Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034200 | sp|P93033|FUM1_ARATH | 79.443 | 467 | 59 | 5 | 1 | 433 | 1 | 464 | 0.0 | 729 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034200 | Msa0128320 | 0.872142 | 3.989670e-67 | -8.615850e-47 |
| Msa0034200 | Msa0189080 | 0.846934 | 1.589304e-59 | -8.615850e-47 |
| Msa0034200 | Msa0231290 | 0.812676 | 3.760910e-51 | -8.615850e-47 |
| Msa0034200 | Msa0323420 | 0.828405 | 9.154984e-55 | -8.615850e-47 |
| Msa0034200 | Msa0390090 | 0.808137 | 3.590448e-50 | -8.615850e-47 |
| Msa0034200 | Msa0683560 | 0.820671 | 6.064226e-53 | -8.615850e-47 |
| Msa0034200 | Msa1379680 | 0.816995 | 4.148772e-52 | -8.615850e-47 |
| Msa0034200 | Msa1390390 | 0.815661 | 8.246567e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034200 | MtrunA17_Chr1g0195131 | 93.089 | 463 | 2 | 3 | 1 | 433 | 1 | 463 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0034200 | AT2G47510.1 | 79.443 | 467 | 59 | 5 | 1 | 433 | 1 | 464 | 0.0 | 729 |
| Msa0034200 | AT2G47510.2 | 79.443 | 467 | 59 | 5 | 1 | 433 | 1 | 464 | 0.0 | 729 |
| Msa0034200 | AT2G47510.3 | 79.443 | 467 | 59 | 5 | 1 | 433 | 1 | 464 | 0.0 | 729 |
| Msa0034200 | AT5G50950.1 | 80.410 | 439 | 56 | 3 | 26 | 434 | 34 | 472 | 0.0 | 725 |
| Msa0034200 | AT5G50950.2 | 79.864 | 442 | 59 | 3 | 26 | 437 | 34 | 475 | 0.0 | 724 |
| Msa0034200 | AT5G50950.4 | 82.038 | 373 | 47 | 2 | 26 | 378 | 34 | 406 | 0.0 | 636 |
| Msa0034200 | AT5G50950.3 | 80.546 | 293 | 43 | 2 | 159 | 437 | 1 | 293 | 1.18e-169 | 479 |
Find 120 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGTCTGTTCCAGAAAAT+TGG | 0.207895 | 1_1:-62134132 | Msa0034200:intron |
| AGAAAATAAGTTTGAGGCTT+TGG | 0.263915 | 1_1:-62136204 | Msa0034200:intron |
| CGCCATTGAATGAAAGGGTT+TGG | 0.266223 | 1_1:+62139827 | None:intergenic |
| AAGTTCCCTCCGACAAACTA+TGG | 0.275846 | 1_1:-62139686 | Msa0034200:CDS |
| AAATGTGATTTAGGTTAATA+TGG | 0.285361 | 1_1:-62139495 | Msa0034200:intron |
| CTGATACATACGCGGCAAAA+TGG | 0.293648 | 1_1:+62136827 | None:intergenic |
| TGAAAGGGTTTGGATTTAGA+TGG | 0.309027 | 1_1:+62139837 | None:intergenic |
| CCCCTCTTTGTGGGCTGTCT+TGG | 0.317320 | 1_1:+62134086 | None:intergenic |
| AGTGGTCCCCGTTGCGGTCT+TGG | 0.338174 | 1_1:-62135837 | Msa0034200:CDS |
| CAAACTTCTCACCGCGCTTA+TGG | 0.343693 | 1_1:+62138289 | None:intergenic |
| ATTTAGGTTAATATGGAGTA+TGG | 0.344257 | 1_1:-62139488 | Msa0034200:intron |
| GACATATTGACATGGTCATT+TGG | 0.360938 | 1_1:+62138261 | None:intergenic |
| TGATTTCAGGTTTGATGTTA+AGG | 0.366792 | 1_1:-62136273 | Msa0034200:intron |
| GAACCAATCATTCGCTCTTT+CGG | 0.368245 | 1_1:-62139600 | Msa0034200:CDS |
| GAGTTCACCAAGACCGCAAC+GGG | 0.372182 | 1_1:+62135830 | None:intergenic |
| TTTAAAGATATAGTCAAGAT+TGG | 0.374447 | 1_1:-62137070 | Msa0034200:CDS |
| TTTGAAAAGAATTGTGTAAG+AGG | 0.374928 | 1_1:-62134394 | Msa0034200:CDS |
| TATGGTCTTGATCCTACTAT+TGG | 0.380817 | 1_1:-62139470 | Msa0034200:CDS |
| CCAGTGTGAGGCTTTGACTA+TGG | 0.383792 | 1_1:-62135623 | Msa0034200:CDS |
| ACATACTTGCAGGAGATTAC+TGG | 0.388899 | 1_1:+62134958 | None:intergenic |
| ATCCAAACCCTTTCATTCAA+TGG | 0.394338 | 1_1:-62139829 | Msa0034200:exon |
| GAGTGTTGGTGAGGTTGATT+TGG | 0.408411 | 1_1:+62139776 | None:intergenic |
| ACATATTGACATGGTCATTT+GGG | 0.412639 | 1_1:+62138262 | None:intergenic |
| AGAGAAGAACGCGACACATT+CGG | 0.414756 | 1_1:-62139717 | Msa0034200:CDS |
| AAGTGTAGACCCCTCTTTGT+GGG | 0.417422 | 1_1:+62134077 | None:intergenic |
| TGAAGATAGCTAATGATATA+CGG | 0.418067 | 1_1:-62135975 | Msa0034200:intron |
| GCGGCGTCGCGTACCCTGAT+TGG | 0.421476 | 1_1:-62139899 | Msa0034200:five_prime_UTR |
| CATTCTTCCTGAAAACGAAC+CGG | 0.425841 | 1_1:-62135808 | Msa0034200:CDS |
| AAAGAGCGAATGATTGGTTC+AGG | 0.426359 | 1_1:+62139603 | None:intergenic |
| TGGTTCAGGCATACGTTCAC+GGG | 0.428443 | 1_1:+62139617 | None:intergenic |
| AGCATGTAACGTCTTCAAGC+TGG | 0.430909 | 1_1:+62138037 | None:intergenic |
| ACTCTCGGACAGGAGTTTAG+TGG | 0.432184 | 1_1:-62137016 | Msa0034200:CDS |
| ACAGGCATAATACTGCTTCC+CGG | 0.438760 | 1_1:+62135789 | None:intergenic |
| CAAAGAGGGGTCTACACTTA+AGG | 0.440605 | 1_1:-62134073 | Msa0034200:CDS |
| AACAGAGCATCAGAGATTCT+TGG | 0.449221 | 1_1:-62138312 | Msa0034200:CDS |
| TCTTTGCAGAATTTCGATAT+CGG | 0.450065 | 1_1:-62139645 | Msa0034200:CDS |
| AGGTTGATTTGGTTGATAAA+CGG | 0.454648 | 1_1:+62139787 | None:intergenic |
| TTTGTCGGAGGGAACTTGAA+TGG | 0.458116 | 1_1:+62139692 | None:intergenic |
| TTGTGCTCCCCATAGTTTGT+CGG | 0.460721 | 1_1:+62139677 | None:intergenic |
| AACTGCGAAAATGACCAATC+AGG | 0.462669 | 1_1:+62139885 | None:intergenic |
| AACAGCAGAAAATAAGTTTG+AGG | 0.463670 | 1_1:-62136210 | Msa0034200:CDS |
| GGTGGTACCGCTGTAGGGAC+TGG | 0.464029 | 1_1:-62136709 | Msa0034200:CDS |
| CCCTACAGCGGTACCACCCT+GGG | 0.465739 | 1_1:+62136714 | None:intergenic |
| TTAAAGATATAGTCAAGATT+GGG | 0.466945 | 1_1:-62137069 | Msa0034200:CDS |
| TCCCTACAGCGGTACCACCC+TGG | 0.469154 | 1_1:+62136713 | None:intergenic |
| ATGCCGAAAGAGCGAATGAT+TGG | 0.469955 | 1_1:+62139597 | None:intergenic |
| AGAAGCCGCAATTGTGTTGA+GGG | 0.471558 | 1_1:+62136002 | None:intergenic |
| ATCACTGTGGGAGGATCAAA+TGG | 0.471940 | 1_1:-62135016 | Msa0034200:CDS |
| CCCAGGGTGGTACCGCTGTA+GGG | 0.476166 | 1_1:-62136714 | Msa0034200:CDS |
| TAAGTGTAGACCCCTCTTTG+TGG | 0.484224 | 1_1:+62134076 | None:intergenic |
| TTGTCGGAGGGAACTTGAAT+GGG | 0.486821 | 1_1:+62139693 | None:intergenic |
| TAGTTTCAACAAAAGAATCA+TGG | 0.486924 | 1_1:+62136031 | None:intergenic |
| CAGGTGATGCACATTGCCGC+TGG | 0.488981 | 1_1:-62138086 | Msa0034200:CDS |
| GTTACTTGAGCAGCTCGCCC+AGG | 0.494887 | 1_1:-62136731 | Msa0034200:intron |
| TAGCGAAAGGTGAAGAGTGT+TGG | 0.499266 | 1_1:+62139762 | None:intergenic |
| GCATGTAACGTCTTCAAGCT+GGG | 0.501130 | 1_1:+62138038 | None:intergenic |
| GCCCAGGGTGGTACCGCTGT+AGG | 0.504292 | 1_1:-62136715 | Msa0034200:CDS |
| TTGTAGTCAGTGAGACTGCT+TGG | 0.505861 | 1_1:-62134433 | Msa0034200:intron |
| AAGGGTTTGGATTTAGATGG+AGG | 0.507274 | 1_1:+62139840 | None:intergenic |
| TGGATTTAGATGGAGGAGGA+TGG | 0.510935 | 1_1:+62139847 | None:intergenic |
| TTGGTTCAGGCATACGTTCA+CGG | 0.517993 | 1_1:+62139616 | None:intergenic |
| AGTTCCCTCCGACAAACTAT+GGG | 0.522708 | 1_1:-62139685 | Msa0034200:CDS |
| ATCCATGTGCTTCAGGTCAT+GGG | 0.525526 | 1_1:-62135052 | Msa0034200:intron |
