AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1075220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1075220 MtrunA17_Chr7g0258611 96.040 303 10 2 1 303 1 301 0.0 589
Msa1075220 MtrunA17_Chr1g0175201 71.895 306 67 9 1 303 1 290 1.11e-139 396
Msa1075220 MtrunA17_Chr1g0213721 59.542 262 91 7 46 303 5 255 1.59e-99 293
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1075220 AT3G12130.1 52.273 308 78 6 1 303 1 244 3.62e-90 269
Msa1075220 AT5G06770.6 52.404 208 83 8 103 303 16 214 6.44e-57 183
Msa1075220 AT5G06770.6 73.770 61 16 0 25 85 5 65 1.11e-25 102
Msa1075220 AT5G06770.1 52.404 208 83 8 103 303 38 236 1.28e-56 183
Msa1075220 AT5G06770.1 70.115 87 24 1 1 85 1 87 3.95e-36 130
Msa1075220 AT5G06770.3 51.741 201 81 8 110 303 18 209 3.76e-53 173
Msa1075220 AT5G06770.3 62.791 43 16 0 43 85 18 60 2.57e-12 65.5
Msa1075220 AT5G06770.2 51.741 201 81 8 110 303 18 209 3.76e-53 173
Msa1075220 AT5G06770.2 62.791 43 16 0 43 85 18 60 2.57e-12 65.5
Msa1075220 AT5G06770.4 51.741 201 81 8 110 303 18 209 3.76e-53 173
Msa1075220 AT5G06770.4 62.791 43 16 0 43 85 18 60 2.57e-12 65.5
Msa1075220 AT3G12130.2 58.235 170 56 3 149 303 3 172 1.56e-52 170
Msa1075220 AT5G06770.5 60.000 150 52 5 155 303 22 164 1.01e-49 163

Find 117 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTGGGGCTGGAACATTTC+TGG 0.073478 7_2:-73395003 None:intergenic
AAGCTAATGTTGCTATTTAA+AGG 0.172257 7_2:-73395801 None:intergenic
AGTTCAATGTTTCTCAGATT+TGG 0.216072 7_2:-73395407 None:intergenic
GCAAAAGGATCTTGCACTTT+TGG 0.239220 7_2:+73395602 Msa1075220:CDS
ACTGCTGAAGGCTGCAAATT+TGG 0.247553 7_2:+73395092 Msa1075220:CDS
GGGAACATTTGAACAAATTA+AGG 0.249250 7_2:+73395433 Msa1075220:CDS
CACTTCTTGCACCATGTTCC+TGG 0.251613 7_2:+73394924 Msa1075220:CDS
GGGGCGCCTTGGTTTGAATT+AGG 0.279247 7_2:-73395509 None:intergenic
ATTGTTGTGCATTGCTCCTT+AGG 0.286515 7_2:+73395735 Msa1075220:three_prime_UTR
TTTCTTCCTCCGCTAGGGTT+AGG 0.294576 7_2:+73391844 Msa1075220:five_prime_UTR
GTTCAATGTTTCTCAGATTT+GGG 0.294737 7_2:-73395406 None:intergenic
CGTGGGGCTGGAACATTTCT+GGG 0.304605 7_2:-73395002 None:intergenic
AGCACTTCTGGCTGCCCATT+TGG 0.307249 7_2:+73394891 Msa1075220:intron
ATGATCTCGAATTGAAAGTT+TGG 0.321235 7_2:-73395378 None:intergenic
TAGGTGGTGCAGACATTTGC+AGG 0.328616 7_2:-73395490 None:intergenic
CTGCCAAAACGGCCAGCATT+GGG 0.346406 7_2:-73395215 None:intergenic
GGGGCCATCATGGCGCCCCT+GGG 0.351234 7_2:+73395534 Msa1075220:CDS
CCTCCTGTTCCAGCTAGCTT+TGG 0.360587 7_2:+73395254 Msa1075220:CDS
AAGGCGGTGGCTGTGATAAA+AGG 0.361237 7_2:-73391804 None:intergenic
CAGGTGTTAGATTCATCATC+TGG 0.374375 7_2:-73394965 None:intergenic
TTCTTCCTCCGCTAGGGTTA+GGG 0.374608 7_2:+73391845 Msa1075220:five_prime_UTR
AATTCAAACCAAGGCGCCCC+TGG 0.376150 7_2:+73395512 Msa1075220:CDS
ATTGTTGTTGAATCCATGTT+CGG 0.378655 7_2:-73391925 None:intergenic
GTCATTTCGCCCACGGAGAA+TGG 0.389283 7_2:+73395123 Msa1075220:CDS
AGTGTTGAAGCCTCCTTGGC+TGG 0.405561 7_2:+73395299 Msa1075220:CDS
GGCTGGAGCTATCATTGGTA+AGG 0.406355 7_2:+73395316 Msa1075220:CDS
GCTTCCTACACCAGTTGATA+AGG 0.410010 7_2:-73392708 None:intergenic
TGGGCGCATGTGCATTTCGT+GGG 0.412329 7_2:-73395019 None:intergenic
TTGTTGTTGAATCCATGTTC+GGG 0.412697 7_2:-73391924 None:intergenic
AAACAGATCTGTCGTCAAAC+TGG 0.418288 7_2:+73395353 Msa1075220:CDS
GGAGGCTTCAACACTGATCT+TGG 0.422971 7_2:-73395291 None:intergenic
CAATCTGATGAGGGAGAGAA+TGG 0.423046 7_2:-73395856 None:intergenic
ACTGCCAAAACGGCCAGCAT+TGG 0.424303 7_2:-73395216 None:intergenic
AGCAGATGGCGCAGAACCAT+TGG 0.426240 7_2:-73395039 None:intergenic
GGCCATCATGGCGCCCCTGG+GGG 0.431404 7_2:+73395536 Msa1075220:CDS
AAGTGGCAGCTCTCACCAAA+TGG 0.432857 7_2:-73394906 None:intergenic
GCTGGAACATTTCTGGGTGC+AGG 0.442312 7_2:-73394996 None:intergenic
GCAGATGGCGCAGAACCATT+GGG 0.447775 7_2:-73395038 None:intergenic
CTGGGTGCAGGAGGTGCTGC+AGG 0.454430 7_2:-73394984 None:intergenic
GCACCAAAGCTAGCTGGAAC+AGG 0.460612 7_2:-73395257 None:intergenic
CAACACCAAATTCATAAAAC+AGG 0.460654 7_2:-73395945 None:intergenic
GATCAGTGTTGAAGCCTCCT+TGG 0.462907 7_2:+73395295 Msa1075220:CDS
TCCTCTCTTGCGCATATCCA+TGG 0.463127 7_2:-73391898 None:intergenic
TTGTTGTGCATTGCTCCTTA+GGG 0.470128 7_2:+73395736 Msa1075220:three_prime_UTR
TCATTTCGCCCACGGAGAAT+GGG 0.473005 7_2:+73395124 Msa1075220:CDS
GCATGTGCATTTCGTGGGGC+TGG 0.479969 7_2:-73395014 None:intergenic
