AlfalfaGEDB | Msa0037070

M. sativa cultivar zhongmu-4 / Msa0037070

KEGG: K06688
GO: GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007088 GO:0007346 GO:0008150 GO:0008152 GO:0008283 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0010564 GO:0010965 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0030071 GO:0030163 GO:0031145 GO:0031625 GO:0032446 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0036211 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0051603 GO:0051726 GO:0051783 GO:0051983 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901990 GO:1902099 GO:1905818
PFAM: PF00179.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0037070	sp\|Q9LJZ5\|UBC19_ARATH	66.906	139	44	2	37	175	32	168	1.19e-61	193

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0037070	Msa0069200	0.906843	9.616825e-81	-8.615850e-47
Msa0037070	Msa0177200	0.851117	1.093503e-60	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0037070	MtrunA17_Chr1g0199951	87.037	216	4	2	1	216	1	192	6.93e-135	376
Msa0037070	MtrunA17_Chr4g0038891	57.219	187	55	3	27	213	18	179	2.04e-67	205
Msa0037070	MtrunA17_Chr5g0396451	62.733	161	58	2	15	175	6	164	7.65e-67	203
Msa0037070	MtrunA17_Chr1g0154011	44.030	134	72	3	43	175	3	134	2.69e-31	112
Msa0037070	MtrunA17_Chr4g0037011	46.032	126	66	2	43	168	3	126	7.09e-31	110
Msa0037070	MtrunA17_Chr2g0316201	42.963	135	75	2	40	174	4	136	1.47e-30	110
Msa0037070	MtrunA17_Chr4g0060351	42.222	135	76	2	39	173	2	134	3.62e-30	109
Msa0037070	MtrunA17_Chr5g0432831	44.531	128	69	2	43	170	3	128	3.80e-30	108
Msa0037070	MtrunA17_Chr3g0108261	44.531	128	69	2	43	170	3	128	3.84e-30	108
Msa0037070	MtrunA17_Chr8g0362321	41.481	135	77	2	39	173	2	134	8.37e-30	108
Msa0037070	MtrunA17_Chr7g0275361	43.750	128	70	2	43	170	3	128	1.00e-29	107
Msa0037070	MtrunA17_Chr2g0316211	43.846	130	71	2	45	174	9	136	1.04e-29	108
Msa0037070	MtrunA17_Chr8g0369311	41.007	139	79	3	38	175	54	190	3.13e-28	105
Msa0037070	MtrunA17_Chr3g0131871	36.842	152	92	4	45	193	6	156	3.68e-27	102
Msa0037070	MtrunA17_Chr8g0378601	44.915	118	61	2	37	151	15	131	8.84e-26	98.2
Msa0037070	MtrunA17_Chr3g0139901	41.509	106	60	2	58	162	21	125	1.02e-22	90.1
Msa0037070	MtrunA17_Chr4g0031181	36.434	129	68	2	67	182	30	157	3.03e-20	84.0
Msa0037070	MtrunA17_Chr2g0328001	38.655	119	59	2	67	172	30	147	1.44e-19	82.0
Msa0037070	MtrunA17_Chr4g0059291	35.385	130	79	3	40	168	2	127	6.15e-18	78.2
Msa0037070	MtrunA17_Chr8g0348701	35.385	130	79	3	40	168	2	127	9.23e-18	77.8
Msa0037070	MtrunA17_Chr8g0387131	33.077	130	82	3	40	168	2	127	1.20e-16	74.7
Msa0037070	MtrunA17_Chr5g0401831	41.837	98	53	3	66	160	32	128	2.05e-16	73.6
Msa0037070	MtrunA17_Chr7g0254701	31.544	149	95	4	41	188	10	152	2.84e-16	75.5
Msa0037070	MtrunA17_Chr4g0053191	39.604	101	58	2	70	168	37	136	2.95e-16	73.2
Msa0037070	MtrunA17_Chr8g0372391	36.806	144	74	5	43	182	17	147	1.27e-15	71.6
Msa0037070	MtrunA17_Chr5g0403591	30.435	138	92	3	35	171	22	156	1.38e-15	72.0
Msa0037070	MtrunA17_Chr5g0404931	39.175	97	50	3	45	137	19	110	1.27e-13	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0037070	AT3G20060.1	66.906	139	44	2	37	175	32	168	1.21e-62	193
Msa0037070	AT3G20060.2	68.000	125	38	2	51	175	1	123	4.10e-57	177
Msa0037070	AT1G50490.1	65.101	149	50	2	27	175	21	167	5.34e-57	179
Msa0037070	AT2G16740.1	44.776	134	71	3	43	175	3	134	1.34e-31	113
Msa0037070	AT1G16890.2	44.444	135	73	2	40	174	4	136	5.97e-31	111
Msa0037070	AT1G16890.3	41.958	143	74	2	40	174	4	145	6.67e-31	111
Msa0037070	AT1G78870.2	42.963	135	75	2	40	174	4	136	2.50e-30	110
