031200:three_prime_UTR 45.0%
! CTATTTTGTGGACAGAGCCA+GGG + chr1_1:57908445-57908464 Msa0031200:three_prime_UTR 45.0%
AACTGGTGAAGTTTAGTGCC+AGG + chr1_1:57908565-57908584 Msa0031200:three_prime_UTR 45.0%
ACTGGTGAAGTTTAGTGCCA+GGG + chr1_1:57908566-57908585 Msa0031200:three_prime_UTR 45.0%
!! ATTATTATTATTATATTTGT+AGG + chr1_1:57901509-57901528 Msa0031200:intron 5.0%
!! TTATTATTATTATATTTGTA+GGG + chr1_1:57901510-57901529 Msa0031200:intron 5.0%
!! ATAATATAAAAACAATAAAA+AGG - chr1_1:57903089-57903108 None:intergenic 5.0%
!!! AAATTATTATATATCTTTTT+TGG + chr1_1:57905777-57905796 Msa0031200:intron 5.0%
!!! AATTATTATATATCTTTTTT+GGG + chr1_1:57905778-57905797 Msa0031200:intron 5.0%
!! AAAAAAAAAAAACATTTAAT+TGG - chr1_1:57905897-57905916 None:intergenic 5.0%
!! AAATTAAAAAAATAAGTTTA+TGG - chr1_1:57906929-57906948 None:intergenic 5.0%
!!! TTATTAATATTTTTATTCAT+AGG + chr1_1:57907140-57907159 Msa0031200:intron 5.0%
TTAGTTACCGGGATCGAACC+GGG + chr1_1:57901594-57901613 Msa0031200:intron 50.0%
TTGGTCCCACATAGGTAGCT+CGG - chr1_1:57901663-57901682 None:intergenic 50.0%
GTTGGACTCCCAAATGGCTT+AGG - chr1_1:57901848-57901867 None:intergenic 50.0%
TGCTGCGATCCAAATGGAGT+TGG - chr1_1:57901866-57901885 None:intergenic 50.0%
CCATTTGGATCGCAGCAAAC+GGG + chr1_1:57901869-57901888 Msa0031200:CDS 50.0%
ACGGGTAATTCCGTGTTTGG+TGG + chr1_1:57901887-57901906 Msa0031200:CDS 50.0%
!! GGTGGAAGTACCACCAAACA+CGG - chr1_1:57901900-57901919 None:intergenic 50.0%
! GTGTTTGGTGGTACTTCCAC+CGG + chr1_1:57901899-57901918 Msa0031200:CDS 50.0%
GGTACTTCCACCGGTGTATT+TGG + chr1_1:57901908-57901927 Msa0031200:CDS 50.0%
GGTACTTCAATGCCGGCATT+TGG + chr1_1:57901995-57902014 Msa0031200:CDS 50.0%
GTTGAAGATGCCCCAAATGC+CGG - chr1_1:57902010-57902029 None:intergenic 50.0%
! GCATCTTCAACTCCGGCTTT+TGG + chr1_1:57902019-57902038 Msa0031200:CDS 50.0%
! CGTCATCGTCATTTGGTGGT+AGG + chr1_1:57902047-57902066 Msa0031200:intron 50.0%
GGAATATGAAGGTGGGGGAA+GGG - chr1_1:57902846-57902865 None:intergenic 50.0%
TGGAATATGAAGGTGGGGGA+AGG - chr1_1:57902847-57902866 None:intergenic 50.0%
AGGGGGTGGAATATGAAGGT+GGG - chr1_1:57902853-57902872 None:intergenic 50.0%
AAGGGGGTGGAATATGAAGG+TGG - chr1_1:57902854-57902873 None:intergenic 50.0%
AGTGTTTCACATGGAGGTGG+GGG - chr1_1:57902877-57902896 None:intergenic 50.0%
! GGTCAGAAGCCTTCTTTTGG+AGG + chr1_1:57903176-57903195 Msa0031200:CDS 50.0%
! CAAATGCTGGTTGCGACTGT+TGG - chr1_1:57903280-57903299 None:intergenic 50.0%
CAACAGTCGCAACCAGCATT+TGG + chr1_1:57903278-57903297 Msa0031200:CDS 50.0%
GGTTCCTCAACACCAGCATT+TGG + chr1_1:57903314-57903333 Msa0031200:CDS 50.0%
! CGAACCAAATGCTGGTGTTG+AGG - chr1_1:57903321-57903340 None:intergenic 50.0%
! ACACCAGCATTTGGTTCGAC+AGG + chr1_1:57903323-57903342 Msa0031200:CDS 50.0%
CCCTGTGTTACCAAAAGCTG+AGG - chr1_1:57903543-57903562 None:intergenic 50.0%
TCATCAAGCACGCCTGCATT+TGG + chr1_1:57903641-57903660 Msa0031200:CDS 50.0%
CATCAAGCACGCCTGCATTT+GGG + chr1_1:57903642-57903661 Msa0031200:CDS 50.0%
ATCAAGCACGCCTGCATTTG+GGG + chr1_1:57903643-57903662 Msa0031200:CDS 50.0%
