Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683560 | KEH30070.1 | 97.965 | 344 | 4 | 1 | 1 | 344 | 1 | 341 | 0.0 | 698 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683560 | sp|Q9LZG0|ADK2_ARATH | 82.405 | 341 | 57 | 1 | 4 | 344 | 8 | 345 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683560 | A0A072UW36 | 97.965 | 344 | 4 | 1 | 1 | 344 | 1 | 341 | 0.0 | 698 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034200 | Msa0683560 | 0.820671 | 6.064226e-53 | -8.615850e-47 |
| Msa0683560 | Msa0777460 | 0.818360 | 2.041688e-52 | -8.615850e-47 |
| Msa0683560 | Msa0930360 | 0.803084 | 4.126981e-49 | -8.615850e-47 |
| Msa0683560 | Msa1026850 | 0.831344 | 1.760967e-55 | -8.615850e-47 |
| Msa0683560 | Msa1052810 | 0.830412 | 2.980688e-55 | -8.615850e-47 |
| Msa0683560 | Msa1111820 | 0.828536 | 8.512059e-55 | -8.615850e-47 |
| Msa0683560 | Msa1119970 | 0.808291 | 3.329722e-50 | -8.615850e-47 |
| Msa0683560 | Msa1185870 | 0.841034 | 6.069153e-58 | -8.615850e-47 |
| Msa0683560 | Msa1284800 | 0.816723 | 4.774973e-52 | -8.615850e-47 |
| Msa0128320 | Msa0683560 | 0.826380 | 2.800348e-54 | -8.615850e-47 |
| Msa0602440 | Msa0683560 | 0.804753 | 1.857092e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683560 | MtrunA17_Chr4g0030041 | 96.221 | 344 | 11 | 1 | 1 | 344 | 1 | 342 | 0.0 | 683 |
| Msa0683560 | MtrunA17_Chr1g0181071 | 95.349 | 344 | 13 | 1 | 1 | 344 | 1 | 341 | 0.0 | 681 |
| Msa0683560 | MtrunA17_Chr3g0141731 | 25.915 | 328 | 208 | 15 | 14 | 329 | 29 | 333 | 4.43e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683560 | AT5G03300.1 | 82.405 | 341 | 57 | 1 | 4 | 344 | 8 | 345 | 0.0 | 600 |
| Msa0683560 | AT3G09820.1 | 82.991 | 341 | 55 | 1 | 3 | 343 | 6 | 343 | 0.0 | 596 |
| Msa0683560 | AT3G09820.2 | 84.175 | 297 | 44 | 1 | 47 | 343 | 8 | 301 | 0.0 | 525 |
| Msa0683560 | AT5G03300.3 | 82.993 | 294 | 47 | 1 | 50 | 343 | 1 | 291 | 0.0 | 521 |
| Msa0683560 | AT5G03300.2 | 82.993 | 294 | 47 | 1 | 50 | 343 | 1 | 291 | 0.0 | 521 |
| Msa0683560 | AT1G19600.1 | 25.672 | 335 | 217 | 14 | 14 | 339 | 23 | 334 | 4.37e-14 | 72.8 |
Find 109 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGTATATGGACTATGTATT+TGG | 0.205120 | 4_4:-46175186 | Msa0683560:CDS |
| ACCAGCTTGTTTAGAGTTCT+TGG | 0.208302 | 4_4:+46175985 | None:intergenic |
| ATTTGAAGAAACCCGAAAAT+TGG | 0.225304 | 4_4:-46175636 | Msa0683560:CDS |
| AGTTGCACTCTAACTGGTTT+TGG | 0.231902 | 4_4:-46174540 | Msa0683560:three_prime_UTR |
| TTCCTGATGCCTTTGGCAAC+TGG | 0.236821 | 4_4:+46174992 | None:intergenic |
| CATTCTGGGATTCAGGTATA+TGG | 0.238438 | 4_4:-46175199 | Msa0683560:intron |
| GCCAAATATTTCTATATTGC+TGG | 0.248568 | 4_4:-46175504 | Msa0683560:CDS |
| GTATCAACTAATTTCTCTTT+AGG | 0.253965 | 4_4:+46174877 | None:intergenic |
| TCTTTAGGTAATAGAATTAC+AGG | 0.256176 | 4_4:+46174892 | None:intergenic |
| CTTGAAGAACTCACATATAA+AGG | 0.274936 | 4_4:+46175312 | None:intergenic |
| AATGTACTCCACGTTATATT+TGG | 0.281042 | 4_4:+46176313 | None:intergenic |
| TCCAGCAATATAGAAATATT+TGG | 0.289493 | 4_4:+46175503 | None:intergenic |
| TATTGAAAATCAGGCTTCTC+TGG | 0.291194 | 4_4:+46174633 | None:intergenic |
| ATTAATAGTTGCACTCTAAC+TGG | 0.308482 | 4_4:-46174546 | Msa0683560:three_prime_UTR |
| GCTTTGGAAGGTGTTCTTCT+TGG | 0.324177 | 4_4:-46177485 | Msa0683560:CDS |
| AGAATCACTTATTGAAAATC+AGG | 0.327042 | 4_4:+46174624 | None:intergenic |
| TAAGAAATGATGCCTATATT+AGG | 0.332428 | 4_4:+46174432 | None:intergenic |
| AGCAACTAATTGAATGGATT+CGG | 0.333100 | 4_4:+46175461 | None:intergenic |
| GGAAGGTGTTCTTCTTGGTA+TGG | 0.348012 | 4_4:-46177480 | Msa0683560:CDS |
| GCAACTAATTGAATGGATTC+GGG | 0.354886 | 4_4:+46175462 | None:intergenic |
| TAGTGGTTGCTTCAAGTTCC+CGG | 0.356075 | 4_4:-46176061 | Msa0683560:CDS |
| TGGAGGATTTCTTTCACAAT+TGG | 0.357365 | 4_4:-46174739 | Msa0683560:CDS |
| TGTATTTGAAGTCCTAATAT+AGG | 0.362122 | 4_4:-46174444 | Msa0683560:three_prime_UTR |
| TTCACCCCTTCTCCCTAGTC+GGG | 0.363565 | 4_4:+46174502 | None:intergenic |
| GCTCTCACACATTCTTCAAT+AGG | 0.364927 | 4_4:+46174705 | None:intergenic |
| TCCTGATGCCTTTGGCAACT+GGG | 0.376131 | 4_4:+46174993 | None:intergenic |
| CGAGAATAGCATTGTTCAAC+TGG | 0.377377 | 4_4:+46177238 | None:intergenic |
