AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0031830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031830 MtrunA17_Chr1g0190011 97.281 331 7 1 1 331 1 329 0.0 654
Msa0031830 MtrunA17_Chr7g0274821 60.000 290 113 3 43 330 74 362 1.34e-106 316
Msa0031830 MtrunA17_Chr5g0397551 39.565 230 104 11 43 251 70 285 5.25e-33 124
Msa0031830 MtrunA17_Chr4g0054661 42.857 203 104 6 31 226 61 258 1.29e-32 124
Msa0031830 MtrunA17_Chr1g0179461 39.796 196 101 5 43 224 69 261 3.33e-32 123
Msa0031830 MtrunA17_Chr7g0245841 42.259 239 110 10 43 269 60 282 4.48e-32 122
Msa0031830 MtrunA17_Chr8g0386741 37.368 190 105 6 43 224 97 280 1.32e-28 113
Msa0031830 MtrunA17_Chr6g0476061 37.561 205 112 5 40 230 48 250 1.11e-27 110
Msa0031830 MtrunA17_Chr8g0351761 39.487 195 105 6 43 228 71 261 1.70e-27 110
Msa0031830 MtrunA17_Chr8g0349091 40.838 191 95 5 43 224 89 270 4.03e-27 108
Msa0031830 MtrunA17_Chr4g0056761 39.252 214 109 6 25 224 54 260 3.19e-25 103
Msa0031830 MtrunA17_Chr5g0398621 36.364 198 100 8 39 229 42 220 3.34e-25 101
Msa0031830 MtrunA17_Chr1g0188211 40.000 210 94 8 40 224 46 248 1.74e-24 101
Msa0031830 MtrunA17_Chr7g0247431 38.144 194 98 5 43 224 89 272 3.44e-24 101
Msa0031830 MtrunA17_Chr4g0027351 45.794 107 57 1 114 219 22 128 2.16e-21 88.6
Msa0031830 MtrunA17_Chr4g0027371 38.750 160 73 4 114 250 22 179 3.85e-21 90.5
Msa0031830 MtrunA17_Chr4g0027331 42.373 118 59 2 114 224 22 137 6.35e-20 84.7
Msa0031830 MtrunA17_Chr1g0168121 41.045 134 75 2 92 225 53 182 4.65e-18 82.8
Msa0031830 MtrunA17_Chr3g0112131 42.857 112 63 1 114 225 109 219 1.85e-17 81.6
Msa0031830 MtrunA17_Chr1g0165101 32.850 207 111 6 44 230 86 284 2.70e-17 81.6
Msa0031830 MtrunA17_Chr1g0190051 41.912 136 75 2 90 225 83 214 2.06e-16 78.6
Msa0031830 MtrunA17_Chr8g0351651 41.441 111 64 1 114 224 116 225 6.93e-16 77.0
Msa0031830 MtrunA17_Chr6g0476241 34.031 191 108 6 39 227 116 290 1.59e-15 75.9
Msa0031830 MtrunA17_Chr3g0133051 39.286 112 59 4 125 228 111 221 1.26e-14 73.2
Msa0031830 MtrunA17_Chr5g0427311 32.143 140 88 5 94 228 62 199 2.17e-14 71.6
Msa0031830 MtrunA17_Chr7g0250031 39.259 135 74 3 94 225 68 197 6.97e-14 70.9
Msa0031830 MtrunA17_Chr4g0027301 38.053 113 61 2 114 219 29 139 7.18e-14 68.2
Msa0031830 MtrunA17_Chr5g0417581 33.898 118 68 2 114 225 22 135 9.26e-14 68.9
Msa0031830 MtrunA17_Chr5g0398531 35.833 120 76 1 106 225 122 240 1.60e-13 70.5
Msa0031830 MtrunA17_Chr4g0054651 39.286 112 67 1 114 225 106 216 3.89e-13 68.9
Msa0031830 MtrunA17_Chr5g0443311 35.294 119 76 1 106 224 73 190 5.64e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0031830 AT3G04590.2 44.625 307 145 10 43 330 105 405 2.71e-61 201
Msa0031830 AT3G04590.1 50.495 202 95 3 43 242 105 303 8.03e-52 174
Msa0031830 AT2G33620.1 42.254 213 106 8 43 248 97 299 6.35e-37 135
Msa0031830 AT2G33620.4 42.254 213 106 8 43 248 97 299 6.35e-37 135
Msa0031830 AT2G33620.2 42.254 213 106 8 43 248 97 299 6.35e-37 135
Msa0031830 AT2G33620.3 42.254 213 106 8 43 248 97 299 6.35e-37 135
Msa0031830 AT4G12080.1 42.929 198 96 7 43 224 89 285 1.02e-35 132
Msa0031830 AT4G25320.1 53.846 117 50 2 111 224 166 281 1.81e-32 125
Msa0031830 AT5G28590.1 38.655 238 99 11 93 317 12 215 1.83e-30 115
Msa0031830 AT5G51590.1 52.137 117 52 2 111 224 178 293 1.47e-29 117
Msa0031830 AT2G45850.1 39.899 198 95 6 38 224 93 277 1.50e-29 116
Msa0031830 AT2G45850.2 39.899 198 95 6 38 224 93 277 1.50e-29 116
Msa0031830 AT5G62260.1 37.379 206 103 4 43 226 76 277 1.72e-29 117
Msa0031830 AT5G62260.3 37.379 206 103 4 43 226 76 277 1.72e-29 117
Msa0031830 AT4G22770.2 39.500 200 97 7 43 224 72 265 1.36e-28 113
Msa0031830 AT4G22770.1 39.500 200 97 7 43 224 72 265 1.36e-28 113
Msa0031830 AT5G46640.1 40.611 229 119 7 43 257 102 327 1.58e-28 114
Msa0031830 AT4G00200.2 41.237 194 91 4 43 224 56 238 8.56e-28 110
Msa0031830 AT4G00200.1 41.237 194 91 4 43 224 56 238 8.56e-28 110
Msa0031830 AT2G45850.3 39.196 199 97 6 38 225 93 278 9.08e-28 109
Msa0031830 AT5G62260.2 37.209 215 106 5 30 219 60 270 1.06e-27 110
Msa0031830 AT1G63470.1 39.267 191 103 7 43 224 105 291 5.38e-27 109
Msa0031830 AT3G61310.1 38.119 202 88 5 40 224 98 279 3.50e-25 104
Msa0031830 AT4G17950.1 33.878 245 125 9 43 257 131 368 7.17e-25 104
Msa0031830 AT1G63480.5 36.316 190 99 6 43 224 93 268 1.29e-23 100
Msa0031830 AT1G63480.7 36.316 190 99 6 43 224 93 268 1.29e-23 100
Msa0031830 AT1G63480.4 36.316 190 99 6 43 224 93 268 1.29e-23 100
Msa0031830 AT1G63480.3 36.316 190 99 6 43 224 93 268 1.29e-23 100
Msa0031830 AT1G63480.6 36.316 190 99 6 43 224 93 268 1.29e-23 100
Msa0031830 AT1G63480.2 34.328 201 88 6 43 224 99 274 1.52e-23 100
Msa0031830 AT1G63480.1 34.328 201 88 6 43 224 99 274 1.52e-23 100
Msa0031830 AT3G60870.1 34.454 119 75 2 106 224 81 196 3.63e-19 86.3
Msa0031830 AT1G76500.1 37.190 121 66 2 114 225 102 221 1.58e-15 76.3
Msa0031830 AT5G49700.1 36.885 122 69 4 114 228 86 206 6.50e-15 74.3
Msa0031830 AT4G14465.1 41.964 112 64 1 114 225 97 207 2.38e-14 72.8
Msa0031830 AT3G04570.1 36.806 144 79 3 90 225 89 228 5.00e-13 69.3
Msa0031830 AT1G14490.1 33.333 114 66 3 125 228 40 153 1.74e-12 66.2
Msa0031830 AT3G55560.1 38.393 112 67 2 114 224 118 228 2.70e-12 67.0
Msa0031830 AT1G14490.2 33.333 114 66 3 125 228 59 172 2.86e-12 65.9
Msa0031830 AT4G35390.1 40.351 114 65 2 114 225 93 205 3.23e-12 66.6
Msa0031830 AT2G45430.1 34.146 123 76 2 106 224 111 232 8.60e-12 65.5
Msa0031830 AT4G22810.1 34.146 123 77 2 106 225 127 248 2.09e-11 64.3
Msa0031830 AT4G12050.1 35.537 121 76 2 106 225 140 259 3.46e-11 63.9

Find 145 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGGGAGACTCGTACTTTC+TGG 0.107027 1_1:-58643903 None:intergenic
GCATGAGCATCATAATATTT+TGG 0.164704 1_1:-58645719 None:intergenic
TTTGGTAATGGGCAGGATTT+AGG 0.187764 1_1:-58643607 None:intergenic
AGTGAACCAGCATCAAATTT+AGG 0.238092 1_1:+58648416 Msa0031830:CDS
ACCTTTCCATCCCTCGGATT+GGG 0.241876 1_1:+58648550 Msa0031830:CDS
AAGATTAATCCTTGGTAGTT+AGG 0.247171 1_1:+58648812 Msa0031830:three_prime_UTR
AGCTCTAGAGCTGATATTTA+AGG 0.250512 1_1:-58648907 None:intergenic
AACAAGGAACATCAAGTTAT+TGG 0.258494 1_1:+58648485 Msa0031830:CDS
