AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0031240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031240 MtrunA17_Chr1g0189171 94.887 1017 27 6 1 997 1 1012 0.0 1859
Msa0031240 MtrunA17_Chr1g0189201 57.767 618 165 21 6 586 9 567 4.40e-151 460
Msa0031240 MtrunA17_Chr1g0189181 59.091 198 50 5 293 484 32 204 2.68e-51 179
Msa0031240 MtrunA17_Chr1g0189181 49.751 201 73 7 2 194 34 214 7.35e-33 127
Msa0031240 MtrunA17_Chr1g0189181 88.235 34 4 0 600 633 1 34 2.25e-11 64.7
Msa0031240 MtrunA17_Chr5g0447931 48.052 154 72 3 830 982 37 183 2.89e-31 132
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031240 AT1G10390.3 56.494 1078 339 36 1 990 1 1036 0.0 946
Msa0031240 AT1G10390.1 56.494 1078 339 36 1 990 1 1036 0.0 946
Msa0031240 AT1G10390.2 56.494 1078 339 36 1 990 1 1036 0.0 946
Msa0031240 AT1G59660.1 50.798 1065 377 34 1 989 1 994 0.0 785
Msa0031240 AT1G59660.3 50.423 1065 374 34 1 989 1 987 0.0 776
Msa0031240 AT1G59660.2 50.423 1065 374 34 1 989 1 987 0.0 776
Msa0031240 AT1G80680.1 47.126 174 85 3 818 991 31 197 4.73e-37 151

Find 354 sgRNAs with CRISPR-Local

Find 624 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTAGGTTTCACTCTATT+TGG 0.115098 1_1:-57942096 Msa0031240:five_prime_UTR
TCATTCTTATATTTCCTTAT+AGG 0.139481 1_1:+57937151 None:intergenic
GGTCAGAATACCTCCCAATT+TGG 0.174042 1_1:-57938864 Msa0031240:CDS
TGAAAAGCTTACAGTGAAAT+TGG 0.174060 1_1:+57942325 None:intergenic
GAACTTCCATTCTCCTTTAT+TGG 0.188439 1_1:+57935256 None:intergenic
AAGCACCAGTTTGCCCAAAT+TGG 0.194534 1_1:+57938850 None:intergenic
GCATTTGGAAGCAGCATATT+TGG 0.195207 1_1:-57940200 Msa0031240:CDS
GCAACCAGCACCCCAGCTTT+TGG 0.199572 1_1:-57940011 Msa0031240:CDS
AACAATACATTTCATAGTTT+TGG 0.203770 1_1:-57935129 Msa0031240:three_prime_UTR
GCCTCCAGCTCTCCTGCTTT+TGG 0.214621 1_1:-57939828 Msa0031240:CDS
CATCAAGCACGCCTGCATTT+GGG 0.234663 1_1:-57939851 Msa0031240:CDS
GGGAGTACGACCTCTAATTT+TGG 0.244346 1_1:-57939717 Msa0031240:CDS
TCCTCTCCCATATTGTTATA+TGG 0.252327 1_1:+57935153 None:intergenic
GTGCTGGTTGCACCGAAAGC+TGG 0.262885 1_1:+57940023 None:intergenic
CACCCGCAACTGCTCCCTTT+GGG 0.266397 1_1:-57939034 Msa0031240:CDS
TGTGCAAATGGGTTAGAATT+AGG 0.267243 1_1:+57939146 None:intergenic
AACTTCCATTCTCCTTTATT+GGG 0.268732 1_1:+57935257 None:intergenic
GTGCTGGTTGCCCCAAAAGC+TGG 0.268797 1_1:+57939999 None:intergenic
GTACTTCAATGCCGGCATTT+GGG 0.272314 1_1:-57941497 Msa0031240:CDS
GCTTCAAGCAGTCCTGTATT+TGG 0.277522 1_1:-57939876 Msa0031240:CDS
TCTAATGCTCCGACAGGTTT+TGG 0.279078 1_1:-57938759 Msa0031240:CDS
TCATCAAGCACGCCTGCATT+TGG 0.282285 1_1:-57939852 Msa0031240:CDS
TTTGGTCAGAAGCCTTCTTT+TGG 0.286295 1_1:-57940320 Msa0031240:CDS
TGCTGGTTGCACCGAAAGCT+GGG 0.291903 1_1:+57940024 None:intergenic
TAGGGGCAGAAGTGTTAAAT+AGG 0.292855 1_1:+57938907 None:intergenic
TGCTGGTTGCCCCAAAAGCT+GGG 0.297700 1_1:+57940000 None:intergenic
GGTACTTCAATGCCGGCATT+TGG 0.303504 1_1:-57941498 Msa0031240:CDS
GGTATTGGGCAGTCAGGATT+TGG 0.303970 1_1:-57939543 Msa0031240:CDS
GCTTCATCATCTCCAGCTTT+TGG 0.308542 1_1:-57941519 Msa0031240:CDS
ACAAATGCACAGTCTGGTTT+TGG 0.309202 1_1:-57938885 Msa0031240:CDS
GCAACCAGCACCCCTGCATT+TGG 0.309240 1_1:-57939987 Msa0031240:CDS
GCACCCAGCACCCCTGCTTT+TGG 0.309345 1_1:-57940059 Msa0031240:CDS
GCACCCAGCACCCCTGCTTT+TGG 0.309345 1_1:-57940083 Msa0031240:CDS
ACACCCGCAACTGCTCCCTT+TGG 0.310487 1_1:-57939035 Msa0031240:CDS
ACATGTCCCATATAACAATA+TGG 0.312202 1_1:-57935160 Msa0031240:three_prime_UTR
ACCACTGTGTTTGGTGGTGG+TGG 0.317969 1_1:-57939909 Msa0031240:CDS
TGCACCGAAAGCTGGGGTGC+TGG 0.321739 1_1:+57940031 None:intergenic
TTAGGGACTGCAGCTGAAAA+TGG 0.325573 1_1:-57935851 Msa0031240:intron
GGCTCGTCTCAATCCGTGTT+CGG 0.334608 1_1:-57941705 Msa0031240:CDS
TCTTTATATTTCCCGATTCT+CGG 0.335353 1_1:+57935332 None:intergenic
CCATTTGCACAAAAGACATT+TGG 0.344011 1_1:-57939134 Msa0031240:CDS
ACCTCCCAATTTGGGCAAAC+TGG 0.346514 1_1:-57938855 Msa0031240:CDS
GCCCCAAAGGGAGCAGTTGC+GGG 0.346573 1_1:+57939032 None:intergenic
GTCAGAATACCTCCCAATTT+GGG 0.347524 1_1:-57938863 Msa0031240:CDS
TGGAAAGTTGTAAGCATGTT+TGG 0.348227 1_1:-57942076 Msa0031240:exon
GCTTTCTCAGAAGTCCTTCC+AGG 0.348991 1_1:+57936923 None:intergenic
TGCACCAAAAGCAGGGGTGC+TGG 0.350019 1_1:+57940055 None:intergenic
TGCACCAAAAGCAGGGGTGC+TGG 0.350019 1_1:+57940079 None:intergenic
AGTCAGTCTAGTTCTGCATT+TGG 0.351850 1_1:-57939756 Msa0031240:CDS
TCAACTTCAACCTCAGCTTT+TGG 0.352834 1_1:-57939963 Msa0031240:intron
GAAGAGTCAAGTTTCCTATA+AGG 0.352898 1_1:-57937165 Msa0031240:CDS
GACTATCAATTGGGAGATAA+AGG 0.353749 1_1:-57939375 Msa0031240:intron
GTCAGGATTTGGAGGTCAAC+GGG 0.354139 1_1:-57939532 Msa0031240:CDS
ACCACTCCTTCCGTTCAATA+TGG 0.354990 1_1:-57937449 Msa0031240:CDS
GCATCTTCAACTCCGGCTTT+TGG 0.355204 1_1:-57941474 Msa0031240:CDS
GCTGGTGCAAGTAGCTTTGC+TGG 0.355697 1_1:-57937829 Msa0031240:CDS
GAAAAGCTTACAGTGAAATT+GGG 0.358735 1_1:+57942326 None:intergenic
GGCTATTCCCCAGAGTTCTA+TGG 0.359916 1_1:-57937549 Msa0031240:CDS
GGATACAAGCTGATGTATAA+AGG 0.363721 1_1:-57935187 Msa0031240:exon
CCTCTCCCATATTGTTATAT+GGG 0.368578 1_1:+57935154 None:intergenic
TAGATCTGCGTGAAGAGATT+AGG 0.368962 1_1:+57942354 None:intergenic
GCACCCAGCACCCCAGCTTT+CGG 0.371736 1_1:-57940035 Msa0031240:CDS
TTTGGCACCAGCAGCCCATT+TGG 0.372926 1_1:-57939738 Msa0031240:CDS
CTCCGAGGTGGTCCTATCGT+TGG 0.377064 1_1:+57936398 None:intergenic
TCGACAGGCACTCCTGCATT+TGG 0.377919 1_1:-57940155 Msa0031240:intron
CAAATGCTGGTTGCGACTGT+TGG 0.378679 1_1:+57940216 None:intergenic
GTGCTGGGTGCACCAAAAGC+AGG 0.383968 1_1:+57940047 None:intergenic
GCATTTGGAAGTACTGGTAT+TGG 0.384090 1_1:-57939558 Msa0031240:CDS
ATAAAGGAGAATGGAAGTTC+AGG 0.385079 1_1:-57935253 Msa0031240:CDS
CTCTGGACAGGCTGCAAAGT+TGG 0.388026 1_1:-57939457 Msa0031240:CDS
AAATATATCCCAAAGCAAAA+AGG 0.388835 1_1:+57935020 None:intergenic
TTATTCAGCCCTTGTCCAAC+AGG 0.390186 1_1:+57935425 None:intergenic
TTTATAGGATCATCAGTGTT+TGG 0.391041 1_1:-57940338 Msa0031240:intron
GTGCTGGGTGCACCAAAAGC+AGG 0.391403 1_1:+57940071 None:intergenic
CAAACGGGTAATTCCGTGTT+TGG 0.392079 1_1:-57941609 Msa0031240:CDS
CATTTGGAAGTACTGGTATT+GGG 0.392197 1_1:-57939557 Msa0031240:CDS
TACAGTAGCAGGTTTGTCTT+GGG 0.396511 1_1:+57937228 None:intergenic
CACTGTGTTTGGTGGTGGTG+GGG 0.397049 1_1:-57939907 Msa0031240:CDS
GCTCGTCTCAATCCGTGTTC+GGG 0.397437 1_1:-57941704 Msa0031240:CDS
TTGGCACCAGCAGCCCATTT+GGG 0.397862 1_1:-57939737 Msa0031240:CDS
TTTGGGAGTCCAACTCCATT+TGG 0.398461 1_1:-57941639 Msa0031240:CDS
CAACCATCACAACCAGCATT+TGG 0.399302 1_1:-57940248 Msa0031240:CDS
CAACAGTCGCAACCAGCATT+TGG 0.399339 1_1:-57940215 Msa0031240:CDS
ACTTTGACCTCCAAAATTAG+AGG 0.401833 1_1:+57939707 None:intergenic
CCACTTCAGCGTTTACAATC+TGG 0.403092 1_1:-57935225 Msa0031240:CDS
GGTTCCTCAACACCAGCATT+TGG 0.403378 1_1:-57940179 Msa0031240:intron
GGTAATTCGTCATCGTCATT+TGG 0.404398 1_1:-57941453 Msa0031240:CDS
CAGACTCCCACTCAAGCATT+TGG 0.409112 1_1:-57939573 Msa0031240:CDS
CGGATTGAGACGAGCCGAAC+GGG 0.409832 1_1:+57941712 None:intergenic
AGCACCAGTTTGCCCAAATT+GGG 0.411313 1_1:+57938851 None:intergenic
TTACAGTAGCAGGTTTGTCT+TGG 0.411503 1_1:+57937227 None:intergenic
ATGTGCCTTGACCACCAAAC+AGG 0.411754 1_1:+57938973 None:intergenic
ACTGCCTCGTATTCATGAAT+TGG 0.411963 1_1:-57935630 Msa0031240:CDS
TAATCAGACCGTCGCAGCTT+TGG 0.412110 1_1:+57935659 None:intergenic
CCTACTCAAACAAGTCCATT+TGG 0.414331 1_1:-57940281 Msa0031240:CDS
AACTGGTGAAGTTTAGTGCC+AGG 0.414647 1_1:-57934939 Msa0031240:three_prime_UTR
AAGTGTTAAATAGGCTTGGC+TGG 0.416555 1_1:+57938916 None:intergenic
GCTTTGCCTCAGATGTCAAT+TGG 0.419405 1_1:-57937482 Msa0031240:CDS
ATTGCAGTTGGGGATTATCT+AGG 0.420769 1_1:-57942111 Msa0031240:intron
CAAATGCTGGTTGTGATGGT+TGG 0.422181 1_1:+57940249 None:intergenic
GCACCAAAAGCAGGGGTGCT+GGG 0.422344 1_1:+57940056 None:intergenic
GCACCAAAAGCAGGGGTGCT+GGG 0.422344 1_1:+57940080 None:intergenic
GCCTCTGCTCCTCCGTCAAC+TGG 0.423618 1_1:-57939251 Msa0031240:CDS
AGATCTGCGTGAAGAGATTA+GGG 0.425632 1_1:+57942355 None:intergenic
TGTCCCATGGAGCAGTGGCC+TGG 0.426491 1_1:-57936941 Msa0031240:CDS
CCACTGTGTTTGGTGGTGGT+GGG 0.427431 1_1:-57939908 Msa0031240:CDS
AACCAGACTGTGCATTTGTA+GGG 0.430698 1_1:+57938889 None:intergenic
TCCGAGGTGGTCCTATCGTT+GGG 0.431469 1_1:+57936399 None:intergenic
TACACTGAAGGACCGAGAAT+CGG 0.431501 1_1:-57935344 Msa0031240:CDS
GGTGGTCCTATCGTTGGGTT+TGG 0.431893 1_1:+57936404 None:intergenic
TGCCCCAAAAGCTGGGGTGC+TGG 0.432347 1_1:+57940007 None:intergenic
TTTGGTGCTTCTAGTGCCCC+AGG 0.432998 1_1:-57939810 Msa0031240:CDS
GCTACGAGCACTCCTGCATT+TGG 0.435030 1_1:-57940131 Msa0031240:CDS
GTTCCAAATGGGTTTGTAAT+GGG 0.435848 1_1:+57937512 None:intergenic
AAGATGGGAGGACTATCAAT+TGG 0.435890 1_1:-57939385 Msa0031240:CDS
GCACCGAAAGCTGGGGTGCT+GGG 0.436530 1_1:+57940032 None:intergenic
GCTACGAGCACCCCTGCGTT+TGG 0.438383 1_1:-57940107 Msa0031240:CDS
GCACCCATTACAAACCCATT+TGG 0.439385 1_1:-57937515 Msa0031240:CDS
GAGCTGGAGGCCCCAAATGC+AGG 0.441051 1_1:+57939840 None:intergenic
ACTGTGTTTGGTGGTGGTGG+GGG 0.444013 1_1:-57939906 Msa0031240:CDS
ATCTACACCTTCTTTCCAAT+CGG 0.446617 1_1:-57937999 Msa0031240:CDS
GTATCATATGATCCCAATAA+AGG 0.449462 1_1:-57935269 Msa0031240:CDS
CTTGTGCAACCATAGAACTC+TGG 0.449744 1_1:+57937540 None:intergenic
GCATCAGCCTTTGGTGTGGT+TGG 0.450225 1_1:+57937004 None:intergenic
AGCACCAAAAGCAGGAGAGC+TGG 0.451061 1_1:+57939824 None:intergenic
GGGTCATCTACATCCCTGTT+TGG 0.451560 1_1:-57938987 Msa0031240:CDS
ACCCGCAACTGCTCCCTTTG+GGG 0.452185 1_1:-57939033 Msa0031240:CDS
TGAACTAACCAGGTTGTGTC+TGG 0.452741 1_1:+57937948 None:intergenic
ATTTGGGGCATCTTCAACTC+CGG 0.452768 1_1:-57941481 Msa0031240:CDS
ATGAAAAGGGCATCAGCCTT+TGG 0.454264 1_1:+57936995 None:intergenic
AAACCAGACTGTGCATTTGT+AGG 0.456191 1_1:+57938888 None:intergenic
CCAAATGGCTTAGGTGCAAA+AGG 0.459149 1_1:+57941657 None:intergenic
GATACAAGCTGATGTATAAA+GGG 0.460606 1_1:-57935186 Msa0031240:exon
AAATGCTGGTTGTGATGGTT+GGG 0.460765 1_1:+57940250 None:intergenic
TTGAGGAGTGTTACCTCAGC+AGG 0.461242 1_1:+57935401 None:intergenic
TGCTGGGTGCACCAAACGCA+GGG 0.461264 1_1:+57940096 None:intergenic