| TCTCGCATCAACAATGGCTT+TGG | 0.379448 | 4_4:-46177501 | Msa0683560:exon |
| TTGTGTGTTCCTGATGCCTT+TGG | 0.383545 | 4_4:+46174985 | None:intergenic |
| TGCATTGGGAAGGACAAGTT+TGG | 0.384984 | 4_4:-46176019 | Msa0683560:CDS |
| AAACCCGAAAATTGGGCATT+AGG | 0.397247 | 4_4:-46175628 | Msa0683560:intron |
| CTTTATATGTGAGTTCTTCA+AGG | 0.401114 | 4_4:-46175311 | Msa0683560:CDS |
| TTTGAAGAAACCCGAAAATT+GGG | 0.414245 | 4_4:-46175635 | Msa0683560:CDS |
| AGCTATCTCCTCGACATTAT+CGG | 0.414959 | 4_4:+46175026 | None:intergenic |
| ACTTGTGCTGTTTGTGTCGT+TGG | 0.426149 | 4_4:-46175828 | Msa0683560:CDS |
| CTTCAAAATAGTAATAGAAT+CGG | 0.427891 | 4_4:+46174600 | None:intergenic |
| ACCGATGTAACTAGTGGCTC+CGG | 0.432188 | 4_4:+46176042 | None:intergenic |
| CTAGTTACATCGGTTGCATT+GGG | 0.448977 | 4_4:-46176033 | Msa0683560:CDS |
| TTTGTAGGAGATGCCTTTGT+TGG | 0.450937 | 4_4:-46174759 | Msa0683560:intron |
| ACTAGTTACATCGGTTGCAT+TGG | 0.454698 | 4_4:-46176034 | Msa0683560:CDS |
| TTGAAGAACTCACATATAAA+GGG | 0.455056 | 4_4:+46175313 | None:intergenic |
| GTAGGAGATGCCTTTGTTGG+AGG | 0.455368 | 4_4:-46174756 | Msa0683560:intron |
| TCCCAGTTGCCAAAGGCATC+AGG | 0.461050 | 4_4:-46174994 | Msa0683560:CDS |
| CTTCACCCCTTCTCCCTAGT+CGG | 0.463103 | 4_4:+46174501 | None:intergenic |
| ATTCTTCAATAGGTTTCTCC+TGG | 0.464884 | 4_4:+46174715 | None:intergenic |
| GAATTCAATCAGGGTTGCTC+AGG | 0.465156 | 4_4:-46176179 | Msa0683560:CDS |
| GTGCTACTCAGAATTCAATC+AGG | 0.465309 | 4_4:-46176189 | Msa0683560:CDS |
| GAAGGTGTTCTTCTTGGTAT+GGG | 0.471521 | 4_4:-46177479 | Msa0683560:CDS |
| TAGGGCATTACCTGCTCCAT+TGG | 0.477788 | 4_4:+46174855 | None:intergenic |
| ATGTTCAGCAACTAATTGAA+TGG | 0.478120 | 4_4:+46175455 | None:intergenic |
| AAGGGGTGAAGAAGTTGTCG+AGG | 0.479973 | 4_4:-46174489 | Msa0683560:three_prime_UTR |
| GCAATTTGCAGCTGATAAGT+TGG | 0.489440 | 4_4:+46175672 | None:intergenic |
| CTTCTCTGGGTAAGTGCAGC+CGG | 0.491076 | 4_4:+46174647 | None:intergenic |
| GAAATGTTAACTTGTGCCCT+TGG | 0.494229 | 4_4:+46177743 | None:intergenic |
| ATTGAAAATCAGGCTTCTCT+GGG | 0.503018 | 4_4:+46174634 | None:intergenic |
| CCCGTGTGTGTTGCTCAAGA+TGG | 0.504240 | 4_4:-46174931 | Msa0683560:CDS |
| ATTTCTTTCACAATTGGTCC+AGG | 0.505204 | 4_4:-46174733 | Msa0683560:CDS |
| AATGTTATCATTCAAAGGTC+CGG | 0.511083 | 4_4:-46174666 | Msa0683560:CDS |
| TTCAAAATAGTAATAGAATC+GGG | 0.513215 | 4_4:+46174601 | None:intergenic |
| TATAACGTGGAGTACATTGC+TGG | 0.514705 | 4_4:-46176308 | Msa0683560:CDS |
| ATCAGCACCCTGTGTGATAA+CGG | 0.517329 | 4_4:+46174954 | None:intergenic |
| TACGGAAGAGCTTTCTCCTG+TGG | 0.523507 | 4_4:+46175286 | None:intergenic |
| GAGAAATTAGTTGATACCAA+TGG | 0.529177 | 4_4:-46174871 | Msa0683560:CDS |
| AGGCATCAGGAACACACAAA+AGG | 0.529385 | 4_4:-46174981 | Msa0683560:CDS |
| AAAATCCCCGACTAGGGAGA+AGG | 0.532903 | 4_4:-46174508 | Msa0683560:three_prime_UTR |
| TTAGTTGATACCAATGGAGC+AGG | 0.536544 | 4_4:-46174865 | Msa0683560:intron |
| AACTAAGATGACAAACAGAT+AGG | 0.541482 | 4_4:+46174286 | None:intergenic |
| TTTGTGTCGTTGGTGGTGAA+AGG | 0.544058 | 4_4:-46175818 | Msa0683560:intron |
| AAATCCCCGACTAGGGAGAA+GGG | 0.545579 | 4_4:-46174507 | Msa0683560:three_prime_UTR |
| TGTGCTGTTTGTGTCGTTGG+TGG | 0.549931 | 4_4:-46175825 | Msa0683560:CDS |
| CAGCAAATGTTATCATTCAA+AGG | 0.551386 | 4_4:-46174671 | Msa0683560:CDS |
| GACAGCAGAGATGTCGAGAA+GGG | 0.552559 | 4_4:+46177451 | None:intergenic |
| ATTGAAGAATGTGTGAGAGC+TGG | 0.554569 | 4_4:-46174702 | Msa0683560:CDS |
| AACACTTCTCGCATCAACAA+TGG | 0.556176 | 4_4:-46177507 | Msa0683560:exon |
| AGGGGTGAAGAAGTTGTCGA+GGG | 0.558514 | 4_4:-46174488 | Msa0683560:three_prime_UTR |
| CCGTGTGTGTTGCTCAAGAT+GGG | 0.565237 | 4_4:-46174930 | Msa0683560:CDS |
| CCCATCTTGAGCAACACACA+CGG | 0.565436 | 4_4:+46174930 | None:intergenic |
| CGACAGCAGAGATGTCGAGA+AGG | 0.569277 | 4_4:+46177450 | None:intergenic |
| TGAGTTCTTCAAGGATCCAC+AGG | 0.569756 | 4_4:-46175302 | Msa0683560:CDS |
| TTGAAGAATGTGTGAGAGCT+GGG | 0.569874 | 4_4:-46174701 | Msa0683560:CDS |
| CACATATAAAGGGTGCAGAA+AGG | 0.573702 | 4_4:+46175323 | None:intergenic |
| GAAGACGAGAATACACCTAC+AGG | 0.574426 | 4_4:-46175852 | Msa0683560:CDS |
| ACCAAGAACTCTAAACAAGC+TGG | 0.574572 | 4_4:-46175986 | Msa0683560:CDS |