TTTGACATAATTTCACTTAC+TGG 0.260335 1_1:+58646956 Msa0031830:CDS
TTCCTGATTAAGATGGCTTT+TGG 0.267115 1_1:+58648781 Msa0031830:exon
ATGTGCATTCTGTCTGCTTC+TGG 0.268192 1_1:+58645762 Msa0031830:CDS
AAGCCAGCATTTCTTGAATC+TGG 0.277204 1_1:-58648581 None:intergenic
TCCATACCCTCCGTACTAAA+TGG 0.287575 1_1:+58643739 Msa0031830:exon
GACCCTGGTGCTGGTATAAA+AGG 0.293803 1_1:+58648359 Msa0031830:CDS
TTTGATGCTGGTTCACTAAC+TGG 0.298651 1_1:-58648410 None:intergenic
AACCGGACTGGCGGCCTTAA+GGG 0.319768 1_1:-58647077 None:intergenic
CTTGTAGGTGGAAGCATTGC+TGG 0.319912 1_1:+58647052 Msa0031830:CDS
GAACCGGACTGGCGGCCTTA+AGG 0.324096 1_1:-58647078 None:intergenic
AGCAGCTGCAGCGGCGGCGG+CGG 0.332062 1_1:-58643966 None:intergenic
GAAACTCAGGATTAGGTTTA+CGG 0.338040 1_1:-58643566 None:intergenic
ACAAGGAACATCAAGTTATT+GGG 0.338548 1_1:+58648486 Msa0031830:CDS
GCACCCGTTCAATAGGATAT+TGG 0.339582 1_1:+58645696 Msa0031830:intron
ACTTGATGTTCCTTGTTTCC+AGG 0.345183 1_1:-58648479 None:intergenic
GTTGTCCGAAACTCAGGATT+AGG 0.355193 1_1:-58643573 None:intergenic
CATTCTGATGGGCAGCTTGT+AGG 0.355364 1_1:+58647037 Msa0031830:CDS
TAAGGCCGCCAGTCCGGTTC+AGG 0.357551 1_1:+58647081 Msa0031830:CDS
TTGGTAATGGGCAGGATTTA+GGG 0.367789 1_1:-58643606 None:intergenic
CATTTCATGCCTCAGCAATA+TGG 0.378362 1_1:+58648515 Msa0031830:CDS
AACAACAATTTAATTTCTAA+AGG 0.379709 1_1:-58649023 None:intergenic
ATATTGGACGATTTGGTAAT+GGG 0.385659 1_1:-58643618 None:intergenic
TCGGGAGACTCGTACTTTCT+GGG 0.385982 1_1:-58643902 None:intergenic
GAATTCTGCATTTCTCTAGT+TGG 0.386689 1_1:+58649065 Msa0031830:three_prime_UTR
CACTTTGTTACTGTTGCTCC+TGG 0.393345 1_1:+58644227 Msa0031830:CDS
ACAACAATTTAATTTCTAAA+GGG 0.397323 1_1:-58649022 None:intergenic
CTACTTCCTATTACTTATGA+TGG 0.397617 1_1:+58648930 Msa0031830:three_prime_UTR
CAGGAATAGTTTCCATTCTC+AGG 0.403160 1_1:-58648764 None:intergenic
ACCCAAAAGCCATCTTAATC+AGG 0.406562 1_1:-58648783 None:intergenic
TATATTGGACGATTTGGTAA+TGG 0.406800 1_1:-58643619 None:intergenic
AGCAGCAGCTGCAGCGGCGG+CGG 0.409174 1_1:-58643969 None:intergenic
TACCTTTCCATCCCTCGGAT+TGG 0.412239 1_1:+58648549 Msa0031830:CDS
CCATTGGAAGAGCTAATTGC+TGG 0.415594 1_1:-58648446 None:intergenic
AACTGGCGATGGTAACTTGC+TGG 0.416551 1_1:-58648393 None:intergenic
TAATTCACACAGGTCATTGC+TGG 0.422282 1_1:+58648314 Msa0031830:intron
ACCCCTTAAGGCCGCCAGTC+CGG 0.424576 1_1:+58647075 Msa0031830:CDS
CACTTGATTGTTGTTGTTGG+TGG 0.426662 1_1:-58643768 None:intergenic
TCCATTTAGTACGGAGGGTA+TGG 0.428087 1_1:-58643740 None:intergenic
ATATTGCCTCCGGAGGTTGC+TGG 0.435352 1_1:-58645813 None:intergenic
TATGTCCGTAATGAACTTGA+TGG 0.435818 1_1:+58646983 Msa0031830:CDS
GGTCACTTGATTGTTGTTGT+TGG 0.437959 1_1:-58643771 None:intergenic
CCCTCCAAGGACCCTGGTGC+TGG 0.439848 1_1:+58648350 Msa0031830:CDS
TATACCAGCACCAGGGTCCT+TGG 0.442069 1_1:-58648354 None:intergenic
AATGAACTTGATGGTCGTTC+TGG 0.442458 1_1:+58646992 Msa0031830:CDS
TTTCTGTATGCAGGAAGAAC+AGG 0.442710 1_1:+58648722 Msa0031830:intron
GTGGTGGTTCCGTTACGTTC+AGG 0.444354 1_1:-58643830 None:intergenic
GAAACTATTCCTGATTAAGA+TGG 0.448462 1_1:+58648774 Msa0031830:exon
AAGCATTGCTGGACCCCTTA+AGG 0.450871 1_1:+58647063 Msa0031830:CDS
CTTCGTCAGCCAGCAACCTC+CGG 0.456813 1_1:+58645804 Msa0031830:CDS
TCTTCCGGCGATAGCTTCCT+CGG 0.461872 1_1:-58643921 None:intergenic
GCAAACCACTCTCCTGAGAA+TGG 0.462484 1_1:+58648752 Msa0031830:CDS
CTTGATGTTCCTTGTTTCCA+GGG 0.463729 1_1:-58648478 None:intergenic
AGAAATTACCTGAACCGGAC+TGG 0.467898 1_1:-58647089 None:intergenic
TTCTGCATTTCTCTAGTTGG+TGG 0.476687 1_1:+58649068 Msa0031830:three_prime_UTR
TCCAATGGGAATGCAATCCC+TGG 0.476707 1_1:+58648461 Msa0031830:CDS
AAGTTTCATTCCTCTTCTCT+AGG 0.489463 1_1:+58644049 Msa0031830:CDS
TACAAGCTGCCCATCAGAAT+GGG 0.493318 1_1:-58647035 None:intergenic
CTCGTAAGTAATATTGCCTC+CGG 0.494483 1_1:-58645823 None:intergenic
ACGTTCAGGAGTGACGTTAA+CGG 0.494853 1_1:-58643816 None:intergenic
CGGAAACCTAAATTTGATGC+TGG 0.496332 1_1:-58648422 None:intergenic
AAGGGTGTTGTCCGAAACTC+AGG 0.496739 1_1:-58643579 None:intergenic
TGAAGAATCTCTCTCTGAAA+GGG 0.501363 1_1:-58643713 None:intergenic
CGTAACGGAACCACCACTGA+TGG 0.501424 1_1:+58643836 Msa0031830:CDS
GTGGTGTCTTCCATTTAGTA+CGG 0.508965 1_1:-58643749 None:intergenic
AACGACCATCAAGTTCATTA+CGG 0.510329 1_1:-58646988 None:intergenic
TGGACGATTTGGTAATGGGC+AGG 0.513460 1_1:-58643614 None:intergenic
ACCGGACTGGCGGCCTTAAG+GGG 0.515369 1_1:-58647076 None:intergenic
AGAGAAGGAAACAATTTGAC+GGG 0.515949 1_1:-58643651 None:intergenic
CTTCTTCTTGTTCTCCGTAA+CGG 0.516854 1_1:-58643870 None:intergenic
TGTGGTACCTTTCCATCCCT+CGG 0.518399 1_1:+58648544 Msa0031830:CDS
ACGAAGAGTGGCACTAGAGA+TGG 0.519420 1_1:-58645787 None:intergenic
GTAAACCTAATCCTGAGTTT+CGG 0.522599 1_1:+58643568 Msa0031830:five_prime_UTR
AATGCTGGCTTTGAACTGAT+AGG 0.523767 1_1:+58648593 Msa0031830:CDS
TCTATTCCCTCCAAGGACCC+TGG 0.524766 1_1:+58648344 Msa0031830:CDS
CGTCCAGATTCAAGAAATGC+TGG 0.526609 1_1:+58648578 Msa0031830:CDS
ATTAGCAGCAGCTGCAGCGG+CGG 0.526951 1_1:-58643972 None:intergenic
ATGAAGAATCTCTCTCTGAA+AGG 0.527187 1_1:-58643714 None:intergenic
CCTTTCCATCCCTCGGATTG+GGG 0.528116 1_1:+58648551 Msa0031830:CDS
TGTTCTCCGTAACGGAGTGG+TGG 0.536009 1_1:-58643862 None:intergenic
CAGCAATTAGCTCTTCCAAT+GGG 0.536588 1_1:+58648447 Msa0031830:CDS
GTATGCTTATCCCATTCTGA+TGG 0.543430 1_1:+58647025 Msa0031830:CDS
AGCATTAGCAGCAGCTGCAG+CGG 0.546102 1_1:-58643975 None:intergenic
TCCAGGGATTGCATTCCCAT+TGG 0.546558 1_1:-58648462 None:intergenic
GACTTCCCCAATCCGAGGGA+TGG 0.548111 1_1:-58648556 None:intergenic
CTTCCGGCGATAGCTTCCTC+GGG 0.552890 1_1:-58643920 None:intergenic
CAAGGAACATCAAGTTATTG+GGG 0.553131 1_1:+58648487 Msa0031830:CDS
GAATGCAATCCCTGGAAACA+AGG 0.554762 1_1:+58648469 Msa0031830:CDS
CTACAAGCTGCCCATCAGAA+TGG 0.555148 1_1:-58647036 None:intergenic
GGAACAATGCATACCTCACC+AGG 0.558747 1_1:-58644245 None:intergenic
GTTGTGAAAAGATTAATCCT+TGG 0.565283 1_1:+58648804 Msa0031830:three_prime_UTR
GGTTGCTGGCTGACGAAGAG+TGG 0.567608 1_1:-58645799 None:intergenic
TCTGATGGGCAGCTTGTAGG+TGG 0.567676 1_1:+58647040 Msa0031830:CDS
CATTGGAAGAGCTAATTGCT+GGG 0.567874 1_1:-58648445 None:intergenic