| AGGAGATTACTGGCAATCAC+TGG | 0.525641 | 1_1:+62134968 | None:intergenic |
| TCAAAGCCTCACACTGGGTA+GGG | 0.527019 | 1_1:+62135629 | None:intergenic |
| GCCAAGACAGCCCACAAAGA+GGG | 0.529437 | 1_1:-62134087 | Msa0034200:CDS |
| TTTGACTATGGTCTGTGCAC+AGG | 0.531811 | 1_1:-62135611 | Msa0034200:intron |
| GCGTTCTTCTCTGAAGGTAG+TGG | 0.533918 | 1_1:+62139728 | None:intergenic |
| ATAAAGTGCAAGTTGGAAGA+AGG | 0.536251 | 1_1:-62139924 | None:intergenic |
| GTAGAGCGCCATTGAATGAA+AGG | 0.536636 | 1_1:+62139821 | None:intergenic |
| GACTGGATTGAATACAAAGA+AGG | 0.537198 | 1_1:-62136692 | Msa0034200:CDS |
| TGCTCCCCATAGTTTGTCGG+AGG | 0.538083 | 1_1:+62139680 | None:intergenic |
| ATTCTTCCTGAAAACGAACC+GGG | 0.540749 | 1_1:-62135807 | Msa0034200:CDS |
| GGTTTGGATTTAGATGGAGG+AGG | 0.543617 | 1_1:+62139843 | None:intergenic |
| CCAGTTTGCCAAACAACAAG+AGG | 0.545038 | 1_1:+62139389 | None:intergenic |
| AACTCCTGTCCGAGAGTCAA+AGG | 0.546922 | 1_1:+62137022 | None:intergenic |
| TAGAGCGCCATTGAATGAAA+GGG | 0.552157 | 1_1:+62139822 | None:intergenic |
| ACATGCTACACTTGACGCAA+AGG | 0.553349 | 1_1:-62138021 | Msa0034200:intron |
| ACTGGATTGAATACAAAGAA+GGG | 0.553830 | 1_1:-62136691 | Msa0034200:CDS |
| TTACTTGAGCAGCTCGCCCA+GGG | 0.555935 | 1_1:-62136730 | Msa0034200:intron |
| AAGAAGCCGCAATTGTGTTG+AGG | 0.559590 | 1_1:+62136001 | None:intergenic |
| TATTGGAAAAGCGATAATGA+AGG | 0.568181 | 1_1:-62139453 | Msa0034200:CDS |
| GATGCTACACCTTTGACTCT+CGG | 0.573763 | 1_1:-62137031 | Msa0034200:CDS |
| TACACCTTTGACTCTCGGAC+AGG | 0.574266 | 1_1:-62137026 | Msa0034200:CDS |
| TATTGTAGTGGTCCCCGTTG+CGG | 0.574571 | 1_1:-62135843 | Msa0034200:intron |
| CCATAGTCAAAGCCTCACAC+TGG | 0.578285 | 1_1:+62135623 | None:intergenic |
| CCAGAAAATTGGTTATGACA+AGG | 0.581218 | 1_1:-62134121 | Msa0034200:intron |
| ACTGCGAAAATGACCAATCA+GGG | 0.581494 | 1_1:+62139886 | None:intergenic |
| AGTTTCAACAAAAGAATCAT+GGG | 0.582078 | 1_1:+62136032 | None:intergenic |
| CTCCCACAGTGATTGCAACA+TGG | 0.583709 | 1_1:+62135026 | None:intergenic |
| TTGCAGAATTTCGATATCGG+TGG | 0.597454 | 1_1:-62139642 | Msa0034200:CDS |
| AACCATGTTGCAATCACTGT+GGG | 0.603033 | 1_1:-62135028 | Msa0034200:CDS |
| GGTGTCACTAGCAGTAGCTA+CGG | 0.604141 | 1_1:-62136252 | Msa0034200:CDS |
| CCAAGACAGCCCACAAAGAG+GGG | 0.609646 | 1_1:-62134086 | Msa0034200:CDS |
| CATAGTCAAAGCCTCACACT+GGG | 0.612690 | 1_1:+62135624 | None:intergenic |
| TGTGTCGCGTTCTTCTCTGA+AGG | 0.614865 | 1_1:+62139722 | None:intergenic |
| GCTGCGCAAGAAGTTGCTGA+TGG | 0.620565 | 1_1:-62139431 | Msa0034200:CDS |
| GTCAAAGCCTCACACTGGGT+AGG | 0.622924 | 1_1:+62135628 | None:intergenic |
| GCTCCCCATAGTTTGTCGGA+GGG | 0.625414 | 1_1:+62139681 | None:intergenic |
| AATTTCAAAGCTATTGCATG+AGG | 0.628115 | 1_1:-62134350 | Msa0034200:intron |
| TGCAAGTTGGAAGAAGGCTG+CGG | 0.629514 | 1_1:-62139918 | None:intergenic |
| TGAGTTCACCAAGACCGCAA+CGG | 0.629734 | 1_1:+62135829 | None:intergenic |
| CATGTTGCAATCACTGTGGG+AGG | 0.630135 | 1_1:-62135025 | Msa0034200:CDS |
| GGTTGATGAGAAGTAGCGAA+AGG | 0.630747 | 1_1:+62139749 | None:intergenic |
| TGAGTTTATTTCAGTTCCAG+CGG | 0.637139 | 1_1:+62138070 | None:intergenic |
| TGCCAAGACAGCCCACAAAG+AGG | 0.639329 | 1_1:-62134088 | Msa0034200:CDS |
| TGGAGCCCTCAACACAATTG+CGG | 0.643391 | 1_1:-62136007 | Msa0034200:CDS |
| CATGTAACGTCTTCAAGCTG+GGG | 0.648325 | 1_1:+62138039 | None:intergenic |
| CTGGATTGAATACAAAGAAG+GGG | 0.651884 | 1_1:-62136690 | Msa0034200:intron |
| AAAGGTGAAGAGTGTTGGTG+AGG | 0.652729 | 1_1:+62139767 | None:intergenic |
| CTTGAGCAGCTCGCCCAGGG+TGG | 0.654435 | 1_1:-62136727 | Msa0034200:intron |
| GAGATTCTTGGCCATAAGCG+CGG | 0.655787 | 1_1:-62138300 | Msa0034200:CDS |
| GGTTAACCCTACCCAGTGTG+AGG | 0.656472 | 1_1:-62135635 | Msa0034200:CDS |
| AAGATTGTGACATATTGACA+TGG | 0.707630 | 1_1:+62138253 | None:intergenic |
| GTTCCCTCCGACAAACTATG+GGG | 0.713948 | 1_1:-62139684 | Msa0034200:CDS |
| GGTTCAGGCATACGTTCACG+GGG | 0.718163 | 1_1:+62139618 | None:intergenic |
| ATTCAATCCAGTCCCTACAG+CGG | 0.740412 | 1_1:+62136702 | None:intergenic |
| TGTCAAACCTGATACATACG+CGG | 0.760394 | 1_1:+62136819 | None:intergenic |
| AAACCATGTTGCAATCACTG+TGG | 0.768207 | 1_1:-62135029 | Msa0034200:CDS |
| AGTTCACCAAGACCGCAACG+GGG | 0.813827 | 1_1:+62135831 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATAAATACAAAAAC+AGG | + | chr1_1:62134611-62134630 | None:intergenic | 10.0% |
| !! | TTAACTTAAAAAAGTAAATT+TGG | - | chr1_1:62137609-62137628 | Msa0034200:intron | 10.0% |
| !!! | AAACTTTCTTATTTCATAAT+AGG | + | chr1_1:62135568-62135587 | None:intergenic | 15.0% |
| !! | TAAATATAAATGGGATTTAA+TGG | - | chr1_1:62136214-62136233 | Msa0034200:CDS | 15.0% |
| !! | ATATATTATATAAAGTCAGA+TGG | - | chr1_1:62139189-62139208 | Msa0034200:intron | 15.0% |
| !!! | AAATGTGATTTAGGTTAATA+TGG | - | chr1_1:62134433-62134452 | Msa0034200:intron | 20.0% |
| !! | AATAAATACAAAAACAGGAT+AGG | + | chr1_1:62134606-62134625 | None:intergenic | 20.0% |
| !! | AAGTACTTATCAAAATGTTT+CGG | - | chr1_1:62134666-62134685 | Msa0034200:intron | 20.0% |
| !! | TCTTTATTGTATATCATAGA+TGG | - | chr1_1:62135431-62135450 | Msa0034200:intron | 20.0% |
| !!! | AGAAAACTGAAACAAATTTT+TGG | - | chr1_1:62135973-62135992 | Msa0034200:intron | 20.0% |
| !! | AAATTGTAACTTTCATACAA+AGG | + | chr1_1:62136031-62136050 | None:intergenic | 20.0% |
| !! | AAAACCGGATTAAATATAAA+TGG | - | chr1_1:62136204-62136223 | Msa0034200:intron | 20.0% |
| !! | AAACCGGATTAAATATAAAT+GGG | - | chr1_1:62136205-62136224 | Msa0034200:CDS | 20.0% |
| !! | AATCCCATTTATATTTAATC+CGG | + | chr1_1:62136211-62136230 | None:intergenic | 20.0% |
| !!! | TTGCATGATTAATTATTTTC+TGG | - | chr1_1:62136548-62136567 | Msa0034200:intron | 20.0% |
| !!! | TAAGATGGAATTTTATAAAC+TGG | - | chr1_1:62136714-62136733 | Msa0034200:CDS | 20.0% |
| !! | TATCTTTAAATTCAATTGAC+TGG | + | chr1_1:62136848-62136867 | None:intergenic | 20.0% |
| !! | TTTAAAGATATAGTCAAGAT+TGG | - | chr1_1:62136858-62136877 | Msa0034200:CDS | 20.0% |
| !! | TTAAAGATATAGTCAAGATT+GGG | - | chr1_1:62136859-62136878 | Msa0034200:intron | 20.0% |
| !!! | TGTTTGGCTTTAAATTATAA+TGG | - | chr1_1:62137461-62137480 | Msa0034200:intron | 20.0% |
| !! | TGTAGAAAACAATTCTTTAA+TGG | - | chr1_1:62138044-62138063 | Msa0034200:CDS | 20.0% |