| TTTCTTAACTTATGCACCAA+GGG | 0.575221 | 4_4:-46177759 | None:intergenic |
| TGAAAGAAATCCTCCAACAA+AGG | 0.578951 | 4_4:+46174746 | None:intergenic |
| CCGATGTAACTAGTGGCTCC+GGG | 0.591002 | 4_4:+46176043 | None:intergenic |
| CCCGGAGCCACTAGTTACAT+CGG | 0.598586 | 4_4:-46176043 | Msa0683560:CDS |
| TTACATCGGTTGCATTGGGA+AGG | 0.601422 | 4_4:-46176029 | Msa0683560:CDS |
| CTTTAGGTAATAGAATTACA+GGG | 0.605211 | 4_4:+46174893 | None:intergenic |
| ATTTCTTAACTTATGCACCA+AGG | 0.606396 | 4_4:-46177760 | None:intergenic |
| TCACCCCTTCTCCCTAGTCG+GGG | 0.608207 | 4_4:+46174503 | None:intergenic |
| GCATCAACAATGGCTTTGGA+AGG | 0.614210 | 4_4:-46177497 | Msa0683560:exon |
| CAAGATATCCCAGTTGCCAA+AGG | 0.619346 | 4_4:-46175001 | Msa0683560:CDS |
| AAGGATTACCGTTATCACAC+AGG | 0.620728 | 4_4:-46174962 | Msa0683560:CDS |
| AACTAATTGAATGGATTCGG+GGG | 0.625445 | 4_4:+46175464 | None:intergenic |
| AATCCCCGACTAGGGAGAAG+GGG | 0.626089 | 4_4:-46174506 | Msa0683560:three_prime_UTR |
| CCATCTTGAGCAACACACAC+GGG | 0.628074 | 4_4:+46174931 | None:intergenic |
| TGCTACTCAGAATTCAATCA+GGG | 0.630239 | 4_4:-46176188 | Msa0683560:CDS |
| TGGGAAGGACAAGTTTGGCG+AGG | 0.639413 | 4_4:-46176014 | Msa0683560:CDS |
| ACAGCAGAGATGTCGAGAAG+GGG | 0.640848 | 4_4:+46177452 | None:intergenic |
| TTCGAAAGTTCGTGGCTGGG+AGG | 0.641794 | 4_4:-46175139 | Msa0683560:intron |
| CAACTAATTGAATGGATTCG+GGG | 0.644425 | 4_4:+46175463 | None:intergenic |
| ACATGCAGCTGCAAATAACA+AGG | 0.645685 | 4_4:-46175436 | Msa0683560:intron |
| CAAACAGCACAAGTTCCTGT+AGG | 0.659898 | 4_4:+46175837 | None:intergenic |
| TGACCAGACCGATAATGTCG+AGG | 0.675199 | 4_4:-46175034 | Msa0683560:intron |
| AATGCAACCGATGTAACTAG+TGG | 0.675466 | 4_4:+46176036 | None:intergenic |
| AGGATTACCGTTATCACACA+GGG | 0.685783 | 4_4:-46174961 | Msa0683560:CDS |
| AACGTGGAGTACATTGCTGG+AGG | 0.692110 | 4_4:-46176305 | Msa0683560:intron |
| AATGACTGCCAAATATAACG+TGG | 0.704099 | 4_4:-46176321 | Msa0683560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAACTTTAAACTTTT+GGG | + | chr4_4:46174276-46174295 | None:intergenic | 10.0% |
| !!! | AAAAAAAAACTTTAAACTTT+TGG | + | chr4_4:46174277-46174296 | None:intergenic | 10.0% |
| !!! | AGTTTAAAGTTTTTTTTTTT+AGG | - | chr4_4:46174279-46174298 | Msa0683560:three_prime_UTR | 10.0% |
| !!! | TTTAAAGTTAAAATGTTTTT+TGG | - | chr4_4:46174311-46174330 | Msa0683560:three_prime_UTR | 10.0% |
| !!! | TTAAAGTTAAAATGTTTTTT+GGG | - | chr4_4:46174312-46174331 | Msa0683560:three_prime_UTR | 10.0% |
| !!! | TTGAATTCTAAAAAAAATAT+CGG | + | chr4_4:46175481-46175500 | None:intergenic | 10.0% |
| !!! | TTTTAAATAAATAGTTGAAA+AGG | - | chr4_4:46176468-46176487 | Msa0683560:intron | 10.0% |
| !! | AAATATTTATTTGAATTTGA+CGG | + | chr4_4:46176745-46176764 | None:intergenic | 10.0% |
| !!! | TTTTTTCTTATTGATTTTTA+AGG | - | chr4_4:46176767-46176786 | Msa0683560:intron | 10.0% |
| !!! | ATTTTGATGTAATTATTTCT+TGG | - | chr4_4:46175128-46175147 | Msa0683560:intron | 15.0% |
| !!! | CACTTTTCATTTTTAAATTA+CGG | - | chr4_4:46175213-46175232 | Msa0683560:intron | 15.0% |
| !!! | TACTTTTCCTTTTTAAATTA+CGG | + | chr4_4:46175342-46175361 | None:intergenic | 15.0% |
| !!! | TAATTTTTTTTCTTTTTTGC+AGG | - | chr4_4:46175783-46175802 | Msa0683560:intron | 15.0% |
| !! | AACTTATTTATTTAACAACT+AGG | - | chr4_4:46176108-46176127 | Msa0683560:intron | 15.0% |
| !! | GTAAAAAAAATGAATGATTT+GGG | + | chr4_4:46176235-46176254 | None:intergenic | 15.0% |
| !!! | TGTACAATGTTATGTTATTT+AGG | - | chr4_4:46174876-46174895 | Msa0683560:CDS | 20.0% |
| !!! | TGTGCTACAATATATATTTT+AGG | - | chr4_4:46175043-46175062 | Msa0683560:intron | 20.0% |
| !! | ATATAGTCCGTAATTTAAAA+AGG | - | chr4_4:46175332-46175351 | Msa0683560:CDS | 20.0% |
| !! | AAATAAGTTAATTTCAGAAG+TGG | + | chr4_4:46176097-46176116 | None:intergenic | 20.0% |
| !! | CGTAAAAAAAATGAATGATT+TGG | + | chr4_4:46176236-46176255 | None:intergenic | 20.0% |
| !!! | ATTCATTTTTTTTACGTCTT+TGG | - | chr4_4:46176240-46176259 | Msa0683560:intron | 20.0% |
| !! | ATGTAAAATAAAAACTGCAA+GGG | + | chr4_4:46176906-46176925 | None:intergenic | 20.0% |
| !! | AATGTAAAATAAAAACTGCA+AGG | + | chr4_4:46176907-46176926 | None:intergenic | 20.0% |