CCAGCAATTAGCTCTTCCAA+TGG 0.568909 1_1:+58648446 Msa0031830:CDS
TGTTACTGTTGCTCCTGGTG+AGG 0.572795 1_1:+58644232 Msa0031830:CDS
ACCAGCACCAGGGTCCTTGG+AGG 0.573734 1_1:-58648351 None:intergenic
GTGTCTTCCATTTAGTACGG+AGG 0.577712 1_1:-58643746 None:intergenic
TAGAGAAGGAAACAATTTGA+CGG 0.582513 1_1:-58643652 None:intergenic
CCCCAATCCGAGGGATGGAA+AGG 0.586359 1_1:-58648551 None:intergenic
AGTTTCCATTCTCAGGAGAG+TGG 0.587387 1_1:-58648757 None:intergenic
GTTCTCCGTAACGGAGTGGT+GGG 0.592361 1_1:-58643861 None:intergenic
GAACTTGATGGTCGTTCTGG+TGG 0.596225 1_1:+58646995 Msa0031830:CDS
TACAATAAACCTAACTACCA+AGG 0.596463 1_1:-58648821 None:intergenic
TGGGTCCCACCACTCCGTTA+CGG 0.599982 1_1:+58643856 Msa0031830:CDS
AGAAAATACTAACTACTACA+AGG 0.603822 1_1:-58648847 None:intergenic
GTTGCAGGGAATTCAAGAGA+GGG 0.607598 1_1:+58644194 Msa0031830:intron
TGTCTTCCATTTAGTACGGA+GGG 0.609629 1_1:-58643745 None:intergenic
CCAGCACCAGGGTCCTTGGA+GGG 0.612340 1_1:-58648350 None:intergenic
AGAACAAGAAGAAGCGTGGT+AGG 0.613625 1_1:+58643879 Msa0031830:CDS
AAACGACGTCGTAGCGGTAG+CGG 0.614502 1_1:-58643999 None:intergenic
TGGACGACTTCCCCAATCCG+AGG 0.615460 1_1:-58648561 None:intergenic
TCTCCCGAGGAAGCTATCGC+CGG 0.615902 1_1:+58643917 Msa0031830:CDS
TATGCTTATCCCATTCTGAT+GGG 0.616942 1_1:+58647026 Msa0031830:CDS
CGTCAGCCAGCAACCTCCGG+AGG 0.621500 1_1:+58645807 Msa0031830:CDS
TCTTGTTCTCCGTAACGGAG+TGG 0.621881 1_1:-58643865 None:intergenic
GTAACGGAACCACCACTGAT+GGG 0.622072 1_1:+58643837 Msa0031830:CDS
CAGGAGCAACAGTAACAAAG+TGG 0.626344 1_1:-58644226 None:intergenic
GGAGTGGTGGGACCCATCAG+TGG 0.627305 1_1:-58643849 None:intergenic
GTGGTGGGACCCATCAGTGG+TGG 0.629625 1_1:-58643846 None:intergenic
CGGAGGCAATATTACTTACG+AGG 0.630093 1_1:+58645824 Msa0031830:CDS
TGTTGCAGGGAATTCAAGAG+AGG 0.636017 1_1:+58644193 Msa0031830:intron
GGACGACTTCCCCAATCCGA+GGG 0.637707 1_1:-58648560 None:intergenic
TATGCAGGAAGAACAGGTCA+CGG 0.642297 1_1:+58648728 Msa0031830:intron
ACATTTACACCATATTGCTG+AGG 0.652079 1_1:-58648524 None:intergenic
GCTGGTTCACTAACTGGCGA+TGG 0.653752 1_1:-58648404 None:intergenic
AGACGAAAACGACGTCGTAG+CGG 0.660124 1_1:-58644005 None:intergenic
GTAAGTAATATTGCCTCCGG+AGG 0.662135 1_1:-58645820 None:intergenic
AACGTCACTCCTGAACGTAA+CGG 0.666503 1_1:+58643821 Msa0031830:CDS
GAGAAGGAAACAATTTGACG+GGG 0.685467 1_1:-58643650 None:intergenic
ACGGAGAACAAGAAGAAGCG+TGG 0.691644 1_1:+58643875 Msa0031830:CDS
GCTTTGTTGCTCGAACAATG+AGG 0.693155 1_1:-58643792 None:intergenic
CAGAAAGTACGAGTCTCCCG+AGG 0.702575 1_1:+58643904 Msa0031830:CDS
AAGGAACATCAAGTTATTGG+GGG 0.703753 1_1:+58648488 Msa0031830:CDS
TCAGCAATATGGTGTAAATG+TGG 0.705545 1_1:+58648526 Msa0031830:CDS
AATTACCTGAACCGGACTGG+CGG 0.722108 1_1:-58647086 None:intergenic
AGAAGGAAACAATTTGACGG+GGG 0.740475 1_1:-58643649 None:intergenic
TGGAAGAGCTAATTGCTGGG+CGG 0.742767 1_1:-58648442 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATTAATAATTTTTTT+AGG - chr1_1:58643678-58643697 None:intergenic 0.0%
!! AAATTAGGTTAAAAAAAAAA+CGG - chr1_1:58644076-58644095 None:intergenic 10.0%
!!! TGTTCTAAAAATAAAAAATT+AGG - chr1_1:58644091-58644110 None:intergenic 10.0%
!! AAGAAAAAAAAGTAAATAAA+AGG - chr1_1:58644275-58644294 None:intergenic 10.0%
!!! TTTTTATTTTTTTTTGGATT+TGG + chr1_1:58645360-58645379 Msa0031830:intron 10.0%
!! AATATTTAATTAAAGTAAAG+AGG - chr1_1:58645998-58646017 None:intergenic 10.0%
!!! TATTTTTATTTTTGATATCA+GGG + chr1_1:58646929-58646948 Msa0031830:intron 10.0%
!! CTTATATAATATAATCATAA+TGG - chr1_1:58647668-58647687 None:intergenic 10.0%
!!! AAATTTTCGAAAAAGTTTAA+TGG + chr1_1:58644314-58644333 Msa0031830:intron 15.0%
!! GTAGATATAAAACTAATTTA+CGG - chr1_1:58644355-58644374 None:intergenic 15.0%
!! ATTATAAAATCAATATGACA+TGG - chr1_1:58644403-58644422 None:intergenic 15.0%
!!! TTCATATTGTTTGAATATTT+TGG + chr1_1:58645004-58645023 Msa0031830:intron 15.0%
!!! AATAGTTTTTGTATATGTAT+TGG + chr1_1:58645083-58645102 Msa0031830:intron 15.0%
!! ATTTAATAACATTAAGCAAA+CGG - chr1_1:58645630-58645649 None:intergenic 15.0%
!! CTTAATGTTATTAAATTTGT+CGG + chr1_1:58645634-58645653 Msa0031830:intron 15.0%
!!! CTATTTTTATTTTTGATATC+AGG + chr1_1:58646928-58646947 Msa0031830:intron 15.0%
!!! GTAATTTCTAAAAATTTATG+AGG + chr1_1:58647103-58647122 Msa0031830:intron 15.0%
!! ATATAATATAATCATAATGG+AGG - chr1_1:58647665-58647684 None:intergenic 15.0%
!!! AATTTTATTCATAGTTGATT+CGG - chr1_1:58647767-58647786 None:intergenic 15.0%
!! TAAGAATTATGACTATTTAA+AGG - chr1_1:58647832-58647851 None:intergenic 15.0%
!!! TCATAATTCTTATTTTGATA+AGG + chr1_1:58647840-58647859 Msa0031830:intron 15.0%
!! TGCAATTAATACATATATTT+GGG - chr1_1:58648173-58648192 None:intergenic 15.0%
!! TTGCAATTAATACATATATT+TGG - chr1_1:58648174-58648193 None:intergenic 15.0%
!! AGAATAAATACATGAAAAAT+AGG - chr1_1:58648238-58648257 None:intergenic 15.0%
!! CAAAAATAAAAAGAAATGTT+TGG - chr1_1:58648665-58648684 None:intergenic 15.0%
!!! ACAACAATTTAATTTCTAAA+GGG - chr1_1:58649025-58649044 None:intergenic 15.0%
!!! AACAACAATTTAATTTCTAA+AGG - chr1_1:58649026-58649045 None:intergenic 15.0%
!!! ATAATTTTTTTAGGTAGAGA+AGG - chr1_1:58643669-58643688 None:intergenic 20.0%
!!! TGACATGGAAATTTTTTTTA+GGG - chr1_1:58644388-58644407 None:intergenic 20.0%
!!! ATGACATGGAAATTTTTTTT+AGG - chr1_1:58644389-58644408 None:intergenic 20.0%
!!! AAAAAAAAAGTACATGTACT+TGG - chr1_1:58644469-58644488 None:intergenic 20.0%
!! TAAATATAGCAATAAAGTAC+AGG - chr1_1:58644608-58644627 None:intergenic 20.0%
!! GTACTTTATTGCTATATTTA+AGG + chr1_1:58644608-58644627 Msa0031830:intron 20.0%
!! TTTATTGCTATATTTAAGGA+CGG + chr1_1:58644612-58644631 Msa0031830:intron 20.0%
!!! GTAGAATAATTGATTTTCAT+TGG + chr1_1:58644665-58644684 Msa0031830:intron 20.0%
!!! TTTAAATCCGTTTTCAAATT+AGG + chr1_1:58644728-58644747 Msa0031830:intron 20.0%
!! AAAACTTCCTAATTTGAAAA+CGG - chr1_1:58644738-58644757 None:intergenic 20.0%
!!! TTTTCAAATTAGGAAGTTTT+TGG + chr1_1:58644738-58644757 Msa0031830:intron 20.0%
!! GTGTATTAATCAAAACATTT+GGG - chr1_1:58644801-58644820 None:intergenic 20.0%
!! CAAAAACTATTAATCTTAAG+AGG - chr1_1:58645074-58645093 None:intergenic 20.0%
!!! ATATGTATTGGTGTAAATAA+AGG + chr1_1:58645095-58645114 Msa0031830:intron 20.0%