ATGGTCTTCGTTATTCCCAT+TGG 0.461838 1_1:+57935781 None:intergenic
TCCATTTGGATCGCAGCAAA+CGG 0.462848 1_1:-57941625 Msa0031240:CDS
GCTCAAACTCAAAGCATGTT+TGG 0.463757 1_1:-57937805 Msa0031240:CDS
GGGCAGTCATCGAGCCCGTT+CGG 0.464084 1_1:-57941726 Msa0031240:CDS
CTTCCAGGCCACTGCTCCAT+GGG 0.464292 1_1:+57936938 None:intergenic
GGCCCCAAAGGGAGCAGTTG+CGG 0.465143 1_1:+57939031 None:intergenic
GAAGCAGATAGTGGCACCTC+TGG 0.465746 1_1:-57939474 Msa0031240:CDS
CTTCCAAATGCTGGTTGTGA+TGG 0.465773 1_1:+57940245 None:intergenic
GCCCCTACAAATGCACAGTC+TGG 0.468736 1_1:-57938891 Msa0031240:CDS
AGTACTGGTATTGGGCAGTC+AGG 0.469117 1_1:-57939549 Msa0031240:CDS
ACACTGAAGGACCGAGAATC+GGG 0.472233 1_1:-57935343 Msa0031240:CDS
CCCGTTTGCTGCGATCCAAA+TGG 0.472542 1_1:+57941624 None:intergenic
CCTTCCAGGCCACTGCTCCA+TGG 0.473071 1_1:+57936937 None:intergenic
TTAGAGGTCGTACTCCCAAA+TGG 0.473073 1_1:+57939723 None:intergenic
GAGGATATTCTTACAGTAGC+AGG 0.473971 1_1:+57937217 None:intergenic
TGATGAAGCGCCGAAAGTAT+TGG 0.475170 1_1:+57941533 None:intergenic
CGAAGACCATTCTCTGCAAA+AGG 0.475245 1_1:-57935768 Msa0031240:CDS
GCCAAAGTTGCTAAAGGAAA+AGG 0.480874 1_1:+57937970 None:intergenic
ATTGGAAAGAAGGTGTAGAT+TGG 0.481485 1_1:+57938002 None:intergenic
TACTTCAATGCCGGCATTTG+GGG 0.482872 1_1:-57941496 Msa0031240:CDS
GTGCTGGGTGCACCAAACGC+AGG 0.487611 1_1:+57940095 None:intergenic
TTGACATGACTGCAGAATCC+TGG 0.488318 1_1:+57935587 None:intergenic
ACTCAAGCATTTGGAAGTAC+TGG 0.489144 1_1:-57939564 Msa0031240:CDS
CCTCCGTCAACTGGTATGCC+AGG 0.491081 1_1:-57939242 Msa0031240:CDS
AAAGCAGGAAGTGTTCCAAA+TGG 0.491487 1_1:+57937500 None:intergenic
GACTTTGTCGTTGGAAGGCA+AGG 0.491709 1_1:-57935563 Msa0031240:CDS
GCCTCGTATTCATGAATTGG+CGG 0.491804 1_1:-57935627 Msa0031240:CDS
TGGGTGTTACTTCCAAATGC+TGG 0.491830 1_1:+57940236 None:intergenic
AAAGCCACGAGGAGCTAAGA+TGG 0.492465 1_1:-57939401 Msa0031240:CDS
ATGTTCAATCAACCTTCATC+TGG 0.492928 1_1:-57938813 Msa0031240:CDS
GTACCAGCCGATTGGAAAGA+AGG 0.493122 1_1:+57937992 None:intergenic
TGTTCCAAATGGGTTTGTAA+TGG 0.494999 1_1:+57937511 None:intergenic
ATGATCCCAATAAAGGAGAA+TGG 0.495773 1_1:-57935262 Msa0031240:CDS
GTCGTTGGAAGGCAAGGTTA+TGG 0.496990 1_1:-57935557 Msa0031240:CDS
TATTCATGAATTGGCGGCTA+AGG 0.497209 1_1:-57935621 Msa0031240:CDS
GTTGAAGATGCCCCAAATGC+CGG 0.498443 1_1:+57941486 None:intergenic
GGGATAAGCTCAAGAGAAGC+AGG 0.498506 1_1:-57936429 Msa0031240:CDS
GTTGGACTCCCAAATGGCTT+AGG 0.498646 1_1:+57941648 None:intergenic
TGCTGGGTGCACCAAAAGCA+GGG 0.498893 1_1:+57940048 None:intergenic
TGCTGGGTGCACCAAAAGCA+GGG 0.498893 1_1:+57940072 None:intergenic
ATCAAGCACGCCTGCATTTG+GGG 0.499047 1_1:-57939850 Msa0031240:CDS
TAAAGGAGAATGGAAGTTCA+GGG 0.500263 1_1:-57935252 Msa0031240:CDS
GACGAGGAGTTGGCCCCAAA+GGG 0.502254 1_1:+57939020 None:intergenic
GGCATTGAAGTACCAAAAGC+TGG 0.504883 1_1:+57941507 None:intergenic
GTGTTTGGTGGTACTTCCAC+CGG 0.505032 1_1:-57941594 Msa0031240:intron
AGATAGTGGCACCTCTGGAC+AGG 0.505057 1_1:-57939469 Msa0031240:CDS
GGTGTTGTGCTACTAGAGAA+AGG 0.505152 1_1:+57939167 None:intergenic
CCATGGAGCAGTGGCCTGGA+AGG 0.506677 1_1:-57936937 Msa0031240:CDS
CCATTTGGATCGCAGCAAAC+GGG 0.507092 1_1:-57941624 Msa0031240:CDS
ACTCCTCGTCACAGCCAGTT+GGG 0.507517 1_1:-57939007 Msa0031240:CDS
ATTGACATCTGAGGCAAAGC+AGG 0.507708 1_1:+57937485 None:intergenic
AAGCAGGAAGTGTTCCAAAT+GGG 0.508299 1_1:+57937501 None:intergenic
ACACCTTCTTTCCAATCGGC+TGG 0.509909 1_1:-57937995 Msa0031240:CDS
GACAGTACCATTCTCATTCA+CGG 0.510075 1_1:+57936874 None:intergenic
GAGAAAAGGCTTCCAGATGA+AGG 0.510564 1_1:+57938801 None:intergenic
AACTTTGGCCAGACACAACC+TGG 0.510599 1_1:-57937956 Msa0031240:intron
TTTATCTTTGTAAACAGGCA+TGG 0.510768 1_1:+57939422 None:intergenic
CGTACTCCCAAATGGGCTGC+TGG 0.511093 1_1:+57939731 None:intergenic
CATGTCCCATATAACAATAT+GGG 0.511531 1_1:-57935159 Msa0031240:three_prime_UTR
GGACAAATGATCAACGCCCT+TGG 0.512561 1_1:+57936959 None:intergenic
TATAAGGAAATATAAGAATG+AGG 0.513013 1_1:-57937149 Msa0031240:CDS
GATGATGAAGAAGGAAATGC+TGG 0.513464 1_1:+57939086 None:intergenic
ATGTCAAATACCACTGTGTT+TGG 0.514225 1_1:-57939918 Msa0031240:CDS
TAAAGAGATGCTCAAGAGAA+AGG 0.516587 1_1:-57935315 Msa0031240:CDS
TTGTGCAACCATAGAACTCT+GGG 0.518512 1_1:+57937541 None:intergenic
CAGATGTCAATTGGTCGAGT+TGG 0.518776 1_1:-57937473 Msa0031240:CDS
TCTTCATCATCACTAAAGAA+TGG 0.520226 1_1:+57937031 None:intergenic
AATATGCTGCTTCCAAATGC+TGG 0.520387 1_1:+57940203 None:intergenic
GAGCCAAAACCTCCAAAAGA+AGG 0.520720 1_1:+57940308 None:intergenic
GGCGTTGATCATTTGTCCCA+TGG 0.521200 1_1:-57936954 Msa0031240:CDS
GAAGGTTGATTGAACATGCT+TGG 0.522236 1_1:+57938819 None:intergenic
TGACGAGGAGTTGGCCCCAA+AGG 0.523615 1_1:+57939019 None:intergenic
CATGTCAAGGACTTTGTCGT+TGG 0.524179 1_1:-57935572 Msa0031240:CDS
GATGCATGCTTCGTAGGTAC+AGG 0.525211 1_1:+57935803 None:intergenic
TAGAGGTCGTACTCCCAAAT+GGG 0.525993 1_1:+57939724 None:intergenic
CCGAAAGTATTGGAAGAAAA+CGG 0.526469 1_1:+57941543 None:intergenic
TGGAACCAAAACTAAAACCT+GGG 0.526628 1_1:+57939793 None:intergenic
AATGGAGTTGGACTCCCAAA+TGG 0.527280 1_1:+57941642 None:intergenic
TGCTGCGATCCAAATGGAGT+TGG 0.528471 1_1:+57941630 None:intergenic
TCAAGGACTTTGTCGTTGGA+AGG 0.528854 1_1:-57935568 Msa0031240:CDS
AAATGCTGGTTGCGACTGTT+GGG 0.528915 1_1:+57940217 None:intergenic
CCAAATGGACTTGTTTGAGT+AGG 0.529453 1_1:+57940281 None:intergenic
GTCGTAGACGAATTAAAGCC+TGG 0.529750 1_1:+57939224 None:intergenic
CAGTGGGCACAGAGCTGGTG+AGG 0.530438 1_1:-57935726 Msa0031240:CDS
AAGAAACCTCCTGTTGGACA+AGG 0.532888 1_1:-57935434 Msa0031240:CDS
TGAACCAAATGCAGGGGTGC+TGG 0.532978 1_1:+57939983 None:intergenic
TCATTCCTAGGGAAAATCCA+AGG 0.533348 1_1:-57936976 Msa0031240:CDS
TGACTCTTCTTTGTGAGAGG+TGG 0.533352 1_1:+57937179 None:intergenic
GCTACAGTGGAAGCAGATAG+TGG 0.534008 1_1:-57939483 Msa0031240:CDS
GCAGAAGTGTTAAATAGGCT+TGG 0.534605 1_1:+57938912 None:intergenic
TCATCTACATCCCTGTTTGG+TGG 0.536524 1_1:-57938984 Msa0031240:intron
TACACCTCCGTGAATGAGAA+TGG 0.536980 1_1:-57936881 Msa0031240:intron
AGGAAAAGGTACCAGCCGAT+TGG 0.537215 1_1:+57937984 None:intergenic
CCATTGGATGCATGCTTCGT+AGG 0.537249 1_1:+57935797 None:intergenic
AACTCCTCGTCACAGCCAGT+TGG 0.537472 1_1:-57939008 Msa0031240:CDS
GTTGAAGTTGAACCAAATGC+AGG 0.538366 1_1:+57939975 None:intergenic
ATCTGGTAGATGAAGACAGT+TGG 0.539388 1_1:-57935208 Msa0031240:CDS
CTACGAAGCATGCATCCAAT+GGG 0.539644 1_1:-57935796 Msa0031240:CDS
AGTCAGGATTTGGAGGTCAA+CGG 0.542037 1_1:-57939533 Msa0031240:CDS
GGTTGGGTGGCACTTCCAAA+TGG 0.543213 1_1:+57940266 None:intergenic
ACTTGACTCTTCTTTGTGAG+AGG 0.547105 1_1:+57937176 None:intergenic
ACCAAAAGCAGGAGAGCTGG+AGG 0.547838 1_1:+57939827 None:intergenic
GTGATGGGCTGCTTGAGAAA+AGG 0.548542 1_1:+57938787 None:intergenic
CCAGATTGTAAACGCTGAAG+TGG 0.548636 1_1:+57935225 None:intergenic
CACTAATGCCAAAGCTGCGA+CGG 0.551023 1_1:-57935667 Msa0031240:CDS
AGATGGGAGGACTATCAATT+GGG 0.551615 1_1:-57939384 Msa0031240:CDS
GTGCTCGTAGCACCAAATGC+AGG 0.553367 1_1:+57940143 None:intergenic
ATATAAGAATGAGGGATCAA+AGG 0.554354 1_1:-57937140 Msa0031240:intron
GGTGTATCTATCCTTAAAAG+AGG 0.554469 1_1:+57936898 None:intergenic
GCTGGTTGCCCCAAAAGCTG+GGG 0.556557 1_1:+57940001 None:intergenic
GTGCTTGATGAACCAAATAC+AGG 0.557053 1_1:+57939864 None:intergenic
ACACTCAGTGGGCACAGAGC+TGG 0.558567 1_1:-57935731 Msa0031240:CDS
AACTGGCTGTGACGAGGAGT+TGG 0.560749 1_1:+57939010 None:intergenic
AATACCACTGTGTTTGGTGG+TGG 0.561037 1_1:-57939912 Msa0031240:CDS
GTGGAACCAAAACTAAAACC+TGG 0.562126 1_1:+57939792 None:intergenic
CCTACGAAGCATGCATCCAA+TGG 0.563785 1_1:-57935797 Msa0031240:CDS
TCATTTGTCCCATGGAGCAG+TGG 0.564174 1_1:-57936946 Msa0031240:CDS
AAGCCTGGCATACCAGTTGA+CGG 0.564463 1_1:+57939239 None:intergenic
GCACTAGAAGCACCAAAAGC+AGG 0.564969 1_1:+57939816 None:intergenic
AGGGATGTAGATGACCCAAC+TGG 0.566062 1_1:+57938993 None:intergenic
TGCTGGTTGTGATGGTTGGG+TGG 0.568361 1_1:+57940253 None:intergenic
GAGGTGGCGAGAAGTCAATA+AGG 0.568451 1_1:+57937195 None:intergenic
TCGTGAGGTGATTGTATACA+TGG 0.570815 1_1:-57935465 Msa0031240:CDS
ATAAGGAAATATAAGAATGA+GGG 0.572214 1_1:-57937148 Msa0031240:CDS
GTTGTTCTGCTGCCCGAACA+CGG 0.574376 1_1:+57941692 None:intergenic
TGTCTGGCCAAAGTTGCTAA+AGG 0.574424 1_1:+57937964 None:intergenic
AATTCGTCATCGTCATTTGG+TGG 0.574431 1_1:-57941450 Msa0031240:intron
CATTCCTAGGGAAAATCCAA+GGG 0.574460 1_1:-57936975 Msa0031240:CDS
AGGAAATGCTGGTGAACTGA+AGG 0.575618 1_1:+57939097 None:intergenic
ATGTTTGGTCAGAATAATGT+TGG 0.578136 1_1:-57937790 Msa0031240:CDS
TTCAGCCCTTGTCCAACAGG+AGG 0.580774 1_1:+57935428 None:intergenic
GAGATACCATATTGAACGGA+AGG 0.584307 1_1:+57937443 None:intergenic
GTGCTCGTAGCACCAAATGC+AGG 0.588399 1_1:+57940119 None:intergenic
AATGCTGGTGAACTGAAGGC+AGG 0.588493 1_1:+57939101 None:intergenic
CCCATATAACAATATGGGAG+AGG 0.588621 1_1:-57935154 Msa0031240:three_prime_UTR
GCTAAGGAAAGAGCTGAACC+AGG 0.589537 1_1:-57935605 Msa0031240:CDS
ACCAGTTGACGGAGGAGCAG+AGG 0.590749 1_1:+57939250 None:intergenic
GATGCTCAAGAGAAAGGCTG+AGG 0.590765 1_1:-57935309 Msa0031240:CDS
GATTCAAAGAAACCTCCTGT+TGG 0.591139 1_1:-57935440 Msa0031240:CDS
ACTGGTGAAGTTTAGTGCCA+GGG 0.591803 1_1:-57934938 Msa0031240:three_prime_UTR
ACGGGTAATTCCGTGTTTGG+TGG 0.591957 1_1:-57941606 Msa0031240:CDS
AAAAGCTTACAGTGAAATTG+GGG 0.592263 1_1:+57942327 None:intergenic
TTGAAGTTGAACCAAATGCA+GGG 0.592879 1_1:+57939976 None:intergenic
ATTGGGCAGTCAGGATTTGG+AGG 0.596861 1_1:-57939540 Msa0031240:CDS
ACCAGTTTGCCCAAATTGGG+AGG 0.598471 1_1:+57938854 None:intergenic
AGTGTTAAATAGGCTTGGCT+GGG 0.599695 1_1:+57938917 None:intergenic
ACCATATTGAACGGAAGGAG+TGG 0.600178 1_1:+57937448 None:intergenic
AGGATTCTGCAGTCATGTCA+AGG 0.601362 1_1:-57935585 Msa0031240:CDS
GAACTAGACTGACTAAAAGC+CGG 0.602042 1_1:+57939765 None:intergenic
GCTGCTGATGATGATGAAGA+AGG 0.605501 1_1:+57939077 None:intergenic
CTCACATCTAATGCTCCGAC+AGG 0.605827 1_1:-57938765 Msa0031240:CDS
GTGCCTGTCGAACCAAATGC+TGG 0.605979 1_1:+57940167 None:intergenic
AAGCCACGAGGAGCTAAGAT+GGG 0.606234 1_1:-57939400 Msa0031240:CDS
GCTGGGTGCACCAAAAGCAG+GGG 0.608639 1_1:+57940049 None:intergenic