TTGGGCGCATGTGCATTTCG+TGG 0.481654 7_2:-73395020 None:intergenic
GAAATGGAGTCCTTATCAAC+TGG 0.481779 7_2:+73392698 Msa1075220:intron
ACAGAACACTACTGCTGCTA+CGG 0.482520 7_2:-73395889 None:intergenic
CCATCCGATGACTGCCAAAA+CGG 0.482989 7_2:-73395226 None:intergenic
ATTCAAACCAAGGCGCCCCT+GGG 0.483309 7_2:+73395513 Msa1075220:CDS
GGTGCACTGTCGTGTCAGAC+AGG 0.483317 7_2:+73395691 Msa1075220:three_prime_UTR
TCCTTGGCTGGAGCTATCAT+TGG 0.488960 7_2:+73395311 Msa1075220:CDS
GCCCACGGAGAATGGGAACT+TGG 0.492658 7_2:+73395131 Msa1075220:CDS
TCATCAAATGATGGAGCTAC+AGG 0.495349 7_2:-73395158 None:intergenic
CTGAGAAACATTGAACTTGA+GGG 0.498316 7_2:+73395413 Msa1075220:CDS
GCATTTGCACCAAAGCTAGC+TGG 0.505722 7_2:-73395263 None:intergenic
CGGAGGAAGAAAAGAAAAGA+GGG 0.510484 7_2:-73391833 None:intergenic
ATGAAAATCTTACCTTAATG+AGG 0.513346 7_2:+73395667 Msa1075220:exon
AAGCTAGCTGGAACAGGAGG+AGG 0.517450 7_2:-73395251 None:intergenic
GCCAAAACGGCCAGCATTGG+GGG 0.527237 7_2:-73395213 None:intergenic
TCTGAGAAACATTGAACTTG+AGG 0.528852 7_2:+73395412 Msa1075220:CDS
AGTGGCAGCTCTCACCAAAT+GGG 0.532140 7_2:-73394905 None:intergenic
CAGAACACTACTGCTGCTAC+GGG 0.544619 7_2:-73395888 None:intergenic
CATTATAACCGCCAGGAACA+TGG 0.547838 7_2:-73394935 None:intergenic
GCGCCTTGGTTTGAATTAGG+TGG 0.551052 7_2:-73395506 None:intergenic
TGCCAAAACGGCCAGCATTG+GGG 0.551878 7_2:-73395214 None:intergenic
CAAGATTCGATCTCGATCCA+TGG 0.552952 7_2:+73391881 Msa1075220:exon
TCACAATGGTCACCGTCACA+TGG 0.555494 7_2:+73395187 Msa1075220:CDS
ACTATGATAAGTTCAGTGTA+GGG 0.555898 7_2:-73395921 None:intergenic
TTCAACACTGATCTTGGCAG+TGG 0.556993 7_2:-73395285 None:intergenic
GGAACATTTCTGGGTGCAGG+AGG 0.557375 7_2:-73394993 None:intergenic
AACTATGATAAGTTCAGTGT+AGG 0.569604 7_2:-73395922 None:intergenic
ACCAAGTTCCCATTCTCCGT+GGG 0.571356 7_2:-73395132 None:intergenic
GACAAATGTCATTTCGCCCA+CGG 0.574168 7_2:+73395116 Msa1075220:CDS
GGAGCTATCATTGGTAAGGG+TGG 0.574888 7_2:+73395320 Msa1075220:CDS
GAGTCCTTATCAACTGGTGT+AGG 0.575007 7_2:+73392704 Msa1075220:CDS
GCGGAGGAAGAAAAGAAAAG+AGG 0.576822 7_2:-73391834 None:intergenic
CGAAATGCACATGCGCCCAA+TGG 0.577209 7_2:+73395023 Msa1075220:CDS
TATTAAACTTGCTGCATATG+CGG 0.578734 7_2:-73395070 None:intergenic
GCTGGAGCTATCATTGGTAA+GGG 0.579604 7_2:+73395317 Msa1075220:CDS
TACCAAGTTCCCATTCTCCG+TGG 0.580757 7_2:-73395133 None:intergenic
CAGGAACATGGTGCAAGAAG+TGG 0.580928 7_2:-73394923 None:intergenic
TTCAAACCAAGGCGCCCCTG+GGG 0.582988 7_2:+73395514 Msa1075220:CDS
GGATGCAAGCAACATGGTGA+AGG 0.586493 7_2:+73395454 Msa1075220:CDS
TGACGGTGATCATCAAATGA+TGG 0.598806 7_2:-73395167 None:intergenic
ACCAATGATAGCTCCAGCCA+AGG 0.601213 7_2:-73395312 None:intergenic
AGCAAGTTTAATACTGCTGA+AGG 0.610803 7_2:+73395080 Msa1075220:CDS
CACAATGGTCACCGTCACAT+GGG 0.612054 7_2:+73395188 Msa1075220:CDS
GAACATGGATTCAACAACAA+TGG 0.613103 7_2:+73391927 Msa1075220:CDS
GTGCACTGTCGTGTCAGACA+GGG 0.614557 7_2:+73395692 Msa1075220:three_prime_UTR
GAAACAGCATTATAACCGCC+AGG 0.616377 7_2:-73394942 None:intergenic
TAAGTCCTGTCAGTACCCTA+AGG 0.617456 7_2:-73395751 None:intergenic
TACAGTCAACAATCTGATGA+GGG 0.620247 7_2:-73395865 None:intergenic
TCCATGGATATGCGCAAGAG+AGG 0.620448 7_2:+73391897 Msa1075220:exon
CCAAAGCTAGCTGGAACAGG+AGG 0.620733 7_2:-73395254 None:intergenic
AGGTGTTAGATTCATCATCT+GGG 0.623445 7_2:-73394964 None:intergenic
TTGCTCCTTAGGGTACTGAC+AGG 0.626554 7_2:+73395746 Msa1075220:three_prime_UTR
GTACAGTCAACAATCTGATG+AGG 0.628204 7_2:-73395866 None:intergenic
TCGACAGAAAGGATGGCAGA+AGG 0.629208 7_2:-73395991 None:intergenic
TTTGATGATCACCGTCACAA+TGG 0.633364 7_2:+73395173 Msa1075220:CDS
CCAAAACGGCCAGCATTGGG+GGG 0.633415 7_2:-73395212 None:intergenic
AAAATCTTACCTTAATGAGG+CGG 0.634934 7_2:+73395670 Msa1075220:exon
AAGAGAGGAAGACCCGAACA+TGG 0.639026 7_2:+73391912 Msa1075220:CDS
AATTAAGGATGCAAGCAACA+TGG 0.639069 7_2:+73395448 Msa1075220:CDS
TCAAACCAAGGCGCCCCTGG+GGG 0.642892 7_2:+73395515 Msa1075220:CDS
GGGCGCATGTGCATTTCGTG+GGG 0.653124 7_2:-73395018 None:intergenic
AGGTGGTGCAGACATTTGCA+GGG 0.654364 7_2:-73395489 None:intergenic
GCACCACCTAATTCAAACCA+AGG 0.655471 7_2:+73395503 Msa1075220:CDS
GGAGGAAGAAAAGAAAAGAG+GGG 0.658122 7_2:-73391832 None:intergenic
TAAAACCCTAACCCTAGCGG+AGG 0.665514 7_2:-73391850 None:intergenic
TTCTTGCACCATGTTCCTGG+CGG 0.668994 7_2:+73394927 Msa1075220:CDS