!!! TAAAGAAGTGTATATCATAA+TGG - chr1_1:58645300-58645319 None:intergenic 20.0%
!! AATAAAACATAAATCACATG+AGG - chr1_1:58645868-58645887 None:intergenic 20.0%
!!! AAGATCATATTTTTACCTAA+GGG - chr1_1:58645940-58645959 None:intergenic 20.0%
!!! TAAGATCATATTTTTACCTA+AGG - chr1_1:58645941-58645960 None:intergenic 20.0%
!! CTGAGAAATAAGTAAATAAA+TGG - chr1_1:58646160-58646179 None:intergenic 20.0%
!!! AACATAGGATTTTAAATGTA+AGG + chr1_1:58646231-58646250 Msa0031830:intron 20.0%
!!! TATGGACACATTTTTTAAAA+AGG - chr1_1:58646429-58646448 None:intergenic 20.0%
!! TAGTCATAATAATCTACATA+TGG - chr1_1:58646447-58646466 None:intergenic 20.0%
!! ATATATGTCTAGTATGATTT+AGG - chr1_1:58647432-58647451 None:intergenic 20.0%
!!! AAGAAGTATCATTAGTAAAT+AGG - chr1_1:58647464-58647483 None:intergenic 20.0%
!!! ATTTTATTCATAGTTGATTC+GGG - chr1_1:58647766-58647785 None:intergenic 20.0%
!! TAACAAAAAAAATCTTATCC+AGG - chr1_1:58647899-58647918 None:intergenic 20.0%
!! TTCATATTGTAAATTATAGC+AGG - chr1_1:58648281-58648300 None:intergenic 20.0%
!! TTTACAATATGAAATCACTT+TGG + chr1_1:58648288-58648307 Msa0031830:intron 20.0%
!! TTACAATATGAAATCACTTT+GGG + chr1_1:58648289-58648308 Msa0031830:intron 20.0%
!!! TAAAAAGAAATGTTTGGTTT+GGG - chr1_1:58648659-58648678 None:intergenic 20.0%
!! ATAAAAAGAAATGTTTGGTT+TGG - chr1_1:58648660-58648679 None:intergenic 20.0%
!!! TTGTTTTGTGATGAAATATT+GGG + chr1_1:58649041-58649060 Msa0031830:three_prime_UTR 20.0%
!! GTATTTTATATTGGACGATT+TGG - chr1_1:58643628-58643647 None:intergenic 25.0%
!!! TTTTTAGGTTTGTTGAAGTT+AGG - chr1_1:58644031-58644050 None:intergenic 25.0%
! AAAAAGTAAATAAAAGGACC+AGG - chr1_1:58644269-58644288 None:intergenic 25.0%
!! ATTTTATAATGTACTCCATC+CGG + chr1_1:58644413-58644432 Msa0031830:intron 25.0%
!! TAAAAAAGTATGCATGTAGT+TGG + chr1_1:58644439-58644458 Msa0031830:intron 25.0%
!! AGAAAAGTACATGTATTTGA+TGG + chr1_1:58644570-58644589 Msa0031830:intron 25.0%
!! GAAAAGTACATGTATTTGAT+GGG + chr1_1:58644571-58644590 Msa0031830:intron 25.0%
!!! AATTGATTTTCATTGGATGT+TGG + chr1_1:58644672-58644691 Msa0031830:intron 25.0%
! CGTGTATTAATCAAAACATT+TGG - chr1_1:58644802-58644821 None:intergenic 25.0%
! ATCAAAATCTCTATCATAAG+TGG - chr1_1:58644898-58644917 None:intergenic 25.0%
!! CTTTCTTTTCATCTGTTATT+TGG + chr1_1:58645331-58645350 Msa0031830:intron 25.0%
!! TTTTCTTTAGCTGATGAATT+TGG + chr1_1:58645564-58645583 Msa0031830:intron 25.0%
! TTAATTAAAGTAAAGAGGAC+AGG - chr1_1:58645993-58646012 None:intergenic 25.0%
!!! GTCATCTTTAGTAGTTTTAT+TGG + chr1_1:58646081-58646100 Msa0031830:intron 25.0%
!!! ATCTTTAGTAGTTTTATTGG+AGG + chr1_1:58646084-58646103 Msa0031830:intron 25.0%
!!! TCTTTAGTAGTTTTATTGGA+GGG + chr1_1:58646085-58646104 Msa0031830:intron 25.0%
!! AAATAAATGGAAGACAGTTT+TGG - chr1_1:58646147-58646166 None:intergenic 25.0%
! ATAAAGCTGTAAGAAAACAT+AGG + chr1_1:58646180-58646199 Msa0031830:intron 25.0%
!! ATGTTTTCTTACAACTTTAC+TGG - chr1_1:58646216-58646235 None:intergenic 25.0%
! GTAAAGTTGTAAGAAAACAT+AGG + chr1_1:58646216-58646235 Msa0031830:intron 25.0%
!!! AATTTGTGTCTTTTGACTTA+AGG + chr1_1:58646481-58646500 Msa0031830:intron 25.0%
!!! ATTTGTGTCTTTTGACTTAA+GGG + chr1_1:58646482-58646501 Msa0031830:intron 25.0%
! TGAATTTACATTAACCTTCA+TGG + chr1_1:58646841-58646860 Msa0031830:intron 25.0%
! TTTGACATAATTTCACTTAC+TGG + chr1_1:58646956-58646975 Msa0031830:CDS 25.0%
!!! TTTTTAGAAATTACCTGAAC+CGG - chr1_1:58647097-58647116 None:intergenic 25.0%
! ACTATCAACATAAATAGGAT+TGG - chr1_1:58647349-58647368 None:intergenic 25.0%
! TGAACACTATCAACATAAAT+AGG - chr1_1:58647354-58647373 None:intergenic 25.0%
! AATTCAGTCATTTCTATGAA+TGG + chr1_1:58647374-58647393 Msa0031830:intron 25.0%
! ATTCAGTCATTTCTATGAAT+GGG + chr1_1:58647375-58647394 Msa0031830:intron 25.0%
! ATACCTTGTTGATATTCTAA+AGG + chr1_1:58647574-58647593 Msa0031830:intron 25.0%
! TACCTTGTTGATATTCTAAA+GGG + chr1_1:58647575-58647594 Msa0031830:intron 25.0%
! ATTTCAACAGATACAACATT+CGG + chr1_1:58647702-58647721 Msa0031830:intron 25.0%
!!! TTCTTATTTTGATAAGGATC+AGG + chr1_1:58647846-58647865 Msa0031830:intron 25.0%
!!! TCTTATTTTGATAAGGATCA+GGG + chr1_1:58647847-58647866 Msa0031830:intron 25.0%
!! ATATTTGGGTTCTACTTATT+AGG - chr1_1:58648159-58648178 None:intergenic 25.0%
! AGAAAATACTAACTACTACA+AGG - chr1_1:58648850-58648869 None:intergenic 25.0%
!! TCTTTTCCATCATAAGTAAT+AGG - chr1_1:58648939-58648958 None:intergenic 25.0%
!!! GTTGTTTTGTGATGAAATAT+TGG + chr1_1:58649040-58649059 Msa0031830:three_prime_UTR 25.0%
!! ATATTGGACGATTTGGTAAT+GGG - chr1_1:58643621-58643640 None:intergenic 30.0%
!! TATATTGGACGATTTGGTAA+TGG - chr1_1:58643622-58643641 None:intergenic 30.0%
TAGAGAAGGAAACAATTTGA+CGG - chr1_1:58643655-58643674 None:intergenic 30.0%
! GAAGAGGAATGAAACTTTTT+AGG - chr1_1:58644046-58644065 None:intergenic 30.0%
!!! TTTAATGTTTTTGCTGTTGC+AGG + chr1_1:58644179-58644198 Msa0031830:intron 30.0%
!!! TTAATGTTTTTGCTGTTGCA+GGG + chr1_1:58644180-58644199 Msa0031830:intron 30.0%
!!! TTCTTTTTTTTTGCTCGATC+TGG + chr1_1:58644290-58644309 Msa0031830:intron 30.0%
AAAACTAATTTACGGTGTGA+CGG - chr1_1:58644347-58644366 None:intergenic 30.0%
! TTGCTTATATTTGAGTTCAG+AGG + chr1_1:58644493-58644512 Msa0031830:intron 30.0%
! TGCTTATATTTGAGTTCAGA+GGG + chr1_1:58644494-58644513 Msa0031830:intron 30.0%
! TTACAAAAGGGCATGTATAT+TGG + chr1_1:58644523-58644542 Msa0031830:intron 30.0%
! ATTTGGGATTGCAATTATGA+TGG - chr1_1:58644785-58644804 None:intergenic 30.0%
AATCTCTATCATAAGTGGTA+CGG - chr1_1:58644893-58644912 None:intergenic 30.0%
!! AGAGATTTTGATAGAGATTC+AGG + chr1_1:58644906-58644925 Msa0031830:intron 30.0%
TATTTCCATATCTTCTAAGC+AGG - chr1_1:58644972-58644991 None:intergenic 30.0%
!!! TTGTAGAGTTTTAGACAAAG+GGG - chr1_1:58645196-58645215 None:intergenic 30.0%
!!! GTTGTAGAGTTTTAGACAAA+GGG - chr1_1:58645197-58645216 None:intergenic 30.0%
!!! AGTTGTAGAGTTTTAGACAA+AGG - chr1_1:58645198-58645217 None:intergenic 30.0%
TAGATAGATACAACTTGTGA+AGG - chr1_1:58645420-58645439 None:intergenic 30.0%
AAAAAAGAAGATCAAGAGAG+AGG + chr1_1:58645484-58645503 Msa0031830:intron 30.0%
TCAGCTAAAGAAAACCAATT+TGG - chr1_1:58645558-58645577 None:intergenic 30.0%