GCTGGGTGCACCAAAAGCAG+GGG 0.608639 1_1:+57940073 None:intergenic
GGATTTGGAGGTCAACGGGG+TGG 0.608669 1_1:-57939528 Msa0031240:CDS
AGTACTTCCAAATGCTTGAG+TGG 0.609773 1_1:+57939566 None:intergenic
ACGATTGTTAAACTGAACAA+TGG 0.611463 1_1:+57935484 None:intergenic
CTGACTAAAAGCCGGAGTGG+TGG 0.612070 1_1:+57939773 None:intergenic
GGAGCATTAGATGTGAGTGA+TGG 0.612114 1_1:+57938771 None:intergenic
TCAAATACCACTGTGTTTGG+TGG 0.614427 1_1:-57939915 Msa0031240:CDS
GCTGGTTGCACCGAAAGCTG+GGG 0.615806 1_1:+57940025 None:intergenic
GAGCATTAGATGTGAGTGAT+GGG 0.617858 1_1:+57938772 None:intergenic
CCCTGTGTTACCAAAAGCTG+AGG 0.618001 1_1:+57939953 None:intergenic
ACGGATTGAGACGAGCCGAA+CGG 0.620717 1_1:+57941711 None:intergenic
GCTGGGTGCACCAAACGCAG+GGG 0.621019 1_1:+57940097 None:intergenic
AGCTAGTTACTCAGCTACAG+TGG 0.621042 1_1:-57939496 Msa0031240:CDS
AAGAGAAAGGCTGAGGACCA+AGG 0.622470 1_1:-57935302 Msa0031240:CDS
CAGGTACCAAACCCAACGAT+AGG 0.622891 1_1:-57936410 Msa0031240:CDS
TGTTCAGTTTAACAATCGTG+AGG 0.624585 1_1:-57935480 Msa0031240:CDS
ATGATACAAACTCAGCACCT+TGG 0.625305 1_1:+57935285 None:intergenic
GCTAGAGATACCATATTGAA+CGG 0.627623 1_1:+57937439 None:intergenic
AGCTGAAAATGGTGTTGTCA+AGG 0.628588 1_1:-57935840 Msa0031240:CDS
GTACTTCCAAATGCTTGAGT+GGG 0.631080 1_1:+57939567 None:intergenic
GGTGGAAGTACCACCAAACA+CGG 0.631934 1_1:+57941596 None:intergenic
TGTGCCTTGACCACCAAACA+GGG 0.632883 1_1:+57938974 None:intergenic
CAACTTTGCAGCCTGTCCAG+AGG 0.635625 1_1:+57939458 None:intergenic
CGAACCAAATGCTGGTGTTG+AGG 0.636106 1_1:+57940175 None:intergenic
AGACCATTCTCTGCAAAAGG+CGG 0.640474 1_1:-57935765 Msa0031240:CDS
ACTGGGCAACAGTACACTGA+AGG 0.642908 1_1:-57935356 Msa0031240:CDS
AGAAACCTCCTGTTGGACAA+GGG 0.643332 1_1:-57935433 Msa0031240:CDS
TTGGAAGAAAACGGAGACGA+TGG 0.644511 1_1:+57941552 None:intergenic
GCTGCCATTGTGTATGAACA+TGG 0.647605 1_1:-57935704 Msa0031240:CDS
AAAGAAGGTGTAGATTGGAA+AGG 0.648011 1_1:+57938007 None:intergenic
ACCAGACTGTGCATTTGTAG+GGG 0.649924 1_1:+57938890 None:intergenic
AGATACTCCAACCACACCAA+AGG 0.655834 1_1:-57937011 Msa0031240:CDS
AGGGCTGAATAAGCCTGCTG+AGG 0.658660 1_1:-57935414 Msa0031240:CDS
AGCTCCATGTTCATACACAA+TGG 0.660594 1_1:+57935700 None:intergenic
GACGGAGGAGCAGAGGCATG+TGG 0.661616 1_1:+57939257 None:intergenic
GATATGTACAAGACACTCAG+TGG 0.662232 1_1:-57935743 Msa0031240:CDS
TGACCCAACTGGCTGTGACG+AGG 0.664975 1_1:+57939004 None:intergenic
CTTCACCAGTTAAAAGACAA+CGG 0.666510 1_1:+57934951 None:intergenic
TGGGTGTGACAGATGTACGA+GGG 0.667447 1_1:-57935520 Msa0031240:CDS
ACTCGACCAATTGACATCTG+AGG 0.669172 1_1:+57937476 None:intergenic
GATGACGAATTACCAAAAGC+CGG 0.670748 1_1:+57941462 None:intergenic
GTGGCGAGAAGTCAATAAGG+AGG 0.671855 1_1:+57937198 None:intergenic
GCTGCTTGTCCAAAACCTGT+CGG 0.672305 1_1:+57938750 None:intergenic
TGTGCTACTAGAGAAAGGAT+TGG 0.673376 1_1:+57939172 None:intergenic
TGAAGTTGAACCAAATGCAG+GGG 0.674521 1_1:+57939977 None:intergenic
CCTCCCATCTTAGCTCCTCG+TGG 0.675080 1_1:+57939397 None:intergenic
ATATGTACAAGACACTCAGT+GGG 0.677051 1_1:-57935742 Msa0031240:CDS
AGACTGACTAAAAGCCGGAG+TGG 0.677239 1_1:+57939770 None:intergenic
CCACGAGGAGCTAAGATGGG+AGG 0.677956 1_1:-57939397 Msa0031240:CDS
AAGGGCATCAGCCTTTGGTG+TGG 0.679934 1_1:+57937000 None:intergenic
TCAGGATTTGGAGGTCAACG+GGG 0.688130 1_1:-57939531 Msa0031240:CDS
TTGGGTGTGACAGATGTACG+AGG 0.689369 1_1:-57935521 Msa0031240:CDS
AGATTGGAAAGGTGTTGACA+TGG 0.692451 1_1:+57938018 None:intergenic
TGGAAAGGTGTTGACATGGA+CGG 0.696227 1_1:+57938022 None:intergenic
TGAACATGGAGCTGATGTTG+AGG 0.697244 1_1:-57935690 Msa0031240:CDS
GGAACCAAAACTAAAACCTG+GGG 0.698294 1_1:+57939794 None:intergenic
ACCCAACGATAGGACCACCT+CGG 0.699651 1_1:-57936400 Msa0031240:CDS
GCCGCCAATTCATGAATACG+AGG 0.700929 1_1:+57935626 None:intergenic
CAACGATAGGACCACCTCGG+AGG 0.708362 1_1:-57936397 Msa0031240:CDS
CCCACCACCACCAAACACAG+TGG 0.732038 1_1:+57939908 None:intergenic
CCTGGCATACCAGTTGACGG+AGG 0.738091 1_1:+57939242 None:intergenic
TGTGCAACCATAGAACTCTG+GGG 0.762151 1_1:+57937542 None:intergenic
TTACAAAGATAAAAGCCACG+AGG 0.809043 1_1:-57939412 Msa0031240:CDS
AGTACCATTCTCATTCACGG+AGG 0.817913 1_1:+57936877 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTATTTATTGATTAATATA+TGG - chr1_1:57935615-57935634 Msa0031240:CDS 10.0%
!!! TGAGTTTTTATTATTTAAAT+CGG + chr1_1:57936033-57936052 None:intergenic 10.0%
!!! TAGTAATATTTTTCATTTAT+AGG + chr1_1:57938818-57938837 None:intergenic 10.0%
!!! AAATTATTATATACCTTTTT+TGG - chr1_1:57939665-57939684 Msa0031240:intron 10.0%
!!! AATTATTATATACCTTTTTT+GGG - chr1_1:57939666-57939685 Msa0031240:intron 10.0%
!!! TTTTTTTTTTTTTTTTTACC+TGG - chr1_1:57939793-57939812 Msa0031240:CDS 10.0%
!! ATAATTGAAAGAAAATGAAA+AGG + chr1_1:57935086-57935105 None:intergenic 15.0%
!! GGATAATAAAAAAATAGATT+AGG + chr1_1:57935359-57935378 None:intergenic 15.0%
!!! GAGTTTTTATTATTTAAATC+GGG + chr1_1:57936032-57936051 None:intergenic 15.0%
!! TTAAACTTATAAGTATTTGA+AGG - chr1_1:57936199-57936218 Msa0031240:intron 15.0%
!! TAAACTTATAAGTATTTGAA+GGG - chr1_1:57936200-57936219 Msa0031240:intron 15.0%
!! AAAAATGTTTGTACTAAATT+GGG + chr1_1:57938439-57938458 None:intergenic 15.0%
!! ATACAAGTAATTCAATTATT+AGG + chr1_1:57939164-57939183 None:intergenic 15.0%
!! AAAACATATTAGAAAATGAA+AGG + chr1_1:57939319-57939338 None:intergenic 15.0%
!!! ATTATTATATACCTTTTTTG+GGG - chr1_1:57939667-57939686 Msa0031240:intron 15.0%
!! ATAAAATGCTAAAATGTATA+GGG + chr1_1:57940758-57940777 None:intergenic 15.0%
!! AATAAAATGCTAAAATGTAT+AGG + chr1_1:57940759-57940778 None:intergenic 15.0%
!!! TAATATTTTTATTCATAGGA+TGG - chr1_1:57941035-57941054 Msa0031240:intron 15.0%
!! TGCATAATAGTATTAATTTA+GGG + chr1_1:57941275-57941294 None:intergenic 15.0%
!! ATGCATAATAGTATTAATTT+AGG + chr1_1:57941276-57941295 None:intergenic 15.0%
!!! TTTATATAGATTTTACAGTT+TGG - chr1_1:57942387-57942406 Msa0031240:five_prime_UTR 15.0%
!!! TTATATAGATTTTACAGTTT+GGG - chr1_1:57942388-57942407 Msa0031240:five_prime_UTR 15.0%
!! AAACAAAAAACTGCAAATTA+AGG + chr1_1:57935380-57935399 None:intergenic 20.0%
!!! TTTTAGGGTTGATTAATTAT+TGG - chr1_1:57935415-57935434 Msa0031240:CDS 20.0%
!! GTTGATTAATTATTGGATTA+TGG - chr1_1:57935422-57935441 Msa0031240:CDS 20.0%
!! TAGATAAATGTTAAAGTTAG+TGG - chr1_1:57935456-57935475 Msa0031240:CDS 20.0%
!!! GTATAAACAGAATCATATTT+TGG - chr1_1:57936087-57936106 Msa0031240:intron 20.0%
!!! TTGTGTAATTTTAAATTCGT+AGG + chr1_1:57936263-57936282 None:intergenic 20.0%
!! CATTATTAGATAATGAAAGA+AGG + chr1_1:57936923-57936942 None:intergenic 20.0%
!! CTTCTTTCATTATCTAATAA+TGG - chr1_1:57936921-57936940 Msa0031240:CDS 20.0%
!!! TTTTTCATATTTTCTTATGC+AGG - chr1_1:57937783-57937802 Msa0031240:intron 20.0%
!!! CATTGACTTAATTCAAATTT+AGG - chr1_1:57938099-57938118 Msa0031240:intron 20.0%
!! CAAAAATGTTTGTACTAAAT+TGG + chr1_1:57938440-57938459 None:intergenic 20.0%
!!! CAATTTAGTACAAACATTTT+TGG - chr1_1:57938438-57938457 Msa0031240:intron 20.0%
!! ATAATTGAATTACTTGTATG+TGG - chr1_1:57939165-57939184 Msa0031240:CDS 20.0%
!!! TATGATTTTGTGATTAAACT+TGG - chr1_1:57939193-57939212 Msa0031240:intron 20.0%
!!! TTAGTTCAATATTTTAGCTA+TGG - chr1_1:57939450-57939469 Msa0031240:CDS 20.0%
!!! TAGTTCAATATTTTAGCTAT+GGG - chr1_1:57939451-57939470 Msa0031240:CDS 20.0%
!!! ATTTTGTTGTATTAAATAGC+TGG - chr1_1:57939536-57939555 Msa0031240:CDS 20.0%
!!! GTTACAATTGTTTTATTTCT+TGG - chr1_1:57939626-57939645 Msa0031240:intron 20.0%
!!! TTGGATTCAATTATCTTTTT+TGG - chr1_1:57939724-57939743 Msa0031240:CDS 20.0%
!!! ATTCTGTTTATTTTTTAAGC+TGG - chr1_1:57940003-57940022 Msa0031240:CDS 20.0%
!! TCATTCTTATATTTCCTTAT+AGG + chr1_1:57940235-57940254 None:intergenic 20.0%
!! TATAAGGAAATATAAGAATG+AGG - chr1_1:57940234-57940253 Msa0031240:CDS 20.0%
!! ATAAGGAAATATAAGAATGA+GGG - chr1_1:57940235-57940254 Msa0031240:CDS 20.0%
!!! TAGTTTTTTTTGTTATGATG+AGG - chr1_1:57940276-57940295 Msa0031240:CDS 20.0%
!! AATACTGAAAAACAAATCTT+GGG + chr1_1:57940619-57940638 None:intergenic 20.0%
!!! CTAGATTTTATTCCTTTATT+AGG - chr1_1:57940655-57940674 Msa0031240:intron 20.0%
!! AAATAAGTTTATGGCAAAAT+AGG + chr1_1:57940812-57940831 None:intergenic 20.0%
!!! ATATCTTGAATGTAATTTTC+AGG - chr1_1:57940933-57940952 Msa0031240:intron 20.0%
!!! TATCTTGAATGTAATTTTCA+GGG - chr1_1:57940934-57940953 Msa0031240:intron 20.0%
!!! TGATCTATGTTAACAAATTT+TGG - chr1_1:57941069-57941088 Msa0031240:intron 20.0%
!! TTGATCAGTCATTTAAAAAT+TGG + chr1_1:57941443-57941462 None:intergenic 20.0%
!!! TAACTTCTGTAAATGATTTT+AGG - chr1_1:57941514-57941533 Msa0031240:CDS 20.0%
!!! AACTTCTGTAAATGATTTTA+GGG - chr1_1:57941515-57941534 Msa0031240:CDS 20.0%
!!! AAATGTTTTGACAAAAAAAC+TGG - chr1_1:57942009-57942028 Msa0031240:intron 20.0%
!!! AATGTTTTGACAAAAAAACT+GGG - chr1_1:57942010-57942029 Msa0031240:intron 20.0%
!!! AACAATACATTTCATAGTTT+TGG - chr1_1:57942254-57942273 Msa0031240:intron 20.0%
!!! TAAATTGTTTCTCTATTTTG+TGG - chr1_1:57942317-57942336 Msa0031240:intron 20.0%
! TATATCAAATTACGCAAGAA+CGG + chr1_1:57935241-57935260 None:intergenic 25.0%
! ATAATGACAACAACATAGAT+TGG + chr1_1:57935572-57935591 None:intergenic 25.0%
!!! GGAAATTTTTTAACAGCTTT+CGG - chr1_1:57935636-57935655 Msa0031240:CDS 25.0%
!!! GAAATTTTTTAACAGCTTTC+GGG - chr1_1:57935637-57935656 Msa0031240:CDS 25.0%
! TGAGCAAGACAATTAATAAA+TGG + chr1_1:57935996-57936015 None:intergenic 25.0%
! TTTATTAATTGTCTTGCTCA+TGG - chr1_1:57935996-57936015 Msa0031240:intron 25.0%
! TTTATACTCTTAATTGCTGA+GGG + chr1_1:57936074-57936093 None:intergenic 25.0%
!!! TAAACAGAATCATATTTTGG+TGG - chr1_1:57936090-57936109 Msa0031240:intron 25.0%
! ATACAATTCAACGATTAACA+GGG + chr1_1:57936132-57936151 None:intergenic 25.0%
! TATACAATTCAACGATTAAC+AGG + chr1_1:57936133-57936152 None:intergenic 25.0%
!! AGATTTTATGCAAAATCAAG+GGG + chr1_1:57936411-57936430 None:intergenic 25.0%
!! GAGATTTTATGCAAAATCAA+GGG + chr1_1:57936412-57936431 None:intergenic 25.0%
!!! TTTTGAAACCAGTTTATTGT+TGG - chr1_1:57936481-57936500 Msa0031240:intron 25.0%
!! ATCCAACTTTTCTCTTTTAT+AGG - chr1_1:57937030-57937049 Msa0031240:CDS 25.0%
! ATCCTATAAAAGAGAAAAGT+TGG + chr1_1:57937035-57937054 None:intergenic 25.0%