CATGGATTCAACAACAATGG+CGG 0.674602 7_2:+73391930 Msa1075220:CDS
AATGATAGCTCCAGCCAAGG+AGG 0.680423 7_2:-73395309 None:intergenic
GGATTCAAGAAATCCAGACA+TGG 0.691625 7_2:+73391951 Msa1075220:CDS
GAGTAAAACCCTAACCCTAG+CGG 0.695995 7_2:-73391853 None:intergenic
TGTGACGGTGACCATTGTGA+CGG 0.721866 7_2:-73395184 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTAAAAATTTAAATT+TGG + chr7_2:73394219-73394238 Msa1075220:intron 0.0%
!! TGTATTATTATTATTGTTAT+TGG + chr7_2:73392114-73392133 Msa1075220:intron 10.0%
!!! AGTTAATTTCCAATTTTTAT+CGG + chr7_2:73392157-73392176 Msa1075220:intron 15.0%
!! TGAAATTATTGACAATTATA+AGG - chr7_2:73392201-73392220 None:intergenic 15.0%
!!! ACACAATTTTAAAACTTTTA+GGG - chr7_2:73392340-73392359 None:intergenic 15.0%
!! TTAAAATATATACAGACTTA+GGG - chr7_2:73392592-73392611 None:intergenic 15.0%
!!! TTTAAAATATATACAGACTT+AGG - chr7_2:73392593-73392612 None:intergenic 15.0%
!! TACTTATAATTTATTTAGAC+AGG - chr7_2:73392776-73392795 None:intergenic 15.0%
!!! TGATGTTAAAATTTTTAAAG+TGG - chr7_2:73393126-73393145 None:intergenic 15.0%
!! AAACTAATAATTTATGTGTA+CGG - chr7_2:73393263-73393282 None:intergenic 15.0%
!! TGCTTTATAATTATATGAAA+AGG - chr7_2:73393663-73393682 None:intergenic 15.0%
!!! TTTTCATATAATTATAAAGC+AGG + chr7_2:73393662-73393681 Msa1075220:intron 15.0%
!! AATTCAGTTGAAATATAAAA+TGG + chr7_2:73394085-73394104 Msa1075220:intron 15.0%
!! ATTCAGTTGAAATATAAAAT+GGG + chr7_2:73394086-73394105 Msa1075220:intron 15.0%
!!! ATATATTTGTTTTTTGTCAT+TGG + chr7_2:73394284-73394303 Msa1075220:intron 15.0%
!! CTAAAAATCATACAAATTCA+TGG - chr7_2:73392040-73392059 None:intergenic 20.0%
!!! CATGAATTTGTATGATTTTT+AGG + chr7_2:73392038-73392057 Msa1075220:intron 20.0%
!!! GAAATTTTACCGATAAAAAT+TGG - chr7_2:73392169-73392188 None:intergenic 20.0%
!! AATTGTCAATAATTTCAGAT+TGG + chr7_2:73392204-73392223 Msa1075220:intron 20.0%
!!! CACAGCAAATTTTAAAAAAT+TGG - chr7_2:73392290-73392309 None:intergenic 20.0%
!!! GACACAATTTTAAAACTTTT+AGG - chr7_2:73392341-73392360 None:intergenic 20.0%
!!! ATAATGTTTTGTAACAGAAA+TGG + chr7_2:73392682-73392701 Msa1075220:intron 20.0%
!! AAATTGTGCTATAATTAACT+CGG + chr7_2:73392912-73392931 Msa1075220:intron 20.0%
!! ATAAACAATAAAATCCACTA+CGG - chr7_2:73393159-73393178 None:intergenic 20.0%
!!! AGAAAATAGAGACATTTTTA+TGG + chr7_2:73393290-73393309 Msa1075220:intron 20.0%
!!! TCTTTTAAATTTTTTGCCTT+TGG + chr7_2:73393629-73393648 Msa1075220:intron 20.0%
!! AAAAGACATATGTGTAATAT+GGG - chr7_2:73394520-73394539 None:intergenic 20.0%
!! TAAAAGACATATGTGTAATA+TGG - chr7_2:73394521-73394540 None:intergenic 20.0%
!! ATATCTTGTCAAATAATTCA+TGG + chr7_2:73394758-73394777 Msa1075220:intron 20.0%
!!! GAATGGATTTTCATAATAAA+GGG - chr7_2:73395842-73395861 None:intergenic 20.0%
!!! AGAATGGATTTTCATAATAA+AGG - chr7_2:73395843-73395862 None:intergenic 20.0%
!!! TTTTCGTATAAGCTATTTCT+TGG + chr7_2:73392487-73392506 Msa1075220:intron 25.0%
! GTAAGAGATTAATAAATGAG+AGG + chr7_2:73392639-73392658 Msa1075220:intron 25.0%
! AGATTATAACCTGAAAAACT+TGG - chr7_2:73392750-73392769 None:intergenic 25.0%
!! GTATATGAAGCTTTTATTAC+AGG + chr7_2:73392934-73392953 Msa1075220:intron 25.0%
! TAAACAAGTAAACACATTAG+TGG + chr7_2:73392976-73392995 Msa1075220:intron 25.0%
! AATGGTCAATTTATCATTGA+TGG - chr7_2:73393065-73393084 None:intergenic 25.0%
! GATATGAACATGAGTAAAAA+TGG - chr7_2:73393083-73393102 None:intergenic 25.0%
! TAAACAATAAAATCCACTAC+GGG - chr7_2:73393158-73393177 None:intergenic 25.0%
!! AAGTTCAATTCATGTTACTT+AGG - chr7_2:73393211-73393230 None:intergenic 25.0%
!! TAACATGAATTGAACTTGTT+TGG + chr7_2:73393214-73393233 Msa1075220:intron 25.0%
!! TTAGAATTGTTTCTTGTTCA+AGG - chr7_2:73393327-73393346 None:intergenic 25.0%
!! CTTCGATAAGTAATCAATTT+TGG + chr7_2:73393567-73393586 Msa1075220:intron 25.0%
!!! ATAAGTAATCAATTTTGGTG+AGG + chr7_2:73393572-73393591 Msa1075220:intron 25.0%
!! AGAAAAATTGATTTCTACAG+AGG - chr7_2:73393612-73393631 None:intergenic 25.0%
! AATTATAAAGCAGGATAAGT+TGG + chr7_2:73393671-73393690 Msa1075220:intron 25.0%
!! AACTTTCATGCGTATATTTT+TGG + chr7_2:73393718-73393737 Msa1075220:intron 25.0%
!!! TACTCAACTTTTCAAGAATT+TGG + chr7_2:73393837-73393856 Msa1075220:intron 25.0%
!!! ATCATTGATTTGATTCAAAC+TGG + chr7_2:73393915-73393934 Msa1075220:intron 25.0%
!!! TCATTGATTTGATTCAAACT+GGG + chr7_2:73393916-73393935 Msa1075220:intron 25.0%