Msa0037070	AT1G14400.1	42.222	135	76	2	39	173	2	134	2.73e-30	109
Msa0037070	AT1G14400.2	42.222	135	76	2	39	173	2	134	2.73e-30	109
Msa0037070	AT2G02760.1	42.222	135	76	2	39	173	2	134	4.39e-30	109
Msa0037070	AT2G02760.2	42.222	135	76	2	39	173	2	134	4.39e-30	109
Msa0037070	AT2G02760.4	42.222	135	76	2	39	173	2	134	4.39e-30	109
Msa0037070	AT2G02760.3	42.222	135	76	2	39	173	2	134	4.39e-30	109
Msa0037070	AT5G41700.4	42.969	128	72	1	43	170	3	129	4.40e-30	109
Msa0037070	AT1G64230.2	44.531	128	69	2	43	170	3	128	5.66e-30	108
Msa0037070	AT1G64230.1	44.531	128	69	2	43	170	3	128	5.66e-30	108
Msa0037070	AT4G27960.1	43.284	134	73	3	43	175	3	134	7.98e-30	108
Msa0037070	AT5G56150.1	42.520	127	71	2	43	169	3	127	8.42e-30	108
Msa0037070	AT5G53300.2	43.284	134	73	3	43	175	3	134	1.34e-29	107
Msa0037070	AT5G53300.4	43.284	134	73	3	43	175	3	134	1.34e-29	107
Msa0037070	AT5G53300.1	43.284	134	73	3	43	175	3	134	1.34e-29	107
Msa0037070	AT5G41700.5	43.750	128	70	2	43	170	3	128	1.55e-29	107
Msa0037070	AT5G41700.2	43.750	128	70	2	43	170	3	128	1.55e-29	107
Msa0037070	AT5G41700.1	43.750	128	70	2	43	170	3	128	1.55e-29	107
Msa0037070	AT3G08690.2	43.750	128	70	2	43	170	3	128	2.08e-29	107
Msa0037070	AT3G08690.1	43.750	128	70	2	43	170	3	128	2.08e-29	107
Msa0037070	AT5G62540.1	42.963	135	75	2	39	173	2	134	2.22e-29	107
Msa0037070	AT4G27960.2	43.284	134	73	3	43	175	33	164	1.13e-28	106
Msa0037070	AT1G64230.3	42.029	138	67	3	43	170	3	137	1.90e-28	105
Msa0037070	AT5G50870.1	42.742	124	69	2	45	167	6	128	7.44e-28	104
Msa0037070	AT5G50870.2	42.742	124	69	2	45	167	6	128	7.73e-28	105
Msa0037070	AT1G64230.5	46.667	105	55	1	66	170	67	170	1.33e-27	103
Msa0037070	AT1G64230.4	46.667	105	55	1	66	170	67	170	1.33e-27	103
Msa0037070	AT1G16890.1	50.515	97	47	1	78	174	8	103	2.71e-27	101
Msa0037070	AT1G78870.4	50.515	97	47	1	78	174	8	103	2.95e-27	100
Msa0037070	AT3G08700.2	42.963	135	73	4	43	175	3	135	1.73e-26	100
Msa0037070	AT3G08700.1	42.963	135	73	4	43	175	3	135	1.73e-26	100
Msa0037070	AT1G78870.1	50.000	98	47	2	78	174	8	104	6.84e-26	97.4
Msa0037070	AT3G13550.1	40.580	138	76	4	40	173	32	167	1.13e-24	96.3
Msa0037070	AT5G41700.3	43.396	106	59	1	43	148	3	107	1.20e-24	95.1
Msa0037070	AT3G13550.2	43.333	120	63	3	40	155	32	150	1.83e-24	95.5
Msa0037070	AT5G25760.1	41.803	122	67	3	58	176	21	141	2.03e-24	94.7
Msa0037070	AT5G25760.2	41.803	122	67	3	58	176	21	141	2.03e-24	94.7
Msa0037070	AT1G36340.2	41.322	121	68	2	41	161	8	125	2.20e-24	94.7
Msa0037070	AT1G36340.1	41.322	121	68	2	41	161	8	125	2.20e-24	94.7
Msa0037070	AT5G56150.2	44.211	95	52	1	43	137	3	96	2.43e-24	93.2
Msa0037070	AT5G53300.3	46.316	95	50	1	43	137	3	96	4.62e-24	92.4
Msa0037070	AT1G78870.3	42.727	110	62	1	40	149	4	112	1.50e-23	91.3
Msa0037070	AT5G59300.1	38.655	119	59	2	67	172	30	147	8.74e-20	82.8
Msa0037070	AT1G63800.1	37.692	130	76	3	40	168	2	127	4.88e-19	81.6
Msa0037070	AT3G55380.1	35.537	121	64	2	67	174	31	150	8.97e-19	80.5
Msa0037070	AT3G46460.1	37.815	119	60	2	67	172	30	147	1.38e-18	79.7
Msa0037070	AT5G41340.1	36.154	130	78	3	40	168	2	127	2.92e-18	79.3
Msa0037070	AT2G32790.1	42.241	116	61	3	63	175	51	163	1.54e-16	74.7
Msa0037070	AT2G46030.5	33.571	140	87	4	40	177	2	137	2.69e-16	74.3
Msa0037070	AT2G46030.1	33.571	140	87	4	40	177	2	137	2.69e-16	74.3
Msa0037070	AT5G05080.2	34.375	128	82	2	41	168	10	135	6.80e-16	74.3
Msa0037070	AT5G05080.3	34.375	128	82	2	41	168	10	135	6.80e-16	74.3
Msa0037070	AT5G05080.1	34.375	128	82	2	41	168	10	135	6.80e-16	74.3
Msa0037070	AT5G05080.4	34.375	128	82	2	41	168	10	135	6.80e-16	74.3