! AAATAATTCGATAATTCTGC+TGG - chr1_1:57938053-57938072 Msa0031240:intron 25.0%
! TGACTTAATTCAAATTTAGG+TGG - chr1_1:57938102-57938121 Msa0031240:intron 25.0%
! AAACTAACTGTGATCTTTAA+TGG + chr1_1:57938701-57938720 None:intergenic 25.0%
!!! ATCAATTCTCTTAATGGATT+AGG + chr1_1:57938961-57938980 None:intergenic 25.0%
! TGAAGAATCAATTCTCTTAA+TGG + chr1_1:57938967-57938986 None:intergenic 25.0%
! AAAGAAAGGAATCCTAAAAA+TGG + chr1_1:57939252-57939271 None:intergenic 25.0%
!!! TATAATGTCATTTTTGTGTG+TGG - chr1_1:57939749-57939768 Msa0031240:CDS 25.0%
!! AAACTATGATCAACCTTTTT+GGG - chr1_1:57940075-57940094 Msa0031240:CDS 25.0%
! GAATACTGAAAAACAAATCT+TGG + chr1_1:57940620-57940639 None:intergenic 25.0%
!!! TTTGACTTGTGTTTTGTAAT+TGG - chr1_1:57940782-57940801 Msa0031240:intron 25.0%
! CCTTATGTTTGTAAAAACTT+CGG - chr1_1:57940880-57940899 Msa0031240:intron 25.0%
!! TTGCAATTACATCTTAGTTT+TGG - chr1_1:57941129-57941148 Msa0031240:intron 25.0%
!!! TGCAATTACATCTTAGTTTT+GGG - chr1_1:57941130-57941149 Msa0031240:intron 25.0%
!! AAAACATAGTGAGCTTATTT+TGG + chr1_1:57941218-57941237 None:intergenic 25.0%
! AATGGAAATATTATCTGCTA+TGG - chr1_1:57941412-57941431 Msa0031240:intron 25.0%
!!! GAATAAAAGCACCAAAATAA+GGG + chr1_1:57941486-57941505 None:intergenic 25.0%
!! TGTCAAAACATTTTATGTTG+AGG + chr1_1:57942002-57942021 None:intergenic 25.0%
! AAATATATCCCAAAGCAAAA+AGG + chr1_1:57942366-57942385 None:intergenic 25.0%
AAAAGCTTACAGTGAAATTG+GGG + chr1_1:57935059-57935078 None:intergenic 30.0%
GAAAAGCTTACAGTGAAATT+GGG + chr1_1:57935060-57935079 None:intergenic 30.0%
TGAAAAGCTTACAGTGAAAT+TGG + chr1_1:57935061-57935080 None:intergenic 30.0%
GATTAATCCGTTATCATCTT+AGG - chr1_1:57935194-57935213 Msa0031240:CDS 30.0%
TATCTAGGTTTCACTCTATT+TGG - chr1_1:57935287-57935306 Msa0031240:CDS 30.0%
GTTTATACTCTTAATTGCTG+AGG + chr1_1:57936075-57936094 None:intergenic 30.0%
TACAATTCAACGATTAACAG+GGG + chr1_1:57936131-57936150 None:intergenic 30.0%
AGTATTTGAAGGGTGATTTA+AGG - chr1_1:57936210-57936229 Msa0031240:intron 30.0%
CAAGTACTTCAAGTGATTTA+AGG - chr1_1:57936280-57936299 Msa0031240:intron 30.0%
! CGAGATTTTATGCAAAATCA+AGG + chr1_1:57936413-57936432 None:intergenic 30.0%
!! AATCTCGATTTTAACGATCT+TGG - chr1_1:57936426-57936445 Msa0031240:CDS 30.0%
AATCAGTAGACTATCTTCAT+TGG - chr1_1:57936455-57936474 Msa0031240:intron 30.0%
TGACATAACCAACAATAAAC+TGG + chr1_1:57936492-57936511 None:intergenic 30.0%
! AATAACAGTTTTCATACACG+TGG - chr1_1:57936547-57936566 Msa0031240:intron 30.0%
ATTTCATGTGAATTTGTGTG+TGG - chr1_1:57936679-57936698 Msa0031240:intron 30.0%
TTTCATGTGAATTTGTGTGT+GGG - chr1_1:57936680-57936699 Msa0031240:intron 30.0%
TTGTTCTTAAGTGTTTCACA+TGG + chr1_1:57936776-57936795 None:intergenic 30.0%
ATCTCAGTTATGTAGTCTTT+AGG + chr1_1:57936877-57936896 None:intergenic 30.0%
! TGGTAATCATTAGCATCTTT+TGG - chr1_1:57936941-57936960 Msa0031240:CDS 30.0%
TTTATAGGATCATCAGTGTT+TGG - chr1_1:57937045-57937064 Msa0031240:intron 30.0%
TTTATCTTTGTAAACAGGCA+TGG + chr1_1:57937964-57937983 None:intergenic 30.0%
! TGGCTTTTATCTTTGTAAAC+AGG + chr1_1:57937969-57937988 None:intergenic 30.0%
!!! ATAATTCTGCTGGCTTTTAT+TGG - chr1_1:57938063-57938082 Msa0031240:intron 30.0%
! CAAATGTCTTTTGTGCAAAT+GGG + chr1_1:57938251-57938270 None:intergenic 30.0%
GTTTATGATCCAAGATAAGA+TGG - chr1_1:57938717-57938736 Msa0031240:intron 30.0%
TACTATAGAACAATGACAAC+TGG + chr1_1:57938791-57938810 None:intergenic 30.0%
TAAAGTAAAACCATCCTGTT+AGG - chr1_1:57938898-57938917 Msa0031240:CDS 30.0%
TTTATGTGTATTGCATTACC+TGG - chr1_1:57938990-57939009 Msa0031240:CDS 30.0%
TTATGTGTATTGCATTACCT+GGG - chr1_1:57938991-57939010 Msa0031240:CDS 30.0%
TTTCACCTTCTTTGAATTGT+TGG - chr1_1:57939103-57939122 Msa0031240:CDS 30.0%
TAACACCAACAATTCAAAGA+AGG + chr1_1:57939111-57939130 None:intergenic 30.0%
!! CTTTGAATTGTTGGTGTTAA+TGG - chr1_1:57939112-57939131 Msa0031240:CDS 30.0%
AATGGAAAAGTCAGCATAAA+CGG - chr1_1:57939130-57939149 Msa0031240:CDS 30.0%
GTATGATACACAGAAAAGAA+AGG + chr1_1:57939266-57939285 None:intergenic 30.0%
GCTAAAATATTGAACTAACC+AGG + chr1_1:57939448-57939467 None:intergenic 30.0%
ATGTTTGGTCAGAATAATGT+TGG - chr1_1:57939593-57939612 Msa0031240:intron 30.0%
! TGGATGTTTTATGTTTGACA+GGG - chr1_1:57939813-57939832 Msa0031240:CDS 30.0%
AATCAAGAAACATCACTTAC+AGG + chr1_1:57939973-57939992 None:intergenic 30.0%
! CAAACTATGATCAACCTTTT+TGG - chr1_1:57940074-57940093 Msa0031240:CDS 30.0%
AAATGTAAAACCACCCAAAA+AGG + chr1_1:57940091-57940110 None:intergenic 30.0%
ATATAAGAATGAGGGATCAA+AGG - chr1_1:57940243-57940262 Msa0031240:CDS 30.0%
TAATTACACTGTTCTCTTAC+AGG - chr1_1:57940327-57940346 Msa0031240:CDS 30.0%
TCTTCATCATCACTAAAGAA+TGG + chr1_1:57940355-57940374 None:intergenic 30.0%
! ATTTTCCCTAGGAATGAAAA+GGG + chr1_1:57940404-57940423 None:intergenic 30.0%
! CTGGTCTTTATACCTAATAA+AGG + chr1_1:57940670-57940689 None:intergenic 30.0%
! CCGAAGTTTTTACAAACATA+AGG + chr1_1:57940883-57940902 None:intergenic 30.0%
!!! GCAATTACATCTTAGTTTTG+GGG - chr1_1:57941131-57941150 Msa0031240:intron 30.0%
!! GGAATAAAAGCACCAAAATA+AGG + chr1_1:57941487-57941506 None:intergenic 30.0%
ATTTACAGAAGTTATGACAC+AGG + chr1_1:57941508-57941527 None:intergenic 30.0%
ACGATTGTTAAACTGAACAA+TGG + chr1_1:57941902-57941921 None:intergenic 30.0%
TCTTTATATTTCCCGATTCT+CGG + chr1_1:57942054-57942073 None:intergenic 30.0%
GTATCATATGATCCCAATAA+AGG - chr1_1:57942114-57942133 Msa0031240:intron 30.0%
AACTTCCATTCTCCTTTATT+GGG + chr1_1:57942129-57942148 None:intergenic 30.0%
GATACAAGCTGATGTATAAA+GGG - chr1_1:57942197-57942216 Msa0031240:intron 30.0%
ACATGTCCCATATAACAATA+TGG - chr1_1:57942223-57942242 Msa0031240:intron 30.0%
CATGTCCCATATAACAATAT+GGG - chr1_1:57942224-57942243 Msa0031240:intron 30.0%
! TTGATATGTCCTTTTTGCTT+TGG - chr1_1:57942354-57942373 Msa0031240:five_prime_UTR 30.0%
! TGATATGTCCTTTTTGCTTT+GGG - chr1_1:57942355-57942374 Msa0031240:five_prime_UTR 30.0%
! TATTTCCGTTGTCTTTTAAC+TGG - chr1_1:57942427-57942446 Msa0031240:five_prime_UTR 30.0%
AGCTAGACCTAAGATGATAA+CGG + chr1_1:57935204-57935223 None:intergenic 35.0%
! ATGTTGTTGTTGATTGCAGT+TGG - chr1_1:57935260-57935279 Msa0031240:CDS 35.0%
! TGTTGTTGTTGATTGCAGTT+GGG - chr1_1:57935261-57935280 Msa0031240:CDS 35.0%
TGGAAAGTTGTAAGCATGTT+TGG - chr1_1:57935307-57935326 Msa0031240:CDS 35.0%
TTAGTGGTTGTGTTAGTTAC+CGG - chr1_1:57935472-57935491 Msa0031240:CDS 35.0%
AGTTATAAGAGTTAAGTCCC+CGG + chr1_1:57935505-57935524 None:intergenic 35.0%
!! CCGAAAGTATTGGAAGAAAA+CGG + chr1_1:57935843-57935862 None:intergenic 35.0%
! CCGTTTTCTTCCAATACTTT+CGG - chr1_1:57935840-57935859 Msa0031240:CDS 35.0%
!!! CATATTTTGGTGGAAAAGAC+TGG - chr1_1:57936100-57936119 Msa0031240:intron 35.0%
GGGAAGTAAATCGTAAATCA+TGG + chr1_1:57936391-57936410 None:intergenic 35.0%
! GTGCTTAGTCAATGCTTTTA+TGG - chr1_1:57936580-57936599 Msa0031240:intron 35.0%
! CTTAGTCAATGCTTTTATGG+AGG - chr1_1:57936583-57936602 Msa0031240:intron 35.0%
GTGTCTATCTATCCTGTTTA+TGG - chr1_1:57936702-57936721 Msa0031240:intron 35.0%
AGGGAATCATATCCATAAAC+AGG + chr1_1:57936717-57936736 None:intergenic 35.0%
TTCTTAAGTGTTTCACATGG+AGG + chr1_1:57936773-57936792 None:intergenic 35.0%
TTGAAGTTGAACCAAATGCA+GGG + chr1_1:57937410-57937429 None:intergenic 35.0%
ATGTCAAATACCACTGTGTT+TGG - chr1_1:57937465-57937484 Msa0031240:CDS 35.0%
TGGAACCAAAACTAAAACCT+GGG + chr1_1:57937593-57937612 None:intergenic 35.0%
ACTTTGACCTCCAAAATTAG+AGG + chr1_1:57937679-57937698 None:intergenic 35.0%
!! CATTTGGAAGTACTGGTATT+GGG - chr1_1:57937826-57937845 Msa0031240:CDS 35.0%
TTACAAAGATAAAAGCCACG+AGG - chr1_1:57937971-57937990 Msa0031240:CDS 35.0%
GACTATCAATTGGGAGATAA+AGG - chr1_1:57938008-57938027 Msa0031240:CDS 35.0%
! ACGACACAGACAAATGTTTT+TGG - chr1_1:57938177-57938196 Msa0031240:intron 35.0%
!! TGTGCAAATGGGTTAGAATT+AGG + chr1_1:57938240-57938259 None:intergenic 35.0%
! CCAAATGTCTTTTGTGCAAA+TGG + chr1_1:57938252-57938271 None:intergenic 35.0%
CCATTTGCACAAAAGACATT+TGG - chr1_1:57938249-57938268 Msa0031240:intron 35.0%
ATGTTCAATCAACCTTCATC+TGG - chr1_1:57938570-57938589 Msa0031240:intron 35.0%
!! GTATTGACTCCATCTTATCT+TGG + chr1_1:57938729-57938748 None:intergenic 35.0%
!! TCTTAATGGATTAGGCTGTT+AGG + chr1_1:57938953-57938972 None:intergenic 35.0%
!! TCAGTACGTTGTCCATTTTT+AGG - chr1_1:57939237-57939256 Msa0031240:CDS 35.0%
AAATGAAAGGTAGTGCAAAC+TGG + chr1_1:57939306-57939325 None:intergenic 35.0%
! AAAGAAGGTGTAGATTGGAA+AGG + chr1_1:57939379-57939398 None:intergenic 35.0%
! ATTGGAAAGAAGGTGTAGAT+TGG + chr1_1:57939384-57939403 None:intergenic 35.0%
ATCTACACCTTCTTTCCAAT+CGG - chr1_1:57939384-57939403 Msa0031240:CDS 35.0%
! ACCTTTTCCTTTAGCAACTT+TGG - chr1_1:57939412-57939431 Msa0031240:CDS 35.0%
GTTGTTCATGCAATGATTGA+AGG - chr1_1:57939488-57939507 Msa0031240:CDS 35.0%
! TCATTTGGTAACCCCAAAAA+AGG + chr1_1:57939681-57939700 None:intergenic 35.0%
CTGTCAAACATAAAACATCC+AGG + chr1_1:57939814-57939833 None:intergenic 35.0%
! CTGGATGTTTTATGTTTGAC+AGG - chr1_1:57939812-57939831 Msa0031240:CDS 35.0%
GCTAGAGATACCATATTGAA+CGG + chr1_1:57939947-57939966 None:intergenic 35.0%
GAAGAGTCAAGTTTCCTATA+AGG - chr1_1:57940218-57940237 Msa0031240:CDS 35.0%
! GATTTTCCCTAGGAATGAAA+AGG + chr1_1:57940405-57940424 None:intergenic 35.0%
!!! TGAGAAAGCATCCTCTTTTA+AGG - chr1_1:57940474-57940493 Msa0031240:intron 35.0%
GGTGTATCTATCCTTAAAAG+AGG + chr1_1:57940488-57940507 None:intergenic 35.0%
! CTTACGTTTAGAATACAGCA+TGG - chr1_1:57940590-57940609 Msa0031240:intron 35.0%
TTAGGTATAAAGACCAGAGA+AGG - chr1_1:57940673-57940692 Msa0031240:intron 35.0%
ATTTGTGAGTATTCCTTCTC+TGG + chr1_1:57940689-57940708 None:intergenic 35.0%
GCTAATGTGACACTCAATAT+GGG + chr1_1:57941181-57941200 None:intergenic 35.0%
TGCTAATGTGACACTCAATA+TGG + chr1_1:57941182-57941201 None:intergenic 35.0%
TTGAGTGTCACATTAGCAAA+CGG - chr1_1:57941184-57941203 Msa0031240:intron 35.0%
CTAAAGTGACACTCAATATG+TGG - chr1_1:57941388-57941407 Msa0031240:intron 35.0%
ATATGTACAAGACACTCAGT+GGG - chr1_1:57941641-57941660 Msa0031240:CDS 35.0%
! TTATGGCAGCATCAGATTTT+TGG - chr1_1:57941843-57941862 Msa0031240:intron 35.0%