! TTAAAGAACATCTCTAATAG+GGG - chr7_2:73394179-73394198 None:intergenic 25.0%
! GTTAAAGAACATCTCTAATA+GGG - chr7_2:73394180-73394199 None:intergenic 25.0%
! AGTTAAAGAACATCTCTAAT+AGG - chr7_2:73394181-73394200 None:intergenic 25.0%
!! TTACATGCACTATTCTAAAA+TGG + chr7_2:73394454-73394473 Msa1075220:intron 25.0%
!! CATATGTCTTTTATACTGTT+TGG + chr7_2:73394528-73394547 Msa1075220:intron 25.0%
! TTAGCTTATTCATATGTATC+TGG + chr7_2:73394600-73394619 Msa1075220:intron 25.0%
! TAGCTTATTCATATGTATCT+GGG + chr7_2:73394601-73394620 Msa1075220:intron 25.0%
!! AGAACAAAGGTGTATTAATT+AGG - chr7_2:73394716-73394735 None:intergenic 25.0%
! ATGAAAATCTTACCTTAATG+AGG + chr7_2:73395667-73395686 Msa1075220:exon 25.0%
!!! AAGCTAATGTTGCTATTTAA+AGG - chr7_2:73395804-73395823 None:intergenic 25.0%
!! TAGTTCCTGTTTTATGAATT+TGG + chr7_2:73395940-73395959 Msa1075220:three_prime_UTR 25.0%
! ATTGTTGTTGAATCCATGTT+CGG - chr7_2:73391928-73391947 None:intergenic 30.0%
AAAAAAAAACGAACCATGTC+TGG - chr7_2:73391967-73391986 None:intergenic 30.0%
TGGTCAAATATTCAGTAGTT+CGG + chr7_2:73392224-73392243 Msa1075220:intron 30.0%
TACAGGTACAAACTGTTATT+TGG + chr7_2:73392951-73392970 Msa1075220:intron 30.0%
!! CAAAGTGTAGTCTTTTAAGT+AGG - chr7_2:73393016-73393035 None:intergenic 30.0%
! TTATGAACCAACCTTTTGAT+CGG + chr7_2:73393175-73393194 Msa1075220:intron 30.0%
! TGAATTGAACTTGTTTGGTT+CGG + chr7_2:73393219-73393238 Msa1075220:intron 30.0%
TGTTTCTTGTTCAAGGTTTA+TGG - chr7_2:73393320-73393339 None:intergenic 30.0%
AAACAATTCTAATCGATCTC+AGG + chr7_2:73393335-73393354 Msa1075220:intron 30.0%
! ATTCGTCAATTGTTTCTTGA+TGG - chr7_2:73393379-73393398 None:intergenic 30.0%
CCATTAGAGAAACAATAAGA+GGG - chr7_2:73393407-73393426 None:intergenic 30.0%
ACCATTAGAGAAACAATAAG+AGG - chr7_2:73393408-73393427 None:intergenic 30.0%
AGACGATAAAATGGCAATAA+TGG - chr7_2:73393761-73393780 None:intergenic 30.0%
! TTTTGTTCCGTATGAAATTC+TGG + chr7_2:73393802-73393821 Msa1075220:intron 30.0%
! GGATTTTCCAGAATTTCATA+CGG - chr7_2:73393812-73393831 None:intergenic 30.0%
! ATGAAATTCTGGAAAATCCT+AGG + chr7_2:73393813-73393832 Msa1075220:intron 30.0%
TTACAAGTCAAAATGTGTGA+AGG + chr7_2:73393874-73393893 Msa1075220:intron 30.0%
TAAAGAACATCTCTAATAGG+GGG - chr7_2:73394178-73394197 None:intergenic 30.0%
!!! GTGAAGTCTTTTTAGAATGT+TGG + chr7_2:73394311-73394330 Msa1075220:intron 30.0%
!! TAATATGTAGAGTGTCGTTT+GGG + chr7_2:73394387-73394406 Msa1075220:intron 30.0%
AGCTTATTCATATGTATCTG+GGG + chr7_2:73394602-73394621 Msa1075220:intron 30.0%
TGTCAAATAATTCATGGATC+TGG + chr7_2:73394764-73394783 Msa1075220:intron 30.0%
GTCAAATAATTCATGGATCT+GGG + chr7_2:73394765-73394784 Msa1075220:intron 30.0%
!! TATTAAACTTGCTGCATATG+CGG - chr7_2:73395073-73395092 None:intergenic 30.0%
ATGATCTCGAATTGAAAGTT+TGG - chr7_2:73395381-73395400 None:intergenic 30.0%
GTTCAATGTTTCTCAGATTT+GGG - chr7_2:73395409-73395428 None:intergenic 30.0%
AGTTCAATGTTTCTCAGATT+TGG - chr7_2:73395410-73395429 None:intergenic 30.0%
GGGAACATTTGAACAAATTA+AGG + chr7_2:73395433-73395452 Msa1075220:CDS 30.0%
!!! TTTTCAAGTTGTTTCCATGA+TGG - chr7_2:73395562-73395581 None:intergenic 30.0%
AAAATCTTACCTTAATGAGG+CGG + chr7_2:73395670-73395689 Msa1075220:exon 30.0%
ACTATGATAAGTTCAGTGTA+GGG - chr7_2:73395924-73395943 None:intergenic 30.0%
AACTATGATAAGTTCAGTGT+AGG - chr7_2:73395925-73395944 None:intergenic 30.0%
CAACACCAAATTCATAAAAC+AGG - chr7_2:73395948-73395967 None:intergenic 30.0%
!!! GTTTTATGAATTTGGTGTTG+CGG + chr7_2:73395948-73395967 Msa1075220:three_prime_UTR 30.0%
!! AAAGAAAAGAGGGGTTTTGA+AGG - chr7_2:73391826-73391845 None:intergenic 35.0%
! TTGTTGTTGAATCCATGTTC+GGG - chr7_2:73391927-73391946 None:intergenic 35.0%
GAACATGGATTCAACAACAA+TGG + chr7_2:73391927-73391946 Msa1075220:CDS 35.0%
! TTGGTGTGTTTCTGTGTAAT+TGG + chr7_2:73392133-73392152 Msa1075220:intron 35.0%
GGTCAAATATTCAGTAGTTC+GGG + chr7_2:73392225-73392244 Msa1075220:intron 35.0%
ATAAGCTGTTTGTCCAAACA+GGG - chr7_2:73392381-73392400 None:intergenic 35.0%
AATAAGCTGTTTGTCCAAAC+AGG - chr7_2:73392382-73392401 None:intergenic 35.0%
AAATGAGAGGATGTTAACTG+AGG + chr7_2:73392652-73392671 Msa1075220:intron 35.0%
AACCTGAAAAACTTGGTACA+TGG - chr7_2:73392743-73392762 None:intergenic 35.0%
CTTAAAAGACTACACTTTGC+AGG + chr7_2:73393017-73393036 Msa1075220:intron 35.0%