Msa0037070	AT2G46030.3	32.895	152	88	5	28	177	70	209	9.54e-16	73.9
Msa0037070	AT3G57870.1	40.860	93	52	2	70	160	38	129	2.11e-15	71.2
Msa0037070	AT3G24515.1	37.313	134	67	6	37	156	2	132	3.10e-15	73.9
Msa0037070	AT1G63800.2	37.069	116	68	3	54	168	1	112	3.20e-15	70.9
Msa0037070	AT2G18600.1	34.862	109	68	3	64	171	52	158	3.22e-15	71.2
Msa0037070	AT2G18600.2	34.862	109	68	3	64	171	52	158	3.22e-15	71.2
Msa0037070	AT4G36800.2	31.250	128	83	4	45	171	34	157	4.35e-15	70.9
Msa0037070	AT4G36800.1	31.250	128	83	4	45	171	34	157	4.35e-15	70.9
Msa0037070	AT4G36410.1	38.835	103	54	3	39	137	13	110	1.95e-14	68.6
Msa0037070	AT5G41340.2	38.095	84	51	1	86	168	9	92	1.11e-13	66.6
Msa0037070	AT1G75440.1	39.394	99	51	3	43	137	17	110	1.32e-13	66.6
Msa0037070	AT5G42990.1	35.772	123	70	3	45	163	19	136	2.45e-13	65.9
Msa0037070	AT3G24515.3	38.462	91	51	2	70	156	68	157	2.49e-13	68.6
Msa0037070	AT1G45050.1	35.772	123	70	3	45	163	19	136	3.77e-13	65.1
Msa0037070	AT3G55380.2	29.032	155	62	4	67	174	31	184	4.94e-13	65.9
Msa0037070	AT3G46460.3	35.354	99	50	2	87	172	8	105	1.00e-12	63.2
Msa0037070	AT3G46460.2	35.354	99	50	2	87	172	8	105	1.00e-12	63.2
Msa0037070	AT2G46030.4	34.483	116	71	3	54	168	19	130	1.13e-12	64.3
Msa0037070	AT2G46030.2	34.483	116	71	3	54	168	19	130	1.13e-12	64.3

Find 85 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCACTTGGGGTGGTTTAAA+AGG	0.191154	1_1:+65980970	None:intergenic
AATTGTATAAATCAACTTTC+AGG	0.222701	1_1:+65980107	None:intergenic
AATGAAGTTGTTACCGAAAA+AGG	0.222980	1_1:+65982120	None:intergenic
CATCCAAATGTTGACCAGTT+TGG	0.280045	1_1:-65980928	Msa0037070:CDS
TCCCCAATGGAAGTCCTTAT+AGG	0.294653	1_1:+65982226	None:intergenic
CAGACTACAGAAGGAATTAA+TGG	0.316587	1_1:-65981489	Msa0037070:CDS
AACAACAATCTCAACCTATA+AGG	0.341938	1_1:-65982240	Msa0037070:five_prime_UTR
AGGAGAAGCGAGTGGCTTCT+TGG	0.342515	1_1:+65981807	None:intergenic
TTTAGAGGGCTCTCCAAGTT+AGG	0.344635	1_1:+65980474	None:intergenic
TCTGCAGCATAGTTGTTTAG+AGG	0.381020	1_1:+65980459	None:intergenic
TTGCCAAACTGGTCAACATT+TGG	0.388830	1_1:+65980925	None:intergenic
CTAGACAAATGTTGCCAAAC+TGG	0.389058	1_1:+65980914	None:intergenic
AGAAAATTCCCCTGTTGAAT+CGG	0.394486	1_1:-65981857	Msa0037070:CDS
GGTGGTTTAAAAGGATAGTT+CGG	0.395297	1_1:+65980979	None:intergenic
CGACTGACCGCCGATTCAAC+AGG	0.398059	1_1:+65981847	None:intergenic
AACTTTGGGTGCGGAACACT+TGG	0.406187	1_1:-65982291	Msa0037070:five_prime_UTR
ACAACTATGCTGCAGAGCTT+TGG	0.406851	1_1:-65980452	Msa0037070:CDS
TTGTATCCTTAACCAGTGTC+CGG	0.408928	1_1:-65982094	Msa0037070:five_prime_UTR
ACATGGATTGGCACAATTCA+AGG	0.410583	1_1:-65981057	Msa0037070:CDS
GTGGTTTAAAAGGATAGTTC+GGG	0.414728	1_1:+65980980	None:intergenic
TCTGTCTATACAAAGTCTAT+TGG	0.417973	1_1:-65980578	Msa0037070:CDS
AACCTATAAGGACTTCCATT+GGG	0.430137	1_1:-65982228	Msa0037070:five_prime_UTR
CTTCGGCGGTGGTGTTTGAT+CGG	0.437236	1_1:+65981878	None:intergenic
TCTGAGCCGTTGATCTAATT+AGG	0.440454	1_1:-65981927	Msa0037070:five_prime_UTR
TAAATATGAGAAATGTTAAT+CGG	0.440658	1_1:+65982067	None:intergenic
TATCTATGAGTCATGTTAAC+CGG	0.441261	1_1:-65982189	Msa0037070:five_prime_UTR
GGTGCCCCGGACACTGGTTA+AGG	0.442611	1_1:+65982088	None:intergenic
CAGATGAGTGGAGGAGATCT+TGG	0.446524	1_1:-65981114	Msa0037070:CDS
CATTTGTCTAGACATCCTTC+AGG	0.450655	1_1:-65980902	Msa0037070:intron
TGTCTCCGGAGCACTGGTTA+AGG	0.457547	1_1:-65982166	Msa0037070:five_prime_UTR
GGCACAATTCAAGGTGGAAA+AGG	0.458217	1_1:-65981048	Msa0037070:CDS
TCTAACAGCAGAGCCTAACT+TGG	0.460379	1_1:-65980487	Msa0037070:intron