! GCATGAGCATCATAATATTT+TGG - chr1_1:58645722-58645741 None:intergenic 30.0%
TGCTCATGCAAAAAAATAGT+AGG + chr1_1:58645733-58645752 Msa0031830:CDS 30.0%
AAAATCCCATTTCCTTTAGA+AGG - chr1_1:58645913-58645932 None:intergenic 30.0%
! AGAGTATCAGAATAAAACAG+TGG + chr1_1:58645961-58645980 Msa0031830:intron 30.0%
! GAAGATTTTTCTCTTACTGT+TGG + chr1_1:58646027-58646046 Msa0031830:intron 30.0%
AGGCTAAAACTTGAAAAGTA+GGG - chr1_1:58646366-58646385 None:intergenic 30.0%
AAGGCTAAAACTTGAAAAGT+AGG - chr1_1:58646367-58646386 None:intergenic 30.0%
!!! TTTGTGTCTTTTGACTTAAG+GGG + chr1_1:58646483-58646502 Msa0031830:intron 30.0%
! ATTGTTACAGTGTTACTGTT+AGG + chr1_1:58646527-58646546 Msa0031830:intron 30.0%
! TGGCTAGTATGTCAAAATTT+TGG - chr1_1:58646575-58646594 None:intergenic 30.0%
TTGACATACTAGCCAATAAA+CGG + chr1_1:58646580-58646599 Msa0031830:intron 30.0%
! ATTAGTCTCATGTAAGTGTA+AGG + chr1_1:58646704-58646723 Msa0031830:intron 30.0%
! TCTTTTTCTTTTTCCACTTG+TGG + chr1_1:58646808-58646827 Msa0031830:intron 30.0%
CAATATACAAGCGTATGAAA+AGG - chr1_1:58646894-58646913 None:intergenic 30.0%
AGAAAACTGTAGTCTATAAG+TGG + chr1_1:58647259-58647278 Msa0031830:intron 30.0%
TTCAGTCATTTCTATGAATG+GGG + chr1_1:58647376-58647395 Msa0031830:intron 30.0%
AGATAGAAGGGCTAATTATT+TGG + chr1_1:58647537-58647556 Msa0031830:intron 30.0%
! AAGAACTTTTGGATTCAGTT+TGG - chr1_1:58647962-58647981 None:intergenic 30.0%
! AGTGCATTGTAAAGAACTTT+TGG - chr1_1:58647973-58647992 None:intergenic 30.0%
AAAGTTCTTTACAATGCACT+TGG + chr1_1:58647973-58647992 Msa0031830:intron 30.0%
TGGACATTTAAATTAGACAC+AGG + chr1_1:58647993-58648012 Msa0031830:intron 30.0%
TTTATCCTAAGATTGAACAC+AGG - chr1_1:58648067-58648086 None:intergenic 30.0%
AACAAGGAACATCAAGTTAT+TGG + chr1_1:58648485-58648504 Msa0031830:CDS 30.0%
ACAAGGAACATCAAGTTATT+GGG + chr1_1:58648486-58648505 Msa0031830:CDS 30.0%
GAAACTATTCCTGATTAAGA+TGG + chr1_1:58648774-58648793 Msa0031830:exon 30.0%
GTTGTGAAAAGATTAATCCT+TGG + chr1_1:58648804-58648823 Msa0031830:three_prime_UTR 30.0%
! AAGATTAATCCTTGGTAGTT+AGG + chr1_1:58648812-58648831 Msa0031830:three_prime_UTR 30.0%
TACAATAAACCTAACTACCA+AGG - chr1_1:58648824-58648843 None:intergenic 30.0%
! AGCATTTTTCATGCTACAAA+AGG - chr1_1:58648880-58648899 None:intergenic 30.0%
CTACTTCCTATTACTTATGA+TGG + chr1_1:58648930-58648949 Msa0031830:three_prime_UTR 30.0%
GTAAACCTAATCCTGAGTTT+CGG + chr1_1:58643568-58643587 Msa0031830:five_prime_UTR 35.0%
AGAGAAGGAAACAATTTGAC+GGG - chr1_1:58643654-58643673 None:intergenic 35.0%
! TGAAGAATCTCTCTCTGAAA+GGG - chr1_1:58643716-58643735 None:intergenic 35.0%
ATGAAGAATCTCTCTCTGAA+AGG - chr1_1:58643717-58643736 None:intergenic 35.0%
AAGTTTCATTCCTCTTCTCT+AGG + chr1_1:58644049-58644068 Msa0031830:CDS 35.0%
!!! CATGCATACTTTTTTACTGC+CGG - chr1_1:58644435-58644454 None:intergenic 35.0%
! AAAAGTATGCATGTAGTTGG+TGG + chr1_1:58644442-58644461 Msa0031830:intron 35.0%
AGAGGGAGTTAGTTACAAAA+GGG + chr1_1:58644511-58644530 Msa0031830:intron 35.0%
CATGTATATTGGAGGTAGAT+AGG + chr1_1:58644534-58644553 Msa0031830:intron 35.0%
AAGTACATGTATTTGATGGG+TGG + chr1_1:58644574-58644593 Msa0031830:intron 35.0%
AGCAATAAAGTACAGGTACT+TGG - chr1_1:58644601-58644620 None:intergenic 35.0%
TAACACCTGCTTAGAAGATA+TGG + chr1_1:58644964-58644983 Msa0031830:intron 35.0%
TCATATCTCATTGCTCATTC+AGG - chr1_1:58645228-58645247 None:intergenic 35.0%
TAGATACAACTTGTGAAGGA+GGG - chr1_1:58645416-58645435 None:intergenic 35.0%
ATAGATACAACTTGTGAAGG+AGG - chr1_1:58645417-58645436 None:intergenic 35.0%
AGGTAGACACAAATTTGAGA+AGG + chr1_1:58645504-58645523 Msa0031830:intron 35.0%
TAGACACAAATTTGAGAAGG+AGG + chr1_1:58645507-58645526 Msa0031830:intron 35.0%
AGACACAAATTTGAGAAGGA+GGG + chr1_1:58645508-58645527 Msa0031830:intron 35.0%
AAATTTGAGAAGGAGGGAAA+AGG + chr1_1:58645514-58645533 Msa0031830:intron 35.0%
TTGGCCAATATCCTATTGAA+CGG - chr1_1:58645703-58645722 None:intergenic 35.0%
! AGCAACCTTCTAAAGGAAAT+GGG + chr1_1:58645905-58645924 Msa0031830:intron 35.0%
!!! AGACAGTTTTGGAAGAGTAT+GGG - chr1_1:58646136-58646155 None:intergenic 35.0%
!!! AAGACAGTTTTGGAAGAGTA+TGG - chr1_1:58646137-58646156 None:intergenic 35.0%
!!! TTGTGTCTTTTGACTTAAGG+GGG + chr1_1:58646484-58646503 Msa0031830:intron 35.0%
!! AACCCATAGTAGGCTATTTT+GGG - chr1_1:58646738-58646757 None:intergenic 35.0%
! AAACCCATAGTAGGCTATTT+TGG - chr1_1:58646739-58646758 None:intergenic 35.0%
AAAATGGTCAAACCCATAGT+AGG - chr1_1:58646748-58646767 None:intergenic 35.0%
TTGTGGCATGGTCTAAAAAA+TGG - chr1_1:58646764-58646783 None:intergenic 35.0%
TGTTATCAAAGCTCACATTG+TGG - chr1_1:58646781-58646800 None:intergenic 35.0%
TTTAGCATGCTTTACCATGA+AGG - chr1_1:58646858-58646877 None:intergenic 35.0%
GCATGCTAAATGTTAAGAGT+TGG + chr1_1:58646868-58646887 Msa0031830:intron 35.0%
TATGTCCGTAATGAACTTGA+TGG + chr1_1:58646983-58647002 Msa0031830:CDS 35.0%
AACGACCATCAAGTTCATTA+CGG - chr1_1:58646991-58647010 None:intergenic 35.0%
TATGCTTATCCCATTCTGAT+GGG + chr1_1:58647026-58647045 Msa0031830:CDS 35.0%
!! GAGTTGATAGAGACAAAAGA+AGG - chr1_1:58647150-58647169 None:intergenic 35.0%
ATCTAATTTCTACCGCAAAG+AGG - chr1_1:58647521-58647540 None:intergenic 35.0%
TGCGGTAGAAATTAGATAGA+AGG + chr1_1:58647524-58647543 Msa0031830:intron 35.0%
GCGGTAGAAATTAGATAGAA+GGG + chr1_1:58647525-58647544 Msa0031830:intron 35.0%
!! GACCCTTTAGAATATCAACA+AGG - chr1_1:58647580-58647599 None:intergenic 35.0%
ATTTAATACATTTCCCTGCC+TGG + chr1_1:58647629-58647648 Msa0031830:intron 35.0%
!! AGCTTGGTCATCTCTTATTT+TGG + chr1_1:58647871-58647890 Msa0031830:intron 35.0%
!!! GCTTGGTCATCTCTTATTTT+GGG + chr1_1:58647872-58647891 Msa0031830:intron 35.0%
AGTTTGGAGATACATTGAAG+GGG - chr1_1:58647946-58647965 None:intergenic 35.0%
CAGTTTGGAGATACATTGAA+GGG - chr1_1:58647947-58647966 None:intergenic 35.0%
TCAGTTTGGAGATACATTGA+AGG - chr1_1:58647948-58647967 None:intergenic 35.0%
! ACTTTGGGTTTAATTCACAC+AGG + chr1_1:58648304-58648323 Msa0031830:intron 35.0%
AGTGAACCAGCATCAAATTT+AGG + chr1_1:58648416-58648435 Msa0031830:CDS 35.0%
CAAGGAACATCAAGTTATTG+GGG + chr1_1:58648487-58648506 Msa0031830:CDS 35.0%
AAGGAACATCAAGTTATTGG+GGG + chr1_1:58648488-58648507 Msa0031830:CDS 35.0%