!! GCACTAGAAGCACCAAAAGC+AGG - chr1_1:57903680-57903699 None:intergenic 50.0%
AGACTGACTAAAAGCCGGAG+TGG - chr1_1:57903726-57903745 None:intergenic 50.0%
CAGACTCCCACTCAAGCATT+TGG + chr1_1:57903920-57903939 Msa0031200:CDS 50.0%
!! AGTACTGGTATTGGGCAGTC+AGG + chr1_1:57903944-57903963 Msa0031200:CDS 50.0%
! GGTATTGGGCAGTCAGGATT+TGG + chr1_1:57903950-57903969 Msa0031200:CDS 50.0%
ATTGGGCAGTCAGGATTTGG+AGG + chr1_1:57903953-57903972 Msa0031200:CDS 50.0%
GTCAGGATTTGGAGGTCAAC+GGG + chr1_1:57903961-57903980 Msa0031200:CDS 50.0%
TCAGGATTTGGAGGTCAACG+GGG + chr1_1:57903962-57903981 Msa0031200:CDS 50.0%
GCTACAGTGGAAGCAGATAG+TGG + chr1_1:57904010-57904029 Msa0031200:CDS 50.0%
AAAGCCACGAGGAGCTAAGA+TGG + chr1_1:57904092-57904111 Msa0031200:CDS 50.0%
AAGCCACGAGGAGCTAAGAT+GGG + chr1_1:57904093-57904112 Msa0031200:CDS 50.0%
AAGCCTGGCATACCAGTTGA+CGG - chr1_1:57904257-57904276 None:intergenic 50.0%
AATGCTGGTGAACTGAAGGC+AGG - chr1_1:57904395-57904414 None:intergenic 50.0%
! GCAGCAGCACCCTCTATTTT+TGG + chr1_1:57904434-57904453 Msa0031200:CDS 50.0%
AGGGATGTAGATGACCCAAC+TGG - chr1_1:57904503-57904522 None:intergenic 50.0%
GGGTCATCTACATCCCTGTT+TGG + chr1_1:57904506-57904525 Msa0031200:CDS 50.0%
! ACATCCCTGTTTGGTGGTCA+AGG + chr1_1:57904515-57904534 Msa0031200:CDS 50.0%
TGTGCCTTGACCACCAAACA+GGG - chr1_1:57904522-57904541 None:intergenic 50.0%
ATGTGCCTTGACCACCAAAC+AGG - chr1_1:57904523-57904542 None:intergenic 50.0%
ACCTCCCAATTTGGGCAAAC+TGG + chr1_1:57904638-57904657 Msa0031200:CDS 50.0%
ACCAGTTTGCCCAAATTGGG+AGG - chr1_1:57904642-57904661 None:intergenic 50.0%
!! GTGATGGGCTGCTTGAGAAA+AGG - chr1_1:57904709-57904728 None:intergenic 50.0%
CTCACATCTAATGCTCCGAC+AGG + chr1_1:57904728-57904747 Msa0031200:CDS 50.0%
GCTGCTTGTCCAAAACCTGT+CGG - chr1_1:57904746-57904765 None:intergenic 50.0%
!!! GACAGGTTTTGGACAAGCAG+CGG + chr1_1:57904745-57904764 Msa0031200:CDS 50.0%
!! AACAGGATATGGCTTGGTGG+AGG - chr1_1:57904954-57904973 None:intergenic 50.0%
! CCTAACAGGATATGGCTTGG+TGG - chr1_1:57904957-57904976 None:intergenic 50.0%
CCACCAAGCCATATCCTGTT+AGG + chr1_1:57904954-57904973 Msa0031200:intron 50.0%
CTGCCTAACAGGATATGGCT+TGG - chr1_1:57904960-57904979 None:intergenic 50.0%
CAAGCCATATCCTGTTAGGC+AGG + chr1_1:57904958-57904977 Msa0031200:intron 50.0%
CAACCCTGCCTAACAGGATA+TGG - chr1_1:57904965-57904984 None:intergenic 50.0%
ACAAGACAACCCTGCCTAAC+AGG - chr1_1:57904971-57904990 None:intergenic 50.0%
TGTTAGGCAGGGTTGTCTTG+TGG + chr1_1:57904970-57904989 Msa0031200:intron 50.0%
GTTCTCTACACCAGGTCTAC+AGG - chr1_1:57905173-57905192 None:intergenic 50.0%
ACACCTTCTTTCCAATCGGC+TGG + chr1_1:57905500-57905519 Msa0031200:CDS 50.0%
GTACCAGCCGATTGGAAAGA+AGG - chr1_1:57905506-57905525 None:intergenic 50.0%
!! AGGAAAAGGTACCAGCCGAT+TGG - chr1_1:57905514-57905533 None:intergenic 50.0%
AACTTTGGCCAGACACAACC+TGG + chr1_1:57905539-57905558 Msa0031200:CDS 50.0%
GGCTATTCCCCAGAGTTCTA+TGG + chr1_1:57905942-57905961 Msa0031200:CDS 50.0%
GTGGCGAGAAGTCAATAAGG+AGG - chr1_1:57906296-57906315 None:intergenic 50.0%