TGGAAAAGGAACTCCTTATG+AGG	0.468163	1_1:-65981034	Msa0037070:CDS
GGAGTATCTGCTTTCCCTGA+TGG	0.470606	1_1:-65981093	Msa0037070:CDS
GCCTCCGTTGATCGGAATCA+TGG	0.476412	1_1:-65981905	Msa0037070:exon
GTCCACAAGCAGTATTTAGC+TGG	0.486859	1_1:-65980143	Msa0037070:CDS
ATAAATCAACTTTCAGGTGC+AGG	0.493849	1_1:+65980113	None:intergenic
GTCATGTTAACCGGTGTCTC+CGG	0.493906	1_1:-65982180	Msa0037070:five_prime_UTR
TGTATCCTTAACCAGTGTCC+GGG	0.495146	1_1:-65982093	Msa0037070:five_prime_UTR
TTATAAGATAAACCCTCATA+AGG	0.500118	1_1:+65981021	None:intergenic
CAACCTATAAGGACTTCCAT+TGG	0.505422	1_1:-65982229	Msa0037070:five_prime_UTR
AACCGGTGTCTCCGGAGCAC+TGG	0.509797	1_1:-65982172	Msa0037070:five_prime_UTR
TCATGCAGATTTCAAGAGAA+TGG	0.510290	1_1:-65980165	Msa0037070:CDS
GACTAAAACAACTTTGGGTG+CGG	0.515933	1_1:-65982300	Msa0037070:five_prime_UTR
CTAATTAGGCCTCCGTTGAT+CGG	0.517352	1_1:-65981913	Msa0037070:five_prime_UTR
GTCTCAAATTTCACTTGGGG+TGG	0.517777	1_1:+65980961	None:intergenic
TGCAGAGCTTTGGAATGATA+AGG	0.522423	1_1:-65980442	Msa0037070:CDS
GAAGGAATTAATGGCTCTCA+TGG	0.522770	1_1:-65981480	Msa0037070:intron
TGTATCCTTAACCAGTGCTC+CGG	0.526902	1_1:+65982161	None:intergenic
GAAACGGAAGTTGTGTCAGC+AGG	0.527352	1_1:+65981781	None:intergenic
GAAGTTGTGTCAGCAGGAAG+AGG	0.534120	1_1:+65981787	None:intergenic
CGTCGTCTCAAATTTCACTT+GGG	0.535928	1_1:+65980957	None:intergenic
AGAATTTCGCTGAAAGTGGT+AGG	0.537605	1_1:+65982016	None:intergenic
TTAATCGGTGCCCCGGACAC+TGG	0.538660	1_1:+65982082	None:intergenic
GGAGATGAACCTTTGAGAAA+CGG	0.539253	1_1:+65981765	None:intergenic
ACGTCGTCTCAAATTTCACT+TGG	0.545034	1_1:+65980956	None:intergenic
TCAGTTATTTCTTTCCCCAA+TGG	0.550867	1_1:+65982213	None:intergenic
CTGCAGCATAGTTGTTTAGA+GGG	0.556199	1_1:+65980460	None:intergenic
ACACAACTTCCGTTTCTCAA+AGG	0.558610	1_1:-65981774	Msa0037070:intron
AGAAATGTTAATCGGTGCCC+CGG	0.563759	1_1:+65982075	None:intergenic
TGGTTTAAAAGGATAGTTCG+GGG	0.571786	1_1:+65980981	None:intergenic
CTCCAGCTAAATACTGCTTG+TGG	0.577463	1_1:+65980141	None:intergenic
ACCTCCATGATTCCGATCAA+CGG	0.578245	1_1:+65981901	None:intergenic
AACCAGTGCTCCGGAGACAC+CGG	0.590723	1_1:+65982170	None:intergenic
TTGTGATTGTATAGGACAAG+TGG	0.591402	1_1:-65980630	Msa0037070:intron
GGAAAAGGAACTCCTTATGA+GGG	0.594287	1_1:-65981033	Msa0037070:CDS
GTGCAACTGCAGACTACAGA+AGG	0.594928	1_1:-65981498	Msa0037070:intron
GGTTTAAAAGGATAGTTCGG+GGG	0.602685	1_1:+65980982	None:intergenic
AGAAGCGAGTGGCTTCTTGG+AGG	0.606644	1_1:+65981810	None:intergenic
TCTATACAAAGTCTATTGGA+AGG	0.607196	1_1:-65980574	Msa0037070:intron
ACCTATAAGGACTTCCATTG+GGG	0.609299	1_1:-65982227	Msa0037070:five_prime_UTR
GACTGACCGCCGATTCAACA+GGG	0.609320	1_1:+65981848	None:intergenic
CGGAGGCCTAATTAGATCAA+CGG	0.610937	1_1:+65981921	None:intergenic
AAATTCCCCTGTTGAATCGG+CGG	0.628092	1_1:-65981854	Msa0037070:CDS
GTATCCTTAACCAGTGTCCG+GGG	0.638635	1_1:-65982092	Msa0037070:five_prime_UTR
GAGCTTTGGAATGATAAGGA+AGG	0.647349	1_1:-65980438	Msa0037070:intron
GCTTCTTGGAGGATGATCGA+CGG	0.652262	1_1:+65981821	None:intergenic
GCAGGAAGAGGAGAAGCGAG+TGG	0.668776	1_1:+65981799	None:intergenic
GTTTAAAAGGATAGTTCGGG+GGG	0.670883	1_1:+65980983	None:intergenic
GTCGTCTCAAATTTCACTTG+GGG	0.674521	1_1:+65980958	None:intergenic
TCCATGATTCCGATCAACGG+AGG	0.675004	1_1:+65981904	None:intergenic
TCCGTTGATCGGAATCATGG+AGG	0.688201	1_1:-65981902	Msa0037070:exon
TCTTGGAGGATGATCGACGG+TGG	0.707980	1_1:+65981824	None:intergenic
ACTGACCGCCGATTCAACAG+GGG	0.708293	1_1:+65981849	None:intergenic