! TATGGCAGCATCAGATTTTT+GGG - chr1_1:57941844-57941863 Msa0031240:intron 35.0%
TGTTCAGTTTAACAATCGTG+AGG - chr1_1:57941903-57941922 Msa0031240:intron 35.0%
TAAAGAGATGCTCAAGAGAA+AGG - chr1_1:57942068-57942087 Msa0031240:exon 35.0%
ATGATCCCAATAAAGGAGAA+TGG - chr1_1:57942121-57942140 Msa0031240:intron 35.0%
GAACTTCCATTCTCCTTTAT+TGG + chr1_1:57942130-57942149 None:intergenic 35.0%
ATAAAGGAGAATGGAAGTTC+AGG - chr1_1:57942130-57942149 Msa0031240:intron 35.0%
TAAAGGAGAATGGAAGTTCA+GGG - chr1_1:57942131-57942150 Msa0031240:intron 35.0%
GGATACAAGCTGATGTATAA+AGG - chr1_1:57942196-57942215 Msa0031240:intron 35.0%
CCTCTCCCATATTGTTATAT+GGG + chr1_1:57942232-57942251 None:intergenic 35.0%
TCCTCTCCCATATTGTTATA+TGG + chr1_1:57942233-57942252 None:intergenic 35.0%
GCAAAAAGGACATATCAACA+AGG + chr1_1:57942352-57942371 None:intergenic 35.0%
CTTCACCAGTTAAAAGACAA+CGG + chr1_1:57942435-57942454 None:intergenic 35.0%
AGATCTGCGTGAAGAGATTA+GGG + chr1_1:57935031-57935050 None:intergenic 40.0%
TAGATCTGCGTGAAGAGATT+AGG + chr1_1:57935032-57935051 None:intergenic 40.0%
! GTTGTTGTTGATTGCAGTTG+GGG - chr1_1:57935262-57935281 Msa0031240:CDS 40.0%
ATTGCAGTTGGGGATTATCT+AGG - chr1_1:57935272-57935291 Msa0031240:CDS 40.0%
TAGTGGTTGTGTTAGTTACC+GGG - chr1_1:57935473-57935492 Msa0031240:CDS 40.0%
! AACATAGATTGGTCCCACAT+AGG + chr1_1:57935561-57935580 None:intergenic 40.0%
! CTTTTGCACCTAAGCCATTT+GGG - chr1_1:57935727-57935746 Msa0031240:CDS 40.0%
! AGCTTTTGGTACTTCAATGC+CGG - chr1_1:57935878-57935897 Msa0031240:intron 40.0%
GATGACGAATTACCAAAAGC+CGG + chr1_1:57935924-57935943 None:intergenic 40.0%
GGTAATTCGTCATCGTCATT+TGG - chr1_1:57935930-57935949 Msa0031240:intron 40.0%
AATTCGTCATCGTCATTTGG+TGG - chr1_1:57935933-57935952 Msa0031240:intron 40.0%
!! TTTGGTGGTAGGCTTTTCTA+TGG - chr1_1:57935948-57935967 Msa0031240:intron 40.0%
TAAGTGTTTCACATGGAGGT+GGG + chr1_1:57936769-57936788 None:intergenic 40.0%
TTAAGTGTTTCACATGGAGG+TGG + chr1_1:57936770-57936789 None:intergenic 40.0%
! TTTGGTCAGAAGCCTTCTTT+TGG - chr1_1:57937063-57937082 Msa0031240:intron 40.0%
!! AAGCCTTCTTTTGGAGGTTT+TGG - chr1_1:57937072-57937091 Msa0031240:intron 40.0%
! CCAAATGGACTTGTTTGAGT+AGG + chr1_1:57937105-57937124 None:intergenic 40.0%
CCTACTCAAACAAGTCCATT+TGG - chr1_1:57937102-57937121 Msa0031240:intron 40.0%
! AAATGCTGGTTGTGATGGTT+GGG + chr1_1:57937136-57937155 None:intergenic 40.0%
! AATATGCTGCTTCCAAATGC+TGG + chr1_1:57937183-57937202 None:intergenic 40.0%
GCATTTGGAAGCAGCATATT+TGG - chr1_1:57937183-57937202 Msa0031240:CDS 40.0%
TGAAGTTGAACCAAATGCAG+GGG + chr1_1:57937409-57937428 None:intergenic 40.0%
GTTGAAGTTGAACCAAATGC+AGG + chr1_1:57937411-57937430 None:intergenic 40.0%
! TCAACTTCAACCTCAGCTTT+TGG - chr1_1:57937420-57937439 Msa0031240:intron 40.0%
TCAAATACCACTGTGTTTGG+TGG - chr1_1:57937468-57937487 Msa0031240:CDS 40.0%
GTGCTTGATGAACCAAATAC+AGG + chr1_1:57937522-57937541 None:intergenic 40.0%
GGAACCAAAACTAAAACCTG+GGG + chr1_1:57937592-57937611 None:intergenic 40.0%
GTGGAACCAAAACTAAAACC+TGG + chr1_1:57937594-57937613 None:intergenic 40.0%
GAACTAGACTGACTAAAAGC+CGG + chr1_1:57937621-57937640 None:intergenic 40.0%
!! AGTCAGTCTAGTTCTGCATT+TGG - chr1_1:57937627-57937646 Msa0031240:intron 40.0%
! AGTACGACCTCTAATTTTGG+AGG - chr1_1:57937669-57937688 Msa0031240:intron 40.0%
GTACTTCCAAATGCTTGAGT+GGG + chr1_1:57937819-57937838 None:intergenic 40.0%
AGTACTTCCAAATGCTTGAG+TGG + chr1_1:57937820-57937839 None:intergenic 40.0%
! ACTCAAGCATTTGGAAGTAC+TGG - chr1_1:57937819-57937838 Msa0031240:CDS 40.0%
!! GCATTTGGAAGTACTGGTAT+TGG - chr1_1:57937825-57937844 Msa0031240:CDS 40.0%
AAGATGGGAGGACTATCAAT+TGG - chr1_1:57937998-57938017 Msa0031240:CDS 40.0%
AGATGGGAGGACTATCAATT+GGG - chr1_1:57937999-57938018 Msa0031240:CDS 40.0%
! TGTGCTACTAGAGAAAGGAT+TGG + chr1_1:57938214-57938233 None:intergenic 40.0%
GATGATGAAGAAGGAAATGC+TGG + chr1_1:57938300-57938319 None:intergenic 40.0%
AGTGTTAAATAGGCTTGGCT+GGG + chr1_1:57938469-57938488 None:intergenic 40.0%
AAGTGTTAAATAGGCTTGGC+TGG + chr1_1:57938470-57938489 None:intergenic 40.0%
!! GCAGAAGTGTTAAATAGGCT+TGG + chr1_1:57938474-57938493 None:intergenic 40.0%
!! TAGGGGCAGAAGTGTTAAAT+AGG + chr1_1:57938479-57938498 None:intergenic 40.0%
AACCAGACTGTGCATTTGTA+GGG + chr1_1:57938497-57938516 None:intergenic 40.0%
AAACCAGACTGTGCATTTGT+AGG + chr1_1:57938498-57938517 None:intergenic 40.0%
!! ACAAATGCACAGTCTGGTTT+TGG - chr1_1:57938498-57938517 Msa0031240:intron 40.0%
GTCAGAATACCTCCCAATTT+GGG - chr1_1:57938520-57938539 Msa0031240:intron 40.0%
! GAAGGTTGATTGAACATGCT+TGG + chr1_1:57938567-57938586 None:intergenic 40.0%
GAGCATTAGATGTGAGTGAT+GGG + chr1_1:57938614-57938633 None:intergenic 40.0%
AGTAAAACCATCCTGTTAGG+TGG - chr1_1:57938901-57938920 Msa0031240:CDS 40.0%
GAGGATGTCTCAACTTGATT+AGG - chr1_1:57939028-57939047 Msa0031240:CDS 40.0%
CACATATAGTTCTCTACACC+AGG + chr1_1:57939071-57939090 None:intergenic 40.0%
!! AGATTGGAAAGGTGTTGACA+TGG + chr1_1:57939368-57939387 None:intergenic 40.0%
GCCAAAGTTGCTAAAGGAAA+AGG + chr1_1:57939416-57939435 None:intergenic 40.0%
GCTCAAACTCAAAGCATGTT+TGG - chr1_1:57939578-57939597 Msa0031240:CDS 40.0%
CGAGAAAAGTCACTGTCATT+TGG + chr1_1:57939696-57939715 None:intergenic 40.0%
TTGTGCAACCATAGAACTCT+GGG + chr1_1:57939845-57939864 None:intergenic 40.0%
GAGATACCATATTGAACGGA+AGG + chr1_1:57939943-57939962 None:intergenic 40.0%
!! CTATGATCAACCTTTTTGGG+TGG - chr1_1:57940078-57940097 Msa0031240:CDS 40.0%
! TCAAACTGACCCTTCTTTTC+AGG - chr1_1:57940132-57940151 Msa0031240:CDS 40.0%
TACAGTAGCAGGTTTGTCTT+GGG + chr1_1:57940158-57940177 None:intergenic 40.0%
TTACAGTAGCAGGTTTGTCT+TGG + chr1_1:57940159-57940178 None:intergenic 40.0%
GAGGATATTCTTACAGTAGC+AGG + chr1_1:57940169-57940188 None:intergenic 40.0%
ACTTGACTCTTCTTTGTGAG+AGG + chr1_1:57940210-57940229 None:intergenic 40.0%
! TGATGCCCTTTTCATTCCTA+GGG - chr1_1:57940396-57940415 Msa0031240:intron 40.0%
TCATTCCTAGGGAAAATCCA+AGG - chr1_1:57940407-57940426 Msa0031240:intron 40.0%
CATTCCTAGGGAAAATCCAA+GGG - chr1_1:57940408-57940427 Msa0031240:intron 40.0%
GACAGTACCATTCTCATTCA+CGG + chr1_1:57940512-57940531 None:intergenic 40.0%
!! TGGACTGTTTTGTTGAACCT+TGG - chr1_1:57941089-57941108 Msa0031240:intron 40.0%
!! ACTGTTTTGTTGAACCTTGG+TGG - chr1_1:57941092-57941111 Msa0031240:intron 40.0%
ATGTGACACTCAATATGGGA+CGG + chr1_1:57941177-57941196 None:intergenic 40.0%
TGACACTCAATATGTGGCAA+TGG - chr1_1:57941394-57941413 Msa0031240:intron 40.0%
!! AGCTGAAAATGGTGTTGTCA+AGG - chr1_1:57941543-57941562 Msa0031240:CDS 40.0%
ATGGTCTTCGTTATTCCCAT+TGG + chr1_1:57941605-57941624 None:intergenic 40.0%
GATATGTACAAGACACTCAG+TGG - chr1_1:57941640-57941659 Msa0031240:CDS 40.0%
AGCTCCATGTTCATACACAA+TGG + chr1_1:57941686-57941705 None:intergenic 40.0%
ACTGCCTCGTATTCATGAAT+TGG - chr1_1:57941753-57941772 Msa0031240:intron 40.0%
TATTCATGAATTGGCGGCTA+AGG - chr1_1:57941762-57941781 Msa0031240:intron 40.0%
TCGTGAGGTGATTGTATACA+TGG - chr1_1:57941918-57941937 Msa0031240:intron 40.0%
GATTCAAAGAAACCTCCTGT+TGG - chr1_1:57941943-57941962 Msa0031240:intron 40.0%
ATGATACAAACTCAGCACCT+TGG + chr1_1:57942101-57942120 None:intergenic 40.0%
ATCTGGTAGATGAAGACAGT+TGG - chr1_1:57942175-57942194 Msa0031240:intron 40.0%
CCCATATAACAATATGGGAG+AGG - chr1_1:57942229-57942248 Msa0031240:intron 40.0%
! GAGACAGAAATTTTCATCCC+TGG + chr1_1:57942465-57942484 None:intergenic 40.0%
CCAAATGGCTTAGGTGCAAA+AGG + chr1_1:57935729-57935748 None:intergenic 45.0%
! CCTTTTGCACCTAAGCCATT+TGG - chr1_1:57935726-57935745 Msa0031240:CDS 45.0%
AATGGAGTTGGACTCCCAAA+TGG + chr1_1:57935744-57935763 None:intergenic 45.0%
TTTGGGAGTCCAACTCCATT+TGG - chr1_1:57935744-57935763 Msa0031240:CDS 45.0%
TCCATTTGGATCGCAGCAAA+CGG - chr1_1:57935758-57935777 Msa0031240:CDS 45.0%
CAAACGGGTAATTCCGTGTT+TGG - chr1_1:57935774-57935793 Msa0031240:CDS 45.0%
TTGGAAGAAAACGGAGACGA+TGG + chr1_1:57935834-57935853 None:intergenic 45.0%
!! TGATGAAGCGCCGAAAGTAT+TGG + chr1_1:57935853-57935872 None:intergenic 45.0%
! GCTTCATCATCTCCAGCTTT+TGG - chr1_1:57935864-57935883 Msa0031240:intron 45.0%
! GGCATTGAAGTACCAAAAGC+TGG + chr1_1:57935879-57935898 None:intergenic 45.0%
GTACTTCAATGCCGGCATTT+GGG - chr1_1:57935886-57935905 Msa0031240:intron 45.0%
TACTTCAATGCCGGCATTTG+GGG - chr1_1:57935887-57935906 Msa0031240:intron 45.0%
! ATTTGGGGCATCTTCAACTC+CGG - chr1_1:57935902-57935921 Msa0031240:intron 45.0%
AAGTGTTTCACATGGAGGTG+GGG + chr1_1:57936768-57936787 None:intergenic 45.0%
GAGCCAAAACCTCCAAAAGA+AGG + chr1_1:57937078-57937097 None:intergenic 45.0%
! CAAATGCTGGTTGTGATGGT+TGG + chr1_1:57937137-57937156 None:intergenic 45.0%
CAACCATCACAACCAGCATT+TGG - chr1_1:57937135-57937154 Msa0031240:intron 45.0%
! CTTCCAAATGCTGGTTGTGA+TGG + chr1_1:57937141-57937160 None:intergenic 45.0%
!! TGGGTGTTACTTCCAAATGC+TGG + chr1_1:57937150-57937169 None:intergenic 45.0%
! AAATGCTGGTTGCGACTGTT+GGG + chr1_1:57937169-57937188 None:intergenic 45.0%
!! ACCTCAGCTTTTGGTAACAC+AGG - chr1_1:57937429-57937448 Msa0031240:intron 45.0%
!! CCTCAGCTTTTGGTAACACA+GGG - chr1_1:57937430-57937449 Msa0031240:intron 45.0%
!! CTCAGCTTTTGGTAACACAG+GGG - chr1_1:57937431-57937450 Msa0031240:intron 45.0%
!! TCAGCTTTTGGTAACACAGG+GGG - chr1_1:57937432-57937451 Msa0031240:intron 45.0%
! AATACCACTGTGTTTGGTGG+TGG - chr1_1:57937471-57937490 Msa0031240:CDS 45.0%
GCTTCAAGCAGTCCTGTATT+TGG - chr1_1:57937507-57937526 Msa0031240:CDS 45.0%
!!! AGTGCCCCAGGTTTTAGTTT+TGG - chr1_1:57937585-57937604 Msa0031240:intron 45.0%
!!! TAGTTTTGGTTCCACCACTC+CGG - chr1_1:57937599-57937618 Msa0031240:intron 45.0%
TAGAGGTCGTACTCCCAAAT+GGG + chr1_1:57937662-57937681 None:intergenic 45.0%
TTAGAGGTCGTACTCCCAAA+TGG + chr1_1:57937663-57937682 None:intergenic 45.0%
!! GGGAGTACGACCTCTAATTT+TGG - chr1_1:57937666-57937685 Msa0031240:intron 45.0%
GGAGGTCAAAGTTCTGCATT+TGG - chr1_1:57937687-57937706 Msa0031240:intron 45.0%
AGTCAGGATTTGGAGGTCAA+CGG - chr1_1:57937850-57937869 Msa0031240:intron 45.0%
AGCTAGTTACTCAGCTACAG+TGG - chr1_1:57937887-57937906 Msa0031240:intron 45.0%