| !!! | TTCTTTTGTTTTGTTTTTGT+AGG | - | chr4_4:46177220-46177239 | Msa0683560:CDS | 20.0% |
| !! | TTCAAAATAGTAATAGAATC+GGG | + | chr4_4:46177396-46177415 | None:intergenic | 20.0% |
| !! | CTTCAAAATAGTAATAGAAT+CGG | + | chr4_4:46177397-46177416 | None:intergenic | 20.0% |
| !!! | CAAGTGTTTTTTTTCTTATT+TGG | - | chr4_4:46177603-46177622 | Msa0683560:five_prime_UTR | 20.0% |
| ! | GCAATACTCAGAAATAAAAA+AGG | + | chr4_4:46174613-46174632 | None:intergenic | 25.0% |
| !!! | ATTTTGGTAGTTTTAGAGAT+TGG | - | chr4_4:46174990-46175009 | Msa0683560:CDS | 25.0% |
| !! | TCAGTTTAGCTTATTTACTT+TGG | - | chr4_4:46175073-46175092 | Msa0683560:intron | 25.0% |
| ! | CATAGATACAAAAACACAAA+GGG | + | chr4_4:46175409-46175428 | None:intergenic | 25.0% |
| ! | TCATAGATACAAAAACACAA+AGG | + | chr4_4:46175410-46175429 | None:intergenic | 25.0% |
| ! | TCTAAAAAAAATATCGGTGT+CGG | + | chr4_4:46175475-46175494 | None:intergenic | 25.0% |
| ! | TTTGTATTTGCTTCTTATAG+TGG | - | chr4_4:46175916-46175935 | Msa0683560:intron | 25.0% |
| ! | AAAAAGATCCTGAATTAAGA+AGG | + | chr4_4:46176394-46176413 | None:intergenic | 25.0% |
| ! | TCATCAAAATGACTAACATT+TGG | - | chr4_4:46176434-46176453 | Msa0683560:intron | 25.0% |
| ! | TCCAGCAATATAGAAATATT+TGG | + | chr4_4:46176494-46176513 | None:intergenic | 25.0% |
| ! | TTGAAGAACTCACATATAAA+GGG | + | chr4_4:46176684-46176703 | None:intergenic | 25.0% |
| !!! | ATTTTTAAGGATTTGCATTC+TGG | - | chr4_4:46176780-46176799 | Msa0683560:intron | 25.0% |
| !!! | TTTTTAAGGATTTGCATTCT+GGG | - | chr4_4:46176781-46176800 | Msa0683560:intron | 25.0% |
| !! | TTTTACTTAATAACTCGTCT+TGG | - | chr4_4:46176925-46176944 | Msa0683560:intron | 25.0% |
| ! | CTTTAGGTAATAGAATTACA+GGG | + | chr4_4:46177104-46177123 | None:intergenic | 25.0% |
| ! | TCTTTAGGTAATAGAATTAC+AGG | + | chr4_4:46177105-46177124 | None:intergenic | 25.0% |
| ! | GTATCAACTAATTTCTCTTT+AGG | + | chr4_4:46177120-46177139 | None:intergenic | 25.0% |
| ! | AGAATCACTTATTGAAAATC+AGG | + | chr4_4:46177373-46177392 | None:intergenic | 25.0% |
| !! | TGTATTTGAAGTCCTAATAT+AGG | - | chr4_4:46177550-46177569 | Msa0683560:five_prime_UTR | 25.0% |
| ! | TAAGAAATGATGCCTATATT+AGG | + | chr4_4:46177565-46177584 | None:intergenic | 25.0% |
| ! | TTTTTAAATCTCGTTGTCGT+TGG | - | chr4_4:46174427-46174446 | Msa0683560:three_prime_UTR | 30.0% |
| AAGAAGAAGAAGAAGAAGAA+TGG | - | chr4_4:46174660-46174679 | Msa0683560:CDS | 30.0% | |
| !!! | CGAGTTTAGCTTATTGATTT+TGG | - | chr4_4:46174974-46174993 | Msa0683560:CDS | 30.0% |
| !!! | TCTTGGCCATTTTTCTATTT+AGG | - | chr4_4:46175145-46175164 | Msa0683560:CDS | 30.0% |
| !!! | CTTGGCCATTTTTCTATTTA+GGG | - | chr4_4:46175146-46175165 | Msa0683560:CDS | 30.0% |
| ACACACCCTAAATAGAAAAA+TGG | + | chr4_4:46175154-46175173 | None:intergenic | 30.0% | |
| !! | TTTTCTATTTAGGGTGTGTT+TGG | - | chr4_4:46175155-46175174 | Msa0683560:CDS | 30.0% |
| ! | AAAAACACAAAGGGTTTGTT+TGG | + | chr4_4:46175400-46175419 | None:intergenic | 30.0% |
| ATGTAATTACAAGTGTCAGT+CGG | - | chr4_4:46175500-46175519 | Msa0683560:CDS | 30.0% | |
| GTATGCTAAATTCTTTGTGA+TGG | - | chr4_4:46175576-46175595 | Msa0683560:intron | 30.0% | |
| TATGATTCCACAATCATTTC+AGG | - | chr4_4:46175642-46175661 | Msa0683560:CDS | 30.0% | |
| AATGTACTCCACGTTATATT+TGG | + | chr4_4:46175684-46175703 | None:intergenic | 30.0% | |
| TCTTTAGATTATTGCGTTTC+TGG | - | chr4_4:46175729-46175748 | Msa0683560:intron | 30.0% | |
| CTTTAGATTATTGCGTTTCT+GGG | - | chr4_4:46175730-46175749 | Msa0683560:intron | 30.0% | |
| ! | AATTTCAGAAGTGGATTCTA+CGG | + | chr4_4:46176088-46176107 | None:intergenic | 30.0% |
| ! | ATTTGGGCATTTAAAACACA+AGG | + | chr4_4:46176219-46176238 | None:intergenic | 30.0% |
| TCAAAAAGGTTTCAAAGAAC+TGG | + | chr4_4:46176281-46176300 | None:intergenic | 30.0% | |
| !! | AAACCTTTTTGATTGCATGT+AGG | - | chr4_4:46176289-46176308 | Msa0683560:intron | 30.0% |
| ATTTGAAGAAACCCGAAAAT+TGG | - | chr4_4:46176358-46176377 | Msa0683560:intron | 30.0% | |
| TTTGAAGAAACCCGAAAATT+GGG | - | chr4_4:46176359-46176378 | Msa0683560:intron | 30.0% | |
| ATTAGGTACCTTCTTAATTC+AGG | - | chr4_4:46176383-46176402 | Msa0683560:intron | 30.0% | |
| ! | GCCAAATATTTCTATATTGC+TGG | - | chr4_4:46176490-46176509 | Msa0683560:intron | 30.0% |