GAGGTGGCGAGAAGTCAATA+AGG - chr1_1:57906299-57906318 None:intergenic 50.0%
! AACGCCCTTGGATTTTCCCT+AGG - chr1_1:57906523-57906542 None:intergenic 50.0%
GGACAAATGATCAACGCCCT+TGG - chr1_1:57906535-57906554 None:intergenic 50.0%
!! GGCGTTGATCATTTGTCCCA+TGG + chr1_1:57906537-57906556 Msa0031200:CDS 50.0%
TCATTTGTCCCATGGAGCAG+TGG + chr1_1:57906545-57906564 Msa0031200:CDS 50.0%
GCTTTCTCAGAAGTCCTTCC+AGG - chr1_1:57906571-57906590 None:intergenic 50.0%
GGGATAAGCTCAAGAGAAGC+AGG + chr1_1:57907063-57907082 Msa0031200:intron 50.0%
CAGGTACCAAACCCAACGAT+AGG + chr1_1:57907082-57907101 Msa0031200:CDS 50.0%
! ACTCTCTTTTTCCTCCGAGG+TGG - chr1_1:57907109-57907128 None:intergenic 50.0%
GATGCATGCTTCGTAGGTAC+AGG - chr1_1:57907692-57907711 None:intergenic 50.0%
CCATTGGATGCATGCTTCGT+AGG - chr1_1:57907698-57907717 None:intergenic 50.0%
CCTACGAAGCATGCATCCAA+TGG + chr1_1:57907695-57907714 Msa0031200:CDS 50.0%
CACTAATGCCAAAGCTGCGA+CGG + chr1_1:57907825-57907844 Msa0031200:CDS 50.0%
TAATCAGACCGTCGCAGCTT+TGG - chr1_1:57907836-57907855 None:intergenic 50.0%
GCCGCCAATTCATGAATACG+AGG - chr1_1:57907869-57907888 None:intergenic 50.0%
GCTAAGGAAAGAGCTGAACC+AGG + chr1_1:57907887-57907906 Msa0031200:CDS 50.0%
GACTTTGTCGTTGGAAGGCA+AGG + chr1_1:57907929-57907948 Msa0031200:CDS 50.0%
GTCGTTGGAAGGCAAGGTTA+TGG + chr1_1:57907935-57907954 Msa0031200:CDS 50.0%
TTGGGTGTGACAGATGTACG+AGG + chr1_1:57907971-57907990 Msa0031200:CDS 50.0%
TGGGTGTGACAGATGTACGA+GGG + chr1_1:57907972-57907991 Msa0031200:CDS 50.0%
!! TTGAGGAGTGTTACCTCAGC+AGG - chr1_1:57908094-57908113 None:intergenic 50.0%
ACTGGGCAACAGTACACTGA+AGG + chr1_1:57908136-57908155 Msa0031200:CDS 50.0%
ACACTGAAGGACCGAGAATC+GGG + chr1_1:57908149-57908168 Msa0031200:CDS 50.0%
GATGCTCAAGAGAAAGGCTG+AGG + chr1_1:57908183-57908202 Msa0031200:CDS 50.0%
AAGAGAAAGGCTGAGGACCA+AGG + chr1_1:57908190-57908209 Msa0031200:CDS 50.0%
CCAGCTTGTAAACGCTGAAG+TGG - chr1_1:57908270-57908289 None:intergenic 50.0%
CCACTTCAGCGTTTACAAGC+TGG + chr1_1:57908267-57908286 Msa0031200:CDS 50.0%
! CATATCAACAAGGTTGGCCC+TGG - chr1_1:57908465-57908484 None:intergenic 50.0%
TAGTTACCGGGATCGAACCG+GGG + chr1_1:57901595-57901614 Msa0031200:intron 55.0%
! TTAAGTCCCCGGTTCGATCC+CGG - chr1_1:57901604-57901623 None:intergenic 55.0%
ACCAGCCGAGCTACCTATGT+GGG + chr1_1:57901655-57901674 Msa0031200:intron 55.0%
! ACGGATTGAGACGAGCCGAA+CGG - chr1_1:57901785-57901804 None:intergenic 55.0%
GGCTCGTCTCAATCCGTGTT+CGG + chr1_1:57901788-57901807 Msa0031200:CDS 55.0%
GCTCGTCTCAATCCGTGTTC+GGG + chr1_1:57901789-57901808 Msa0031200:CDS 55.0%
GTTGTTCTGCTGCCCGAACA+CGG - chr1_1:57901804-57901823 None:intergenic 55.0%
! CCCGTTTGCTGCGATCCAAA+TGG - chr1_1:57901872-57901891 None:intergenic 55.0%
CTGAGCTGCGCCAAATACAC+CGG - chr1_1:57901921-57901940 None:intergenic 55.0%
GGGGTGGAATATGAAGGTGG+GGG - chr1_1:57902851-57902870 None:intergenic 55.0%
GGGGGTGGAATATGAAGGTG+GGG - chr1_1:57902852-57902871 None:intergenic 55.0%
GGGAAGGGGGTGGAATATGA+AGG - chr1_1:57902857-57902876 None:intergenic 55.0%