TGGATTGGCACAATTCAAGG+TGG	0.712983	1_1:-65981054	Msa0037070:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGAAATTTAGAAATATTTAA+GGG	+	chr1_1:65980707-65980726	None:intergenic	10.0%
!!	ATGAAATTTAGAAATATTTA+AGG	+	chr1_1:65980708-65980727	None:intergenic	10.0%
!!	TGAAATTTAGAAATATTTAA+GGG	+	chr1_1:65980707-65980726	None:intergenic	10.0%
!!	ATGAAATTTAGAAATATTTA+AGG	+	chr1_1:65980708-65980727	None:intergenic	10.0%
!!	TAAATATGAGAAATGTTAAT+CGG	+	chr1_1:65980378-65980397	None:intergenic	15.0%
!!	AAATTTAGAAATATTTAAGG+GGG	+	chr1_1:65980705-65980724	None:intergenic	15.0%
!!	GAAATTTAGAAATATTTAAG+GGG	+	chr1_1:65980706-65980725	None:intergenic	15.0%
!!	AAAAAAACTAAATTAGAAGA+TGG	+	chr1_1:65980734-65980753	None:intergenic	15.0%
!!!	TTAAATTTTAAACTTTGATG+TGG	-	chr1_1:65980876-65980895	Msa0037070:intron	15.0%
!!!	CAGTCAATTTTTTTATTTTT+AGG	-	chr1_1:65981010-65981029	Msa0037070:CDS	15.0%
!!	TCATTAAGAAACTAAATTTA+TGG	-	chr1_1:65981226-65981245	Msa0037070:intron	15.0%
!!	GCATTCATATTAAATATAAT+TGG	+	chr1_1:65981749-65981768	None:intergenic	15.0%
!!	TAAATATGAGAAATGTTAAT+CGG	+	chr1_1:65980378-65980397	None:intergenic	15.0%
!!	AAATTTAGAAATATTTAAGG+GGG	+	chr1_1:65980705-65980724	None:intergenic	15.0%
!!	GAAATTTAGAAATATTTAAG+GGG	+	chr1_1:65980706-65980725	None:intergenic	15.0%
!!	AAAAAAACTAAATTAGAAGA+TGG	+	chr1_1:65980734-65980753	None:intergenic	15.0%
!!!	TTAAATTTTAAACTTTGATG+TGG	-	chr1_1:65980876-65980895	Msa0037070:intron	15.0%
!!!	CAGTCAATTTTTTTATTTTT+AGG	-	chr1_1:65981010-65981029	Msa0037070:CDS	15.0%
!!	TCATTAAGAAACTAAATTTA+TGG	-	chr1_1:65981226-65981245	Msa0037070:intron	15.0%
!!	GCATTCATATTAAATATAAT+TGG	+	chr1_1:65981749-65981768	None:intergenic	15.0%
!!!	AATTTTGACTAAAACAACTT+TGG	-	chr1_1:65980136-65980155	Msa0037070:CDS	20.0%
!!!	ATTTTGACTAAAACAACTTT+GGG	-	chr1_1:65980137-65980156	Msa0037070:CDS	20.0%
!!	AATTTAGAAATATTTAAGGG+GGG	+	chr1_1:65980704-65980723	None:intergenic	20.0%
!!	TTAAAAAAATCACATAATCC+AGG	-	chr1_1:65981660-65981679	Msa0037070:intron	20.0%
!!	TAAAAAAATCACATAATCCA+GGG	-	chr1_1:65981661-65981680	Msa0037070:intron	20.0%
!!	TCATCTACATATTTAATACT+AGG	+	chr1_1:65981771-65981790	None:intergenic	20.0%
!!	AGATCAATTGAACTAAAATT+TGG	+	chr1_1:65982121-65982140	None:intergenic	20.0%
!!!	AATTTTGACTAAAACAACTT+TGG	-	chr1_1:65980136-65980155	Msa0037070:CDS	20.0%
!!!	ATTTTGACTAAAACAACTTT+GGG	-	chr1_1:65980137-65980156	Msa0037070:CDS	20.0%
!!	AATTTAGAAATATTTAAGGG+GGG	+	chr1_1:65980704-65980723	None:intergenic	20.0%
!!	TTAAAAAAATCACATAATCC+AGG	-	chr1_1:65981660-65981679	Msa0037070:intron	20.0%
!!	TAAAAAAATCACATAATCCA+GGG	-	chr1_1:65981661-65981680	Msa0037070:intron	20.0%
!!	TCATCTACATATTTAATACT+AGG	+	chr1_1:65981771-65981790	None:intergenic	20.0%
!!	AGATCAATTGAACTAAAATT+TGG	+	chr1_1:65982121-65982140	None:intergenic	20.0%
!!!	TTTTTAGTCTTGATCAGTTT+TGG	-	chr1_1:65980750-65980769	Msa0037070:intron	25.0%
!	ATCAAATTTCATTTCATGCA+TGG	+	chr1_1:65980826-65980845	None:intergenic	25.0%
!	ACACCATAAATTTGACAATA+AGG	+	chr1_1:65981036-65981055	None:intergenic	25.0%
!	ATTGTCAAATTTATGGTGTT+TGG	-	chr1_1:65981037-65981056	Msa0037070:CDS	25.0%
!	GTACTTTACTTCTTCATATT+AGG	-	chr1_1:65981160-65981179	Msa0037070:intron	25.0%
!	TTTACTTCTTCATATTAGGT+TGG	-	chr1_1:65981164-65981183	Msa0037070:intron	25.0%
!	TTACTTCTTCATATTAGGTT+GGG	-	chr1_1:65981165-65981184	Msa0037070:intron	25.0%
!	AATCATGTGAAATATGTTGT+TGG	-	chr1_1:65981189-65981208	Msa0037070:intron	25.0%
!	ATCATGTGAAATATGTTGTT+GGG	-	chr1_1:65981190-65981209	Msa0037070:intron	25.0%
!	AGTTTCTTAATGATACAAGA+AGG	+	chr1_1:65981219-65981238	None:intergenic	25.0%