| ! | AGCAACTAATTGAATGGATT+CGG | + | chr4_4:46176536-46176555 | None:intergenic | 30.0% |
| ATGTTCAGCAACTAATTGAA+TGG | + | chr4_4:46176542-46176561 | None:intergenic | 30.0% | |
| ATCAAATACTTCTAGCAGAA+AGG | + | chr4_4:46176610-46176629 | None:intergenic | 30.0% | |
| CTTGAAGAACTCACATATAA+AGG | + | chr4_4:46176685-46176704 | None:intergenic | 30.0% | |
| CTTTATATGTGAGTTCTTCA+AGG | - | chr4_4:46176683-46176702 | Msa0683560:intron | 30.0% | |
| ! | AGGTATATGGACTATGTATT+TGG | - | chr4_4:46176808-46176827 | Msa0683560:intron | 30.0% |
| ! | GAGAAATTAGTTGATACCAA+TGG | - | chr4_4:46177123-46177142 | Msa0683560:intron | 30.0% |
| TTCCACTTCAAAAAGCAATA+GGG | + | chr4_4:46177160-46177179 | None:intergenic | 30.0% | |
| ATTCCACTTCAAAAAGCAAT+AGG | + | chr4_4:46177161-46177180 | None:intergenic | 30.0% | |
| !!! | TTGCTTTTTGAAGTGGAATA+TGG | - | chr4_4:46177162-46177181 | Msa0683560:intron | 30.0% |
| CAGCAAATGTTATCATTCAA+AGG | - | chr4_4:46177323-46177342 | Msa0683560:intron | 30.0% | |
| AATGTTATCATTCAAAGGTC+CGG | - | chr4_4:46177328-46177347 | Msa0683560:intron | 30.0% | |
| ATTAATAGTTGCACTCTAAC+TGG | - | chr4_4:46177448-46177467 | Msa0683560:CDS | 30.0% | |
| !!! | TTTTTTAAAAATCCCCGACT+AGG | - | chr4_4:46177479-46177498 | Msa0683560:CDS | 30.0% |
| !! | TTTTTAAAAATCCCCGACTA+GGG | - | chr4_4:46177480-46177499 | Msa0683560:CDS | 30.0% |
| AACTAAGATGACAAACAGAT+AGG | + | chr4_4:46177711-46177730 | None:intergenic | 30.0% | |
| !!! | TGCTTGTTTTGGTTGTTTAC+AGG | - | chr4_4:46174725-46174744 | Msa0683560:CDS | 35.0% |
| !! | TTGAGTCTTGTTTGCTATCA+AGG | - | chr4_4:46175100-46175119 | Msa0683560:intron | 35.0% |
| TTGGATTGAGGGTTTATGAA+GGG | + | chr4_4:46175381-46175400 | None:intergenic | 35.0% | |
| TTTGGATTGAGGGTTTATGA+AGG | + | chr4_4:46175382-46175401 | None:intergenic | 35.0% | |
| ! | AAAGGGTTTGTTTGGATTGA+GGG | + | chr4_4:46175392-46175411 | None:intergenic | 35.0% |
| CATCATACCTGAAATGATTG+TGG | + | chr4_4:46175652-46175671 | None:intergenic | 35.0% | |
| AATGACTGCCAAATATAACG+TGG | - | chr4_4:46175673-46175692 | Msa0683560:CDS | 35.0% | |
| TGCTACTCAGAATTCAATCA+GGG | - | chr4_4:46175806-46175825 | Msa0683560:intron | 35.0% | |
| TGACCTACATGCAATCAAAA+AGG | + | chr4_4:46176295-46176314 | None:intergenic | 35.0% | |
| ! | AACTAATTGAATGGATTCGG+GGG | + | chr4_4:46176533-46176552 | None:intergenic | 35.0% |
| ! | CAACTAATTGAATGGATTCG+GGG | + | chr4_4:46176534-46176553 | None:intergenic | 35.0% |
| ! | GCAACTAATTGAATGGATTC+GGG | + | chr4_4:46176535-46176554 | None:intergenic | 35.0% |
| ATACTTCTAGCAGAAAGGTT+AGG | + | chr4_4:46176605-46176624 | None:intergenic | 35.0% | |
| CATCATGAAAATCTGCACAA+GGG | + | chr4_4:46176649-46176668 | None:intergenic | 35.0% | |
| TCATCATGAAAATCTGCACA+AGG | + | chr4_4:46176650-46176669 | None:intergenic | 35.0% | |
| TTATTTGAATTTGACGGCGA+AGG | + | chr4_4:46176739-46176758 | None:intergenic | 35.0% | |
| TGAAAGAAATCCTCCAACAA+AGG | + | chr4_4:46177251-46177270 | None:intergenic | 35.0% | |
| TGGAGGATTTCTTTCACAAT+TGG | - | chr4_4:46177255-46177274 | Msa0683560:intron | 35.0% | |
| ATTTCTTTCACAATTGGTCC+AGG | - | chr4_4:46177261-46177280 | Msa0683560:intron | 35.0% | |
| ATTCTTCAATAGGTTTCTCC+TGG | + | chr4_4:46177282-46177301 | None:intergenic | 35.0% | |
| ATTGAAAATCAGGCTTCTCT+GGG | + | chr4_4:46177363-46177382 | None:intergenic | 35.0% | |
| TATTGAAAATCAGGCTTCTC+TGG | + | chr4_4:46177364-46177383 | None:intergenic | 35.0% | |
| !! | GAAATGTTAACTTGTGCCCT+TGG | + | chr4_4:46174254-46174273 | None:intergenic | 40.0% |
| AACACTTCTCGCATCAACAA+TGG | - | chr4_4:46174487-46174506 | Msa0683560:three_prime_UTR | 40.0% | |
| !! | GAAGGTGTTCTTCTTGGTAT+GGG | - | chr4_4:46174515-46174534 | Msa0683560:three_prime_UTR | 40.0% |
| ! | TCTCATGCTTCTGCTTGTTT+TGG | - | chr4_4:46174714-46174733 | Msa0683560:CDS | 40.0% |
| CGAGAATAGCATTGTTCAAC+TGG | + | chr4_4:46174759-46174778 | None:intergenic | 40.0% | |
| ! | CTATTTAGGGTGTGTTTGGA+TGG | - | chr4_4:46175159-46175178 | Msa0683560:CDS | 40.0% |
| TTGAGGGTTTATGAAGGGAA+GGG | + | chr4_4:46175376-46175395 | None:intergenic | 40.0% | |
| ATTGAGGGTTTATGAAGGGA+AGG | + | chr4_4:46175377-46175396 | None:intergenic | 40.0% | |