TTCACATGGAGGTGGGGGAA+GGG - chr1_1:57902872-57902891 None:intergenic 55.0%
TTTCACATGGAGGTGGGGGA+AGG - chr1_1:57902873-57902892 None:intergenic 55.0%
GGTTGGGTGGCACTTCCAAA+TGG - chr1_1:57903230-57903249 None:intergenic 55.0%
! TGCTGGTTGTGATGGTTGGG+TGG - chr1_1:57903243-57903262 None:intergenic 55.0%
GTGCCTGTCGAACCAAATGC+TGG - chr1_1:57903329-57903348 None:intergenic 55.0%
TCGACAGGCACTCCTGCATT+TGG + chr1_1:57903338-57903357 Msa0031200:CDS 55.0%
GTGCTCGTAGCACCAAATGC+AGG - chr1_1:57903353-57903372 None:intergenic 55.0%
GCTACGAGCACTCCTGCATT+TGG + chr1_1:57903362-57903381 Msa0031200:CDS 55.0%
GTGCTCGTAGCACCAAATGC+AGG - chr1_1:57903353-57903372 None:intergenic 55.0%
TGCTGGGTGCACCAAAAGCA+GGG - chr1_1:57903424-57903443 None:intergenic 55.0%
TGCTGGGTGCACCAAAAGCA+GGG - chr1_1:57903424-57903443 None:intergenic 55.0%
! TGCTGGTTGCACCGAAAGCT+GGG - chr1_1:57903472-57903491 None:intergenic 55.0%
! CAACCAGCACCCCAGCTTTT+GGG + chr1_1:57903483-57903502 Msa0031200:CDS 55.0%
! AACCAGCACCCCAGCTTTTG+GGG + chr1_1:57903484-57903503 Msa0031200:CDS 55.0%
! TGCTGGTTGCCCCAAAAGCT+GGG - chr1_1:57903496-57903515 None:intergenic 55.0%
! TGAACCAAATGCAGGGGTGC+TGG - chr1_1:57903513-57903532 None:intergenic 55.0%
! GGTAACACAGGGGGTGCATT+TGG + chr1_1:57903551-57903570 Msa0031200:CDS 55.0%
!! ACCACTGTGTTTGGTGGTGG+TGG + chr1_1:57903584-57903603 Msa0031200:CDS 55.0%
!! CCACTGTGTTTGGTGGTGGT+GGG + chr1_1:57903585-57903604 Msa0031200:CDS 55.0%
!! CACTGTGTTTGGTGGTGGTG+GGG + chr1_1:57903586-57903605 Msa0031200:CDS 55.0%
!! ACTGTGTTTGGTGGTGGTGG+GGG + chr1_1:57903587-57903606 Msa0031200:CDS 55.0%
!! TTTGGTGGTGGTGGGGGATT+TGG + chr1_1:57903593-57903612 Msa0031200:CDS 55.0%
!! TTGGTGGTGGTGGGGGATTT+GGG + chr1_1:57903594-57903613 Msa0031200:CDS 55.0%
ACCAAAAGCAGGAGAGCTGG+AGG - chr1_1:57903669-57903688 None:intergenic 55.0%
AGCACCAAAAGCAGGAGAGC+TGG - chr1_1:57903672-57903691 None:intergenic 55.0%
!! TTTGGTGCTTCTAGTGCCCC+AGG + chr1_1:57903683-57903702 Msa0031200:CDS 55.0%
CTGACTAAAAGCCGGAGTGG+TGG - chr1_1:57903723-57903742 None:intergenic 55.0%
TTTGGCACCAGCAGCCCATT+TGG + chr1_1:57903755-57903774 Msa0031200:CDS 55.0%
TTGGCACCAGCAGCCCATTT+GGG + chr1_1:57903756-57903775 Msa0031200:CDS 55.0%
! GAAGCAGATAGTGGCACCTC+TGG + chr1_1:57904019-57904038 Msa0031200:CDS 55.0%
! AGATAGTGGCACCTCTGGAC+AGG + chr1_1:57904024-57904043 Msa0031200:CDS 55.0%
CAACTTTGCAGCCTGTCCAG+AGG - chr1_1:57904038-57904057 None:intergenic 55.0%
CTCTGGACAGGCTGCAAAGT+TGG + chr1_1:57904036-57904055 Msa0031200:CDS 55.0%
AACTGGCTGTGACGAGGAGT+TGG - chr1_1:57904486-57904505 None:intergenic 55.0%
AACTCCTCGTCACAGCCAGT+TGG + chr1_1:57904485-57904504 Msa0031200:CDS 55.0%
ACTCCTCGTCACAGCCAGTT+GGG + chr1_1:57904486-57904505 Msa0031200:CDS 55.0%
GCCCCTACAAATGCACAGTC+TGG + chr1_1:57904602-57904621 Msa0031200:CDS 55.0%
!! AGGATATGGCTTGGTGGAGG+CGG - chr1_1:57904951-57904970 None:intergenic 55.0%
! GCTGGTGCAAGTAGCTTTGC+TGG + chr1_1:57905666-57905685 Msa0031200:intron 55.0%
! GCATCAGCCTTTGGTGTGGT+TGG - chr1_1:57906490-57906509 None:intergenic 55.0%