ACATTTACACCATATTGCTG+AGG - chr1_1:58648527-58648546 None:intergenic 35.0%
TCAGCAATATGGTGTAAATG+TGG + chr1_1:58648526-58648545 Msa0031830:CDS 35.0%
!! AATGTTTGGTTTGGGATGAA+GGG - chr1_1:58648651-58648670 None:intergenic 35.0%
!! AAATGTTTGGTTTGGGATGA+AGG - chr1_1:58648652-58648671 None:intergenic 35.0%
! GAATGATGTTTTCTGTATGC+AGG + chr1_1:58648713-58648732 Msa0031830:intron 35.0%
! TTCCTGATTAAGATGGCTTT+TGG + chr1_1:58648781-58648800 Msa0031830:exon 35.0%
! TCCTGATTAAGATGGCTTTT+GGG + chr1_1:58648782-58648801 Msa0031830:exon 35.0%
!! AGCTCTAGAGCTGATATTTA+AGG - chr1_1:58648910-58648929 None:intergenic 35.0%
GAATTCTGCATTTCTCTAGT+TGG + chr1_1:58649065-58649084 Msa0031830:three_prime_UTR 35.0%
!! GGCAGGATTTAGGGTTTTAA+GGG - chr1_1:58643600-58643619 None:intergenic 40.0%
!! TTGGTAATGGGCAGGATTTA+GGG - chr1_1:58643609-58643628 None:intergenic 40.0%
!! TTTGGTAATGGGCAGGATTT+AGG - chr1_1:58643610-58643629 None:intergenic 40.0%
!!! GACGGGGGAGTATTTTATAT+TGG - chr1_1:58643637-58643656 None:intergenic 40.0%
AGAAGGAAACAATTTGACGG+GGG - chr1_1:58643652-58643671 None:intergenic 40.0%
GAGAAGGAAACAATTTGACG+GGG - chr1_1:58643653-58643672 None:intergenic 40.0%
TGTCTTCCATTTAGTACGGA+GGG - chr1_1:58643748-58643767 None:intergenic 40.0%
GTGGTGTCTTCCATTTAGTA+CGG - chr1_1:58643752-58643771 None:intergenic 40.0%
! CACTTGATTGTTGTTGTTGG+TGG - chr1_1:58643771-58643790 None:intergenic 40.0%
! GGTCACTTGATTGTTGTTGT+TGG - chr1_1:58643774-58643793 None:intergenic 40.0%
CTTCTTCTTGTTCTCCGTAA+CGG - chr1_1:58643873-58643892 None:intergenic 40.0%
AAAAAACGGACCTAGAGAAG+AGG - chr1_1:58644062-58644081 None:intergenic 40.0%
!!! CATACTTTTTTACTGCCGGA+TGG - chr1_1:58644431-58644450 None:intergenic 40.0%
CAGAGGGAGTTAGTTACAAA+AGG + chr1_1:58644510-58644529 Msa0031830:intron 40.0%
! CAAAAGGGCATGTATATTGG+AGG + chr1_1:58644526-58644545 Msa0031830:intron 40.0%
AGCGAGTAGTTATATGAGTG+AGG + chr1_1:58644635-58644654 Msa0031830:intron 40.0%
AATGAGGAGAGGATCCAAAT+TGG + chr1_1:58645541-58645560 Msa0031830:intron 40.0%
AACGGGTGCAGAAACAATTA+GGG - chr1_1:58645685-58645704 None:intergenic 40.0%
TGGCCAATATCCTATTGAAC+GGG - chr1_1:58645702-58645721 None:intergenic 40.0%
CTCGTAAGTAATATTGCCTC+CGG - chr1_1:58645826-58645845 None:intergenic 40.0%
TACTTCCAGCAACCTTCTAA+AGG + chr1_1:58645898-58645917 Msa0031830:intron 40.0%
! CATTTCCTTTAGAAGGTTGC+TGG - chr1_1:58645906-58645925 None:intergenic 40.0%
! CAGCAACCTTCTAAAGGAAA+TGG + chr1_1:58645904-58645923 Msa0031830:intron 40.0%
! AATGGGATTTTACTGCCCTT+AGG + chr1_1:58645922-58645941 Msa0031830:intron 40.0%
!!! GACAGTTTTGGAAGAGTATG+GGG - chr1_1:58646135-58646154 None:intergenic 40.0%
CAATTTCAACCACTGTGTGA+AGG - chr1_1:58646511-58646530 None:intergenic 40.0%
! GTTACAGTGTTACTGTTAGG+CGG + chr1_1:58646530-58646549 Msa0031830:intron 40.0%
CTCCCAAAATAGCCTACTAT+GGG + chr1_1:58646733-58646752 Msa0031830:intron 40.0%
TCATTAGACTCATCCACAAG+TGG - chr1_1:58646824-58646843 None:intergenic 40.0%
! AATGAACTTGATGGTCGTTC+TGG + chr1_1:58646992-58647011 Msa0031830:CDS 40.0%
GTATGCTTATCCCATTCTGA+TGG + chr1_1:58647025-58647044 Msa0031830:CDS 40.0%
AAAAGAAGGAAGCAAGACAC+AGG - chr1_1:58647136-58647155 None:intergenic 40.0%
AATGGAGGTAAAGATTCACC+AGG - chr1_1:58647650-58647669 None:intergenic 40.0%
!! CATAGTTGATTCGGGTAACT+GGG - chr1_1:58647758-58647777 None:intergenic 40.0%
!! TCATAGTTGATTCGGGTAAC+TGG - chr1_1:58647759-58647778 None:intergenic 40.0%
!!! TCATCTCTTATTTTGGGACC+TGG + chr1_1:58647878-58647897 Msa0031830:intron 40.0%
GAAGGGGTAGAAATTTAGAG+AGG - chr1_1:58647930-58647949 None:intergenic 40.0%
! GAGTACGTTAGTTTGAGTGT+AGG + chr1_1:58648015-58648034 Msa0031830:intron 40.0%
ACTTGAATCCCCTAAACATG+TGG + chr1_1:58648040-58648059 Msa0031830:intron 40.0%
AACACAGGACCACATGTTTA+GGG - chr1_1:58648052-58648071 None:intergenic 40.0%
TAATTCACACAGGTCATTGC+TGG + chr1_1:58648314-58648333 Msa0031830:intron 40.0%
! CACATTTTCTATTCCCTCCA+AGG + chr1_1:58648337-58648356 Msa0031830:CDS 40.0%
!! TTTGATGCTGGTTCACTAAC+TGG - chr1_1:58648413-58648432 None:intergenic 40.0%
CGGAAACCTAAATTTGATGC+TGG - chr1_1:58648425-58648444 None:intergenic 40.0%
CATTGGAAGAGCTAATTGCT+GGG - chr1_1:58648448-58648467 None:intergenic 40.0%
! CAGCAATTAGCTCTTCCAAT+GGG + chr1_1:58648447-58648466 Msa0031830:CDS 40.0%
! CTTGATGTTCCTTGTTTCCA+GGG - chr1_1:58648481-58648500 None:intergenic 40.0%
! ACTTGATGTTCCTTGTTTCC+AGG - chr1_1:58648482-58648501 None:intergenic 40.0%
CATTTCATGCCTCAGCAATA+TGG + chr1_1:58648515-58648534 Msa0031830:CDS 40.0%
AAGCCAGCATTTCTTGAATC+TGG - chr1_1:58648584-58648603 None:intergenic 40.0%
!! AATGCTGGCTTTGAACTGAT+AGG + chr1_1:58648593-58648612 Msa0031830:CDS 40.0%
CTGATAGGTATGAACTTTCG+TGG + chr1_1:58648608-58648627 Msa0031830:intron 40.0%
!! ATGTTTGGTTTGGGATGAAG+GGG - chr1_1:58648650-58648669 None:intergenic 40.0%
TTTCTGTATGCAGGAAGAAC+AGG + chr1_1:58648722-58648741 Msa0031830:intron 40.0%
CAGGAATAGTTTCCATTCTC+AGG - chr1_1:58648767-58648786 None:intergenic 40.0%
ACCCAAAAGCCATCTTAATC+AGG - chr1_1:58648786-58648805 None:intergenic 40.0%
TTCTGCATTTCTCTAGTTGG+TGG + chr1_1:58649068-58649087 Msa0031830:three_prime_UTR 40.0%
GTTGTCCGAAACTCAGGATT+AGG - chr1_1:58643576-58643595 None:intergenic 45.0%
!! GGGCAGGATTTAGGGTTTTA+AGG - chr1_1:58643601-58643620 None:intergenic 45.0%
TCCATACCCTCCGTACTAAA+TGG + chr1_1:58643739-58643758 Msa0031830:exon 45.0%
TCCATTTAGTACGGAGGGTA+TGG - chr1_1:58643743-58643762 None:intergenic 45.0%
GTGTCTTCCATTTAGTACGG+AGG - chr1_1:58643749-58643768 None:intergenic 45.0%
! GCTTTGTTGCTCGAACAATG+AGG - chr1_1:58643795-58643814 None:intergenic 45.0%
ACGTTCAGGAGTGACGTTAA+CGG - chr1_1:58643819-58643838 None:intergenic 45.0%
AACGTCACTCCTGAACGTAA+CGG + chr1_1:58643821-58643840 Msa0031830:CDS 45.0%
! AGAACAAGAAGAAGCGTGGT+AGG + chr1_1:58643879-58643898 Msa0031830:CDS 45.0%
TGTTGCAGGGAATTCAAGAG+AGG + chr1_1:58644193-58644212 Msa0031830:intron 45.0%
GTTGCAGGGAATTCAAGAGA+GGG + chr1_1:58644194-58644213 Msa0031830:intron 45.0%
CAGGAGCAACAGTAACAAAG+TGG - chr1_1:58644229-58644248 None:intergenic 45.0%
CACTTTGTTACTGTTGCTCC+TGG + chr1_1:58644227-58644246 Msa0031830:CDS 45.0%