| !! | GTAGAAAACAATTCTTTAAT+GGG | - | chr1_1:62138045-62138064 | Msa0034200:CDS | 20.0% |
| !! | ACTGTATTATTCAATATTCA+AGG | + | chr1_1:62138749-62138768 | None:intergenic | 20.0% |
| !!! | TATATCCTTGATTTTAGTTT+TGG | - | chr1_1:62138803-62138822 | Msa0034200:intron | 20.0% |
| !! | ATTTATAAATCATGCAAACA+AGG | - | chr1_1:62139029-62139048 | Msa0034200:intron | 20.0% |
| !! | ATAGTATATATGCATATACA+TGG | - | chr1_1:62139336-62139355 | Msa0034200:intron | 20.0% |
| !! | TATTCCATATTGCATAAATT+TGG | + | chr1_1:62139433-62139452 | None:intergenic | 20.0% |
| ! | TGATTGATGAAATGTGATTT+AGG | - | chr1_1:62134424-62134443 | Msa0034200:CDS | 25.0% |
| !! | ATTTAGGTTAATATGGAGTA+TGG | - | chr1_1:62134440-62134459 | Msa0034200:intron | 25.0% |
| !! | AGAACTTGAATTTGATTTCT+AGG | - | chr1_1:62134787-62134806 | Msa0034200:intron | 25.0% |
| ! | TAACACCAAAAAGAATCTAT+TGG | - | chr1_1:62134895-62134914 | Msa0034200:intron | 25.0% |
| !! | TTATGCCAATAGATTCTTTT+TGG | + | chr1_1:62134903-62134922 | None:intergenic | 25.0% |
| !! | ATTAAGTTGCTTATCTAAAC+AGG | - | chr1_1:62135133-62135152 | Msa0034200:intron | 25.0% |
| !!! | TTCTTATTGATCACTTTTTG+TGG | - | chr1_1:62135760-62135779 | Msa0034200:intron | 25.0% |
| ! | GAAATAAGAAACAGTTTACA+AGG | + | chr1_1:62135795-62135814 | None:intergenic | 25.0% |
| !! | TACAATTTAGCAATTTTGTG+TGG | - | chr1_1:62136043-62136062 | Msa0034200:intron | 25.0% |
| !! | TTTCTTAGTTTGAAATGGTT+TGG | + | chr1_1:62136187-62136206 | None:intergenic | 25.0% |
| ! | TGTAGTGATAATATCAGAAT+TGG | + | chr1_1:62136501-62136520 | None:intergenic | 25.0% |
| !!! | TTAATTATTTTCTGGTCTTG+TGG | - | chr1_1:62136556-62136575 | Msa0034200:intron | 25.0% |
| ! | TCCAAATAATATATTGTGAC+AGG | - | chr1_1:62136638-62136657 | Msa0034200:intron | 25.0% |
| ! | TCCTGTCACAATATATTATT+TGG | + | chr1_1:62136642-62136661 | None:intergenic | 25.0% |
| ! | AAAATTTCATGAAAGTTACG+AGG | + | chr1_1:62136678-62136697 | None:intergenic | 25.0% |
| !!! | TACTTTCATTTGGTTTTTGA+TGG | - | chr1_1:62136955-62136974 | Msa0034200:intron | 25.0% |
| ! | ATCGAATAAAATATGCCAAA+AGG | + | chr1_1:62137349-62137368 | None:intergenic | 25.0% |
| ! | CATCATATACCTAAAAGTAA+TGG | - | chr1_1:62137403-62137422 | Msa0034200:intron | 25.0% |
| ! | AAGATCTTATGGATATGATA+TGG | - | chr1_1:62137519-62137538 | Msa0034200:intron | 25.0% |
| ! | AGATCTTATGGATATGATAT+GGG | - | chr1_1:62137520-62137539 | Msa0034200:intron | 25.0% |
| !!! | TGTTTTTTTTCAGCTTAAAC+AGG | + | chr1_1:62137581-62137600 | None:intergenic | 25.0% |
| ! | AAGCTGAAAAAAAACATTTG+TGG | - | chr1_1:62137585-62137604 | Msa0034200:intron | 25.0% |
| !! | TTATTTTCTGCTGTTACAAA+GGG | + | chr1_1:62137713-62137732 | None:intergenic | 25.0% |
| ! | AGTTTCAACAAAAGAATCAT+GGG | + | chr1_1:62137899-62137918 | None:intergenic | 25.0% |
| ! | TAGTTTCAACAAAAGAATCA+TGG | + | chr1_1:62137900-62137919 | None:intergenic | 25.0% |
| ! | TGAAGATAGCTAATGATATA+CGG | - | chr1_1:62137953-62137972 | Msa0034200:intron | 25.0% |
| ! | TATAAAAGCAATTTGTCAGT+TGG | + | chr1_1:62138006-62138025 | None:intergenic | 25.0% |
| ! | TGAATTCTATCTTATTGTAG+TGG | - | chr1_1:62138073-62138092 | Msa0034200:CDS | 25.0% |
| ! | ATGTATATTAAGTAAGCATG+AGG | + | chr1_1:62138170-62138189 | None:intergenic | 25.0% |
| ! | GCTAACAAAATAATAAGCTA+TGG | + | chr1_1:62138222-62138241 | None:intergenic | 25.0% |
| !!! | TATTTTGTTAGCCTTAGAAT+TGG | - | chr1_1:62138230-62138249 | Msa0034200:intron | 25.0% |
| !!! | ATTTTGTTAGCCTTAGAATT+GGG | - | chr1_1:62138231-62138250 | Msa0034200:intron | 25.0% |
| ! | GTTACGCAATTTGAATTATA+TGG | - | chr1_1:62138425-62138444 | Msa0034200:intron | 25.0% |
| ! | TGAATTATATGGTTGCTAAT+AGG | - | chr1_1:62138436-62138455 | Msa0034200:intron | 25.0% |
| ! | GAATTATATGGTTGCTAATA+GGG | - | chr1_1:62138437-62138456 | Msa0034200:intron | 25.0% |
| !!! | AAGATTTTTTAGCATAAAGC+TGG | - | chr1_1:62138660-62138679 | Msa0034200:intron | 25.0% |
| !!! | AGATTTTTTAGCATAAAGCT+GGG | - | chr1_1:62138661-62138680 | Msa0034200:intron | 25.0% |
| ! | AAATCAAGGATATAATTGCA+AGG | + | chr1_1:62138797-62138816 | None:intergenic | 25.0% |
| !!! | TGGATTTATCTTCTTTTTTG+GGG | + | chr1_1:62139367-62139386 | None:intergenic | 25.0% |
| !!! | CTGGATTTATCTTCTTTTTT+GGG | + | chr1_1:62139368-62139387 | None:intergenic | 25.0% |
| ! | GATTCCAAATTTATGCAATA+TGG | - | chr1_1:62139426-62139445 | Msa0034200:CDS | 25.0% |
| ! | AGCATTTAAGTACATCTTTA+AGG | + | chr1_1:62139456-62139475 | None:intergenic | 25.0% |
| !! | TCTTACACAATTCTTTTCAA+AGG | + | chr1_1:62139535-62139554 | None:intergenic | 25.0% |
| ! | TTTGAAAAGAATTGTGTAAG+AGG | - | chr1_1:62139534-62139553 | Msa0034200:intron | 25.0% |
| ! | ACAGAAAAACAAGAATAACT+AGG | + | chr1_1:62139892-62139911 | None:intergenic | 25.0% |
| !! | AGGTTGATTTGGTTGATAAA+CGG | + | chr1_1:62134144-62134163 | None:intergenic | 30.0% |
| TCTTTGCAGAATTTCGATAT+CGG | - | chr1_1:62134283-62134302 | Msa0034200:intron | 30.0% | |
| !! | ATTATCGCTTTTCCAATAGT+AGG | + | chr1_1:62134473-62134492 | None:intergenic | 30.0% |
| TATTGGAAAAGCGATAATGA+AGG | - | chr1_1:62134475-62134494 | Msa0034200:intron | 30.0% | |
| !!! | ATCATTTTCCTCTTGTTGTT+TGG | - | chr1_1:62134531-62134550 | Msa0034200:intron | 30.0% |
| AAGTAACATGAATGCTAATG+AGG | - | chr1_1:62134574-62134593 | Msa0034200:intron | 30.0% | |
| CACCAAATGATGAATTGTTT+GGG | - | chr1_1:62134764-62134783 | Msa0034200:intron | 30.0% | |
| ! | ACTTGAATTTGATTTCTAGG+TGG | - | chr1_1:62134790-62134809 | Msa0034200:intron | 30.0% |
| ! | TTTCTAGGTGGAACAATTTT+TGG | - | chr1_1:62134802-62134821 | Msa0034200:intron | 30.0% |
| TAAATACTTGTGAGACTGTT+TGG | - | chr1_1:62134920-62134939 | Msa0034200:intron | 30.0% | |
| AAATACTTGTGAGACTGTTT+GGG | - | chr1_1:62134921-62134940 | Msa0034200:intron | 30.0% | |
| GAGCTTATAAAAATAGCCAT+TGG | - | chr1_1:62134945-62134964 | Msa0034200:intron | 30.0% | |
| ATAGCTTATATGAGAGTAGT+TGG | - | chr1_1:62135032-62135051 | Msa0034200:CDS | 30.0% | |
| ! | AATAGTACTGAGAGTACATT+TGG | + | chr1_1:62135310-62135329 | None:intergenic | 30.0% |
| ! | AATCTAAGATCCTTAAACGT+GGG | + | chr1_1:62135380-62135399 | None:intergenic | 30.0% |
| ! | TAATCTAAGATCCTTAAACG+TGG | + | chr1_1:62135381-62135400 | None:intergenic | 30.0% |
| ! | TTTGTGTTTGAACTCTTTTC+AGG | - | chr1_1:62135585-62135604 | Msa0034200:intron | 30.0% |