!! AAGGGCATCAGCCTTTGGTG+TGG - chr1_1:57906494-57906513 None:intergenic 55.0%
GGTGGTCCTATCGTTGGGTT+TGG - chr1_1:57907091-57907110 None:intergenic 55.0%
ACCCAACGATAGGACCACCT+CGG + chr1_1:57907092-57907111 Msa0031200:CDS 55.0%
TCCGAGGTGGTCCTATCGTT+GGG - chr1_1:57907096-57907115 None:intergenic 55.0%
TTCAGCCCTTGTCCAACAGG+AGG - chr1_1:57908067-57908086 None:intergenic 55.0%
AGGGCTGAATAAGCCTGCTG+AGG + chr1_1:57908078-57908097 Msa0031200:CDS 55.0%
CACCAGCCGAGCTACCTATG+TGG + chr1_1:57901654-57901673 Msa0031200:intron 60.0%
TCCCACATAGGTAGCTCGGC+TGG - chr1_1:57901659-57901678 None:intergenic 60.0%
CGGATTGAGACGAGCCGAAC+GGG - chr1_1:57901784-57901803 None:intergenic 60.0%
AGCTGCGCCAAATACACCGG+TGG - chr1_1:57901918-57901937 None:intergenic 60.0%
TCACATGGAGGTGGGGGAAG+GGG - chr1_1:57902871-57902890 None:intergenic 60.0%
TGCTGGGTGCACCAAACGCA+GGG - chr1_1:57903400-57903419 None:intergenic 60.0%
!! GCACCAAAAGCAGGGGTGCT+GGG - chr1_1:57903416-57903435 None:intergenic 60.0%
! TGCACCAAAAGCAGGGGTGC+TGG - chr1_1:57903417-57903436 None:intergenic 60.0%
GCTGGGTGCACCAAAAGCAG+GGG - chr1_1:57903423-57903442 None:intergenic 60.0%
GTGCTGGGTGCACCAAAAGC+AGG - chr1_1:57903425-57903444 None:intergenic 60.0%
!! GCACCAAAAGCAGGGGTGCT+GGG - chr1_1:57903416-57903435 None:intergenic 60.0%
! TGCACCAAAAGCAGGGGTGC+TGG - chr1_1:57903417-57903436 None:intergenic 60.0%
GCTGGGTGCACCAAAAGCAG+GGG - chr1_1:57903423-57903442 None:intergenic 60.0%
GTGCTGGGTGCACCAAAAGC+AGG - chr1_1:57903425-57903444 None:intergenic 60.0%
GCTGGTTGCACCGAAAGCTG+GGG - chr1_1:57903471-57903490 None:intergenic 60.0%
!! GTGCTGGTTGCACCGAAAGC+TGG - chr1_1:57903473-57903492 None:intergenic 60.0%
! GCAACCAGCACCCCAGCTTT+TGG + chr1_1:57903482-57903501 Msa0031200:CDS 60.0%
GCTGGTTGCCCCAAAAGCTG+GGG - chr1_1:57903495-57903514 None:intergenic 60.0%
!! GTGCTGGTTGCCCCAAAAGC+TGG - chr1_1:57903497-57903516 None:intergenic 60.0%
GCAACCAGCACCCCTGCATT+TGG + chr1_1:57903506-57903525 Msa0031200:CDS 60.0%
CCCACCACCACCAAACACAG+TGG - chr1_1:57903588-57903607 None:intergenic 60.0%
!! TGGTGGTGGTGGGGGATTTG+GGG + chr1_1:57903595-57903614 Msa0031200:CDS 60.0%
! GCCTCCAGCTCTCCTGCTTT+TGG + chr1_1:57903665-57903684 Msa0031200:CDS 60.0%
!! CGTACTCCCAAATGGGCTGC+TGG - chr1_1:57903765-57903784 None:intergenic 60.0%
GGATTTGGAGGTCAACGGGG+TGG + chr1_1:57903965-57903984 Msa0031200:CDS 60.0%
CCTCCCATCTTAGCTCCTCG+TGG - chr1_1:57904099-57904118 None:intergenic 60.0%
CCACGAGGAGCTAAGATGGG+AGG + chr1_1:57904096-57904115 Msa0031200:CDS 60.0%
ACCAGTTGACGGAGGAGCAG+AGG - chr1_1:57904246-57904265 None:intergenic 60.0%
CCTGGCATACCAGTTGACGG+AGG - chr1_1:57904254-57904273 None:intergenic 60.0%
CCTCCGTCAACTGGTATGCC+AGG + chr1_1:57904251-57904270 Msa0031200:CDS 60.0%
ACACCCGCAACTGCTCCGTT+TGG + chr1_1:57904458-57904477 Msa0031200:CDS 60.0%
CACCCGCAACTGCTCCGTTT+GGG + chr1_1:57904459-57904478 Msa0031200:CDS 60.0%
ACCCGCAACTGCTCCGTTTG+GGG + chr1_1:57904460-57904479 Msa0031200:CDS 60.0%
GACGAGGAGTTGGCCCCAAA+CGG - chr1_1:57904476-57904495 None:intergenic 60.0%