GTCGTAGACGAATTAAAGCC+TGG + chr1_1:57938162-57938181 None:intergenic 45.0%
! CTACTAGAGAAAGGATTGGC+TGG + chr1_1:57938210-57938229 None:intergenic 45.0%
! GGTGTTGTGCTACTAGAGAA+AGG + chr1_1:57938219-57938238 None:intergenic 45.0%
AGGAAATGCTGGTGAACTGA+AGG + chr1_1:57938289-57938308 None:intergenic 45.0%
! GCTGCTGATGATGATGAAGA+AGG + chr1_1:57938309-57938328 None:intergenic 45.0%
GCGGGTGTTCCAAAAATAGA+GGG + chr1_1:57938336-57938355 None:intergenic 45.0%
TGCGGGTGTTCCAAAAATAG+AGG + chr1_1:57938337-57938356 None:intergenic 45.0%
TCATCTACATCCCTGTTTGG+TGG - chr1_1:57938399-57938418 Msa0031240:intron 45.0%
ACCAGACTGTGCATTTGTAG+GGG + chr1_1:57938496-57938515 None:intergenic 45.0%
GGTCAGAATACCTCCCAATT+TGG - chr1_1:57938519-57938538 Msa0031240:intron 45.0%
AGCACCAGTTTGCCCAAATT+GGG + chr1_1:57938535-57938554 None:intergenic 45.0%
AAGCACCAGTTTGCCCAAAT+TGG + chr1_1:57938536-57938555 None:intergenic 45.0%
GAGAAAAGGCTTCCAGATGA+AGG + chr1_1:57938585-57938604 None:intergenic 45.0%
! GGAGCATTAGATGTGAGTGA+TGG + chr1_1:57938615-57938634 None:intergenic 45.0%
! TCTAATGCTCCGACAGGTTT+TGG - chr1_1:57938624-57938643 Msa0031240:intron 45.0%
AAGCCATATCCTGTTAGGCA+GGG - chr1_1:57938849-57938868 Msa0031240:CDS 45.0%
AAAACCATCCTGTTAGGTGG+TGG - chr1_1:57938904-57938923 Msa0031240:CDS 45.0%
TATACCACCACCTAACAGGA+TGG + chr1_1:57938911-57938930 None:intergenic 45.0%
GGTTTATACCACCACCTAAC+AGG + chr1_1:57938915-57938934 None:intergenic 45.0%
GTTAGGTATTCGCACTGAGA+TGG + chr1_1:57938936-57938955 None:intergenic 45.0%
! CTCATAACTGACGTTTTCCC+AGG + chr1_1:57939011-57939030 None:intergenic 45.0%
CTGGGAAAACGTCAGTTATG+AGG - chr1_1:57939009-57939028 Msa0031240:CDS 45.0%
GCTATCTAAACCTGTAGACC+TGG - chr1_1:57939050-57939069 Msa0031240:CDS 45.0%
!! AGTGCAAACTGGAGTTGGTA+TGG + chr1_1:57939295-57939314 None:intergenic 45.0%
AAGGTAGTGCAAACTGGAGT+TGG + chr1_1:57939300-57939319 None:intergenic 45.0%
!! TGGAAAGGTGTTGACATGGA+CGG + chr1_1:57939364-57939383 None:intergenic 45.0%
TGTCTGGCCAAAGTTGCTAA+AGG + chr1_1:57939422-57939441 None:intergenic 45.0%
TGAACTAACCAGGTTGTGTC+TGG + chr1_1:57939438-57939457 None:intergenic 45.0%
! GACTTTTCTCGTACTGTCGT+TGG - chr1_1:57939705-57939724 Msa0031240:intron 45.0%
TGTGCAACCATAGAACTCTG+GGG + chr1_1:57939844-57939863 None:intergenic 45.0%
CTTGTGCAACCATAGAACTC+TGG + chr1_1:57939846-57939865 None:intergenic 45.0%
GCACCCATTACAAACCCATT+TGG - chr1_1:57939868-57939887 Msa0031240:CDS 45.0%
! ATTGACATCTGAGGCAAAGC+AGG + chr1_1:57939901-57939920 None:intergenic 45.0%
GCTTTGCCTCAGATGTCAAT+TGG - chr1_1:57939901-57939920 Msa0031240:CDS 45.0%
ACTCGACCAATTGACATCTG+AGG + chr1_1:57939910-57939929 None:intergenic 45.0%
CAGATGTCAATTGGTCGAGT+TGG - chr1_1:57939910-57939929 Msa0031240:CDS 45.0%
ACCACTCCTTCCGTTCAATA+TGG - chr1_1:57939934-57939953 Msa0031240:CDS 45.0%
ACCATATTGAACGGAAGGAG+TGG + chr1_1:57939938-57939957 None:intergenic 45.0%
TGTCTTGGGCCTGAAAAGAA+GGG + chr1_1:57940144-57940163 None:intergenic 45.0%
TTGTCTTGGGCCTGAAAAGA+AGG + chr1_1:57940145-57940164 None:intergenic 45.0%
TGACTCTTCTTTGTGAGAGG+TGG + chr1_1:57940207-57940226 None:intergenic 45.0%
AGATACTCCAACCACACCAA+AGG - chr1_1:57940372-57940391 Msa0031240:intron 45.0%
!! ATGAAAAGGGCATCAGCCTT+TGG + chr1_1:57940391-57940410 None:intergenic 45.0%
! CTGATGCCCTTTTCATTCCT+AGG - chr1_1:57940395-57940414 Msa0031240:intron 45.0%
TACACCTCCGTGAATGAGAA+TGG - chr1_1:57940502-57940521 Msa0031240:intron 45.0%
AGTACCATTCTCATTCACGG+AGG + chr1_1:57940509-57940528 None:intergenic 45.0%
! CATACTCTCTTTTTCCTCCG+AGG + chr1_1:57941003-57941022 None:intergenic 45.0%
CAAATGAAGCACAACCACCA+AGG + chr1_1:57941109-57941128 None:intergenic 45.0%
CCAAAATAAGGGACTGATGG+AGG + chr1_1:57941475-57941494 None:intergenic 45.0%
!! CCTCCATCAGTCCCTTATTT+TGG - chr1_1:57941472-57941491 Msa0031240:CDS 45.0%
GCACCAAAATAAGGGACTGA+TGG + chr1_1:57941478-57941497 None:intergenic 45.0%
TTAGGGACTGCAGCTGAAAA+TGG - chr1_1:57941532-57941551 Msa0031240:CDS 45.0%
CTACGAAGCATGCATCCAAT+GGG - chr1_1:57941587-57941606 Msa0031240:intron 45.0%
CGAAGACCATTCTCTGCAAA+AGG - chr1_1:57941615-57941634 Msa0031240:CDS 45.0%
AGACCATTCTCTGCAAAAGG+CGG - chr1_1:57941618-57941637 Msa0031240:CDS 45.0%
! TATCCGCCTTTTGCAGAGAA+TGG + chr1_1:57941624-57941643 None:intergenic 45.0%
GCTGCCATTGTGTATGAACA+TGG - chr1_1:57941679-57941698 Msa0031240:CDS 45.0%
TGAACATGGAGCTGATGTTG+AGG - chr1_1:57941693-57941712 Msa0031240:CDS 45.0%
GCCTCGTATTCATGAATTGG+CGG - chr1_1:57941756-57941775 Msa0031240:intron 45.0%
TTGACATGACTGCAGAATCC+TGG + chr1_1:57941799-57941818 None:intergenic 45.0%
AGGATTCTGCAGTCATGTCA+AGG - chr1_1:57941798-57941817 Msa0031240:intron 45.0%
CATGTCAAGGACTTTGTCGT+TGG - chr1_1:57941811-57941830 Msa0031240:intron 45.0%
TCAAGGACTTTGTCGTTGGA+AGG - chr1_1:57941815-57941834 Msa0031240:intron 45.0%
AAGAAACCTCCTGTTGGACA+AGG - chr1_1:57941949-57941968 Msa0031240:intron 45.0%
AGAAACCTCCTGTTGGACAA+GGG - chr1_1:57941950-57941969 Msa0031240:intron 45.0%
TTATTCAGCCCTTGTCCAAC+AGG + chr1_1:57941961-57941980 None:intergenic 45.0%
TACACTGAAGGACCGAGAAT+CGG - chr1_1:57942039-57942058 Msa0031240:intron 45.0%
CCAGATTGTAAACGCTGAAG+TGG + chr1_1:57942161-57942180 None:intergenic 45.0%
CCACTTCAGCGTTTACAATC+TGG - chr1_1:57942158-57942177 Msa0031240:intron 45.0%
AACTGGTGAAGTTTAGTGCC+AGG - chr1_1:57942444-57942463 Msa0031240:five_prime_UTR 45.0%
ACTGGTGAAGTTTAGTGCCA+GGG - chr1_1:57942445-57942464 Msa0031240:five_prime_UTR 45.0%
!!! TCATTATTATTATTATTTTT+AGG - chr1_1:57935399-57935418 Msa0031240:CDS 5.0%
!!! CATTATTATTATTATTTTTA+GGG - chr1_1:57935400-57935419 Msa0031240:CDS 5.0%
!! ATAATATAAAAACAATAAAA+AGG + chr1_1:57936979-57936998 None:intergenic 5.0%
!! AAAAAAAAAAAACATTTAAT+TGG + chr1_1:57939785-57939804 None:intergenic 5.0%
!! AAATTAAAAAAATAAGTTTA+TGG + chr1_1:57940821-57940840 None:intergenic 5.0%
!!! TTATTAATATTTTTATTCAT+AGG - chr1_1:57941031-57941050 Msa0031240:intron 5.0%
GTTAGTTACCGGGATCGAAC+CGG - chr1_1:57935483-57935502 Msa0031240:CDS 50.0%
TTAGTTACCGGGATCGAACC+GGG - chr1_1:57935484-57935503 Msa0031240:CDS 50.0%
TTGGTCCCACATAGGTAGCT+CGG + chr1_1:57935553-57935572 None:intergenic 50.0%
GTTGGACTCCCAAATGGCTT+AGG + chr1_1:57935738-57935757 None:intergenic 50.0%
TGCTGCGATCCAAATGGAGT+TGG + chr1_1:57935756-57935775 None:intergenic 50.0%
CCATTTGGATCGCAGCAAAC+GGG - chr1_1:57935759-57935778 Msa0031240:CDS 50.0%
ACGGGTAATTCCGTGTTTGG+TGG - chr1_1:57935777-57935796 Msa0031240:CDS 50.0%
!! GGTGGAAGTACCACCAAACA+CGG + chr1_1:57935790-57935809 None:intergenic 50.0%
! GTGTTTGGTGGTACTTCCAC+CGG - chr1_1:57935789-57935808 Msa0031240:CDS 50.0%
GGTACTTCCACCGGTGTATT+TGG - chr1_1:57935798-57935817 Msa0031240:CDS 50.0%
GGTACTTCAATGCCGGCATT+TGG - chr1_1:57935885-57935904 Msa0031240:intron 50.0%
GTTGAAGATGCCCCAAATGC+CGG + chr1_1:57935900-57935919 None:intergenic 50.0%
! GCATCTTCAACTCCGGCTTT+TGG - chr1_1:57935909-57935928 Msa0031240:intron 50.0%
! CGTCATCGTCATTTGGTGGT+AGG - chr1_1:57935937-57935956 Msa0031240:intron 50.0%
GGAATATGAAGGTGGGGGAA+GGG + chr1_1:57936736-57936755 None:intergenic 50.0%
TGGAATATGAAGGTGGGGGA+AGG + chr1_1:57936737-57936756 None:intergenic 50.0%
AGGGGGTGGAATATGAAGGT+GGG + chr1_1:57936743-57936762 None:intergenic 50.0%
AAGGGGGTGGAATATGAAGG+TGG + chr1_1:57936744-57936763 None:intergenic 50.0%
AGTGTTTCACATGGAGGTGG+GGG + chr1_1:57936767-57936786 None:intergenic 50.0%
! GGTCAGAAGCCTTCTTTTGG+AGG - chr1_1:57937066-57937085 Msa0031240:intron 50.0%
! CAAATGCTGGTTGCGACTGT+TGG + chr1_1:57937170-57937189 None:intergenic 50.0%
CAACAGTCGCAACCAGCATT+TGG - chr1_1:57937168-57937187 Msa0031240:CDS 50.0%
GGTTCCTCAACACCAGCATT+TGG - chr1_1:57937204-57937223 Msa0031240:CDS 50.0%
! CGAACCAAATGCTGGTGTTG+AGG + chr1_1:57937211-57937230 None:intergenic 50.0%
! ACACCAGCATTTGGTTCGAC+AGG - chr1_1:57937213-57937232 Msa0031240:CDS 50.0%
CCCTGTGTTACCAAAAGCTG+AGG + chr1_1:57937433-57937452 None:intergenic 50.0%
TCATCAAGCACGCCTGCATT+TGG - chr1_1:57937531-57937550 Msa0031240:CDS 50.0%
CATCAAGCACGCCTGCATTT+GGG - chr1_1:57937532-57937551 Msa0031240:CDS 50.0%
ATCAAGCACGCCTGCATTTG+GGG - chr1_1:57937533-57937552 Msa0031240:CDS 50.0%
!! GCACTAGAAGCACCAAAAGC+AGG + chr1_1:57937570-57937589 None:intergenic 50.0%
AGACTGACTAAAAGCCGGAG+TGG + chr1_1:57937616-57937635 None:intergenic 50.0%
CAGACTCCCACTCAAGCATT+TGG - chr1_1:57937810-57937829 Msa0031240:CDS 50.0%
!! AGTACTGGTATTGGGCAGTC+AGG - chr1_1:57937834-57937853 Msa0031240:intron 50.0%
! GGTATTGGGCAGTCAGGATT+TGG - chr1_1:57937840-57937859 Msa0031240:intron 50.0%
ATTGGGCAGTCAGGATTTGG+AGG - chr1_1:57937843-57937862 Msa0031240:intron 50.0%
GTCAGGATTTGGAGGTCAAC+GGG - chr1_1:57937851-57937870 Msa0031240:intron 50.0%
TCAGGATTTGGAGGTCAACG+GGG - chr1_1:57937852-57937871 Msa0031240:intron 50.0%
GCTACAGTGGAAGCAGATAG+TGG - chr1_1:57937900-57937919 Msa0031240:intron 50.0%
AAAGCCACGAGGAGCTAAGA+TGG - chr1_1:57937982-57938001 Msa0031240:CDS 50.0%
AAGCCACGAGGAGCTAAGAT+GGG - chr1_1:57937983-57938002 Msa0031240:CDS 50.0%
AAGCCTGGCATACCAGTTGA+CGG + chr1_1:57938147-57938166 None:intergenic 50.0%
AATGCTGGTGAACTGAAGGC+AGG + chr1_1:57938285-57938304 None:intergenic 50.0%
! GCAGCAGCACCCTCTATTTT+TGG - chr1_1:57938324-57938343 Msa0031240:intron 50.0%
AGGGATGTAGATGACCCAAC+TGG + chr1_1:57938393-57938412 None:intergenic 50.0%
GGGTCATCTACATCCCTGTT+TGG - chr1_1:57938396-57938415 Msa0031240:intron 50.0%
! ACATCCCTGTTTGGTGGTCA+AGG - chr1_1:57938405-57938424 Msa0031240:intron 50.0%
TGTGCCTTGACCACCAAACA+GGG + chr1_1:57938412-57938431 None:intergenic 50.0%
ATGTGCCTTGACCACCAAAC+AGG + chr1_1:57938413-57938432 None:intergenic 50.0%
ACCTCCCAATTTGGGCAAAC+TGG - chr1_1:57938528-57938547 Msa0031240:intron 50.0%
ACCAGTTTGCCCAAATTGGG+AGG + chr1_1:57938532-57938551 None:intergenic 50.0%
!! GTGATGGGCTGCTTGAGAAA+AGG + chr1_1:57938599-57938618 None:intergenic 50.0%
CTCACATCTAATGCTCCGAC+AGG - chr1_1:57938618-57938637 Msa0031240:intron 50.0%
GCTGCTTGTCCAAAACCTGT+CGG + chr1_1:57938636-57938655 None:intergenic 50.0%
!!! GACAGGTTTTGGACAAGCAG+CGG - chr1_1:57938635-57938654 Msa0031240:intron 50.0%
!! AACAGGATATGGCTTGGTGG+AGG + chr1_1:57938844-57938863 None:intergenic 50.0%