| ! | CAAAGGGTTTGTTTGGATTG+AGG | + | chr4_4:46175393-46175412 | None:intergenic | 40.0% |
| TGAAGCACAAACATAGACAC+CGG | - | chr4_4:46175427-46175446 | Msa0683560:intron | 40.0% | |
| ! | GCACTGACAATTATGACTGA+AGG | + | chr4_4:46175545-46175564 | None:intergenic | 40.0% |
| TATAACGTGGAGTACATTGC+TGG | - | chr4_4:46175686-46175705 | Msa0683560:CDS | 40.0% | |
| ! | AGATTATTGCGTTTCTGGGA+AGG | - | chr4_4:46175734-46175753 | Msa0683560:intron | 40.0% |
| ! | GTGCTACTCAGAATTCAATC+AGG | - | chr4_4:46175805-46175824 | Msa0683560:intron | 40.0% |
| AGCTGAATCTTGAGTACTTG+TGG | - | chr4_4:46175876-46175895 | Msa0683560:intron | 40.0% | |
| AATGCAACCGATGTAACTAG+TGG | + | chr4_4:46175961-46175980 | None:intergenic | 40.0% | |
| ! | ACTAGTTACATCGGTTGCAT+TGG | - | chr4_4:46175960-46175979 | Msa0683560:intron | 40.0% |
| ! | CTAGTTACATCGGTTGCATT+GGG | - | chr4_4:46175961-46175980 | Msa0683560:intron | 40.0% |
| ACCAAGAACTCTAAACAAGC+TGG | - | chr4_4:46176008-46176027 | Msa0683560:CDS | 40.0% | |
| ! | ACCAGCTTGTTTAGAGTTCT+TGG | + | chr4_4:46176012-46176031 | None:intergenic | 40.0% |
| GCAATTTGCAGCTGATAAGT+TGG | + | chr4_4:46176325-46176344 | None:intergenic | 40.0% | |
| AAACCCGAAAATTGGGCATT+AGG | - | chr4_4:46176366-46176385 | Msa0683560:intron | 40.0% | |
| ! | GTACCTAATGCCCAATTTTC+GGG | + | chr4_4:46176372-46176391 | None:intergenic | 40.0% |
| ! | GGTACCTAATGCCCAATTTT+CGG | + | chr4_4:46176373-46176392 | None:intergenic | 40.0% |
| ACATGCAGCTGCAAATAACA+AGG | - | chr4_4:46176558-46176577 | Msa0683560:intron | 40.0% | |
| ! | CACATATAAAGGGTGCAGAA+AGG | + | chr4_4:46176674-46176693 | None:intergenic | 40.0% |
| !! | CATTCTGGGATTCAGGTATA+TGG | - | chr4_4:46176795-46176814 | Msa0683560:intron | 40.0% |
| ! | CGTACATTTTCGAAAGTTCG+TGG | - | chr4_4:46176847-46176866 | Msa0683560:intron | 40.0% |
| ! | ATTTTCGAAAGTTCGTGGCT+GGG | - | chr4_4:46176852-46176871 | Msa0683560:intron | 40.0% |
| AGCTATCTCCTCGACATTAT+CGG | + | chr4_4:46176971-46176990 | None:intergenic | 40.0% | |
| AAGGATTACCGTTATCACAC+AGG | - | chr4_4:46177032-46177051 | Msa0683560:intron | 40.0% | |
| AGGATTACCGTTATCACACA+GGG | - | chr4_4:46177033-46177052 | Msa0683560:intron | 40.0% | |
| ! | TTAGTTGATACCAATGGAGC+AGG | - | chr4_4:46177129-46177148 | Msa0683560:intron | 40.0% |
| !!! | TGCCCTATTGCTTTTTGAAG+TGG | - | chr4_4:46177155-46177174 | Msa0683560:intron | 40.0% |
| TTTGTAGGAGATGCCTTTGT+TGG | - | chr4_4:46177235-46177254 | Msa0683560:CDS | 40.0% | |
| GCTCTCACACATTCTTCAAT+AGG | + | chr4_4:46177292-46177311 | None:intergenic | 40.0% | |
| ATTGAAGAATGTGTGAGAGC+TGG | - | chr4_4:46177292-46177311 | Msa0683560:intron | 40.0% | |
| TTGAAGAATGTGTGAGAGCT+GGG | - | chr4_4:46177293-46177312 | Msa0683560:intron | 40.0% | |
| !! | AGTTGCACTCTAACTGGTTT+TGG | - | chr4_4:46177454-46177473 | Msa0683560:CDS | 40.0% |
| TCTCGCATCAACAATGGCTT+TGG | - | chr4_4:46174493-46174512 | Msa0683560:three_prime_UTR | 45.0% | |
| !! | GCATCAACAATGGCTTTGGA+AGG | - | chr4_4:46174497-46174516 | Msa0683560:three_prime_UTR | 45.0% |
| !! | GCTTTGGAAGGTGTTCTTCT+TGG | - | chr4_4:46174509-46174528 | Msa0683560:three_prime_UTR | 45.0% |
| !! | GGAAGGTGTTCTTCTTGGTA+TGG | - | chr4_4:46174514-46174533 | Msa0683560:three_prime_UTR | 45.0% |
| ! | TTTAGGGTGTGTTTGGATGG+AGG | - | chr4_4:46175162-46175181 | Msa0683560:CDS | 45.0% |
| TTAGGGTGTGTTTGGATGGA+GGG | - | chr4_4:46175163-46175182 | Msa0683560:CDS | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | chr4_4:46175169-46175188 | Msa0683560:CDS | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | - | chr4_4:46175173-46175192 | Msa0683560:CDS | 45.0% | |
| GAATTCAATCAGGGTTGCTC+AGG | - | chr4_4:46175815-46175834 | Msa0683560:intron | 45.0% | |
| ! | TAGTGGTTGCTTCAAGTTCC+CGG | - | chr4_4:46175933-46175952 | Msa0683560:intron | 45.0% |
| ! | TTACATCGGTTGCATTGGGA+AGG | - | chr4_4:46175965-46175984 | Msa0683560:intron | 45.0% |
| TGCATTGGGAAGGACAAGTT+TGG | - | chr4_4:46175975-46175994 | Msa0683560:intron | 45.0% | |
| GAAGACGAGAATACACCTAC+AGG | - | chr4_4:46176142-46176161 | Msa0683560:intron | 45.0% | |
| CAAACAGCACAAGTTCCTGT+AGG | + | chr4_4:46176160-46176179 | None:intergenic | 45.0% | |