GTTATATGAGTGAGGCGATG+TGG + chr1_1:58644643-58644662 Msa0031830:intron 45.0%
GATGGTAAACGAATGAGCTC+AGG - chr1_1:58644767-58644786 None:intergenic 45.0%
GATTCAGGTGAGACACAACA+CGG + chr1_1:58644921-58644940 Msa0031830:intron 45.0%
ATTCAGGTGAGACACAACAC+GGG + chr1_1:58644922-58644941 Msa0031830:intron 45.0%
AGAAGGAGAGAATGAGGGTA+AGG - chr1_1:58645393-58645412 None:intergenic 45.0%
GAAAAGGAGAGAATGAGGAG+AGG + chr1_1:58645530-58645549 Msa0031830:intron 45.0%
GAACGGGTGCAGAAACAATT+AGG - chr1_1:58645686-58645705 None:intergenic 45.0%
! TGTTTCTGCACCCGTTCAAT+AGG + chr1_1:58645689-58645708 Msa0031830:intron 45.0%
GCACCCGTTCAATAGGATAT+TGG + chr1_1:58645696-58645715 Msa0031830:intron 45.0%
ATGTGCATTCTGTCTGCTTC+TGG + chr1_1:58645762-58645781 Msa0031830:CDS 45.0%
GTAAGTAATATTGCCTCCGG+AGG - chr1_1:58645823-58645842 None:intergenic 45.0%
CGGAGGCAATATTACTTACG+AGG + chr1_1:58645824-58645843 Msa0031830:CDS 45.0%
! TGGTGGTGATTGAAGACTGA+AGG - chr1_1:58646386-58646405 None:intergenic 45.0%
CCAGCAGTGCTGTCAAATAT+CGG - chr1_1:58646654-58646673 None:intergenic 45.0%
TATTTGACAGCACTGCTGGT+AGG + chr1_1:58646655-58646674 Msa0031830:intron 45.0%
TGCTGGTAGGTCAGTAGTTT+GGG + chr1_1:58646668-58646687 Msa0031830:intron 45.0%
!! CCATAGTAGGCTATTTTGGG+AGG - chr1_1:58646735-58646754 None:intergenic 45.0%
CCTCCCAAAATAGCCTACTA+TGG + chr1_1:58646732-58646751 Msa0031830:intron 45.0%
TCAAAGCTCACATTGTGGCA+TGG - chr1_1:58646776-58646795 None:intergenic 45.0%
TACAAGCTGCCCATCAGAAT+GGG - chr1_1:58647038-58647057 None:intergenic 45.0%
AGAAATTACCTGAACCGGAC+TGG - chr1_1:58647092-58647111 None:intergenic 45.0%
TGACTGAAACGTCCTCTTTG+CGG + chr1_1:58647506-58647525 Msa0031830:intron 45.0%
AGGTAAAGATTCACCAGGCA+GGG - chr1_1:58647645-58647664 None:intergenic 45.0%
ACACAGGACCACATGTTTAG+GGG - chr1_1:58648051-58648070 None:intergenic 45.0%
GAACACAGGACCACATGTTT+AGG - chr1_1:58648053-58648072 None:intergenic 45.0%
GTGGTCCTGTGTTCAATCTT+AGG + chr1_1:58648059-58648078 Msa0031830:intron 45.0%
! CACCTTTTATACCAGCACCA+GGG - chr1_1:58648364-58648383 None:intergenic 45.0%
! TCACCTTTTATACCAGCACC+AGG - chr1_1:58648365-58648384 None:intergenic 45.0%
CCATTGGAAGAGCTAATTGC+TGG - chr1_1:58648449-58648468 None:intergenic 45.0%
! CCAGCAATTAGCTCTTCCAA+TGG + chr1_1:58648446-58648465 Msa0031830:CDS 45.0%
GAATGCAATCCCTGGAAACA+AGG + chr1_1:58648469-58648488 Msa0031830:CDS 45.0%
CGTCCAGATTCAAGAAATGC+TGG + chr1_1:58648578-58648597 Msa0031830:CDS 45.0%
TATGCAGGAAGAACAGGTCA+CGG + chr1_1:58648728-58648747 Msa0031830:intron 45.0%
AGTTTCCATTCTCAGGAGAG+TGG - chr1_1:58648760-58648779 None:intergenic 45.0%
!!! ACATTTTTTTTATTTTTTTT+TGG + chr1_1:58645354-58645373 Msa0031830:intron 5.0%
!! AAGGGTGTTGTCCGAAACTC+AGG - chr1_1:58643582-58643601 None:intergenic 50.0%
!! TGGACGATTTGGTAATGGGC+AGG - chr1_1:58643617-58643636 None:intergenic 50.0%
! GTAACGGAACCACCACTGAT+GGG + chr1_1:58643837-58643856 Msa0031830:CDS 50.0%
! TCTTGTTCTCCGTAACGGAG+TGG - chr1_1:58643868-58643887 None:intergenic 50.0%
ACGGAGAACAAGAAGAAGCG+TGG + chr1_1:58643875-58643894 Msa0031830:CDS 50.0%
TCGGGAGACTCGTACTTTCT+GGG - chr1_1:58643905-58643924 None:intergenic 50.0%
AGACGAAAACGACGTCGTAG+CGG - chr1_1:58644008-58644027 None:intergenic 50.0%
TGTTACTGTTGCTCCTGGTG+AGG + chr1_1:58644232-58644251 Msa0031830:CDS 50.0%
GGAACAATGCATACCTCACC+AGG - chr1_1:58644248-58644267 None:intergenic 50.0%
GGTGAGGTATGCATTGTTCC+TGG + chr1_1:58644248-58644267 Msa0031830:intron 50.0%
GAGAGAATGAGGGTAAGGAG+AGG - chr1_1:58645388-58645407 None:intergenic 50.0%
GAGGGAGAAGGAGAGAATGA+GGG - chr1_1:58645398-58645417 None:intergenic 50.0%
CAACTTGTGAAGGAGGGAGA+AGG - chr1_1:58645410-58645429 None:intergenic 50.0%
GGAGGGAAAAGGAGAGAATG+AGG + chr1_1:58645525-58645544 Msa0031830:intron 50.0%
ACGAAGAGTGGCACTAGAGA+TGG - chr1_1:58645790-58645809 None:intergenic 50.0%
!! CTGTTAGGCGGTGTTGTCAA+TGG + chr1_1:58646542-58646561 Msa0031830:intron 50.0%
!! TTAGGCGGTGTTGTCAATGG+CGG + chr1_1:58646545-58646564 Msa0031830:intron 50.0%
CATGGCCAATTCGTGAAGGA+TGG - chr1_1:58646619-58646638 None:intergenic 50.0%
CATCCTTCACGAATTGGCCA+TGG + chr1_1:58646617-58646636 Msa0031830:intron 50.0%
GTGCTGTCAAATATCGGCCA+CGG - chr1_1:58646648-58646667 None:intergenic 50.0%
CCGATATTTGACAGCACTGC+TGG + chr1_1:58646651-58646670 Msa0031830:intron 50.0%
CTGCTGGTAGGTCAGTAGTT+TGG + chr1_1:58646667-58646686 Msa0031830:intron 50.0%
! GAACTTGATGGTCGTTCTGG+TGG + chr1_1:58646995-58647014 Msa0031830:CDS 50.0%
CTACAAGCTGCCCATCAGAA+TGG - chr1_1:58647039-58647058 None:intergenic 50.0%
! CATTCTGATGGGCAGCTTGT+AGG + chr1_1:58647037-58647056 Msa0031830:CDS 50.0%
!! CTTGTAGGTGGAAGCATTGC+TGG + chr1_1:58647052-58647071 Msa0031830:CDS 50.0%
! AAGCATTGCTGGACCCCTTA+AGG + chr1_1:58647063-58647082 Msa0031830:CDS 50.0%
! AATTACCTGAACCGGACTGG+CGG - chr1_1:58647089-58647108 None:intergenic 50.0%
GAGGTAAAGATTCACCAGGC+AGG - chr1_1:58647646-58647665 None:intergenic 50.0%
TGATAAGGATCAGGGCAGCT+TGG + chr1_1:58647855-58647874 Msa0031830:intron 50.0%
!! GACCCTGGTGCTGGTATAAA+AGG + chr1_1:58648359-58648378 Msa0031830:CDS 50.0%
! AACTGGCGATGGTAACTTGC+TGG - chr1_1:58648396-58648415 None:intergenic 50.0%
TGGAAGAGCTAATTGCTGGG+CGG - chr1_1:58648445-58648464 None:intergenic 50.0%
TCCAATGGGAATGCAATCCC+TGG + chr1_1:58648461-58648480 Msa0031830:CDS 50.0%
TCCAGGGATTGCATTCCCAT+TGG - chr1_1:58648465-58648484 None:intergenic 50.0%
GCAAACCACTCTCCTGAGAA+TGG + chr1_1:58648752-58648771 Msa0031830:CDS 50.0%
GTGGTGGTTCCGTTACGTTC+AGG - chr1_1:58643833-58643852 None:intergenic 55.0%
! CGTAACGGAACCACCACTGA+TGG + chr1_1:58643836-58643855 Msa0031830:CDS 55.0%
! GTTCTCCGTAACGGAGTGGT+GGG - chr1_1:58643864-58643883 None:intergenic 55.0%
! TGTTCTCCGTAACGGAGTGG+TGG - chr1_1:58643865-58643884 None:intergenic 55.0%
CTCGGGAGACTCGTACTTTC+TGG - chr1_1:58643906-58643925 None:intergenic 55.0%
! CAGAAAGTACGAGTCTCCCG+AGG + chr1_1:58643904-58643923 Msa0031830:CDS 55.0%
TCTTCCGGCGATAGCTTCCT+CGG - chr1_1:58643924-58643943 None:intergenic 55.0%
! AGCGGCGATGGCTTTTCTTC+CGG - chr1_1:58643939-58643958 None:intergenic 55.0%
AGCATTAGCAGCAGCTGCAG+CGG - chr1_1:58643978-58643997 None:intergenic 55.0%