!	TAAAAATATTCTCACCATCA+GGG	+	chr1_1:65981366-65981385	None:intergenic	25.0%
!!!	ATGGTGAGAATATTTTTACA+TGG	-	chr1_1:65981368-65981387	Msa0037070:intron	25.0%
!!!	GAGAATATTTTTACATGGAT+TGG	-	chr1_1:65981373-65981392	Msa0037070:intron	25.0%
!	TTATAAGATAAACCCTCATA+AGG	+	chr1_1:65981424-65981443	None:intergenic	25.0%
!!!	GGTTTTAATCTTTGTAGATT+TGG	-	chr1_1:65982215-65982234	Msa0037070:five_prime_UTR	25.0%
!!!	TTTTTAGTCTTGATCAGTTT+TGG	-	chr1_1:65980750-65980769	Msa0037070:intron	25.0%
!	ATCAAATTTCATTTCATGCA+TGG	+	chr1_1:65980826-65980845	None:intergenic	25.0%
!	ACACCATAAATTTGACAATA+AGG	+	chr1_1:65981036-65981055	None:intergenic	25.0%
!	ATTGTCAAATTTATGGTGTT+TGG	-	chr1_1:65981037-65981056	Msa0037070:CDS	25.0%
!	GTACTTTACTTCTTCATATT+AGG	-	chr1_1:65981160-65981179	Msa0037070:intron	25.0%
!	TTTACTTCTTCATATTAGGT+TGG	-	chr1_1:65981164-65981183	Msa0037070:intron	25.0%
!	TTACTTCTTCATATTAGGTT+GGG	-	chr1_1:65981165-65981184	Msa0037070:intron	25.0%
!	AATCATGTGAAATATGTTGT+TGG	-	chr1_1:65981189-65981208	Msa0037070:intron	25.0%
!	ATCATGTGAAATATGTTGTT+GGG	-	chr1_1:65981190-65981209	Msa0037070:intron	25.0%
!	AGTTTCTTAATGATACAAGA+AGG	+	chr1_1:65981219-65981238	None:intergenic	25.0%
!	TAAAAATATTCTCACCATCA+GGG	+	chr1_1:65981366-65981385	None:intergenic	25.0%
!!!	ATGGTGAGAATATTTTTACA+TGG	-	chr1_1:65981368-65981387	Msa0037070:intron	25.0%
!!!	GAGAATATTTTTACATGGAT+TGG	-	chr1_1:65981373-65981392	Msa0037070:intron	25.0%
!	TTATAAGATAAACCCTCATA+AGG	+	chr1_1:65981424-65981443	None:intergenic	25.0%
!!!	GGTTTTAATCTTTGTAGATT+TGG	-	chr1_1:65982215-65982234	Msa0037070:five_prime_UTR	25.0%
	AACAACAATCTCAACCTATA+AGG	-	chr1_1:65980202-65980221	Msa0037070:CDS	30.0%
	TATCTATGAGTCATGTTAAC+CGG	-	chr1_1:65980253-65980272	Msa0037070:intron	30.0%
!!	CGAACTTGTTTTTCCTTTTT+CGG	-	chr1_1:65980309-65980328	Msa0037070:intron	30.0%
	AATGAAGTTGTTACCGAAAA+AGG	+	chr1_1:65980325-65980344	None:intergenic	30.0%
!!!	TTTTAGAATTTCGCTGAAAG+TGG	+	chr1_1:65980433-65980452	None:intergenic	30.0%
!!	AGGCCTTATTGTCAAATTTA+TGG	-	chr1_1:65981030-65981049	Msa0037070:CDS	30.0%
	GTAAAAATATTCTCACCATC+AGG	+	chr1_1:65981367-65981386	None:intergenic	30.0%
	TCTAATTCATGAATACCTGA+AGG	+	chr1_1:65981558-65981577	None:intergenic	30.0%
	TTAAACTATTATCCGTGTGT+CGG	+	chr1_1:65981644-65981663	None:intergenic	30.0%
	TTCCTACTTTGTGATTGTAT+AGG	-	chr1_1:65981804-65981823	Msa0037070:CDS	30.0%
	TCTGTCTATACAAAGTCTAT+TGG	-	chr1_1:65981864-65981883	Msa0037070:CDS	30.0%
	TCTATACAAAGTCTATTGGA+AGG	-	chr1_1:65981868-65981887	Msa0037070:CDS	30.0%
	TAGAAAATAACTGATCAGAC+AGG	+	chr1_1:65981939-65981958	None:intergenic	30.0%
	GAGCAATAACAACAAATAGT+TGG	+	chr1_1:65982091-65982110	None:intergenic	30.0%
	TTTCAATGACTCTATTCCTT+AGG	-	chr1_1:65982144-65982163	Msa0037070:five_prime_UTR	30.0%
	TTCAATGACTCTATTCCTTA+GGG	-	chr1_1:65982145-65982164	Msa0037070:five_prime_UTR	30.0%
	AACAACAATCTCAACCTATA+AGG	-	chr1_1:65980202-65980221	Msa0037070:CDS	30.0%
	TATCTATGAGTCATGTTAAC+CGG	-	chr1_1:65980253-65980272	Msa0037070:intron	30.0%
!!	CGAACTTGTTTTTCCTTTTT+CGG	-	chr1_1:65980309-65980328	Msa0037070:intron	30.0%
	AATGAAGTTGTTACCGAAAA+AGG	+	chr1_1:65980325-65980344	None:intergenic	30.0%
!!!	TTTTAGAATTTCGCTGAAAG+TGG	+	chr1_1:65980433-65980452	None:intergenic	30.0%
!!	AGGCCTTATTGTCAAATTTA+TGG	-	chr1_1:65981030-65981049	Msa0037070:CDS	30.0%
	GTAAAAATATTCTCACCATC+AGG	+	chr1_1:65981367-65981386	None:intergenic	30.0%
	TCTAATTCATGAATACCTGA+AGG	+	chr1_1:65981558-65981577	None:intergenic	30.0%
	TTAAACTATTATCCGTGTGT+CGG	+	chr1_1:65981644-65981663	None:intergenic	30.0%