| !! | ACTTGTGCTGTTTGTGTCGT+TGG | - | chr4_4:46176166-46176185 | Msa0683560:intron | 45.0% |
| !! | TTTGTGTCGTTGGTGGTGAA+AGG | - | chr4_4:46176176-46176195 | Msa0683560:CDS | 45.0% |
| TGAGTTCTTCAAGGATCCAC+AGG | - | chr4_4:46176692-46176711 | Msa0683560:intron | 45.0% | |
| TTGACGGCGAAGGATTCTTA+CGG | + | chr4_4:46176729-46176748 | None:intergenic | 45.0% | |
| !! | GGATTTGCATTCTGGGATTC+AGG | - | chr4_4:46176788-46176807 | Msa0683560:intron | 45.0% |
| ! | CATTTTCGAAAGTTCGTGGC+TGG | - | chr4_4:46176851-46176870 | Msa0683560:intron | 45.0% |
| CAAGATATCCCAGTTGCCAA+AGG | - | chr4_4:46176993-46177012 | Msa0683560:intron | 45.0% | |
| TTGTGTGTTCCTGATGCCTT+TGG | + | chr4_4:46177012-46177031 | None:intergenic | 45.0% | |
| AGGCATCAGGAACACACAAA+AGG | - | chr4_4:46177013-46177032 | Msa0683560:intron | 45.0% | |
| ATCAGCACCCTGTGTGATAA+CGG | + | chr4_4:46177043-46177062 | None:intergenic | 45.0% | |
| ACAGCAGAGATGTCGAGAAG+GGG | + | chr4_4:46174545-46174564 | None:intergenic | 50.0% | |
| GACAGCAGAGATGTCGAGAA+GGG | + | chr4_4:46174546-46174565 | None:intergenic | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | chr4_4:46175172-46175191 | Msa0683560:CDS | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | - | chr4_4:46175174-46175193 | Msa0683560:CDS | 50.0% | |
| GGTTTATGAAGGGAAGGGAG+GGG | + | chr4_4:46175371-46175390 | None:intergenic | 50.0% | |
| GGGTTTATGAAGGGAAGGGA+GGG | + | chr4_4:46175372-46175391 | None:intergenic | 50.0% | |
| AGGGTTTATGAAGGGAAGGG+AGG | + | chr4_4:46175373-46175392 | None:intergenic | 50.0% | |
| GAGTGTCAGTGTTAGTGTCG+TGG | + | chr4_4:46175453-46175472 | None:intergenic | 50.0% | |
| AACGTGGAGTACATTGCTGG+AGG | - | chr4_4:46175689-46175708 | Msa0683560:intron | 50.0% | |
| ACCGATGTAACTAGTGGCTC+CGG | + | chr4_4:46175955-46175974 | None:intergenic | 50.0% | |
| ! | CAGAAGTGGATTCTACGGTC+TGG | + | chr4_4:46176083-46176102 | None:intergenic | 50.0% |
| !! | TGTGCTGTTTGTGTCGTTGG+TGG | - | chr4_4:46176169-46176188 | Msa0683560:intron | 50.0% |
| TACGGAAGAGCTTTCTCCTG+TGG | + | chr4_4:46176711-46176730 | None:intergenic | 50.0% | |
| TGACCAGACCGATAATGTCG+AGG | - | chr4_4:46176960-46176979 | Msa0683560:intron | 50.0% | |
| TCTCCTCGACATTATCGGTC+TGG | + | chr4_4:46176966-46176985 | None:intergenic | 50.0% | |
| TCCTGATGCCTTTGGCAACT+GGG | + | chr4_4:46177004-46177023 | None:intergenic | 50.0% | |
| TTCCTGATGCCTTTGGCAAC+TGG | + | chr4_4:46177005-46177024 | None:intergenic | 50.0% | |
| CCATCTTGAGCAACACACAC+GGG | + | chr4_4:46177066-46177085 | None:intergenic | 50.0% | |
| CCCATCTTGAGCAACACACA+CGG | + | chr4_4:46177067-46177086 | None:intergenic | 50.0% | |
| ! | CCGTGTGTGTTGCTCAAGAT+GGG | - | chr4_4:46177064-46177083 | Msa0683560:intron | 50.0% |
| ! | TAGGGCATTACCTGCTCCAT+TGG | + | chr4_4:46177142-46177161 | None:intergenic | 50.0% |
| GTAGGAGATGCCTTTGTTGG+AGG | - | chr4_4:46177238-46177257 | Msa0683560:CDS | 50.0% | |
| AAAATCCCCGACTAGGGAGA+AGG | - | chr4_4:46177486-46177505 | Msa0683560:CDS | 50.0% | |
| AAATCCCCGACTAGGGAGAA+GGG | - | chr4_4:46177487-46177506 | Msa0683560:CDS | 50.0% | |
| AAGGGGTGAAGAAGTTGTCG+AGG | - | chr4_4:46177505-46177524 | Msa0683560:exon | 50.0% | |
| AGGGGTGAAGAAGTTGTCGA+GGG | - | chr4_4:46177506-46177525 | Msa0683560:exon | 50.0% | |
| CGACAGCAGAGATGTCGAGA+AGG | + | chr4_4:46174547-46174566 | None:intergenic | 55.0% | |
| ATGGAGGGTTTAGGAGGGGA+AGG | - | chr4_4:46175178-46175197 | Msa0683560:CDS | 55.0% | |
| TGGAGGGTTTAGGAGGGGAA+GGG | - | chr4_4:46175179-46175198 | Msa0683560:CDS | 55.0% | |
| GTCAGTGTTAGTGTCGTGGC+CGG | + | chr4_4:46175449-46175468 | None:intergenic | 55.0% | |
| !! | GTCAGTCGGTGTCAGACATC+TGG | - | chr4_4:46175514-46175533 | Msa0683560:CDS | 55.0% |
| CCGATGTAACTAGTGGCTCC+GGG | + | chr4_4:46175954-46175973 | None:intergenic | 55.0% | |
| CCCGGAGCCACTAGTTACAT+CGG | - | chr4_4:46175951-46175970 | Msa0683560:intron | 55.0% | |
| TGGGAAGGACAAGTTTGGCG+AGG | - | chr4_4:46175980-46175999 | Msa0683560:CDS | 55.0% | |
| !! | CGTTGGTGGTGAAAGGTGAG+AGG | - | chr4_4:46176183-46176202 | Msa0683560:CDS | 55.0% |
| TGGATTCGGGGGATACAGTG+AGG | + | chr4_4:46176522-46176541 | None:intergenic | 55.0% | |
| TTCGAAAGTTCGTGGCTGGG+AGG | - | chr4_4:46176855-46176874 | Msa0683560:intron | 55.0% | |