| ACATATTGACATGGTCATTT+GGG | + | chr1_1:62135669-62135688 | None:intergenic | 30.0% | |
| AAGATTGTGACATATTGACA+TGG | + | chr1_1:62135678-62135697 | None:intergenic | 30.0% | |
| CCATTTCAAACTAAGAAAAC+CGG | - | chr1_1:62136189-62136208 | Msa0034200:intron | 30.0% | |
| ATAAATGGGATTTAATGGTC+AGG | - | chr1_1:62136219-62136238 | Msa0034200:CDS | 30.0% | |
| ATAAATGTGAAAATCATGCC+AGG | - | chr1_1:62136420-62136439 | Msa0034200:intron | 30.0% | |
| AATTAATCATGCAAGTTGCA+AGG | + | chr1_1:62136542-62136561 | None:intergenic | 30.0% | |
| TAGTCAAGACACTGATAAAT+GGG | + | chr1_1:62136773-62136792 | None:intergenic | 30.0% | |
| ATAGTCAAGACACTGATAAA+TGG | + | chr1_1:62136774-62136793 | None:intergenic | 30.0% | |
| CAAGTAAGCTTACTTTCATT+TGG | - | chr1_1:62136945-62136964 | Msa0034200:intron | 30.0% | |
| GTAAAATCATGACAGTTTGT+GGG | - | chr1_1:62137016-62137035 | Msa0034200:CDS | 30.0% | |
| TATACTTCAGCTGTCAATAA+AGG | + | chr1_1:62137063-62137082 | None:intergenic | 30.0% | |
| ACTGGATTGAATACAAAGAA+GGG | - | chr1_1:62137237-62137256 | Msa0034200:intron | 30.0% | |
| ! | AGACGCTATAACTTTCATTT+TGG | + | chr1_1:62137315-62137334 | None:intergenic | 30.0% |
| TGATAGTAAGAAACAATTGC+CGG | + | chr1_1:62137385-62137404 | None:intergenic | 30.0% | |
| !! | CTAAAAGTAATGGACTCTAT+CGG | - | chr1_1:62137413-62137432 | Msa0034200:intron | 30.0% |
| ATCATAAAAATCGATGTGCT+AGG | - | chr1_1:62137551-62137570 | Msa0034200:intron | 30.0% | |
| ! | GTTAAACAGTGATAATTTGC+TGG | - | chr1_1:62137631-62137650 | Msa0034200:intron | 30.0% |
| !! | ATAATTTGCTGGATGATTTC+AGG | - | chr1_1:62137642-62137661 | Msa0034200:intron | 30.0% |
| !! | TGATTTCAGGTTTGATGTTA+AGG | - | chr1_1:62137655-62137674 | Msa0034200:intron | 30.0% |
| !! | CTTATTTTCTGCTGTTACAA+AGG | + | chr1_1:62137714-62137733 | None:intergenic | 30.0% |
| AACAGCAGAAAATAAGTTTG+AGG | - | chr1_1:62137718-62137737 | Msa0034200:intron | 30.0% | |
| ! | AGAAAATAAGTTTGAGGCTT+TGG | - | chr1_1:62137724-62137743 | Msa0034200:intron | 30.0% |
| ! | GATTCTTTTGTTGAAACTAG+TGG | - | chr1_1:62137901-62137920 | Msa0034200:intron | 30.0% |
| GCTAATGATATACGGTTATT+AGG | - | chr1_1:62137961-62137980 | Msa0034200:intron | 30.0% | |
| ATGATATACGGTTATTAGGA+AGG | - | chr1_1:62137965-62137984 | Msa0034200:intron | 30.0% | |
| TGAATCAAATCCCAATTCTA+AGG | + | chr1_1:62138244-62138263 | None:intergenic | 30.0% | |
| CAAAAAGAAACAGAACAAGA+TGG | - | chr1_1:62138526-62138545 | Msa0034200:intron | 30.0% | |
| !!! | TCCTTGATTTTAGTTTTGGT+TGG | - | chr1_1:62138807-62138826 | Msa0034200:intron | 30.0% |
| CAGAAATTTAGTCACTGTTA+AGG | + | chr1_1:62138843-62138862 | None:intergenic | 30.0% | |
| ! | TATATAAAGTCAGATGGACT+TGG | - | chr1_1:62139195-62139214 | Msa0034200:intron | 30.0% |
| TATGTTGGCAAAGTAGAAAA+TGG | - | chr1_1:62139243-62139262 | Msa0034200:intron | 30.0% | |
| ATGTTGGCAAAGTAGAAAAT+GGG | - | chr1_1:62139244-62139263 | Msa0034200:intron | 30.0% | |
| CAGATATGTTGTGTTTGTTT+AGG | - | chr1_1:62139281-62139300 | Msa0034200:intron | 30.0% | |
| !!! | CCTGGATTTATCTTCTTTTT+TGG | + | chr1_1:62139369-62139388 | None:intergenic | 30.0% |
| CCAAAAAAGAAGATAAATCC+AGG | - | chr1_1:62139366-62139385 | Msa0034200:intron | 30.0% | |
| AATTTCAAAGCTATTGCATG+AGG | - | chr1_1:62139578-62139597 | Msa0034200:CDS | 30.0% | |
| CAACAACATGCATTAGATAA+GGG | + | chr1_1:62139657-62139676 | None:intergenic | 30.0% | |
| ACAACAACATGCATTAGATA+AGG | + | chr1_1:62139658-62139677 | None:intergenic | 30.0% | |
| ATTTGTCTGTTCCAGAAAAT+TGG | - | chr1_1:62139796-62139815 | Msa0034200:CDS | 30.0% | |
| TGAAAGGGTTTGGATTTAGA+TGG | + | chr1_1:62134094-62134113 | None:intergenic | 35.0% | |
| ATCCAAACCCTTTCATTCAA+TGG | - | chr1_1:62134099-62134118 | Msa0034200:CDS | 35.0% | |
| ! | TATGGTCTTGATCCTACTAT+TGG | - | chr1_1:62134458-62134477 | Msa0034200:intron | 35.0% |
| CCAAACAATTCATCATTTGG+TGG | + | chr1_1:62134766-62134785 | None:intergenic | 35.0% | |
| CCACCAAATGATGAATTGTT+TGG | - | chr1_1:62134763-62134782 | Msa0034200:intron | 35.0% | |
| CTCCCAAACAATTCATCATT+TGG | + | chr1_1:62134769-62134788 | None:intergenic | 35.0% | |
| CTTATTTCCATAAGCTTTGC+AGG | - | chr1_1:62134989-62135008 | Msa0034200:CDS | 35.0% | |
| AAACTATCCTGCAAAGCTTA+TGG | + | chr1_1:62134999-62135018 | None:intergenic | 35.0% | |
| ACAGCATATACACATGACAT+GGG | + | chr1_1:62135160-62135179 | None:intergenic | 35.0% | |
| ! | CATAACTAGACCTTCAAGTT+CGG | + | chr1_1:62135344-62135363 | None:intergenic | 35.0% |
| ATTATTATGCCCCACGTTTA+AGG | - | chr1_1:62135367-62135386 | Msa0034200:intron | 35.0% | |
| ! | ATCTAAGATCCTTAAACGTG+GGG | + | chr1_1:62135379-62135398 | None:intergenic | 35.0% |
| !! | TTCCCAGTTTCTGTTTTGTT+TGG | - | chr1_1:62135486-62135505 | Msa0034200:intron | 35.0% |
| GTCCAAACAAAACAGAAACT+GGG | + | chr1_1:62135491-62135510 | None:intergenic | 35.0% | |
| TGTCCAAACAAAACAGAAAC+TGG | + | chr1_1:62135492-62135511 | None:intergenic | 35.0% | |
| GACATATTGACATGGTCATT+TGG | + | chr1_1:62135670-62135689 | None:intergenic | 35.0% | |
| ATGTACAAACGACTTACAGT+TGG | + | chr1_1:62135715-62135734 | None:intergenic | 35.0% | |
| ! | ATGTTTGTTTCTCTCTTTCC+AGG | - | chr1_1:62135823-62135842 | Msa0034200:CDS | 35.0% |
| TGAGTTTATTTCAGTTCCAG+CGG | + | chr1_1:62135861-62135880 | None:intergenic | 35.0% | |
| !! | GCAATGAAAGTTGATGGTAT+CGG | + | chr1_1:62136001-62136020 | None:intergenic | 35.0% |
| ACTTTCATACAAAGGATCAC+AGG | + | chr1_1:62136023-62136042 | None:intergenic | 35.0% | |
| GAATGTCTAATGTCTCTATC+TGG | - | chr1_1:62136117-62136136 | Msa0034200:intron | 35.0% | |
| !! | CCGGTTTTCTTAGTTTGAAA+TGG | + | chr1_1:62136192-62136211 | None:intergenic | 35.0% |
| !!! | ATTTTCTGGTCTTGTGGTTT+TGG | - | chr1_1:62136562-62136581 | Msa0034200:intron | 35.0% |
| ! | CTTTCTTGCAATGTTCCTTT+TGG | - | chr1_1:62136591-62136610 | Msa0034200:intron | 35.0% |
| TGCATACATGATAGACCAAA+AGG | + | chr1_1:62136609-62136628 | None:intergenic | 35.0% | |
| ! | CTTTCTCTTAGTCTCTAAGA+TGG | - | chr1_1:62136699-62136718 | Msa0034200:CDS | 35.0% |
| ACACTGATAAATGGGATCTA+AGG | + | chr1_1:62136765-62136784 | None:intergenic | 35.0% | |
| ! | TTTTACGAAGCGTACTAATG+AGG | + | chr1_1:62137002-62137021 | None:intergenic | 35.0% |
| CGTAAAATCATGACAGTTTG+TGG | - | chr1_1:62137015-62137034 | Msa0034200:CDS | 35.0% | |
| GACTGGATTGAATACAAAGA+AGG | - | chr1_1:62137236-62137255 | Msa0034200:intron | 35.0% | |