TGACCCAACTGGCTGTGACG+AGG - chr1_1:57904492-57904511 None:intergenic 60.0%
CTTCCAGGCCACTGCTCCAT+GGG - chr1_1:57906556-57906575 None:intergenic 60.0%
CTCCGAGGTGGTCCTATCGT+TGG - chr1_1:57907097-57907116 None:intergenic 60.0%
CAACGATAGGACCACCTCGG+AGG + chr1_1:57907095-57907114 Msa0031200:CDS 60.0%
ACACTCAGTGGGCACAGAGC+TGG + chr1_1:57907761-57907780 Msa0031200:CDS 60.0%
GGGCAGTCATCGAGCCCGTT+CGG + chr1_1:57901767-57901786 Msa0031200:CDS 65.0%
CACATGGAGGTGGGGGAAGG+GGG - chr1_1:57902870-57902889 None:intergenic 65.0%
GCTACGAGCACCCCTGCGTT+TGG + chr1_1:57903386-57903405 Msa0031200:CDS 65.0%
GCTGGGTGCACCAAACGCAG+GGG - chr1_1:57903399-57903418 None:intergenic 65.0%
GTGCTGGGTGCACCAAACGC+AGG - chr1_1:57903401-57903420 None:intergenic 65.0%
! GCACCCAGCACCCCTGCTTT+TGG + chr1_1:57903410-57903429 Msa0031200:CDS 65.0%
! GCACCCAGCACCCCTGCTTT+TGG + chr1_1:57903410-57903429 Msa0031200:CDS 65.0%
GCACCCAGCACCCCAGCTTT+CGG + chr1_1:57903458-57903477 Msa0031200:CDS 65.0%
! GCACCGAAAGCTGGGGTGCT+GGG - chr1_1:57903464-57903483 None:intergenic 65.0%
TGCACCGAAAGCTGGGGTGC+TGG - chr1_1:57903465-57903484 None:intergenic 65.0%
TGCCCCAAAAGCTGGGGTGC+TGG - chr1_1:57903489-57903508 None:intergenic 65.0%
GAGCTGGAGGCCCCAAATGC+AGG - chr1_1:57903656-57903675 None:intergenic 65.0%
! GACGGAGGAGCAGAGGCATG+TGG - chr1_1:57904239-57904258 None:intergenic 65.0%
GCCTCTGCTCCTCCGTCAAC+TGG + chr1_1:57904242-57904261 Msa0031200:CDS 65.0%
GCCCCAAACGGAGCAGTTGC+GGG - chr1_1:57904464-57904483 None:intergenic 65.0%
GGCCCCAAACGGAGCAGTTG+CGG - chr1_1:57904465-57904484 None:intergenic 65.0%
TGTCCCATGGAGCAGTGGCC+TGG + chr1_1:57906550-57906569 Msa0031200:CDS 65.0%
CCTTCCAGGCCACTGCTCCA+TGG - chr1_1:57906557-57906576 None:intergenic 65.0%
CCATGGAGCAGTGGCCTGGA+AGG + chr1_1:57906554-57906573 Msa0031200:CDS 65.0%
CAGTGGGCACAGAGCTGGTG+AGG + chr1_1:57907766-57907785 Msa0031200:CDS 65.0%
ATGGAGGTGGGGGAAGGGGG+TGG - chr1_1:57902867-57902886 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 57901018 57908633 57901018 ID=Msa0031200;Name=Msa0031200
chr1_1 mRNA 57901018 57908633 57901018 ID=Msa0031200-mRNA-1;Parent=Msa0031200;Name=Msa0031200-mRNA-1;_AED=0.04;_eAED=0.04;_QI=219|1|0.92|1|0.91|0.84|13|309|1020
chr1_1 exon 57901018 57901193 57901018 ID=Msa0031200-mRNA-1:exon:17527;Parent=Msa0031200-mRNA-1
chr1_1 exon 57901391 57901452 57901391 ID=Msa0031200-mRNA-1:exon:17528;Parent=Msa0031200-mRNA-1
chr1_1 exon 57901762 57902064 57901762 ID=Msa0031200-mRNA-1:exon:17529;Parent=Msa0031200-mRNA-1
chr1_1 exon 57903162 57903818 57903162 ID=Msa0031200-mRNA-1:exon:17530;Parent=Msa0031200-mRNA-1
chr1_1 exon 57903915 57904139 57903915 ID=Msa0031200-mRNA-1:exon:17531;Parent=Msa0031200-mRNA-1
chr1_1 exon 57904231 57904766 57904231 ID=Msa0031200-mRNA-1:exon:17532;Parent=Msa0031200-mRNA-1
chr1_1 exon 57905473 57905560 57905473 ID=Msa0031200-mRNA-1:exon:17533;Parent=Msa0031200-mRNA-1
chr1_1 exon 57905667 57905733 57905667 ID=Msa0031200-mRNA-1:exon:17534;Parent=Msa0031200-mRNA-1