| !! | TCCCAGTTGCCAAAGGCATC+AGG | - | chr4_4:46177000-46177019 | Msa0683560:intron | 55.0% |
| ! | CCCGTGTGTGTTGCTCAAGA+TGG | - | chr4_4:46177063-46177082 | Msa0683560:intron | 55.0% |
| CTTCTCTGGGTAAGTGCAGC+CGG | + | chr4_4:46177350-46177369 | None:intergenic | 55.0% | |
| AATCCCCGACTAGGGAGAAG+GGG | - | chr4_4:46177488-46177507 | Msa0683560:CDS | 55.0% | |
| TTCACCCCTTCTCCCTAGTC+GGG | + | chr4_4:46177495-46177514 | None:intergenic | 55.0% | |
| CTTCACCCCTTCTCCCTAGT+CGG | + | chr4_4:46177496-46177515 | None:intergenic | 55.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr4_4:46175182-46175201 | Msa0683560:CDS | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr4_4:46175183-46175202 | Msa0683560:CDS | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr4_4:46175184-46175203 | Msa0683560:CDS | 60.0% | |
| TCACCCCTTCTCCCTAGTCG+GGG | + | chr4_4:46177494-46177513 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 46174241 | 46177775 | 46174241 | ID=Msa0683560;Name=Msa0683560 |
| chr4_4 | mRNA | 46174241 | 46177775 | 46174241 | ID=Msa0683560-mRNA-1;Parent=Msa0683560;Name=Msa0683560-mRNA-1;_AED=0.12;_eAED=0.12;_QI=265|0.91|0.92|1|0.91|0.84|13|371|344 |
| chr4_4 | exon | 46174241 | 46174363 | 46174241 | ID=Msa0683560-mRNA-1:exon:11391;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46174384 | 46174774 | 46174384 | ID=Msa0683560-mRNA-1:exon:11390;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46174866 | 46175049 | 46174866 | ID=Msa0683560-mRNA-1:exon:11389;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46175140 | 46175206 | 46175140 | ID=Msa0683560-mRNA-1:exon:11388;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46175289 | 46175359 | 46175289 | ID=Msa0683560-mRNA-1:exon:11387;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46175437 | 46175534 | 46175437 | ID=Msa0683560-mRNA-1:exon:11386;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46175629 | 46175705 | 46175629 | ID=Msa0683560-mRNA-1:exon:11385;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46175819 | 46175886 | 46175819 | ID=Msa0683560-mRNA-1:exon:11384;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46175979 | 46176080 | 46175979 | ID=Msa0683560-mRNA-1:exon:11383;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46176171 | 46176211 | 46176171 | ID=Msa0683560-mRNA-1:exon:11382;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46176306 | 46176352 | 46176306 | ID=Msa0683560-mRNA-1:exon:11381;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46177216 | 46177269 | 46177216 | ID=Msa0683560-mRNA-1:exon:11380;Parent=Msa0683560-mRNA-1 |
| chr4_4 | exon | 46177428 | 46177775 | 46177428 | ID=Msa0683560-mRNA-1:exon:11379;Parent=Msa0683560-mRNA-1 |
| chr4_4 | five_prime_UTR | 46177511 | 46177775 | 46177511 | ID=Msa0683560-mRNA-1:five_prime_utr;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46177428 | 46177510 | 46177428 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46177216 | 46177269 | 46177216 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46176306 | 46176352 | 46176306 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46176171 | 46176211 | 46176171 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46175979 | 46176080 | 46175979 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46175819 | 46175886 | 46175819 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46175629 | 46175705 | 46175629 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46175437 | 46175534 | 46175437 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46175289 | 46175359 | 46175289 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46175140 | 46175206 | 46175140 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46174866 | 46175049 | 46174866 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | CDS | 46174632 | 46174774 | 46174632 | ID=Msa0683560-mRNA-1:cds;Parent=Msa0683560-mRNA-1 |
| chr4_4 | three_prime_UTR | 46174384 | 46174631 | 46174384 | ID=Msa0683560-mRNA-1:three_prime_utr;Parent=Msa0683560-mRNA-1 |
| chr4_4 | three_prime_UTR | 46174241 | 46174363 | 46174241 | ID=Msa0683560-mRNA-1:three_prime_utr;Parent=Msa0683560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