| CTGGATTGAATACAAAGAAG+GGG | - | chr1_1:62137238-62137257 | Msa0034200:intron | 35.0% | |
| ! | GTCTTTCTTTTCACTCCTTT+TGG | - | chr1_1:62137331-62137350 | Msa0034200:intron | 35.0% |
| ! | TTCGATATGAGCTTTTTGTC+CGG | - | chr1_1:62137363-62137382 | Msa0034200:intron | 35.0% |
| !! | CGATAGAGTCCATTACTTTT+AGG | + | chr1_1:62137415-62137434 | None:intergenic | 35.0% |
| ! | GCATGTGCATTTTTCATGTT+TGG | - | chr1_1:62137445-62137464 | Msa0034200:intron | 35.0% |
| ! | CATTTTCGCTGAAGATCTTA+TGG | - | chr1_1:62137508-62137527 | Msa0034200:intron | 35.0% |
| TTCCTTGTCTTTAATCTGTC+TGG | - | chr1_1:62137769-62137788 | Msa0034200:intron | 35.0% | |
| CACAACCTTATTCTGTTTCA+GGG | - | chr1_1:62138267-62138286 | Msa0034200:CDS | 35.0% | |
| ACAACCTTATTCTGTTTCAG+GGG | - | chr1_1:62138268-62138287 | Msa0034200:CDS | 35.0% | |
| ! | AGTGTGTCGTTAGTAGTATT+AGG | - | chr1_1:62138609-62138628 | Msa0034200:intron | 35.0% |
| GCCAACCAAAACTAAAATCA+AGG | + | chr1_1:62138811-62138830 | None:intergenic | 35.0% | |
| AGGATATGAAACATACTTGC+AGG | + | chr1_1:62138983-62139002 | None:intergenic | 35.0% | |
| !!! | CTTCTAGCTAGGTTTTAACT+TGG | - | chr1_1:62139054-62139073 | Msa0034200:intron | 35.0% |
| ATGTTACCTTACCTGATTCT+AGG | - | chr1_1:62139084-62139103 | Msa0034200:intron | 35.0% | |
| GTTTACATCAACCTAGAATC+AGG | + | chr1_1:62139098-62139117 | None:intergenic | 35.0% | |
| TATGTCTTTGTGATGACATG+TGG | - | chr1_1:62139311-62139330 | Msa0034200:intron | 35.0% | |
| GAATCAAAACAAAAGCCAAC+AGG | + | chr1_1:62139411-62139430 | None:intergenic | 35.0% | |
| ACATGCATTAGATAAGGGTT+TGG | + | chr1_1:62139652-62139671 | None:intergenic | 35.0% | |
| ! | CCTTGTCATAACCAATTTTC+TGG | + | chr1_1:62139810-62139829 | None:intergenic | 35.0% |
| CCAGAAAATTGGTTATGACA+AGG | - | chr1_1:62139807-62139826 | Msa0034200:CDS | 35.0% | |
| ACTGCGAAAATGACCAATCA+GGG | + | chr1_1:62134045-62134064 | None:intergenic | 40.0% | |
| AACTGCGAAAATGACCAATC+AGG | + | chr1_1:62134046-62134065 | None:intergenic | 40.0% | |
| AAGGGTTTGGATTTAGATGG+AGG | + | chr1_1:62134091-62134110 | None:intergenic | 40.0% | |
| ! | TAGAGCGCCATTGAATGAAA+GGG | + | chr1_1:62134109-62134128 | None:intergenic | 40.0% |
| TTGCAGAATTTCGATATCGG+TGG | - | chr1_1:62134286-62134305 | Msa0034200:intron | 40.0% | |
| ! | AAAGAGCGAATGATTGGTTC+AGG | + | chr1_1:62134328-62134347 | None:intergenic | 40.0% |
| GAACCAATCATTCGCTCTTT+CGG | - | chr1_1:62134328-62134347 | Msa0034200:intron | 40.0% | |
| CTTGAAAAAATGCGCTGCTA+AGG | - | chr1_1:62134354-62134373 | Msa0034200:CDS | 40.0% | |
| !!! | AGGTGGAACAATTTTTGGCT+AGG | - | chr1_1:62134807-62134826 | Msa0034200:intron | 40.0% |
| TGGTAATCCAGAGTTCAATC+CGG | + | chr1_1:62134846-62134865 | None:intergenic | 40.0% | |
| GATTGAACTCTGGATTACCA+GGG | - | chr1_1:62134846-62134865 | Msa0034200:intron | 40.0% | |
| TCTTTCCCTTAGTAACTGGA+GGG | - | chr1_1:62134871-62134890 | Msa0034200:intron | 40.0% | |
| GTTAACCCTCCAGTTACTAA+GGG | + | chr1_1:62134879-62134898 | None:intergenic | 40.0% | |
| TGTTAACCCTCCAGTTACTA+AGG | + | chr1_1:62134880-62134899 | None:intergenic | 40.0% | |
| AACAGCTTATGACATGCCAA+TGG | + | chr1_1:62134964-62134983 | None:intergenic | 40.0% | |
| GACAGCATATACACATGACA+TGG | + | chr1_1:62135161-62135180 | None:intergenic | 40.0% | |
| GTACTCTCAGTACTATTGTG+TGG | - | chr1_1:62135313-62135332 | Msa0034200:intron | 40.0% | |
| CAGTGATCAAATGGATGGAA+CGG | + | chr1_1:62135539-62135558 | None:intergenic | 40.0% | |
| ! | AACAGAGCATCAGAGATTCT+TGG | - | chr1_1:62135616-62135635 | Msa0034200:CDS | 40.0% |
| TCACAGGCAATGAAAGTTGA+TGG | + | chr1_1:62136007-62136026 | None:intergenic | 40.0% | |
| ! | AATTTTGTGTGGTTGCCTGA+GGG | - | chr1_1:62136054-62136073 | Msa0034200:intron | 40.0% |
| AGGGTATAAGACTTCTGACA+CGG | - | chr1_1:62136073-62136092 | Msa0034200:intron | 40.0% | |
| !! | TGAAATGGTTTGGTCAATCG+TGG | + | chr1_1:62136177-62136196 | None:intergenic | 40.0% |
| ! | TAGCATGAAAGAAGCATGTC+AGG | + | chr1_1:62136370-62136389 | None:intergenic | 40.0% |
| AGGTGAATAGCATGTTAACC+TGG | + | chr1_1:62136441-62136460 | None:intergenic | 40.0% | |
| CACCTAACCTGTTCTTCTTA+TGG | - | chr1_1:62136456-62136475 | Msa0034200:intron | 40.0% | |
| AGCCATAAGAAGAACAGGTT+AGG | + | chr1_1:62136461-62136480 | None:intergenic | 40.0% | |
| TTATCACTACATGTCTCCCT+TGG | - | chr1_1:62136510-62136529 | Msa0034200:intron | 40.0% | |
| AGTTGCAAGGATTCAACCAA+GGG | + | chr1_1:62136529-62136548 | None:intergenic | 40.0% | |
| AAGTTGCAAGGATTCAACCA+AGG | + | chr1_1:62136530-62136549 | None:intergenic | 40.0% | |
| AAATCATGACAGTTTGTGGG+AGG | - | chr1_1:62137019-62137038 | Msa0034200:CDS | 40.0% | |
| AATCATGACAGTTTGTGGGA+GGG | - | chr1_1:62137020-62137039 | Msa0034200:CDS | 40.0% | |
| TGTCAAACCTGATACATACG+CGG | + | chr1_1:62137112-62137131 | None:intergenic | 40.0% | |
| GTTCTTCACCTGTATGATTC+TGG | - | chr1_1:62137156-62137175 | Msa0034200:intron | 40.0% | |
| TCAGAACTCCAGAATCATAC+AGG | + | chr1_1:62137167-62137186 | None:intergenic | 40.0% | |
| AAAACAAGCGCTTAGCAATC+AGG | + | chr1_1:62137275-62137294 | None:intergenic | 40.0% | |
| CACCAGACAGATTAAAGACA+AGG | + | chr1_1:62137774-62137793 | None:intergenic | 40.0% | |
| ! | CGTTCGTATTCTCCATTTTC+AGG | - | chr1_1:62137870-62137889 | Msa0034200:intron | 40.0% |
| CATTCTTCCTGAAAACGAAC+CGG | - | chr1_1:62138120-62138139 | Msa0034200:intron | 40.0% | |
| ATTCTTCCTGAAAACGAACC+GGG | - | chr1_1:62138121-62138140 | Msa0034200:intron | 40.0% | |
| AGTAAGCATGAGGTTCTTAC+AGG | + | chr1_1:62138160-62138179 | None:intergenic | 40.0% | |
| CCTGAAACAGAATAAGGTTG+TGG | + | chr1_1:62138269-62138288 | None:intergenic | 40.0% | |
| CCACAACCTTATTCTGTTTC+AGG | - | chr1_1:62138266-62138285 | Msa0034200:CDS | 40.0% | |
| TTGCTAATAGGGTCCATGAT+AGG | - | chr1_1:62138448-62138467 | Msa0034200:intron | 40.0% | |
| TGCTAATAGGGTCCATGATA+GGG | - | chr1_1:62138449-62138468 | Msa0034200:intron | 40.0% | |
| AGCTAGTTATGTTAGTGAGG+TGG | - | chr1_1:62138565-62138584 | Msa0034200:intron | 40.0% | |
| !! | AGGTGGTTGAAGTTTGTTAG+AGG | - | chr1_1:62138582-62138601 | Msa0034200:intron | 40.0% |
| ! | GTGTCGTTAGTAGTATTAGG+AGG | - | chr1_1:62138612-62138631 | Msa0034200:intron | 40.0% |
| TGTTATGATCCATGTGCTTC+AGG | - | chr1_1:62138869-62138888 | Msa0034200:intron | 40.0% | |