! CCTAACAGGATATGGCTTGG+TGG + chr1_1:57938847-57938866 None:intergenic 50.0%
CCACCAAGCCATATCCTGTT+AGG - chr1_1:57938844-57938863 Msa0031240:CDS 50.0%
CTGCCTAACAGGATATGGCT+TGG + chr1_1:57938850-57938869 None:intergenic 50.0%
CAAGCCATATCCTGTTAGGC+AGG - chr1_1:57938848-57938867 Msa0031240:CDS 50.0%
CAACCCTGCCTAACAGGATA+TGG + chr1_1:57938855-57938874 None:intergenic 50.0%
ACAAGACAACCCTGCCTAAC+AGG + chr1_1:57938861-57938880 None:intergenic 50.0%
TGTTAGGCAGGGTTGTCTTG+TGG - chr1_1:57938860-57938879 Msa0031240:CDS 50.0%
GTTCTCTACACCAGGTCTAC+AGG + chr1_1:57939063-57939082 None:intergenic 50.0%
ACACCTTCTTTCCAATCGGC+TGG - chr1_1:57939388-57939407 Msa0031240:CDS 50.0%
GTACCAGCCGATTGGAAAGA+AGG + chr1_1:57939394-57939413 None:intergenic 50.0%
!! AGGAAAAGGTACCAGCCGAT+TGG + chr1_1:57939402-57939421 None:intergenic 50.0%
AACTTTGGCCAGACACAACC+TGG - chr1_1:57939427-57939446 Msa0031240:CDS 50.0%
GGCTATTCCCCAGAGTTCTA+TGG - chr1_1:57939834-57939853 Msa0031240:CDS 50.0%
GTGGCGAGAAGTCAATAAGG+AGG + chr1_1:57940188-57940207 None:intergenic 50.0%
GAGGTGGCGAGAAGTCAATA+AGG + chr1_1:57940191-57940210 None:intergenic 50.0%
! AACGCCCTTGGATTTTCCCT+AGG + chr1_1:57940415-57940434 None:intergenic 50.0%
GGACAAATGATCAACGCCCT+TGG + chr1_1:57940427-57940446 None:intergenic 50.0%
!! GGCGTTGATCATTTGTCCCA+TGG - chr1_1:57940429-57940448 Msa0031240:intron 50.0%
TCATTTGTCCCATGGAGCAG+TGG - chr1_1:57940437-57940456 Msa0031240:intron 50.0%
GCTTTCTCAGAAGTCCTTCC+AGG + chr1_1:57940463-57940482 None:intergenic 50.0%
GGGATAAGCTCAAGAGAAGC+AGG - chr1_1:57940954-57940973 Msa0031240:intron 50.0%
CAGGTACCAAACCCAACGAT+AGG - chr1_1:57940973-57940992 Msa0031240:intron 50.0%
! ACTCTCTTTTTCCTCCGAGG+TGG + chr1_1:57941000-57941019 None:intergenic 50.0%
GATGCATGCTTCGTAGGTAC+AGG + chr1_1:57941583-57941602 None:intergenic 50.0%
CCATTGGATGCATGCTTCGT+AGG + chr1_1:57941589-57941608 None:intergenic 50.0%
CCTACGAAGCATGCATCCAA+TGG - chr1_1:57941586-57941605 Msa0031240:intron 50.0%
CACTAATGCCAAAGCTGCGA+CGG - chr1_1:57941716-57941735 Msa0031240:CDS 50.0%
TAATCAGACCGTCGCAGCTT+TGG + chr1_1:57941727-57941746 None:intergenic 50.0%
GCCGCCAATTCATGAATACG+AGG + chr1_1:57941760-57941779 None:intergenic 50.0%
GCTAAGGAAAGAGCTGAACC+AGG - chr1_1:57941778-57941797 Msa0031240:intron 50.0%
GACTTTGTCGTTGGAAGGCA+AGG - chr1_1:57941820-57941839 Msa0031240:intron 50.0%
GTCGTTGGAAGGCAAGGTTA+TGG - chr1_1:57941826-57941845 Msa0031240:intron 50.0%
TTGGGTGTGACAGATGTACG+AGG - chr1_1:57941862-57941881 Msa0031240:intron 50.0%
TGGGTGTGACAGATGTACGA+GGG - chr1_1:57941863-57941882 Msa0031240:intron 50.0%
!! TTGAGGAGTGTTACCTCAGC+AGG + chr1_1:57941985-57942004 None:intergenic 50.0%
ACTGGGCAACAGTACACTGA+AGG - chr1_1:57942027-57942046 Msa0031240:intron 50.0%
ACACTGAAGGACCGAGAATC+GGG - chr1_1:57942040-57942059 Msa0031240:intron 50.0%
GATGCTCAAGAGAAAGGCTG+AGG - chr1_1:57942074-57942093 Msa0031240:exon 50.0%
AAGAGAAAGGCTGAGGACCA+AGG - chr1_1:57942081-57942100 Msa0031240:exon 50.0%
TAGTTACCGGGATCGAACCG+GGG - chr1_1:57935485-57935504 Msa0031240:CDS 55.0%
! TTAAGTCCCCGGTTCGATCC+CGG + chr1_1:57935494-57935513 None:intergenic 55.0%
ACCAGCCGAGCTACCTATGT+GGG - chr1_1:57935545-57935564 Msa0031240:CDS 55.0%
! ACGGATTGAGACGAGCCGAA+CGG + chr1_1:57935675-57935694 None:intergenic 55.0%
GGCTCGTCTCAATCCGTGTT+CGG - chr1_1:57935678-57935697 Msa0031240:CDS 55.0%
GCTCGTCTCAATCCGTGTTC+GGG - chr1_1:57935679-57935698 Msa0031240:CDS 55.0%
GTTGTTCTGCTGCCCGAACA+CGG + chr1_1:57935694-57935713 None:intergenic 55.0%
! CCCGTTTGCTGCGATCCAAA+TGG + chr1_1:57935762-57935781 None:intergenic 55.0%
CTGAGCTGCGCCAAATACAC+CGG + chr1_1:57935811-57935830 None:intergenic 55.0%
GGGGTGGAATATGAAGGTGG+GGG + chr1_1:57936741-57936760 None:intergenic 55.0%
GGGGGTGGAATATGAAGGTG+GGG + chr1_1:57936742-57936761 None:intergenic 55.0%
GGGAAGGGGGTGGAATATGA+AGG + chr1_1:57936747-57936766 None:intergenic 55.0%
TTCACATGGAGGTGGGGGAA+GGG + chr1_1:57936762-57936781 None:intergenic 55.0%
TTTCACATGGAGGTGGGGGA+AGG + chr1_1:57936763-57936782 None:intergenic 55.0%
GGTTGGGTGGCACTTCCAAA+TGG + chr1_1:57937120-57937139 None:intergenic 55.0%
! TGCTGGTTGTGATGGTTGGG+TGG + chr1_1:57937133-57937152 None:intergenic 55.0%
GTGCCTGTCGAACCAAATGC+TGG + chr1_1:57937219-57937238 None:intergenic 55.0%
TCGACAGGCACTCCTGCATT+TGG - chr1_1:57937228-57937247 Msa0031240:CDS 55.0%
GTGCTCGTAGCACCAAATGC+AGG + chr1_1:57937243-57937262 None:intergenic 55.0%
GCTACGAGCACTCCTGCATT+TGG - chr1_1:57937252-57937271 Msa0031240:intron 55.0%
GTGCTCGTAGCACCAAATGC+AGG + chr1_1:57937243-57937262 None:intergenic 55.0%
TGCTGGGTGCACCAAAAGCA+GGG + chr1_1:57937314-57937333 None:intergenic 55.0%
TGCTGGGTGCACCAAAAGCA+GGG + chr1_1:57937314-57937333 None:intergenic 55.0%
! TGCTGGTTGCACCGAAAGCT+GGG + chr1_1:57937362-57937381 None:intergenic 55.0%
! CAACCAGCACCCCAGCTTTT+GGG - chr1_1:57937373-57937392 Msa0031240:intron 55.0%
! AACCAGCACCCCAGCTTTTG+GGG - chr1_1:57937374-57937393 Msa0031240:intron 55.0%
! TGCTGGTTGCCCCAAAAGCT+GGG + chr1_1:57937386-57937405 None:intergenic 55.0%
! TGAACCAAATGCAGGGGTGC+TGG + chr1_1:57937403-57937422 None:intergenic 55.0%
! GGTAACACAGGGGGTGCATT+TGG - chr1_1:57937441-57937460 Msa0031240:CDS 55.0%
!! ACCACTGTGTTTGGTGGTGG+TGG - chr1_1:57937474-57937493 Msa0031240:CDS 55.0%
!! CCACTGTGTTTGGTGGTGGT+GGG - chr1_1:57937475-57937494 Msa0031240:CDS 55.0%
!! CACTGTGTTTGGTGGTGGTG+GGG - chr1_1:57937476-57937495 Msa0031240:CDS 55.0%
!! ACTGTGTTTGGTGGTGGTGG+GGG - chr1_1:57937477-57937496 Msa0031240:CDS 55.0%
!! TTTGGTGGTGGTGGGGGATT+TGG - chr1_1:57937483-57937502 Msa0031240:CDS 55.0%
!! TTGGTGGTGGTGGGGGATTT+GGG - chr1_1:57937484-57937503 Msa0031240:CDS 55.0%
ACCAAAAGCAGGAGAGCTGG+AGG + chr1_1:57937559-57937578 None:intergenic 55.0%
AGCACCAAAAGCAGGAGAGC+TGG + chr1_1:57937562-57937581 None:intergenic 55.0%
!! TTTGGTGCTTCTAGTGCCCC+AGG - chr1_1:57937573-57937592 Msa0031240:intron 55.0%
CTGACTAAAAGCCGGAGTGG+TGG + chr1_1:57937613-57937632 None:intergenic 55.0%
TTTGGCACCAGCAGCCCATT+TGG - chr1_1:57937645-57937664 Msa0031240:intron 55.0%
TTGGCACCAGCAGCCCATTT+GGG - chr1_1:57937646-57937665 Msa0031240:intron 55.0%
! GAAGCAGATAGTGGCACCTC+TGG - chr1_1:57937909-57937928 Msa0031240:intron 55.0%
! AGATAGTGGCACCTCTGGAC+AGG - chr1_1:57937914-57937933 Msa0031240:intron 55.0%
CAACTTTGCAGCCTGTCCAG+AGG + chr1_1:57937928-57937947 None:intergenic 55.0%
CTCTGGACAGGCTGCAAAGT+TGG - chr1_1:57937926-57937945 Msa0031240:intron 55.0%
AACTGGCTGTGACGAGGAGT+TGG + chr1_1:57938376-57938395 None:intergenic 55.0%
AACTCCTCGTCACAGCCAGT+TGG - chr1_1:57938375-57938394 Msa0031240:intron 55.0%
ACTCCTCGTCACAGCCAGTT+GGG - chr1_1:57938376-57938395 Msa0031240:intron 55.0%
GCCCCTACAAATGCACAGTC+TGG - chr1_1:57938492-57938511 Msa0031240:intron 55.0%
!! AGGATATGGCTTGGTGGAGG+CGG + chr1_1:57938841-57938860 None:intergenic 55.0%
! GCTGGTGCAAGTAGCTTTGC+TGG - chr1_1:57939554-57939573 Msa0031240:CDS 55.0%
! GCATCAGCCTTTGGTGTGGT+TGG + chr1_1:57940382-57940401 None:intergenic 55.0%
!! AAGGGCATCAGCCTTTGGTG+TGG + chr1_1:57940386-57940405 None:intergenic 55.0%
GGTGGTCCTATCGTTGGGTT+TGG + chr1_1:57940982-57941001 None:intergenic 55.0%
ACCCAACGATAGGACCACCT+CGG - chr1_1:57940983-57941002 Msa0031240:intron 55.0%
TCCGAGGTGGTCCTATCGTT+GGG + chr1_1:57940987-57941006 None:intergenic 55.0%
TTCAGCCCTTGTCCAACAGG+AGG + chr1_1:57941958-57941977 None:intergenic 55.0%
AGGGCTGAATAAGCCTGCTG+AGG - chr1_1:57941969-57941988 Msa0031240:intron 55.0%
CACCAGCCGAGCTACCTATG+TGG - chr1_1:57935544-57935563 Msa0031240:CDS 60.0%
TCCCACATAGGTAGCTCGGC+TGG + chr1_1:57935549-57935568 None:intergenic 60.0%
CGGATTGAGACGAGCCGAAC+GGG + chr1_1:57935674-57935693 None:intergenic 60.0%
AGCTGCGCCAAATACACCGG+TGG + chr1_1:57935808-57935827 None:intergenic 60.0%
TCACATGGAGGTGGGGGAAG+GGG + chr1_1:57936761-57936780 None:intergenic 60.0%
TGCTGGGTGCACCAAACGCA+GGG + chr1_1:57937290-57937309 None:intergenic 60.0%
!! GCACCAAAAGCAGGGGTGCT+GGG + chr1_1:57937306-57937325 None:intergenic 60.0%
! TGCACCAAAAGCAGGGGTGC+TGG + chr1_1:57937307-57937326 None:intergenic 60.0%
GCTGGGTGCACCAAAAGCAG+GGG + chr1_1:57937313-57937332 None:intergenic 60.0%
GTGCTGGGTGCACCAAAAGC+AGG + chr1_1:57937315-57937334 None:intergenic 60.0%
!! GCACCAAAAGCAGGGGTGCT+GGG + chr1_1:57937306-57937325 None:intergenic 60.0%
! TGCACCAAAAGCAGGGGTGC+TGG + chr1_1:57937307-57937326 None:intergenic 60.0%
GCTGGGTGCACCAAAAGCAG+GGG + chr1_1:57937313-57937332 None:intergenic 60.0%
GTGCTGGGTGCACCAAAAGC+AGG + chr1_1:57937315-57937334 None:intergenic 60.0%
GCTGGTTGCACCGAAAGCTG+GGG + chr1_1:57937361-57937380 None:intergenic 60.0%
!! GTGCTGGTTGCACCGAAAGC+TGG + chr1_1:57937363-57937382 None:intergenic 60.0%
! GCAACCAGCACCCCAGCTTT+TGG - chr1_1:57937372-57937391 Msa0031240:intron 60.0%
GCTGGTTGCCCCAAAAGCTG+GGG + chr1_1:57937385-57937404 None:intergenic 60.0%
!! GTGCTGGTTGCCCCAAAAGC+TGG + chr1_1:57937387-57937406 None:intergenic 60.0%
GCAACCAGCACCCCTGCATT+TGG - chr1_1:57937396-57937415 Msa0031240:intron 60.0%
CCCACCACCACCAAACACAG+TGG + chr1_1:57937478-57937497 None:intergenic 60.0%
!! TGGTGGTGGTGGGGGATTTG+GGG - chr1_1:57937485-57937504 Msa0031240:CDS 60.0%
! GCCTCCAGCTCTCCTGCTTT+TGG - chr1_1:57937555-57937574 Msa0031240:intron 60.0%
!! CGTACTCCCAAATGGGCTGC+TGG + chr1_1:57937655-57937674 None:intergenic 60.0%
GGATTTGGAGGTCAACGGGG+TGG - chr1_1:57937855-57937874 Msa0031240:intron 60.0%
CCTCCCATCTTAGCTCCTCG+TGG + chr1_1:57937989-57938008 None:intergenic 60.0%
CCACGAGGAGCTAAGATGGG+AGG - chr1_1:57937986-57938005 Msa0031240:CDS 60.0%
ACCAGTTGACGGAGGAGCAG+AGG + chr1_1:57938136-57938155 None:intergenic 60.0%
CCTGGCATACCAGTTGACGG+AGG + chr1_1:57938144-57938163 None:intergenic 60.0%
CCTCCGTCAACTGGTATGCC+AGG - chr1_1:57938141-57938160 Msa0031240:intron 60.0%
ACACCCGCAACTGCTCCCTT+TGG - chr1_1:57938348-57938367 Msa0031240:intron 60.0%
CACCCGCAACTGCTCCCTTT+GGG - chr1_1:57938349-57938368 Msa0031240:intron 60.0%
ACCCGCAACTGCTCCCTTTG+GGG - chr1_1:57938350-57938369 Msa0031240:intron 60.0%
GACGAGGAGTTGGCCCCAAA+GGG + chr1_1:57938366-57938385 None:intergenic 60.0%