TTAGAGAAACAATAAGAGGG+TGG - chr7_2:73393404-73393423 None:intergenic 35.0%
! CCCTCTTATTGTTTCTCTAA+TGG + chr7_2:73393404-73393423 Msa1075220:intron 35.0%
AGGGATACAGTAAACAATGA+GGG - chr7_2:73393468-73393487 None:intergenic 35.0%
AAGGGATACAGTAAACAATG+AGG - chr7_2:73393469-73393488 None:intergenic 35.0%
GACAGAGCAGAAAAACAAAA+GGG - chr7_2:73393487-73393506 None:intergenic 35.0%
TGACAGAGCAGAAAAACAAA+AGG - chr7_2:73393488-73393507 None:intergenic 35.0%
!! ATCAATTTTGGTGAGGTGAA+TGG + chr7_2:73393579-73393598 Msa1075220:intron 35.0%
!! TCAATTTTGGTGAGGTGAAT+GGG + chr7_2:73393580-73393599 Msa1075220:intron 35.0%
AAGCTCTGTAGACGATAAAA+TGG - chr7_2:73393770-73393789 None:intergenic 35.0%
CTTGAAAAGTTGAGTAACCT+AGG - chr7_2:73393833-73393852 None:intergenic 35.0%
GATTTGATTCAAACTGGGTT+AGG + chr7_2:73393921-73393940 Msa1075220:intron 35.0%
TGAACACACGAACATAATCT+AGG + chr7_2:73393984-73394003 Msa1075220:intron 35.0%
!! GTAATATGTAGAGTGTCGTT+TGG + chr7_2:73394386-73394405 Msa1075220:intron 35.0%
AAACATACAGCACGAACATT+TGG - chr7_2:73394554-73394573 None:intergenic 35.0%
! GTGCTGTATGTTTTCCTTTA+AGG + chr7_2:73394561-73394580 Msa1075220:intron 35.0%
GCTTATTCATATGTATCTGG+GGG + chr7_2:73394603-73394622 Msa1075220:intron 35.0%
CTTATTCATATGTATCTGGG+GGG + chr7_2:73394604-73394623 Msa1075220:intron 35.0%
AGCATTTGAGAGTTTATGAC+TGG + chr7_2:73394656-73394675 Msa1075220:intron 35.0%
ATGCAAAGTAGATCTGTGAA+TGG + chr7_2:73394682-73394701 Msa1075220:intron 35.0%
TATAGAGAGAGAGAGAACAA+AGG - chr7_2:73394729-73394748 None:intergenic 35.0%
!!! TTTTTGTTTTGCAGCACTTC+TGG + chr7_2:73394879-73394898 Msa1075220:intron 35.0%
AGGTGTTAGATTCATCATCT+GGG - chr7_2:73394967-73394986 None:intergenic 35.0%
AGCAAGTTTAATACTGCTGA+AGG + chr7_2:73395080-73395099 Msa1075220:CDS 35.0%
TCTGAGAAACATTGAACTTG+AGG + chr7_2:73395412-73395431 Msa1075220:CDS 35.0%
CTGAGAAACATTGAACTTGA+GGG + chr7_2:73395413-73395432 Msa1075220:CDS 35.0%
AATTAAGGATGCAAGCAACA+TGG + chr7_2:73395448-73395467 Msa1075220:CDS 35.0%
! CTGTGTGAGAATTTTGCAAA+AGG + chr7_2:73395587-73395606 Msa1075220:CDS 35.0%
!!! GAAAGATGTCATTTTGCACA+TGG + chr7_2:73395626-73395645 Msa1075220:CDS 35.0%
TACAGTCAACAATCTGATGA+GGG - chr7_2:73395868-73395887 None:intergenic 35.0%
GGAGGAAGAAAAGAAAAGAG+GGG - chr7_2:73391835-73391854 None:intergenic 40.0%
CGGAGGAAGAAAAGAAAAGA+GGG - chr7_2:73391836-73391855 None:intergenic 40.0%
! TTTTCTTTTCTTCCTCCGCT+AGG + chr7_2:73391838-73391857 Msa1075220:five_prime_UTR 40.0%
! TTTCTTTTCTTCCTCCGCTA+GGG + chr7_2:73391839-73391858 Msa1075220:five_prime_UTR 40.0%
CATGGATTCAACAACAATGG+CGG + chr7_2:73391930-73391949 Msa1075220:CDS 40.0%
GGATTCAAGAAATCCAGACA+TGG + chr7_2:73391951-73391970 Msa1075220:CDS 40.0%
TGGTAAAAACGAAAGCGAAG+CGG - chr7_2:73392020-73392039 None:intergenic 40.0%
! TTGTGTCACTCTACAAAGCA+AGG + chr7_2:73392354-73392373 Msa1075220:intron 40.0%
! TGTGTCACTCTACAAAGCAA+GGG + chr7_2:73392355-73392374 Msa1075220:intron 40.0%
TCAGATAAGCCAATCCAAAC+AGG + chr7_2:73392566-73392585 Msa1075220:intron 40.0%
GAAATGGAGTCCTTATCAAC+TGG + chr7_2:73392698-73392717 Msa1075220:intron 40.0%
! AGCCATGTACCAAGTTTTTC+AGG + chr7_2:73392738-73392757 Msa1075220:CDS 40.0%
ACACTTTGCAGGACAATAGT+TGG + chr7_2:73393028-73393047 Msa1075220:intron 40.0%
CACTTTGCAGGACAATAGTT+GGG + chr7_2:73393029-73393048 Msa1075220:intron 40.0%
TAGCTTACCGATCAAAAGGT+TGG - chr7_2:73393185-73393204 None:intergenic 40.0%
!!! GGTCTGCAATGTTTTGAAGT+TGG + chr7_2:73393425-73393444 Msa1075220:intron 40.0%
CAGTAAACAATGAGGGAAAG+TGG - chr7_2:73393461-73393480 None:intergenic 40.0%
TGAAAAGGTCAGACAACCAA+AGG - chr7_2:73393648-73393667 None:intergenic 40.0%
! TCCTCTGTGTTCTTTTCACT+TGG + chr7_2:73394148-73394167 Msa1075220:intron 40.0%
ACCAAGTGAAAAGAACACAG+AGG - chr7_2:73394152-73394171 None:intergenic 40.0%
!! TTAAGTGTCCTAGAAGTGTC+TGG + chr7_2:73394334-73394353 Msa1075220:intron 40.0%
!! TAAGTGTCCTAGAAGTGTCT+GGG + chr7_2:73394335-73394354 Msa1075220:intron 40.0%
TAACAGTTACAGCCAATGTC+TGG - chr7_2:73394437-73394456 None:intergenic 40.0%
TAATATGGGACAGATCTAGC+AGG - chr7_2:73394506-73394525 None:intergenic 40.0%
! TCCTTTAAGGATCTCAGTGT+TGG + chr7_2:73394574-73394593 Msa1075220:intron 40.0%
TCCAACACTGAGATCCTTAA+AGG - chr7_2:73394578-73394597 None:intergenic 40.0%
! TTGTGTTGATGCTCTTATGC+AGG + chr7_2:73394789-73394808 Msa1075220:intron 40.0%