| AAACCATGTTGCAATCACTG+TGG | - | chr1_1:62138899-62138918 | Msa0034200:intron | 40.0% | |
| AACCATGTTGCAATCACTGT+GGG | - | chr1_1:62138900-62138919 | Msa0034200:intron | 40.0% | |
| ACATACTTGCAGGAGATTAC+TGG | + | chr1_1:62138973-62138992 | None:intergenic | 40.0% | |
| ! | CAAACAAGGAACTTCTAGCT+AGG | - | chr1_1:62139043-62139062 | Msa0034200:intron | 40.0% |
| CATCAACCTAGAATCAGGTA+AGG | + | chr1_1:62139093-62139112 | None:intergenic | 40.0% | |
| ! | GCACAAACTCTTTGCTATGT+TGG | - | chr1_1:62139228-62139247 | Msa0034200:intron | 40.0% |
| TGGCAAAGTAGAAAATGGGA+AGG | - | chr1_1:62139248-62139267 | Msa0034200:intron | 40.0% | |
| AAGACAGGAGGAAACTTACT+GGG | + | chr1_1:62139731-62139750 | None:intergenic | 40.0% | |
| TGGATTTAGATGGAGGAGGA+TGG | + | chr1_1:62134084-62134103 | None:intergenic | 45.0% | |
| GGTTTGGATTTAGATGGAGG+AGG | + | chr1_1:62134088-62134107 | None:intergenic | 45.0% | |
| CGCCATTGAATGAAAGGGTT+TGG | + | chr1_1:62134104-62134123 | None:intergenic | 45.0% | |
| ! | GTAGAGCGCCATTGAATGAA+AGG | + | chr1_1:62134110-62134129 | None:intergenic | 45.0% |
| !! | GAGTGTTGGTGAGGTTGATT+TGG | + | chr1_1:62134155-62134174 | None:intergenic | 45.0% |
| !! | AAAGGTGAAGAGTGTTGGTG+AGG | + | chr1_1:62134164-62134183 | None:intergenic | 45.0% |
| ! | TAGCGAAAGGTGAAGAGTGT+TGG | + | chr1_1:62134169-62134188 | None:intergenic | 45.0% |
| !! | GGTTGATGAGAAGTAGCGAA+AGG | + | chr1_1:62134182-62134201 | None:intergenic | 45.0% |
| AGAGAAGAACGCGACACATT+CGG | - | chr1_1:62134211-62134230 | Msa0034200:intron | 45.0% | |
| TTGTCGGAGGGAACTTGAAT+GGG | + | chr1_1:62134238-62134257 | None:intergenic | 45.0% | |
| TTTGTCGGAGGGAACTTGAA+TGG | + | chr1_1:62134239-62134258 | None:intergenic | 45.0% | |
| AAGTTCCCTCCGACAAACTA+TGG | - | chr1_1:62134242-62134261 | Msa0034200:intron | 45.0% | |
| AGTTCCCTCCGACAAACTAT+GGG | - | chr1_1:62134243-62134262 | Msa0034200:intron | 45.0% | |
| ! | TTGTGCTCCCCATAGTTTGT+CGG | + | chr1_1:62134254-62134273 | None:intergenic | 45.0% |
| TTGGTTCAGGCATACGTTCA+CGG | + | chr1_1:62134315-62134334 | None:intergenic | 45.0% | |
| ATGCCGAAAGAGCGAATGAT+TGG | + | chr1_1:62134334-62134353 | None:intergenic | 45.0% | |
| CCAGTTTGCCAAACAACAAG+AGG | + | chr1_1:62134542-62134561 | None:intergenic | 45.0% | |
| !! | CCTCTTGTTGTTTGGCAAAC+TGG | - | chr1_1:62134539-62134558 | Msa0034200:intron | 45.0% |
| GTTGTTTGGCAAACTGGAAG+TGG | - | chr1_1:62134545-62134564 | Msa0034200:intron | 45.0% | |
| ACTAAGTCACTGTGCTCAAG+TGG | - | chr1_1:62134730-62134749 | Msa0034200:intron | 45.0% | |
| GCTAGGCTATACTTACCTTC+CGG | - | chr1_1:62134824-62134843 | Msa0034200:intron | 45.0% | |
| TTACCTTCCGGATTGAACTC+TGG | - | chr1_1:62134836-62134855 | Msa0034200:intron | 45.0% | |
| AATCCAGAGTTCAATCCGGA+AGG | + | chr1_1:62134842-62134861 | None:intergenic | 45.0% | |
| GGATTGAACTCTGGATTACC+AGG | - | chr1_1:62134845-62134864 | Msa0034200:intron | 45.0% | |
| TTACTAAGGGAAAGAGTCCC+TGG | + | chr1_1:62134866-62134885 | None:intergenic | 45.0% | |
| GGACTCTTTCCCTTAGTAAC+TGG | - | chr1_1:62134867-62134886 | Msa0034200:intron | 45.0% | |
| CTCTTTCCCTTAGTAACTGG+AGG | - | chr1_1:62134870-62134889 | Msa0034200:intron | 45.0% | |
| CACTGCAGTGATCAAATGGA+TGG | + | chr1_1:62135544-62135563 | None:intergenic | 45.0% | |
| CATCCATTTGATCACTGCAG+TGG | - | chr1_1:62135542-62135561 | Msa0034200:intron | 45.0% | |
| CATGTAACGTCTTCAAGCTG+GGG | + | chr1_1:62135892-62135911 | None:intergenic | 45.0% | |
| GCATGTAACGTCTTCAAGCT+GGG | + | chr1_1:62135893-62135912 | None:intergenic | 45.0% | |
| AGCATGTAACGTCTTCAAGC+TGG | + | chr1_1:62135894-62135913 | None:intergenic | 45.0% | |
| ACATGCTACACTTGACGCAA+AGG | - | chr1_1:62135907-62135926 | Msa0034200:intron | 45.0% | |
| ! | CAATTTTGTGTGGTTGCCTG+AGG | - | chr1_1:62136053-62136072 | Msa0034200:intron | 45.0% |
| ! | GTCAGAAGTCTTATACCCTC+AGG | + | chr1_1:62136072-62136091 | None:intergenic | 45.0% |
| TATAAGACTTCTGACACGGC+AGG | - | chr1_1:62136077-62136096 | Msa0034200:intron | 45.0% | |
| ATAAGACTTCTGACACGGCA+GGG | - | chr1_1:62136078-62136097 | Msa0034200:intron | 45.0% | |
| ATGGCACGAGTTAAGAGTAG+CGG | + | chr1_1:62136311-62136330 | None:intergenic | 45.0% | |
| ACCTGTTCTTCTTATGGCTC+TGG | - | chr1_1:62136462-62136481 | Msa0034200:intron | 45.0% | |
| ACCAGAGCCATAAGAAGAAC+AGG | + | chr1_1:62136466-62136485 | None:intergenic | 45.0% | |
| GATGCTACACCTTTGACTCT+CGG | - | chr1_1:62136897-62136916 | Msa0034200:intron | 45.0% | |
| ATCATGACAGTTTGTGGGAG+GGG | - | chr1_1:62137021-62137040 | Msa0034200:CDS | 45.0% | |
| CTGATACATACGCGGCAAAA+TGG | + | chr1_1:62137104-62137123 | None:intergenic | 45.0% | |
| ! | CATTTTGCCGCGTATGTATC+AGG | - | chr1_1:62137102-62137121 | Msa0034200:intron | 45.0% |
| ATTCAATCCAGTCCCTACAG+CGG | + | chr1_1:62137229-62137248 | None:intergenic | 45.0% | |
| ! | GCTAGTATTTTCCGCGAACT+TGG | - | chr1_1:62137808-62137827 | Msa0034200:intron | 45.0% |
| AATCATGGGCAGCCTGAAAA+TGG | + | chr1_1:62137885-62137904 | None:intergenic | 45.0% | |
| AGAAGCCGCAATTGTGTTGA+GGG | + | chr1_1:62137929-62137948 | None:intergenic | 45.0% | |
| AAGAAGCCGCAATTGTGTTG+AGG | + | chr1_1:62137930-62137949 | None:intergenic | 45.0% | |
| ACAGGCATAATACTGCTTCC+CGG | + | chr1_1:62138142-62138161 | None:intergenic | 45.0% | |
| CCTTCCCCTGAAACAGAATA+AGG | + | chr1_1:62138275-62138294 | None:intergenic | 45.0% | |
| CCTTATTCTGTTTCAGGGGA+AGG | - | chr1_1:62138272-62138291 | Msa0034200:CDS | 45.0% | |
| CATAGTCAAAGCCTCACACT+GGG | + | chr1_1:62138307-62138326 | None:intergenic | 45.0% | |
| TTTGACTATGGTCTGTGCAC+AGG | - | chr1_1:62138317-62138336 | Msa0034200:CDS | 45.0% | |
| GCTAATAGGGTCCATGATAG+GGG | - | chr1_1:62138450-62138469 | Msa0034200:intron | 45.0% | |
| CTAATAGGGTCCATGATAGG+GGG | - | chr1_1:62138451-62138470 | Msa0034200:intron | 45.0% | |
| AACAGAACAAGATGGCAAGC+TGG | - | chr1_1:62138534-62138553 | Msa0034200:intron | 45.0% | |
| GGGAGCTAGTTATGTTAGTG+AGG | - | chr1_1:62138562-62138581 | Msa0034200:intron | 45.0% | |
| !! | AAAGTGCTGAGCTGAAGAGA+AGG | - | chr1_1:62138635-62138654 | Msa0034200:intron | 45.0% |
| AGCATAAAGCTGGGTATGCA+AGG | - | chr1_1:62138670-62138689 | Msa0034200:intron | 45.0% | |
| GCATAAAGCTGGGTATGCAA+GGG | - | chr1_1:62138671-62138690 | Msa0034200:intron | 45.0% | |
| CATAAAGCTGGGTATGCAAG+GGG | - | chr1_1:62138672-62138691 | Msa0034200:intron | 45.0% | |