AAACGACGTCGTAGCGGTAG+CGG - chr1_1:58644002-58644021 None:intergenic 55.0%
GGAGGGAGAAGGAGAGAATG+AGG - chr1_1:58645399-58645418 None:intergenic 55.0%
ATATTGCCTCCGGAGGTTGC+TGG - chr1_1:58645816-58645835 None:intergenic 55.0%
AACCTCTGCGTTTGCGCTCT+TGG - chr1_1:58646406-58646425 None:intergenic 55.0%
TAAGGGGGACCTTCACACAG+TGG + chr1_1:58646499-58646518 Msa0031830:intron 55.0%
CTAGCCAATAAACGGCGCTG+TGG + chr1_1:58646588-58646607 Msa0031830:intron 55.0%
TGCCGCCATCCTTCACGAAT+TGG + chr1_1:58646611-58646630 Msa0031830:intron 55.0%
GGCCAATTCGTGAAGGATGG+CGG - chr1_1:58646616-58646635 None:intergenic 55.0%
GCACCATGGCCAATTCGTGA+AGG - chr1_1:58646623-58646642 None:intergenic 55.0%
CTGTCAAATATCGGCCACGG+CGG - chr1_1:58646645-58646664 None:intergenic 55.0%
! TCTGATGGGCAGCTTGTAGG+TGG + chr1_1:58647040-58647059 Msa0031830:CDS 55.0%
TCTATTCCCTCCAAGGACCC+TGG + chr1_1:58648344-58648363 Msa0031830:CDS 55.0%
TATACCAGCACCAGGGTCCT+TGG - chr1_1:58648357-58648376 None:intergenic 55.0%
! GCTGGTTCACTAACTGGCGA+TGG - chr1_1:58648407-58648426 None:intergenic 55.0%
! GGTTTGGGATGAAGGGGTGA+TGG - chr1_1:58648644-58648663 None:intergenic 55.0%
TGGGTCCCACCACTCCGTTA+CGG + chr1_1:58643856-58643875 Msa0031830:CDS 60.0%
TCTCCCGAGGAAGCTATCGC+CGG + chr1_1:58643917-58643936 Msa0031830:CDS 60.0%
CTTCCGGCGATAGCTTCCTC+GGG - chr1_1:58643923-58643942 None:intergenic 60.0%
ATTAGCAGCAGCTGCAGCGG+CGG - chr1_1:58643975-58643994 None:intergenic 60.0%
! GGTTGCTGGCTGACGAAGAG+TGG - chr1_1:58645802-58645821 None:intergenic 60.0%
CTTCGTCAGCCAGCAACCTC+CGG + chr1_1:58645804-58645823 Msa0031830:CDS 60.0%
CTCTGCGTTTGCGCTCTTGG+TGG - chr1_1:58646403-58646422 None:intergenic 60.0%
! CACCAAGAGCGCAAACGCAG+AGG + chr1_1:58646401-58646420 Msa0031830:intron 60.0%
GGCACCACAGCGCCGTTTAT+TGG - chr1_1:58646595-58646614 None:intergenic 60.0%
!! AACCGGACTGGCGGCCTTAA+GGG - chr1_1:58647080-58647099 None:intergenic 60.0%
! GTGGTGGGACCCATCAGTGG+TGG - chr1_1:58643849-58643868 None:intergenic 65.0%
! GGAGTGGTGGGACCCATCAG+TGG - chr1_1:58643852-58643871 None:intergenic 65.0%
!! GGCGGCTTTTCTAGCGGCGA+TGG - chr1_1:58643951-58643970 None:intergenic 65.0%
!! AATTGGCCATGGTGCCGCCG+TGG + chr1_1:58646628-58646647 Msa0031830:intron 65.0%
ACCCCTTAAGGCCGCCAGTC+CGG + chr1_1:58647075-58647094 Msa0031830:CDS 65.0%
!! ACCGGACTGGCGGCCTTAAG+GGG - chr1_1:58647079-58647098 None:intergenic 65.0%
!! GAACCGGACTGGCGGCCTTA+AGG - chr1_1:58647081-58647100 None:intergenic 65.0%
TAAGGCCGCCAGTCCGGTTC+AGG + chr1_1:58647081-58647100 Msa0031830:CDS 65.0%
CCAGCACCAGGGTCCTTGGA+GGG - chr1_1:58648353-58648372 None:intergenic 65.0%
ACCAGCACCAGGGTCCTTGG+AGG - chr1_1:58648354-58648373 None:intergenic 65.0%
! GGCGGCGGCGGCTTTTCTAG+CGG - chr1_1:58643957-58643976 None:intergenic 70.0%
CGTCAGCCAGCAACCTCCGG+AGG + chr1_1:58645807-58645826 Msa0031830:CDS 70.0%
TATCGGCCACGGCGGCACCA+TGG - chr1_1:58646637-58646656 None:intergenic 70.0%
CCCTCCAAGGACCCTGGTGC+TGG + chr1_1:58648350-58648369 Msa0031830:CDS 70.0%
AGCAGCAGCTGCAGCGGCGG+CGG - chr1_1:58643972-58643991 None:intergenic 75.0%
! AGCAGCTGCAGCGGCGGCGG+CGG - chr1_1:58643969-58643988 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 58643567 58649103 58643567 ID=Msa0031830;Name=Msa0031830
chr1_1 mRNA 58643567 58649103 58643567 ID=Msa0031830-mRNA-1;Parent=Msa0031830;Name=Msa0031830-mRNA-1;_AED=0.06;_eAED=0.06;_QI=191|1|1|1|1|1|6|316|331
chr1_1 exon 58643567 58644070 58643567 ID=Msa0031830-mRNA-1:exon:17945;Parent=Msa0031830-mRNA-1
chr1_1 exon 58644201 58644253 58644201 ID=Msa0031830-mRNA-1:exon:17946;Parent=Msa0031830-mRNA-1
chr1_1 exon 58645711 58645845 58645711 ID=Msa0031830-mRNA-1:exon:17947;Parent=Msa0031830-mRNA-1
chr1_1 exon 58646950 58647102 58646950 ID=Msa0031830-mRNA-1:exon:17948;Parent=Msa0031830-mRNA-1
chr1_1 exon 58648326 58648614 58648326 ID=Msa0031830-mRNA-1:exon:17949;Parent=Msa0031830-mRNA-1
chr1_1 exon 58648735 58649103 58648735 ID=Msa0031830-mRNA-1:exon:17950;Parent=Msa0031830-mRNA-1
chr1_1 five_prime_UTR 58643567 58643757 58643567 ID=Msa0031830-mRNA-1:five_prime_utr;Parent=Msa0031830-mRNA-1
chr1_1 CDS 58643758 58644070 58643758 ID=Msa0031830-mRNA-1:cds;Parent=Msa0031830-mRNA-1
chr1_1 CDS 58644201 58644253 58644201 ID=Msa0031830-mRNA-1:cds;Parent=Msa0031830-mRNA-1
chr1_1 CDS 58645711 58645845 58645711 ID=Msa0031830-mRNA-1:cds;Parent=Msa0031830-mRNA-1
chr1_1 CDS 58646950 58647102 58646950 ID=Msa0031830-mRNA-1:cds;Parent=Msa0031830-mRNA-1
chr1_1 CDS 58648326 58648614 58648326 ID=Msa0031830-mRNA-1:cds;Parent=Msa0031830-mRNA-1
chr1_1 CDS 58648735 58648787 58648735 ID=Msa0031830-mRNA-1:cds;Parent=Msa0031830-mRNA-1
chr1_1 three_prime_UTR 58648788 58649103 58648788 ID=Msa0031830-mRNA-1:three_prime_utr;Parent=Msa0031830-mRNA-1
Gene Sequence

>Msa0031830

ATGGAAGACACCACCAACAACAACAATCAAGTGACCTCATTGTTCGAGCAACAAAGCACCGTTAACGTCACTCCTGAACGTAACGGAACCACCACTGATGGGTCCCACCACTCCGTTACGGAGAACAAGAAGAAGCGTGGTAGGCCCAGAAAGTACGAGTCTCCCGAGGAAGCTATCGCCGGAAGAAAAGCCATCGCCGCTAGAAAAGCCGCCGCCGCCGCTGCAGCTGCTGCTAATGCTACCGCTACCGCTACGACGTCGTTTTCGTCTCCTAACTTCAACAAACCTAAAAAGTTTCATTCCTCTTCTCTAGGGAATTCAAGAGAGGGTTTCAATATCCACTTTGTTACTGTTGCTCCTGGTGAGGATATTGGCCAAAATATTATGATGCTCATGCAAAAAAATAGTAGGTGTGAGATGTGCATTCTGTCTGCTTCTGGTTCCATCTCTAGTGCCACTCTTCGTCAGCCAGCAACCTCCGGAGGCAATATTACTTACGAGGGTCGCTTTGACATAATTTCACTTACTGGATCATATGTCCGTAATGAACTTGATGGTCGTTCTGGTGGTCTCAGTGTATGCTTATCCCATTCTGATGGGCAGCTTGTAGGTGGAAGCATTGCTGGACCCCTTAAGGCCGCCAGTCCGGTTCAGGTCATTGCTGGCACATTTTCTATTCCCTCCAAGGACCCTGGTGCTGGTATAAAAGGTGATGTTTCTACCAGCAAGTTACCATCGCCAGTTAGTGAACCAGCATCAAATTTAGGTTTCCGCCCAGCAATTAGCTCTTCCAATGGGAATGCAATCCCTGGAAACAAGGAACATCAAGTTATTGGGGGAAGTCATTTCATGCCTCAGCAATATGGTGTAAATGTGGTACCTTTCCATCCCTCGGATTGGGGAAGTCGTCCAGATTCAAGAAATGCTGGCTTTGAACTGATAGGAAGAACAGGTCACGGAGCAAACCACTCTCCTGAGAATGGAAACTATTCCTGA
Protein sequence

>Msa0031830

MEDTTNNNNQVTSLFEQQSTVNVTPERNGTTTDGSHHSVTENKKKRGRPRKYESPEEAIAGRKAIAARKAAAAAAAAANATATATTSFSSPNFNKPKKFHSSSLGNSREGFNIHFVTVAPGEDIGQNIMMLMQKNSRCEMCILSASGSISSATLRQPATSGGNITYEGRFDIISLTGSYVRNELDGRSGGLSVCLSHSDGQLVGGSIAGPLKAASPVQVIAGTFSIPSKDPGAGIKGDVSTSKLPSPVSEPASNLGFRPAISSSNGNAIPGNKEHQVIGGSHFMPQQYGVNVVPFHPSDWGSRPDSRNAGFELIGRTGHGANHSPENGNYS*