chr1_1 exon 57905942 57906080 57905942 ID=Msa0031200-mRNA-1:exon:17535;Parent=Msa0031200-mRNA-1
chr1_1 exon 57906262 57906372 57906262 ID=Msa0031200-mRNA-1:exon:17536;Parent=Msa0031200-mRNA-1
chr1_1 exon 57906457 57906631 57906457 ID=Msa0031200-mRNA-1:exon:17537;Parent=Msa0031200-mRNA-1
chr1_1 exon 57907064 57907126 57907064 ID=Msa0031200-mRNA-1:exon:17538;Parent=Msa0031200-mRNA-1
chr1_1 exon 57907645 57908633 57907645 ID=Msa0031200-mRNA-1:exon:17539;Parent=Msa0031200-mRNA-1
chr1_1 five_prime_UTR 57901018 57901193 57901018 ID=Msa0031200-mRNA-1:five_prime_utr;Parent=Msa0031200-mRNA-1
chr1_1 five_prime_UTR 57901391 57901433 57901391 ID=Msa0031200-mRNA-1:five_prime_utr;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57901434 57901452 57901434 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57901762 57902064 57901762 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57903162 57903818 57903162 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57903915 57904139 57903915 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57904231 57904766 57904231 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57905473 57905560 57905473 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57905667 57905733 57905667 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57905942 57906080 57905942 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57906262 57906372 57906262 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57906457 57906631 57906457 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57907064 57907126 57907064 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 CDS 57907645 57908324 57907645 ID=Msa0031200-mRNA-1:cds;Parent=Msa0031200-mRNA-1
chr1_1 three_prime_UTR 57908325 57908633 57908325 ID=Msa0031200-mRNA-1:three_prime_utr;Parent=Msa0031200-mRNA-1
Gene Sequence

>Msa0031200

ATGTTTGGTTCAACAAATCCTTTCGGGCAGTCATCGAGCCCGTTCGGCTCGTCTCAATCCGTGTTCGGGCAGCAGAACAACACAAATAACAATCCTTTTGCACCTAAGCCATTTGGGAGTCCAACTCCATTTGGATCGCAGCAAACGGGTAATTCCGTGTTTGGTGGTACTTCCACCGGTGTATTTGGCGCAGCTCAGCCATCGTCTCCGTTTTCTTCCAATACTTTCGGCGCTTCATCATCTCCAGCTTTTGGTACTTCAATGCCGGCATTTGGGGCATCTTCAACTCCGGCTTTTGGTAATTCGTCATCGTCATTTGGTGGATCATCAGTGTTTGGTCAGAAGCCTTCTTTTGGAGGTTTTGGCTCTACTCCTACTCAAACAAGTCCATTTGGAAGTGCCACCCAACCATCACAACCAGCATTTGGAAGTAACACCCAACAGTCGCAACCAGCATTTGGAAGCAGCATATTTGGTTCCTCAACACCAGCATTTGGTTCGACAGGCACTCCTGCATTTGGTGCTACGAGCACTCCTGCATTTGGTGCTACGAGCACCCCTGCGTTTGGTGCACCCAGCACCCCTGCTTTTGGTGCACCCAGCACCCCTGCTTTTGGTGCACCCAGCACCCCAGCTTTCGGTGCAACCAGCACCCCAGCTTTTGGGGCAACCAGCACCCCTGCATTTGGTTCAACTTCAACCTCAGCTTTTGGTAACACAGGGGGTGCATTTGGCATGTCAAATACCACTGTGTTTGGTGGTGGTGGGGGATTTGGGGCTTCAAGCAGTCCTGTATTTGGTTCATCAAGCACGCCTGCATTTGGGGCCTCCAGCTCTCCTGCTTTTGGTGCTTCTAGTGCCCCAGGTTTTAGTTTTGGTTCCACCACTCCGGCTTTTAGTCAGTCTAGTTCTGCATTTGGCACCAGCAGCCCATTTGGGAGTACGACCTCTAATTTTGGAGGTCAAAGTTCTGCATTTGGATCACAGACTCCCACTCAAGCATTTGGAAGTACTGGTATTGGGCAGTCAGGATTTGGAGGTCAACGGGGTGGAAGTAGAATAGCTAGTTACTCAGCTACAGTGGAAGCAGATAGTGGCACCTCTGGACAGGCTGCAAAGTTGGAGTCAATATCAGCCATGCCTGTTTACAAAGATAAAAGCCACGAGGAGCTAAGATGGGAGGACTATCAATTGGGAGATAAAGGTGGACCACATGCCTCTGCTCCTCCGTCAACTGGTATGCCAGGCTTTAATTCGTCTACGACACAGACAAATGTTTTTGGTCAATCACCAGCCAATCCTTTCTCTAGTAGCACAACACCTAATTCTAACCCATTTGCACAAAAGACATTTGGAACTTCAGCTCCTGCCTTCAGTTCACCAGCATTTCCTTCTTCATCATCATCAGCAGCAGCACCCTCTATTTTTGGAACACCCGCAACTGCTCCGTTTGGGGCCAACTCCTCGTCACAGCCAGTTGGGTCATCTACATCCCTGTTTGGTGGTCAAGGCACATCTTCCCAATTTAGTACAAACATTTTTGGCAACACCCAGCCAAGCCTATTTAACACTTCTGCCCCTACAAATGCACAGTCTGGTTTTGGTCAGAATACCTCCCAATTTGGGCAAACTGGTGCTTTTAATCAACCAAGCATGTTCAATCAACCTTCATCTGGAAGCCTTTTCTCAAGCAGCCCATCACTCACATCTAATGCTCCGACAGGTTTTGGACAAGCAGCGCCGTCCATGTCAACACCTTTCCAATCTACACCTTCTTTCCAATCGGCTGGTACCTTTTCCTTTAGCAACTTTGGCCAGACACAACCTGCTGGTGCAAGTAGCTTTGCTGGAGCTCAAACTCAAAGCATGTTTGGTCAGAATAATGTTGGACTTCAGGCTATTCCCCAGAGTTCTATGGTTGCACAAGCAGCACCCATTACAAACCCATTTGGAACACTTCCTGCTTTGCCTCAGATGTCAATTGGTCGAGTTGGAACCACTCCTTCCGTTCAATATGGTATCTCTAGCATGCCTGCCCAAGACAAACCTGCTACTGTAAGAATATCCTCCTTATTGACTTCTCGCCACCTCTCACAAAGAAGAGTCAAGTTTCCTATAAGGAAATACAAGAATGAGGGATCAAAGGTTCCATTCTTTAGTGATGATGAAGATACTCCAACCACACCAAAGGCTGATGCCCTTTTCATTCCTAGGGAAAATCCAAGGGCGTTGATCATTTGTCCCATGGAGCAGTGGCCTGGAAGGACTTCTGAGAAAGCATCCTCTTTTAAGGATAGATACACCTCCGTGAATGAGAATGGGATAAGCTCAAGAGAAGCAGGTACCAAACCCAACGATAGGACCACCTCGGAGGAAAAAGAGAGGACTGCAGCTGAAAATGGTGTTGTCAAGGAGCAAGTTCAGCAGCCTGTACCTACGAAGCATGCATCCAATGGGAATAACGAAGACCATTCTCTGCAAAAGGCGGATATGTACAAGACACTCAGTGGGCACAGAGCTGGTGAGGCTGCCATTGTGTATGAACATGGAGCTGATGTTGAGGCACTAATGCCAAAGCTGCGACGGTCTGATTACTACACACTGCCTCGTATTCATGAATTGGCGGCTAAGGAAAGAGCTGAACCAGGATTCTGCAGTCATGTCAAGGACTTTGTCGTTGGAAGGCAAGGTTATGGCAGCATCAGATTTTTGGGTGTGACAGATGTACGAGGGATTGATCTCGAGTCCATTGTTCAGTTTAACAATCGTGAGGTGATTGTATACATGGATGATTCAAAGAAACCTCCTGTTGGACAAGGGCTGAATAAGCCTGCTGAGGTAACACTCCTCAACATAAAATGTTTTGACAAAAAAACTGGGCAACAGTACACTGAAGGACCGAGAATCGGGAAATATAAAGAGATGCTCAAGAGAAAGGCTGAGGACCAAGGTGCTGAGTTTGTATCATATGATCCCAATAAAGGAGAATGGAAGTTCAGGGTCAACCACTTCAGCGTTTACAAGCTGGTAGATGAAGACAGTTGGATACAAGCTGATGTATAA
Protein sequence

>Msa0031200

MFGSTNPFGQSSSPFGSSQSVFGQQNNTNNNPFAPKPFGSPTPFGSQQTGNSVFGGTSTGVFGAAQPSSPFSSNTFGASSSPAFGTSMPAFGASSTPAFGNSSSSFGGSSVFGQKPSFGGFGSTPTQTSPFGSATQPSQPAFGSNTQQSQPAFGSSIFGSSTPAFGSTGTPAFGATSTPAFGATSTPAFGAPSTPAFGAPSTPAFGAPSTPAFGATSTPAFGATSTPAFGSTSTSAFGNTGGAFGMSNTTVFGGGGGFGASSSPVFGSSSTPAFGASSSPAFGASSAPGFSFGSTTPAFSQSSSAFGTSSPFGSTTSNFGGQSSAFGSQTPTQAFGSTGIGQSGFGGQRGGSRIASYSATVEADSGTSGQAAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPHASAPPSTGMPGFNSSTTQTNVFGQSPANPFSSSTTPNSNPFAQKTFGTSAPAFSSPAFPSSSSSAAAPSIFGTPATAPFGANSSSQPVGSSTSLFGGQGTSSQFSTNIFGNTQPSLFNTSAPTNAQSGFGQNTSQFGQTGAFNQPSMFNQPSSGSLFSSSPSLTSNAPTGFGQAAPSMSTPFQSTPSFQSAGTFSFSNFGQTQPAGASSFAGAQTQSMFGQNNVGLQAIPQSSMVAQAAPITNPFGTLPALPQMSIGRVGTTPSVQYGISSMPAQDKPATVRISSLLTSRHLSQRRVKFPIRKYKNEGSKVPFFSDDEDTPTTPKADALFIPRENPRALIICPMEQWPGRTSEKASSFKDRYTSVNENGISSREAGTKPNDRTTSEEKERTAAENGVVKEQVQQPVPTKHASNGNNEDHSLQKADMYKTLSGHRAGEAAIVYEHGADVEALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKDFVVGRQGYGSIRFLGVTDVRGIDLESIVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGQQYTEGPRIGKYKEMLKRKAEDQGAEFVSYDPNKGEWKFRVNHFSVYKLVDEDSWIQADV*