| ATCCATGTGCTTCAGGTCAT+GGG | - | chr1_1:62138876-62138895 | Msa0034200:intron | 45.0% | |
| ATCACTGTGGGAGGATCAAA+TGG | - | chr1_1:62138912-62138931 | Msa0034200:intron | 45.0% | |
| AGGAGATTACTGGCAATCAC+TGG | + | chr1_1:62138963-62138982 | None:intergenic | 45.0% | |
| TTGTAGTCAGTGAGACTGCT+TGG | - | chr1_1:62139495-62139514 | Msa0034200:intron | 45.0% | |
| GAGGAAACTTACTGGGTTCA+AGG | + | chr1_1:62139724-62139743 | None:intergenic | 45.0% | |
| GAAGACAGGAGGAAACTTAC+TGG | + | chr1_1:62139732-62139751 | None:intergenic | 45.0% | |
| AGTGAGCTACAGAAGAAGAC+AGG | + | chr1_1:62139746-62139765 | None:intergenic | 45.0% | |
| AAGTGTAGACCCCTCTTTGT+GGG | + | chr1_1:62139854-62139873 | None:intergenic | 45.0% | |
| TAAGTGTAGACCCCTCTTTG+TGG | + | chr1_1:62139855-62139874 | None:intergenic | 45.0% | |
| CAAAGAGGGGTCTACACTTA+AGG | - | chr1_1:62139855-62139874 | Msa0034200:five_prime_UTR | 45.0% | |
| !!! | TATTTATCAAAATTTTATTT+TGG | - | chr1_1:62134628-62134647 | Msa0034200:intron | 5.0% |
| ! | GCGTTCTTCTCTGAAGGTAG+TGG | + | chr1_1:62134203-62134222 | None:intergenic | 50.0% |
| TGTGTCGCGTTCTTCTCTGA+AGG | + | chr1_1:62134209-62134228 | None:intergenic | 50.0% | |
| GTTCCCTCCGACAAACTATG+GGG | - | chr1_1:62134244-62134263 | Msa0034200:intron | 50.0% | |
| TGGTTCAGGCATACGTTCAC+GGG | + | chr1_1:62134314-62134333 | None:intergenic | 50.0% | |
| AGGCCACTGCAGTGATCAAA+TGG | + | chr1_1:62135548-62135567 | None:intergenic | 50.0% | |
| GAGATTCTTGGCCATAAGCG+CGG | - | chr1_1:62135628-62135647 | Msa0034200:CDS | 50.0% | |
| CAAACTTCTCACCGCGCTTA+TGG | + | chr1_1:62135642-62135661 | None:intergenic | 50.0% | |
| CACGAGTTAAGAGTAGCGGT+GGG | + | chr1_1:62136307-62136326 | None:intergenic | 50.0% | |
| ACTCTTAACTCGTGCCATCC+TGG | - | chr1_1:62136313-62136332 | Msa0034200:intron | 50.0% | |
| TAACTCGTGCCATCCTGGTA+AGG | - | chr1_1:62136318-62136337 | Msa0034200:intron | 50.0% | |
| !!! | TCTGGTCTTGTGGTTTTGGC+TGG | - | chr1_1:62136566-62136585 | Msa0034200:intron | 50.0% |
| TACACCTTTGACTCTCGGAC+AGG | - | chr1_1:62136902-62136921 | Msa0034200:intron | 50.0% | |
| AACTCCTGTCCGAGAGTCAA+AGG | + | chr1_1:62136909-62136928 | None:intergenic | 50.0% | |
| ACTCTCGGACAGGAGTTTAG+TGG | - | chr1_1:62136912-62136931 | Msa0034200:intron | 50.0% | |
| !! | GGTGTCACTAGCAGTAGCTA+CGG | - | chr1_1:62137676-62137695 | Msa0034200:intron | 50.0% |
| GATGCAAGACACCAAGTTCG+CGG | + | chr1_1:62137822-62137841 | None:intergenic | 50.0% | |
| TGGAGCCCTCAACACAATTG+CGG | - | chr1_1:62137921-62137940 | Msa0034200:intron | 50.0% | |
| TATTGTAGTGGTCCCCGTTG+CGG | - | chr1_1:62138085-62138104 | Msa0034200:CDS | 50.0% | |
| TGAGTTCACCAAGACCGCAA+CGG | + | chr1_1:62138102-62138121 | None:intergenic | 50.0% | |
| TCAAAGCCTCACACTGGGTA+GGG | + | chr1_1:62138302-62138321 | None:intergenic | 50.0% | |
| CCATAGTCAAAGCCTCACAC+TGG | + | chr1_1:62138308-62138327 | None:intergenic | 50.0% | |
| ! | CCAGTGTGAGGCTTTGACTA+TGG | - | chr1_1:62138305-62138324 | Msa0034200:CDS | 50.0% |
| AAGATGGCAAGCTGGTGTGA+GGG | - | chr1_1:62138542-62138561 | Msa0034200:intron | 50.0% | |
| GGGGAATAGTCTCTCTCTCT+TGG | - | chr1_1:62138691-62138710 | Msa0034200:intron | 50.0% | |
| !! | TCTCTTGGAGCTTTGAGCTC+TGG | - | chr1_1:62138706-62138725 | Msa0034200:intron | 50.0% |
| !! | CTCTTGGAGCTTTGAGCTCT+GGG | - | chr1_1:62138707-62138726 | Msa0034200:intron | 50.0% |
| GATCCATGTGCTTCAGGTCA+TGG | - | chr1_1:62138875-62138894 | Msa0034200:intron | 50.0% | |
| TTCCCATGACCTGAAGCACA+TGG | + | chr1_1:62138881-62138900 | None:intergenic | 50.0% | |
| CTCCCACAGTGATTGCAACA+TGG | + | chr1_1:62138905-62138924 | None:intergenic | 50.0% | |
| CATGTTGCAATCACTGTGGG+AGG | - | chr1_1:62138903-62138922 | Msa0034200:intron | 50.0% | |
| ATCCAGGCCGTGTGAATGAA+TGG | - | chr1_1:62139382-62139401 | Msa0034200:intron | 50.0% | |
| TCCAGGCCGTGTGAATGAAT+GGG | - | chr1_1:62139383-62139402 | Msa0034200:intron | 50.0% | |
| CAGGTGCCCATTCATTCACA+CGG | + | chr1_1:62139392-62139411 | None:intergenic | 50.0% | |
| GTGAATGAATGGGCACCTGT+TGG | - | chr1_1:62139393-62139412 | Msa0034200:intron | 50.0% | |
| ACCAGCATGAGTGACTGGAA+GGG | + | chr1_1:62139696-62139715 | None:intergenic | 50.0% | |
| ATGTGACCAGCATGAGTGAC+TGG | + | chr1_1:62139701-62139720 | None:intergenic | 50.0% | |
| GAGCTACAGAAGAAGACAGG+AGG | + | chr1_1:62139743-62139762 | None:intergenic | 50.0% | |
| ! | GCTCCCCATAGTTTGTCGGA+GGG | + | chr1_1:62134250-62134269 | None:intergenic | 55.0% |
| ! | TGCTCCCCATAGTTTGTCGG+AGG | + | chr1_1:62134251-62134270 | None:intergenic | 55.0% |
| GGTTCAGGCATACGTTCACG+GGG | + | chr1_1:62134313-62134332 | None:intergenic | 55.0% | |
| GCTGCGCAAGAAGTTGCTGA+TGG | - | chr1_1:62134497-62134516 | Msa0034200:intron | 55.0% | |
| TGTGGCTGTGCCGAACTTGA+AGG | - | chr1_1:62135331-62135350 | Msa0034200:intron | 55.0% | |
| GCACGAGTTAAGAGTAGCGG+TGG | + | chr1_1:62136308-62136327 | None:intergenic | 55.0% | |
| AAGTTCCCGCCTTACCAGGA+TGG | + | chr1_1:62136330-62136349 | None:intergenic | 55.0% | |
| ACTCAAGTTCCCGCCTTACC+AGG | + | chr1_1:62136334-62136353 | None:intergenic | 55.0% | |
| TGGTAAGGCGGGAACTTGAG+TGG | - | chr1_1:62136333-62136352 | Msa0034200:intron | 55.0% | |
| TTACTTGAGCAGCTCGCCCA+GGG | - | chr1_1:62137198-62137217 | Msa0034200:intron | 55.0% | |
| AGTTCACCAAGACCGCAACG+GGG | + | chr1_1:62138100-62138119 | None:intergenic | 55.0% | |
| GAGTTCACCAAGACCGCAAC+GGG | + | chr1_1:62138101-62138120 | None:intergenic | 55.0% | |
| !! | CTGCTTCCCGGTTCGTTTTC+AGG | + | chr1_1:62138130-62138149 | None:intergenic | 55.0% |
| GGTTAACCCTACCCAGTGTG+AGG | - | chr1_1:62138293-62138312 | Msa0034200:CDS | 55.0% | |
| GTCAAAGCCTCACACTGGGT+AGG | + | chr1_1:62138303-62138322 | None:intergenic | 55.0% | |
| ATAGGGTCCATGATAGGGGG+TGG | - | chr1_1:62138454-62138473 | Msa0034200:intron | 55.0% | |
| TAGGGTCCATGATAGGGGGT+GGG | - | chr1_1:62138455-62138474 | Msa0034200:intron | 55.0% | |
| CAAGATGGCAAGCTGGTGTG+AGG | - | chr1_1:62138541-62138560 | Msa0034200:intron | 55.0% | |
| ACCCTTCCAGTCACTCATGC+TGG | - | chr1_1:62139692-62139711 | Msa0034200:CDS | 55.0% | |
| GACCAGCATGAGTGACTGGA+AGG | + | chr1_1:62139697-62139716 | None:intergenic | 55.0% | |
| TGCCAAGACAGCCCACAAAG+AGG | - | chr1_1:62139840-62139859 | Msa0034200:five_prime_UTR | 55.0% | |