	TTCCTACTTTGTGATTGTAT+AGG	-	chr1_1:65981804-65981823	Msa0037070:CDS	30.0%
	TCTGTCTATACAAAGTCTAT+TGG	-	chr1_1:65981864-65981883	Msa0037070:CDS	30.0%
	TCTATACAAAGTCTATTGGA+AGG	-	chr1_1:65981868-65981887	Msa0037070:CDS	30.0%
	TAGAAAATAACTGATCAGAC+AGG	+	chr1_1:65981939-65981958	None:intergenic	30.0%
	GAGCAATAACAACAAATAGT+TGG	+	chr1_1:65982091-65982110	None:intergenic	30.0%
	TTTCAATGACTCTATTCCTT+AGG	-	chr1_1:65982144-65982163	Msa0037070:five_prime_UTR	30.0%
	TTCAATGACTCTATTCCTTA+GGG	-	chr1_1:65982145-65982164	Msa0037070:five_prime_UTR	30.0%
	AACCTATAAGGACTTCCATT+GGG	-	chr1_1:65980214-65980233	Msa0037070:CDS	35.0%
!!	TCAGTTATTTCTTTCCCCAA+TGG	+	chr1_1:65980232-65980251	None:intergenic	35.0%
!	TTCAACAGGGGAATTTTCTT+CGG	+	chr1_1:65980584-65980603	None:intergenic	35.0%
	AGAAAATTCCCCTGTTGAAT+CGG	-	chr1_1:65980585-65980604	Msa0037070:CDS	35.0%
	TTAGAAATATTTAAGGGGGG+AGG	+	chr1_1:65980701-65980720	None:intergenic	35.0%
	CAGACTACAGAAGGAATTAA+TGG	-	chr1_1:65980953-65980972	Msa0037070:CDS	35.0%
!	AGTAAAGTACTAAGTATGCG+TGG	+	chr1_1:65981150-65981169	None:intergenic	35.0%
	TTCATTCGTTCTCACAAAGA+CGG	-	chr1_1:65981270-65981289	Msa0037070:intron	35.0%
!!!	TTACTTTTTGTGCAGATGAG+TGG	-	chr1_1:65981316-65981335	Msa0037070:intron	35.0%
	TGGTTTAAAAGGATAGTTCG+GGG	+	chr1_1:65981464-65981483	None:intergenic	35.0%
	GTGGTTTAAAAGGATAGTTC+GGG	+	chr1_1:65981465-65981484	None:intergenic	35.0%
	GGTGGTTTAAAAGGATAGTT+CGG	+	chr1_1:65981466-65981485	None:intergenic	35.0%
!!	GGTAATGGAAAAAAGAAGCA+CGG	+	chr1_1:65981702-65981721	None:intergenic	35.0%
	GTCCTATACAATCACAAAGT+AGG	+	chr1_1:65981809-65981828	None:intergenic	35.0%
	TTGTGATTGTATAGGACAAG+TGG	-	chr1_1:65981812-65981831	Msa0037070:CDS	35.0%
!	TTTGGAATGATAAGGAAGGT+TGG	-	chr1_1:65982008-65982027	Msa0037070:five_prime_UTR	35.0%
!!!	ATGCAAGTTTTAGAACCCTA+AGG	+	chr1_1:65982163-65982182	None:intergenic	35.0%
	TCATGCAGATTTCAAGAGAA+TGG	-	chr1_1:65982277-65982296	Msa0037070:five_prime_UTR	35.0%
	AACCTATAAGGACTTCCATT+GGG	-	chr1_1:65980214-65980233	Msa0037070:CDS	35.0%
!!	TCAGTTATTTCTTTCCCCAA+TGG	+	chr1_1:65980232-65980251	None:intergenic	35.0%
!	TTCAACAGGGGAATTTTCTT+CGG	+	chr1_1:65980584-65980603	None:intergenic	35.0%
	AGAAAATTCCCCTGTTGAAT+CGG	-	chr1_1:65980585-65980604	Msa0037070:CDS	35.0%
	TTAGAAATATTTAAGGGGGG+AGG	+	chr1_1:65980701-65980720	None:intergenic	35.0%
	CAGACTACAGAAGGAATTAA+TGG	-	chr1_1:65980953-65980972	Msa0037070:CDS	35.0%
!	AGTAAAGTACTAAGTATGCG+TGG	+	chr1_1:65981150-65981169	None:intergenic	35.0%
	TTCATTCGTTCTCACAAAGA+CGG	-	chr1_1:65981270-65981289	Msa0037070:intron	35.0%
!!!	TTACTTTTTGTGCAGATGAG+TGG	-	chr1_1:65981316-65981335	Msa0037070:intron	35.0%
	TGGTTTAAAAGGATAGTTCG+GGG	+	chr1_1:65981464-65981483	None:intergenic	35.0%
	GTGGTTTAAAAGGATAGTTC+GGG	+	chr1_1:65981465-65981484	None:intergenic	35.0%
	GGTGGTTTAAAAGGATAGTT+CGG	+	chr1_1:65981466-65981485	None:intergenic	35.0%
!!	GGTAATGGAAAAAAGAAGCA+CGG	+	chr1_1:65981702-65981721	None:intergenic	35.0%
	GTCCTATACAATCACAAAGT+AGG	+	chr1_1:65981809-65981828	None:intergenic	35.0%
	TTGTGATTGTATAGGACAAG+TGG	-	chr1_1:65981812-65981831	Msa0037070:CDS	35.0%
!	TTTGGAATGATAAGGAAGGT+TGG	-	chr1_1:65982008-65982027	Msa0037070:five_prime_UTR	35.0%
!!!	ATGCAAGTTTTAGAACCCTA+AGG	+	chr1_1:65982163-65982182	None:intergenic	35.0%
	TCATGCAGATTTCAAGAGAA+TGG	-	chr1_1:65982277-65982296	Msa0037070:five_prime_UTR	35.0%
	GACTAAAACAACTTTGGGTG+CGG	-	chr1_1:65980142-65980161	Msa0037070:CDS	40.0%
	CAACCTATAAGGACTTCCAT+TGG	-	chr1_1:65980213-65980232	Msa0037070:CDS	40.0%
	ACCTATAAGGACTTCCATTG+GGG	-	chr1_1:65980215-65980234	Msa0037070:CDS	40.0%