CAGGTGTTAGATTCATCATC+TGG - chr7_2:73394968-73394987 None:intergenic 40.0%
! TCATCAAATGATGGAGCTAC+AGG - chr7_2:73395161-73395180 None:intergenic 40.0%
TGACGGTGATCATCAAATGA+TGG - chr7_2:73395170-73395189 None:intergenic 40.0%
! TTTGATGATCACCGTCACAA+TGG + chr7_2:73395173-73395192 Msa1075220:CDS 40.0%
AAACAGATCTGTCGTCAAAC+TGG + chr7_2:73395353-73395372 Msa1075220:CDS 40.0%
! GCAAAAGGATCTTGCACTTT+TGG + chr7_2:73395602-73395621 Msa1075220:CDS 40.0%
ATTGTTGTGCATTGCTCCTT+AGG + chr7_2:73395735-73395754 Msa1075220:three_prime_UTR 40.0%
TTGTTGTGCATTGCTCCTTA+GGG + chr7_2:73395736-73395755 Msa1075220:three_prime_UTR 40.0%
GTACAGTCAACAATCTGATG+AGG - chr7_2:73395869-73395888 None:intergenic 40.0%
!!! GAAAAGAGGGGTTTTGAAGG+CGG - chr7_2:73391823-73391842 None:intergenic 45.0%
GCGGAGGAAGAAAAGAAAAG+AGG - chr7_2:73391837-73391856 None:intergenic 45.0%
GAGTAAAACCCTAACCCTAG+CGG - chr7_2:73391856-73391875 None:intergenic 45.0%
CAAGATTCGATCTCGATCCA+TGG + chr7_2:73391881-73391900 Msa1075220:exon 45.0%
ATACAGACTTAGGGCCTGTT+TGG - chr7_2:73392583-73392602 None:intergenic 45.0%
GAGTCCTTATCAACTGGTGT+AGG + chr7_2:73392704-73392723 Msa1075220:CDS 45.0%
! GCTTCCTACACCAGTTGATA+AGG - chr7_2:73392711-73392730 None:intergenic 45.0%
GCGATAGCTTACCGATCAAA+AGG - chr7_2:73393189-73393208 None:intergenic 45.0%
!! TGAACTTGTTTGGTTCGGTC+AGG + chr7_2:73393224-73393243 Msa1075220:intron 45.0%
!! TTGTTTGGTTCGGTCAGGTA+TGG + chr7_2:73393229-73393248 Msa1075220:intron 45.0%
ACTGCATGTGTGTGTACTTG+TGG + chr7_2:73394017-73394036 Msa1075220:intron 45.0%
CTGCATGTGTGTGTACTTGT+GGG + chr7_2:73394018-73394037 Msa1075220:intron 45.0%
TGCATGTGTGTGTACTTGTG+GGG + chr7_2:73394019-73394038 Msa1075220:intron 45.0%
!! TTTGGGTGTTGGTGTTGTGT+GGG + chr7_2:73394404-73394423 Msa1075220:intron 45.0%
GTGGGAAATATGCCAGACAT+TGG + chr7_2:73394422-73394441 Msa1075220:intron 45.0%
CCAACTTCAAAGGATCACAC+AGG - chr7_2:73394483-73394502 None:intergenic 45.0%
!! CCTGTGTGATCCTTTGAAGT+TGG + chr7_2:73394480-73394499 Msa1075220:intron 45.0%
ATCTAGCAGGCCAACTTCAA+AGG - chr7_2:73394493-73394512 None:intergenic 45.0%
TGTTGATGCTCTTATGCAGG+TGG + chr7_2:73394792-73394811 Msa1075220:intron 45.0%
TGCTCTTATGCAGGTGGATA+AGG + chr7_2:73394798-73394817 Msa1075220:intron 45.0%
GCTCTTATGCAGGTGGATAA+GGG + chr7_2:73394799-73394818 Msa1075220:intron 45.0%
TTATGCAGGTGGATAAGGGT+GGG + chr7_2:73394803-73394822 Msa1075220:intron 45.0%
CATTATAACCGCCAGGAACA+TGG - chr7_2:73394938-73394957 None:intergenic 45.0%
GAAACAGCATTATAACCGCC+AGG - chr7_2:73394945-73394964 None:intergenic 45.0%
! ATGCGGCTTTTAACAGCAGA+TGG - chr7_2:73395056-73395075 None:intergenic 45.0%
ACTGCTGAAGGCTGCAAATT+TGG + chr7_2:73395092-73395111 Msa1075220:CDS 45.0%
! GACAAATGTCATTTCGCCCA+CGG + chr7_2:73395116-73395135 Msa1075220:CDS 45.0%
TTCAACACTGATCTTGGCAG+TGG - chr7_2:73395288-73395307 None:intergenic 45.0%
GCTGGAGCTATCATTGGTAA+GGG + chr7_2:73395317-73395336 Msa1075220:CDS 45.0%
GCACCACCTAATTCAAACCA+AGG + chr7_2:73395503-73395522 Msa1075220:CDS 45.0%
TAAGTCCTGTCAGTACCCTA+AGG - chr7_2:73395754-73395773 None:intergenic 45.0%
CAATCTGATGAGGGAGAGAA+TGG - chr7_2:73395859-73395878 None:intergenic 45.0%
ACAGAACACTACTGCTGCTA+CGG - chr7_2:73395892-73395911 None:intergenic 45.0%
AAGGCGGTGGCTGTGATAAA+AGG - chr7_2:73391807-73391826 None:intergenic 50.0%
TTTCTTCCTCCGCTAGGGTT+AGG + chr7_2:73391844-73391863 Msa1075220:five_prime_UTR 50.0%
TTCTTCCTCCGCTAGGGTTA+GGG + chr7_2:73391845-73391864 Msa1075220:five_prime_UTR 50.0%
TAAAACCCTAACCCTAGCGG+AGG - chr7_2:73391853-73391872 None:intergenic 50.0%
TCCATGGATATGCGCAAGAG+AGG + chr7_2:73391897-73391916 Msa1075220:exon 50.0%
TCCTCTCTTGCGCATATCCA+TGG - chr7_2:73391901-73391920 None:intergenic 50.0%
AAGAGAGGAAGACCCGAACA+TGG + chr7_2:73391912-73391931 Msa1075220:CDS 50.0%
TACAAAGCAAGGGCCCTGTT+TGG + chr7_2:73392365-73392384 Msa1075220:intron 50.0%
GACTTAGGGCCTGTTTGGAT+TGG - chr7_2:73392578-73392597 None:intergenic 50.0%
ATCAAGCTTTCAGCCCGTAG+TGG + chr7_2:73393142-73393161 Msa1075220:intron 50.0%
! AAGTGTCTGGGTGCTTGCTA+GGG + chr7_2:73394347-73394366 Msa1075220:intron 50.0%
!! GTAGAGTGTCGTTTGGGTGT+TGG + chr7_2:73394393-73394412 Msa1075220:intron 50.0%
!! GTTTGGGTGTTGGTGTTGTG+TGG + chr7_2:73394403-73394422 Msa1075220:intron 50.0%
TGGGGGGACTTACGATATTC+TGG + chr7_2:73394620-73394639 Msa1075220:intron 50.0%