TGACGAGGAGTTGGCCCCAA+AGG + chr1_1:57938367-57938386 None:intergenic 60.0%
TGACCCAACTGGCTGTGACG+AGG + chr1_1:57938382-57938401 None:intergenic 60.0%
CTTCCAGGCCACTGCTCCAT+GGG + chr1_1:57940448-57940467 None:intergenic 60.0%
CTCCGAGGTGGTCCTATCGT+TGG + chr1_1:57940988-57941007 None:intergenic 60.0%
CAACGATAGGACCACCTCGG+AGG - chr1_1:57940986-57941005 Msa0031240:intron 60.0%
ACACTCAGTGGGCACAGAGC+TGG - chr1_1:57941652-57941671 Msa0031240:CDS 60.0%
GGGCAGTCATCGAGCCCGTT+CGG - chr1_1:57935657-57935676 Msa0031240:CDS 65.0%
CACATGGAGGTGGGGGAAGG+GGG + chr1_1:57936760-57936779 None:intergenic 65.0%
GCTACGAGCACCCCTGCGTT+TGG - chr1_1:57937276-57937295 Msa0031240:intron 65.0%
GCTGGGTGCACCAAACGCAG+GGG + chr1_1:57937289-57937308 None:intergenic 65.0%
GTGCTGGGTGCACCAAACGC+AGG + chr1_1:57937291-57937310 None:intergenic 65.0%
! GCACCCAGCACCCCTGCTTT+TGG - chr1_1:57937300-57937319 Msa0031240:intron 65.0%
! GCACCCAGCACCCCTGCTTT+TGG - chr1_1:57937300-57937319 Msa0031240:intron 65.0%
GCACCCAGCACCCCAGCTTT+CGG - chr1_1:57937348-57937367 Msa0031240:intron 65.0%
! GCACCGAAAGCTGGGGTGCT+GGG + chr1_1:57937354-57937373 None:intergenic 65.0%
TGCACCGAAAGCTGGGGTGC+TGG + chr1_1:57937355-57937374 None:intergenic 65.0%
TGCCCCAAAAGCTGGGGTGC+TGG + chr1_1:57937379-57937398 None:intergenic 65.0%
GAGCTGGAGGCCCCAAATGC+AGG + chr1_1:57937546-57937565 None:intergenic 65.0%
! GACGGAGGAGCAGAGGCATG+TGG + chr1_1:57938129-57938148 None:intergenic 65.0%
GCCTCTGCTCCTCCGTCAAC+TGG - chr1_1:57938132-57938151 Msa0031240:intron 65.0%
GCCCCAAAGGGAGCAGTTGC+GGG + chr1_1:57938354-57938373 None:intergenic 65.0%
GGCCCCAAAGGGAGCAGTTG+CGG + chr1_1:57938355-57938374 None:intergenic 65.0%
TGTCCCATGGAGCAGTGGCC+TGG - chr1_1:57940442-57940461 Msa0031240:intron 65.0%
CCTTCCAGGCCACTGCTCCA+TGG + chr1_1:57940449-57940468 None:intergenic 65.0%
CCATGGAGCAGTGGCCTGGA+AGG - chr1_1:57940446-57940465 Msa0031240:intron 65.0%
CAGTGGGCACAGAGCTGGTG+AGG - chr1_1:57941657-57941676 Msa0031240:CDS 65.0%
ATGGAGGTGGGGGAAGGGGG+TGG + chr1_1:57936757-57936776 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 57934893 57942512 57934893 ID=Msa0031240;Name=Msa0031240
chr1_1 mRNA 57934893 57942512 57934893 ID=Msa0031240-mRNA-1;Parent=Msa0031240;Name=Msa0031240-mRNA-1;_AED=0.05;_eAED=0.05;_QI=219|0.64|0.55|1|0.58|0.5|18|297|997
chr1_1 exon 57934893 57935869 57934893 ID=Msa0031240-mRNA-1:exon:17566;Parent=Msa0031240-mRNA-1
chr1_1 exon 57936388 57936450 57936388 ID=Msa0031240-mRNA-1:exon:17565;Parent=Msa0031240-mRNA-1
chr1_1 exon 57936882 57937056 57936882 ID=Msa0031240-mRNA-1:exon:17564;Parent=Msa0031240-mRNA-1
chr1_1 exon 57937141 57937251 57937141 ID=Msa0031240-mRNA-1:exon:17563;Parent=Msa0031240-mRNA-1
chr1_1 exon 57937433 57937571 57937433 ID=Msa0031240-mRNA-1:exon:17562;Parent=Msa0031240-mRNA-1
chr1_1 exon 57937784 57937850 57937784 ID=Msa0031240-mRNA-1:exon:17561;Parent=Msa0031240-mRNA-1
chr1_1 exon 57937957 57938044 57937957 ID=Msa0031240-mRNA-1:exon:17560;Parent=Msa0031240-mRNA-1
chr1_1 exon 57938749 57938978 57938749 ID=Msa0031240-mRNA-1:exon:17559;Parent=Msa0031240-mRNA-1
chr1_1 exon 57938985 57939194 57938985 ID=Msa0031240-mRNA-1:exon:17558;Parent=Msa0031240-mRNA-1
chr1_1 exon 57939207 57939284 57939207 ID=Msa0031240-mRNA-1:exon:17557;Parent=Msa0031240-mRNA-1
chr1_1 exon 57939376 57939600 57939376 ID=Msa0031240-mRNA-1:exon:17556;Parent=Msa0031240-mRNA-1
chr1_1 exon 57939715 57939954 57939715 ID=Msa0031240-mRNA-1:exon:17555;Parent=Msa0031240-mRNA-1
chr1_1 exon 57939964 57940170 57939964 ID=Msa0031240-mRNA-1:exon:17554;Parent=Msa0031240-mRNA-1
chr1_1 exon 57940180 57940353 57940180 ID=Msa0031240-mRNA-1:exon:17553;Parent=Msa0031240-mRNA-1
chr1_1 exon 57941451 57941579 57941451 ID=Msa0031240-mRNA-1:exon:17552;Parent=Msa0031240-mRNA-1
chr1_1 exon 57941595 57941753 57941595 ID=Msa0031240-mRNA-1:exon:17551;Parent=Msa0031240-mRNA-1
chr1_1 exon 57942065 57942126 57942065 ID=Msa0031240-mRNA-1:exon:17550;Parent=Msa0031240-mRNA-1
chr1_1 exon 57942337 57942512 57942337 ID=Msa0031240-mRNA-1:exon:17549;Parent=Msa0031240-mRNA-1
chr1_1 five_prime_UTR 57942337 57942512 57942337 ID=Msa0031240-mRNA-1:five_prime_utr;Parent=Msa0031240-mRNA-1
chr1_1 five_prime_UTR 57942084 57942126 57942084 ID=Msa0031240-mRNA-1:five_prime_utr;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57942065 57942083 57942065 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57941595 57941753 57941595 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57941451 57941579 57941451 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57940180 57940353 57940180 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57939964 57940170 57939964 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57939715 57939954 57939715 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57939376 57939600 57939376 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57939207 57939284 57939207 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57938985 57939194 57938985 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57938749 57938978 57938749 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57937957 57938044 57937957 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57937784 57937850 57937784 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57937433 57937571 57937433 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57937141 57937251 57937141 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57936882 57937056 57936882 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57936388 57936450 57936388 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 CDS 57935190 57935869 57935190 ID=Msa0031240-mRNA-1:cds;Parent=Msa0031240-mRNA-1
chr1_1 three_prime_UTR 57934893 57935189 57934893 ID=Msa0031240-mRNA-1:three_prime_utr;Parent=Msa0031240-mRNA-1
Gene Sequence

>Msa0031240

ATGTTTGGTTCAACAAATCCTTTCGGGCAGTCATCGAGCCCGTTCGGCTCGTCTCAATCCGTGTTCGGGCAGCAGAACAACACAAATAACAATCCTTTTGCACCTAAGCCATTTGGGAGTCCAACTCCATTTGGATCGCAGCAAACGGGTAATTCCGTGTTTGGTGGTACTTCCACCGCTCAGCCATCGTCTCCGTTTTCTTCCAATACTTTCGGCGCTTCATCATCTCCAGCTTTTGGTACTTCAATGCCGGCATTTGGGGCATCTTCAACTCCGGCTTTTGGTAATTCGTCATCGTCATTTGGTGGATCATCAGTGTTTGGTCAGAAGCCTTCTTTTGGAGGTTTTGGCTCTACTCCTACTCAAACAAGTCCATTTGGAAGTGCCACCCAACCATCACAACCAGCATTTGGAAGTAACACCCAACAGTCGCAACCAGCATTTGGAAGCAGCATATTTGGTTCCTCAACACCAGCATTTGGCACTCCTGCATTTGGTGCTACGAGCACTCCTGCATTTGGTGCTACGAGCACCCCTGCGTTTGGTGCACCCAGCACCCCTGCTTTTGGTGCACCCAGCACCCCTGCTTTTGGTGCACCCAGCACCCCAGCTTTCGGTGCAACCAGCACCCCAGCTTTTGGGGCAACCAGCACCCCTGCATTTGGTTCAACTTCAACCTCAGCTTTTGGGGGTGCATTTGGCATGTCAAATACCACTGTGTTTGGTGGTGGTGGGGGATTTGGGGCTTCAAGCAGTCCTGTATTTGGTTCATCAAGCACGCCTGCATTTGGGGCCTCCAGCTCTCCTGCTTTTGGTGCTTCTAGTGCCCCAGGTTTTAGTTTTGGTTCCACCACTCCGGCTTTTAGTCAGTCTAGTTCTGCATTTGGCACCAGCAGCCCATTTGGGAGTACGACCTCTAATTTTGGAGGATCACAGACTCCCACTCAAGCATTTGGAAGTACTGGTATTGGGCAGTCAGGATTTGGAGGTCAACGGGGTGGAAGTAGAATAGCTAGTTACTCAGCTACAGTGGAAGCAGATAGTGGCACCTCTGGACAGGCTGCAAAGTTGGAGTCAATATCAGCCATGCCTGTTTACAAAGATAAAAGCCACGAGGAGCTAAGATGGGAGGACTATCAATTGGGAGATAAAGGTGGACCACATGCCTCTGCTCCTCCGTCAACTGGTATGCCAGGCTTTAATTCGTCTACGACACAGACAAATGTTTTTGCCAATCCTTTCTCTAGTAGCACAACACCTAATTCTAACCCATTTGCACAAAAGACATTTGGAACTTCAGCTCCTGCCTTCAGTTCACCAGCATTTCCTTCTTCATCATCATCAGCAGCAGCACCCTCTATTTTTGGAACACCCGCAACTGCTCCCTTTGGGGCCAACTCCTCGTCACAGCCAGTTGGGTCATCTACATCCCTGTTTGGTGGCACATCTTCCCAATTTAGTACAAACATTTTTGGCAACACCCAGCCAAGCCTATTTAACACTTCTGCCCCTACAAATGCACAGTCTGGTTTTGGTCAGAATACCTCCCAATTTGGGCAAACTGGTGCTTTTAATCAACCAAGCATGTTCAATCAACCTTCATCTGGAAGCCTTTTCTCAAGCAGCCCATCACTCACATCTAATGCTCCGACAGGTTTTGGACAAGCAGCGCCGTCCATGTCAACACCTTTCCAATCTACACCTTCTTTCCAATCGGCTGGTACCTTTTCCTTTAGCAACTTTGGCCAGACACAACCTGCTGGTGCAAGTAGCTTTGCTGGAGCTCAAACTCAAAGCATGTTTGGTCAGAATAATGTTGGACTTCAGGCTATTCCCCAGAGTTCTATGGTTGCACAAGCAGCACCCATTACAAACCCATTTGGAACACTTCCTGCTTTGCCTCAGATGTCAATTGGTCGAGTTGGAACCACTCCTTCCGTTCAATATGGTATCTCTAGCATGCCTGCCCAAGACAAACCTGCTACTGTAAGAATATCCTCCTTATTGACTTCTCGCCACCTCTCACAAAGAAGAGTCAAGTTTCCTATAAGGAAATATAAGAATGAGGGATCAAAGGTTCCATTCTTTAGTGATGATGAAGATACTCCAACCACACCAAAGGCTGATGCCCTTTTCATTCCTAGGGAAAATCCAAGGGCGTTGATCATTTGTCCCATGGAGCAGTGGCCTGGAAGGACTTCTGAGAAAGCATCCTCTTTTAAGGATAGATACACCTCCGTGAATGAGAATGGGATAAGCTCAAGAGAAGCAGGTACCAAACCCAACGATAGGACCACCTCGGAGGAAAAAGAGAGGACTGCAGCTGAAAATGGTGTTGTCAAGGAGCAAGTTCAGCAGCCTGTACCTACGAAGCATGCATCCAATGGGAATAACGAAGACCATTCTCTGCAAAAGGCGGATATGTACAAGACACTCAGTGGGCACAGAGCTGGTGAGGCTGCCATTGTGTATGAACATGGAGCTGATGTTGAGGCACTAATGCCAAAGCTGCGACGGTCTGATTACTACACACTGCCTCGTATTCATGAATTGGCGGCTAAGGAAAGAGCTGAACCAGGATTCTGCAGTCATGTCAAGGACTTTGTCGTTGGAAGGCAAGGTTATGGCAGCATCAGATTTTTGGGTGTGACAGATGTACGAGGGATTGATCTCGAGTCCATTGTTCAGTTTAACAATCGTGAGGTGATTGTATACATGGATGATTCAAAGAAACCTCCTGTTGGACAAGGGCTGAATAAGCCTGCTGAGGTAACACTCCTCAACATAAAATGTTTTGACAAAAAAACTGGGCAACAGTACACTGAAGGACCGAGAATCGGGAAATATAAAGAGATGCTCAAGAGAAAGGCTGAGGACCAAGGTGCTGAGTTTGTATCATATGATCCCAATAAAGGAGAATGGAAGTTCAGGGTCAACCACTTCAGCGTTTACAATCTGGTAGATGAAGACAGTTGGATACAAGCTGATGTATAA
Protein sequence

>Msa0031240

MFGSTNPFGQSSSPFGSSQSVFGQQNNTNNNPFAPKPFGSPTPFGSQQTGNSVFGGTSTAQPSSPFSSNTFGASSSPAFGTSMPAFGASSTPAFGNSSSSFGGSSVFGQKPSFGGFGSTPTQTSPFGSATQPSQPAFGSNTQQSQPAFGSSIFGSSTPAFGTPAFGATSTPAFGATSTPAFGAPSTPAFGAPSTPAFGAPSTPAFGATSTPAFGATSTPAFGSTSTSAFGGAFGMSNTTVFGGGGGFGASSSPVFGSSSTPAFGASSSPAFGASSAPGFSFGSTTPAFSQSSSAFGTSSPFGSTTSNFGGSQTPTQAFGSTGIGQSGFGGQRGGSRIASYSATVEADSGTSGQAAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPHASAPPSTGMPGFNSSTTQTNVFANPFSSSTTPNSNPFAQKTFGTSAPAFSSPAFPSSSSSAAAPSIFGTPATAPFGANSSSQPVGSSTSLFGGTSSQFSTNIFGNTQPSLFNTSAPTNAQSGFGQNTSQFGQTGAFNQPSMFNQPSSGSLFSSSPSLTSNAPTGFGQAAPSMSTPFQSTPSFQSAGTFSFSNFGQTQPAGASSFAGAQTQSMFGQNNVGLQAIPQSSMVAQAAPITNPFGTLPALPQMSIGRVGTTPSVQYGISSMPAQDKPATVRISSLLTSRHLSQRRVKFPIRKYKNEGSKVPFFSDDEDTPTTPKADALFIPRENPRALIICPMEQWPGRTSEKASSFKDRYTSVNENGISSREAGTKPNDRTTSEEKERTAAENGVVKEQVQQPVPTKHASNGNNEDHSLQKADMYKTLSGHRAGEAAIVYEHGADVEALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKDFVVGRQGYGSIRFLGVTDVRGIDLESIVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGQQYTEGPRIGKYKEMLKRKAEDQGAEFVSYDPNKGEWKFRVNHFSVYNLVDEDSWIQADV*