| GCCAAGACAGCCCACAAAGA+GGG | - | chr1_1:62139841-62139860 | Msa0034200:five_prime_UTR | 55.0% | |
| CCAAGACAGCCCACAAAGAG+GGG | - | chr1_1:62139842-62139861 | Msa0034200:five_prime_UTR | 55.0% | |
| CAGCGGCAATGTGCATCACC+TGG | + | chr1_1:62135844-62135863 | None:intergenic | 60.0% | |
| CAGGTGATGCACATTGCCGC+TGG | - | chr1_1:62135842-62135861 | Msa0034200:intron | 60.0% | |
| AGACTTCTGACACGGCAGGG+AGG | - | chr1_1:62136081-62136100 | Msa0034200:intron | 60.0% | |
| GACTTCTGACACGGCAGGGA+GGG | - | chr1_1:62136082-62136101 | Msa0034200:intron | 60.0% | |
| ACTTCTGACACGGCAGGGAG+GGG | - | chr1_1:62136083-62136102 | Msa0034200:intron | 60.0% | |
| CTCGTGCCATCCTGGTAAGG+CGG | - | chr1_1:62136321-62136340 | Msa0034200:intron | 60.0% | |
| TCGTGCCATCCTGGTAAGGC+GGG | - | chr1_1:62136322-62136341 | Msa0034200:intron | 60.0% | |
| GTTACTTGAGCAGCTCGCCC+AGG | - | chr1_1:62137197-62137216 | Msa0034200:intron | 60.0% | |
| AGGGTCCATGATAGGGGGTG+GGG | - | chr1_1:62138456-62138475 | Msa0034200:intron | 60.0% | |
| TCCATGATAGGGGGTGGGGT+GGG | - | chr1_1:62138460-62138479 | Msa0034200:intron | 60.0% | |
| GCCCATTCATTCACACGGCC+TGG | + | chr1_1:62139387-62139406 | None:intergenic | 60.0% | |
| ! | CCCCTCTTTGTGGGCTGTCT+TGG | + | chr1_1:62139845-62139864 | None:intergenic | 60.0% |
| CCCTACAGCGGTACCACCCT+GGG | + | chr1_1:62137217-62137236 | None:intergenic | 65.0% | |
| CCCAGGGTGGTACCGCTGTA+GGG | - | chr1_1:62137214-62137233 | Msa0034200:intron | 65.0% | |
| TCCCTACAGCGGTACCACCC+TGG | + | chr1_1:62137218-62137237 | None:intergenic | 65.0% | |
| GGTGGTACCGCTGTAGGGAC+TGG | - | chr1_1:62137219-62137238 | Msa0034200:intron | 65.0% | |
| AGTGGTCCCCGTTGCGGTCT+TGG | - | chr1_1:62138091-62138110 | Msa0034200:intron | 65.0% | |
| GTCCATGATAGGGGGTGGGG+TGG | - | chr1_1:62138459-62138478 | Msa0034200:intron | 65.0% | |
| ACCCACCCCACCCCCTATCA+TGG | + | chr1_1:62138464-62138483 | None:intergenic | 65.0% | |
| ATGATAGGGGGTGGGGTGGG+TGG | - | chr1_1:62138463-62138482 | Msa0034200:intron | 65.0% | |
| TGATAGGGGGTGGGGTGGGT+GGG | - | chr1_1:62138464-62138483 | Msa0034200:intron | 65.0% | |
| GCGGCGTCGCGTACCCTGAT+TGG | - | chr1_1:62134029-62134048 | Msa0034200:CDS | 70.0% | |
| TCTGACACGGCAGGGAGGGG+AGG | - | chr1_1:62136086-62136105 | Msa0034200:intron | 70.0% | |
| CTGACACGGCAGGGAGGGGA+GGG | - | chr1_1:62136087-62136106 | Msa0034200:intron | 70.0% | |
| TGACACGGCAGGGAGGGGAG+GGG | - | chr1_1:62136088-62136107 | Msa0034200:intron | 70.0% | |
| CTTGAGCAGCTCGCCCAGGG+TGG | - | chr1_1:62137201-62137220 | Msa0034200:intron | 70.0% | |
| GCCCAGGGTGGTACCGCTGT+AGG | - | chr1_1:62137213-62137232 | Msa0034200:intron | 70.0% | |
| GATAGGGGGTGGGGTGGGTG+GGG | - | chr1_1:62138465-62138484 | Msa0034200:intron | 70.0% | |
| ATAGGGGGTGGGGTGGGTGG+GGG | - | chr1_1:62138466-62138485 | Msa0034200:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 62134019 | 62139931 | 62134019 | ID=Msa0034200;Name=Msa0034200 |
| chr1_1 | mRNA | 62134019 | 62139931 | 62134019 | ID=Msa0034200-mRNA-1;Parent=Msa0034200;Name=Msa0034200-mRNA-1;_AED=0.12;_eAED=0.12;_QI=99|0.76|0.85|1|0.69|0.85|14|7|448 |
| chr1_1 | exon | 62134019 | 62134139 | 62134019 | ID=Msa0034200-mRNA-1:exon:19563;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62134351 | 62134449 | 62134351 | ID=Msa0034200-mRNA-1:exon:19562;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62134964 | 62135059 | 62134964 | ID=Msa0034200-mRNA-1:exon:19561;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62135612 | 62135662 | 62135612 | ID=Msa0034200-mRNA-1:exon:19560;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62135791 | 62135857 | 62135791 | ID=Msa0034200-mRNA-1:exon:19559;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62135976 | 62136058 | 62135976 | ID=Msa0034200-mRNA-1:exon:19558;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62136205 | 62136286 | 62136205 | ID=Msa0034200-mRNA-1:exon:19557;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62136691 | 62136740 | 62136691 | ID=Msa0034200-mRNA-1:exon:19556;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62136827 | 62136877 | 62136827 | ID=Msa0034200-mRNA-1:exon:19555;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62137003 | 62137101 | 62137003 | ID=Msa0034200-mRNA-1:exon:19554;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62138022 | 62138105 | 62138022 | ID=Msa0034200-mRNA-1:exon:19553;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62138233 | 62138343 | 62138233 | ID=Msa0034200-mRNA-1:exon:19552;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62139403 | 62139504 | 62139403 | ID=Msa0034200-mRNA-1:exon:19551;Parent=Msa0034200-mRNA-1 |
| chr1_1 | exon | 62139575 | 62139931 | 62139575 | ID=Msa0034200-mRNA-1:exon:19550;Parent=Msa0034200-mRNA-1 |
| chr1_1 | five_prime_UTR | 62139833 | 62139931 | 62139833 | ID=Msa0034200-mRNA-1:five_prime_utr;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62139575 | 62139832 | 62139575 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62139403 | 62139504 | 62139403 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62138233 | 62138343 | 62138233 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62138022 | 62138105 | 62138022 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62137003 | 62137101 | 62137003 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62136827 | 62136877 | 62136827 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62136691 | 62136740 | 62136691 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62136205 | 62136286 | 62136205 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62135976 | 62136058 | 62135976 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62135791 | 62135857 | 62135791 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62135612 | 62135662 | 62135612 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62134964 | 62135059 | 62134964 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62134351 | 62134449 | 62134351 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | CDS | 62134026 | 62134139 | 62134026 | ID=Msa0034200-mRNA-1:cds;Parent=Msa0034200-mRNA-1 |
| chr1_1 | three_prime_UTR | 62134019 | 62134025 | 62134019 | ID=Msa0034200-mRNA-1:three_prime_utr;Parent=Msa0034200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