CTTATGCAGGTGGATAAGGG+TGG + chr7_2:73394802-73394821 Msa1075220:intron 50.0%
AGTGGCAGCTCTCACCAAAT+GGG - chr7_2:73394908-73394927 None:intergenic 50.0%
AAGTGGCAGCTCTCACCAAA+TGG - chr7_2:73394909-73394928 None:intergenic 50.0%
CAGGAACATGGTGCAAGAAG+TGG - chr7_2:73394926-73394945 None:intergenic 50.0%
CACTTCTTGCACCATGTTCC+TGG + chr7_2:73394924-73394943 Msa1075220:CDS 50.0%
TTCTTGCACCATGTTCCTGG+CGG + chr7_2:73394927-73394946 Msa1075220:CDS 50.0%
TCATTTCGCCCACGGAGAAT+GGG + chr7_2:73395124-73395143 Msa1075220:CDS 50.0%
ACCAAGTTCCCATTCTCCGT+GGG - chr7_2:73395135-73395154 None:intergenic 50.0%
TACCAAGTTCCCATTCTCCG+TGG - chr7_2:73395136-73395155 None:intergenic 50.0%
TGTGACGGTGACCATTGTGA+CGG - chr7_2:73395187-73395206 None:intergenic 50.0%
TCACAATGGTCACCGTCACA+TGG + chr7_2:73395187-73395206 Msa1075220:CDS 50.0%
CACAATGGTCACCGTCACAT+GGG + chr7_2:73395188-73395207 Msa1075220:CDS 50.0%
CCATCCGATGACTGCCAAAA+CGG - chr7_2:73395229-73395248 None:intergenic 50.0%
GCATTTGCACCAAAGCTAGC+TGG - chr7_2:73395266-73395285 None:intergenic 50.0%
GGAGGCTTCAACACTGATCT+TGG - chr7_2:73395294-73395313 None:intergenic 50.0%
! GATCAGTGTTGAAGCCTCCT+TGG + chr7_2:73395295-73395314 Msa1075220:CDS 50.0%
AATGATAGCTCCAGCCAAGG+AGG - chr7_2:73395312-73395331 None:intergenic 50.0%
TCCTTGGCTGGAGCTATCAT+TGG + chr7_2:73395311-73395330 Msa1075220:CDS 50.0%
ACCAATGATAGCTCCAGCCA+AGG - chr7_2:73395315-73395334 None:intergenic 50.0%
GGCTGGAGCTATCATTGGTA+AGG + chr7_2:73395316-73395335 Msa1075220:CDS 50.0%
GGAGCTATCATTGGTAAGGG+TGG + chr7_2:73395320-73395339 Msa1075220:CDS 50.0%
GGATGCAAGCAACATGGTGA+AGG + chr7_2:73395454-73395473 Msa1075220:CDS 50.0%
AGGTGGTGCAGACATTTGCA+GGG - chr7_2:73395492-73395511 None:intergenic 50.0%
TAGGTGGTGCAGACATTTGC+AGG - chr7_2:73395493-73395512 None:intergenic 50.0%
! GCGCCTTGGTTTGAATTAGG+TGG - chr7_2:73395509-73395528 None:intergenic 50.0%
!! TTGCTCCTTAGGGTACTGAC+AGG + chr7_2:73395746-73395765 Msa1075220:three_prime_UTR 50.0%
CAGAACACTACTGCTGCTAC+GGG - chr7_2:73395891-73395910 None:intergenic 50.0%
!!! AAGAGGGGTTTTGAAGGCGG+TGG - chr7_2:73391820-73391839 None:intergenic 55.0%
GCAAGCACCCAGACACTTCT+AGG - chr7_2:73394345-73394364 None:intergenic 55.0%
! GAAGTGTCTGGGTGCTTGCT+AGG + chr7_2:73394346-73394365 Msa1075220:intron 55.0%
! AGCACTTCTGGCTGCCCATT+TGG + chr7_2:73394891-73394910 Msa1075220:intron 55.0%
! GGAACATTTCTGGGTGCAGG+AGG - chr7_2:73394996-73395015 None:intergenic 55.0%
! GCTGGAACATTTCTGGGTGC+AGG - chr7_2:73394999-73395018 None:intergenic 55.0%
CGTGGGGCTGGAACATTTCT+GGG - chr7_2:73395005-73395024 None:intergenic 55.0%
TCGTGGGGCTGGAACATTTC+TGG - chr7_2:73395006-73395025 None:intergenic 55.0%
TGGGCGCATGTGCATTTCGT+GGG - chr7_2:73395022-73395041 None:intergenic 55.0%
TTGGGCGCATGTGCATTTCG+TGG - chr7_2:73395023-73395042 None:intergenic 55.0%
CGAAATGCACATGCGCCCAA+TGG + chr7_2:73395023-73395042 Msa1075220:CDS 55.0%
GCAGATGGCGCAGAACCATT+GGG - chr7_2:73395041-73395060 None:intergenic 55.0%
AGCAGATGGCGCAGAACCAT+TGG - chr7_2:73395042-73395061 None:intergenic 55.0%
GTCATTTCGCCCACGGAGAA+TGG + chr7_2:73395123-73395142 Msa1075220:CDS 55.0%
TGCCAAAACGGCCAGCATTG+GGG - chr7_2:73395217-73395236 None:intergenic 55.0%
CTGCCAAAACGGCCAGCATT+GGG - chr7_2:73395218-73395237 None:intergenic 55.0%
ACTGCCAAAACGGCCAGCAT+TGG - chr7_2:73395219-73395238 None:intergenic 55.0%
!! CTGGCCGTTTTGGCAGTCAT+CGG + chr7_2:73395222-73395241 Msa1075220:CDS 55.0%
!! CCGTTTTGGCAGTCATCGGA+TGG + chr7_2:73395226-73395245 Msa1075220:CDS 55.0%
AAGCTAGCTGGAACAGGAGG+AGG - chr7_2:73395254-73395273 None:intergenic 55.0%
CCAAAGCTAGCTGGAACAGG+AGG - chr7_2:73395257-73395276 None:intergenic 55.0%
! CCTCCTGTTCCAGCTAGCTT+TGG + chr7_2:73395254-73395273 Msa1075220:CDS 55.0%
GCACCAAAGCTAGCTGGAAC+AGG - chr7_2:73395260-73395279 None:intergenic 55.0%
! AGTGTTGAAGCCTCCTTGGC+TGG + chr7_2:73395299-73395318 Msa1075220:CDS 55.0%
! GGGGCGCCTTGGTTTGAATT+AGG - chr7_2:73395512-73395531 None:intergenic 55.0%
! AATTCAAACCAAGGCGCCCC+TGG + chr7_2:73395512-73395531 Msa1075220:CDS 55.0%
! ATTCAAACCAAGGCGCCCCT+GGG + chr7_2:73395513-73395532 Msa1075220:CDS 55.0%
TGTTTCCATGATGGCCCCCA+GGG - chr7_2:73395553-73395572 None:intergenic 55.0%
TTGTTTCCATGATGGCCCCC+AGG - chr7_2:73395554-73395573 None:intergenic 55.0%
GACAGTGCACCGCCTCATTA+AGG - chr7_2:73395682-73395701 None:intergenic 55.0%
GTGCACTGTCGTGTCAGACA+GGG + chr7_2:73395692-73395711 Msa1075220:three_prime_UTR 55.0%
GCATGTGCATTTCGTGGGGC+TGG - chr7_2:73395017-73395036 None:intergenic 60.0%
GGGCGCATGTGCATTTCGTG+GGG - chr7_2:73395021-73395040 None:intergenic 60.0%
GCCCACGGAGAATGGGAACT+TGG + chr7_2:73395131-73395150 Msa1075220:CDS 60.0%
CATTGGGGGGTCCCATGTGA+CGG - chr7_2:73395202-73395221 None:intergenic 60.0%
! CCAAAACGGCCAGCATTGGG+GGG - chr7_2:73395215-73395234 None:intergenic 60.0%
! GCCAAAACGGCCAGCATTGG+GGG - chr7_2:73395216-73395235 None:intergenic 60.0%
! TTCAAACCAAGGCGCCCCTG+GGG + chr7_2:73395514-73395533 Msa1075220:CDS 60.0%
GTTTCCATGATGGCCCCCAG+GGG - chr7_2:73395552-73395571 None:intergenic 60.0%
GGTGCACTGTCGTGTCAGAC+AGG + chr7_2:73395691-73395710 Msa1075220:three_prime_UTR 60.0%
CACATGGGACCCCCCAATGC+TGG + chr7_2:73395203-73395222 Msa1075220:CDS 65.0%
! CCCCCCAATGCTGGCCGTTT+TGG + chr7_2:73395212-73395231 Msa1075220:CDS 65.0%
! TCAAACCAAGGCGCCCCTGG+GGG + chr7_2:73395515-73395534 Msa1075220:CDS 65.0%
!! CTGGGTGCAGGAGGTGCTGC+AGG - chr7_2:73394987-73395006 None:intergenic 70.0%
GGCGCCATGATGGCCCCCAG+GGG - chr7_2:73395531-73395550 None:intergenic 75.0%
GGGCGCCATGATGGCCCCCA+GGG - chr7_2:73395532-73395551 None:intergenic 75.0%
GGGGCCATCATGGCGCCCCT+GGG + chr7_2:73395534-73395553 Msa1075220:CDS 75.0%
GGGCCATCATGGCGCCCCTG+GGG + chr7_2:73395535-73395554 Msa1075220:CDS 75.0%
GGCCATCATGGCGCCCCTGG+GGG + chr7_2:73395536-73395555 Msa1075220:CDS 75.0%
!!! GATGGCCCCCAGGGGCGCCT+TGG - chr7_2:73395523-73395542 None:intergenic 80.0%
! GGCGCCCCTGGGGGCCATCA+TGG + chr7_2:73395524-73395543 Msa1075220:CDS 80.0%
!! GGGGCGCCATGATGGCCCCC+AGG - chr7_2:73395533-73395552 None:intergenic 80.0%
! GGGGGCCATCATGGCGCCCC+TGG + chr7_2:73395533-73395552 Msa1075220:CDS 80.0%
!!! GGCCCCCAGGGGCGCCATGA+TGG - chr7_2:73395541-73395560 None:intergenic 80.0%
! GGCGCCCCTGGGGGCCATCA+TGG + chr7_2:73395524-73395543 Msa1075220:CDS 80.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 73391763 73395998 73391763 ID=Msa1075220;Name=Msa1075220
chr7_2 mRNA 73391763 73395998 73391763 ID=Msa1075220-mRNA-1;Parent=Msa1075220;Name=Msa1075220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=137|1|1|1|1|1|3|328|303
chr7_2 exon 73391763 73391972 73391763 ID=Msa1075220-mRNA-1:exon:17065;Parent=Msa1075220-mRNA-1
chr7_2 exon 73392699 73392759 73392699 ID=Msa1075220-mRNA-1:exon:17066;Parent=Msa1075220-mRNA-1
chr7_2 exon 73394893 73395998 73394893 ID=Msa1075220-mRNA-1:exon:17067;Parent=Msa1075220-mRNA-1
chr7_2 five_prime_UTR 73391763 73391899 73391763 ID=Msa1075220-mRNA-1:five_prime_utr;Parent=Msa1075220-mRNA-1
chr7_2 CDS 73391900 73391972 73391900 ID=Msa1075220-mRNA-1:cds;Parent=Msa1075220-mRNA-1
chr7_2 CDS 73392699 73392759 73392699 ID=Msa1075220-mRNA-1:cds;Parent=Msa1075220-mRNA-1
chr7_2 CDS 73394893 73395670 73394893 ID=Msa1075220-mRNA-1:cds;Parent=Msa1075220-mRNA-1
chr7_2 three_prime_UTR 73395671 73395998 73395671 ID=Msa1075220-mRNA-1:three_prime_utr;Parent=Msa1075220-mRNA-1
Gene Sequence

>Msa1075220

ATGGATATGCGCAAGAGAGGAAGACCCGAACATGGATTCAACAACAATGGCGGATTCAAGAAATCCAGACATGAAATGGAGTCCTTATCAACTGGTGTAGGAAGCAAATCGAAGCCATGTACCAAGTTTTTCAGCACTTCTGGCTGCCCATTTGGTGAGAGCTGCCACTTCTTGCACCATGTTCCTGGCGGTTATAATGCTGTTTCCCAGATGATGAATCTAACACCTGCAGCACCTCCTGCACCCAGAAATGTTCCAGCCCCACGAAATGCACATGCGCCCAATGGTTCTGCGCCATCTGCTGTTAAAAGCCGCATATGCAGCAAGTTTAATACTGCTGAAGGCTGCAAATTTGGTGACAAATGTCATTTCGCCCACGGAGAATGGGAACTTGGTAAGCCTGTAGCTCCATCATTTGATGATCACCGTCACAATGGTCACCGTCACATGGGACCCCCCAATGCTGGCCGTTTTGGCAGTCATCGGATGGAGCCTCCTCCTGTTCCAGCTAGCTTTGGTGCAAATGCCACTGCCAAGATCAGTGTTGAAGCCTCCTTGGCTGGAGCTATCATTGGTAAGGGTGGTGTGAACTCAAAACAGATCTGTCGTCAAACTGGTGCCAAACTTTCAATTCGAGATCATGAAGACCCAAATCTGAGAAACATTGAACTTGAGGGAACATTTGAACAAATTAAGGATGCAAGCAACATGGTGAAGGATTTACTGTTGACCCTGCAAATGTCTGCACCACCTAATTCAAACCAAGGCGCCCCTGGGGGCCATCATGGCGCCCCTGGGGGCCATCATGGAAACAACTTGAAAACAAAACTGTGTGAGAATTTTGCAAAAGGATCTTGCACTTTTGGAGAAAGATGTCATTTTGCACATGGAGCTGCTGAATTGCGTAAATGA

Protein sequence

>Msa1075220

MDMRKRGRPEHGFNNNGGFKKSRHEMESLSTGVGSKSKPCTKFFSTSGCPFGESCHFLHHVPGGYNAVSQMMNLTPAAPPAPRNVPAPRNAHAPNGSAPSAVKSRICSKFNTAEGCKFGDKCHFAHGEWELGKPVAPSFDDHRHNGHRHMGPPNAGRFGSHRMEPPPVPASFGANATAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIRDHEDPNLRNIELEGTFEQIKDASNMVKDLLLTLQMSAPPNSNQGAPGGHHGAPGGHHGNNLKTKLCENFAKGSCTFGERCHFAHGAAELRK*