	TTGTATCCTTAACCAGTGTC+CGG	-	chr1_1:65980348-65980367	Msa0037070:intron	40.0%
	AGAATTTCGCTGAAAGTGGT+AGG	+	chr1_1:65980429-65980448	None:intergenic	40.0%
	TCTGAGCCGTTGATCTAATT+AGG	-	chr1_1:65980515-65980534	Msa0037070:intron	40.0%
	ACACAACTTCCGTTTCTCAA+AGG	-	chr1_1:65980668-65980687	Msa0037070:intron	40.0%
!	GGAGATGAACCTTTGAGAAA+CGG	+	chr1_1:65980680-65980699	None:intergenic	40.0%
	GAAGGAATTAATGGCTCTCA+TGG	-	chr1_1:65980962-65980981	Msa0037070:CDS	40.0%
!	GTTTGGTAACCTATGAAGCA+CGG	-	chr1_1:65981054-65981073	Msa0037070:CDS	40.0%
	TAGTTACCCACTATGAAGCA+CGG	+	chr1_1:65981122-65981141	None:intergenic	40.0%
!	TCATCAGCATTTAGAGTGAG+TGG	+	chr1_1:65981296-65981315	None:intergenic	40.0%
!!	ACATGGATTGGCACAATTCA+AGG	-	chr1_1:65981385-65981404	Msa0037070:intron	40.0%
	TGGAAAAGGAACTCCTTATG+AGG	-	chr1_1:65981408-65981427	Msa0037070:intron	40.0%
	GGAAAAGGAACTCCTTATGA+GGG	-	chr1_1:65981409-65981428	Msa0037070:intron	40.0%
	GTTTAAAAGGATAGTTCGGG+GGG	+	chr1_1:65981462-65981481	None:intergenic	40.0%
	GGTTTAAAAGGATAGTTCGG+GGG	+	chr1_1:65981463-65981482	None:intergenic	40.0%
	TTCACTTGGGGTGGTTTAAA+AGG	+	chr1_1:65981475-65981494	None:intergenic	40.0%
	GTCGTCTCAAATTTCACTTG+GGG	+	chr1_1:65981487-65981506	None:intergenic	40.0%
	CGTCGTCTCAAATTTCACTT+GGG	+	chr1_1:65981488-65981507	None:intergenic	40.0%
	ACGTCGTCTCAAATTTCACT+TGG	+	chr1_1:65981489-65981508	None:intergenic	40.0%
	CATCCAAATGTTGACCAGTT+TGG	-	chr1_1:65981514-65981533	Msa0037070:intron	40.0%
	TTGCCAAACTGGTCAACATT+TGG	+	chr1_1:65981520-65981539	None:intergenic	40.0%
	CTAGACAAATGTTGCCAAAC+TGG	+	chr1_1:65981531-65981550	None:intergenic	40.0%
	CATTTGTCTAGACATCCTTC+AGG	-	chr1_1:65981540-65981559	Msa0037070:intron	40.0%
	ACATAATCCAGGGTAATCTG+AGG	-	chr1_1:65981671-65981690	Msa0037070:intron	40.0%
	AGCAGTAAACACACAGGTAA+TGG	+	chr1_1:65981717-65981736	None:intergenic	40.0%
	TACCTGTGTGTTTACTGCTT+TGG	-	chr1_1:65981718-65981737	Msa0037070:intron	40.0%
	ATCCAAAGCAGTAAACACAC+AGG	+	chr1_1:65981723-65981742	None:intergenic	40.0%
	CTGCAGCATAGTTGTTTAGA+GGG	+	chr1_1:65981985-65982004	None:intergenic	40.0%
	TCTGCAGCATAGTTGTTTAG+AGG	+	chr1_1:65981986-65982005	None:intergenic	40.0%
!!	TGCAGAGCTTTGGAATGATA+AGG	-	chr1_1:65982000-65982019	Msa0037070:five_prime_UTR	40.0%
!!	GAGCTTTGGAATGATAAGGA+AGG	-	chr1_1:65982004-65982023	Msa0037070:five_prime_UTR	40.0%
	CTAGTGCTCTAGTAGATTGT+AGG	-	chr1_1:65982194-65982213	Msa0037070:five_prime_UTR	40.0%
!!!	GGTCGAATGCGTATTTTAAC+TGG	-	chr1_1:65982236-65982255	Msa0037070:five_prime_UTR	40.0%
!!!	ATTTTAACTGGTGCTGCTCA+TGG	-	chr1_1:65982248-65982267	Msa0037070:five_prime_UTR	40.0%
	GACTAAAACAACTTTGGGTG+CGG	-	chr1_1:65980142-65980161	Msa0037070:CDS	40.0%
	CAACCTATAAGGACTTCCAT+TGG	-	chr1_1:65980213-65980232	Msa0037070:CDS	40.0%
	ACCTATAAGGACTTCCATTG+GGG	-	chr1_1:65980215-65980234	Msa0037070:CDS	40.0%
	TTGTATCCTTAACCAGTGTC+CGG	-	chr1_1:65980348-65980367	Msa0037070:intron	40.0%
	AGAATTTCGCTGAAAGTGGT+AGG	+	chr1_1:65980429-65980448	None:intergenic	40.0%
	TCTGAGCCGTTGATCTAATT+AGG	-	chr1_1:65980515-65980534	Msa0037070:intron	40.0%
	ACACAACTTCCGTTTCTCAA+AGG	-	chr1_1:65980668-65980687	Msa0037070:intron	40.0%
!	GGAGATGAACCTTTGAGAAA+CGG	+	chr1_1:65980680-65980699	None:intergenic	40.0%
	GAAGGAATTAATGGCTCTCA+TGG	-	chr1_1:65980962-65980981	Msa0037070:CDS	40.0%
!	GTTTGGTAACCTATGAAGCA+CGG	-	chr1_1:65981054-65981073	Msa0037070:CDS	40.0%
	TAGTTACCCACTATGAAGCA+CGG	+	chr1_1:65981122-65981141	None:intergenic	40.0%
!	TCATCAGCATTTAGAGTGAG+TGG	+	chr1_1:65981296-65981315	None:intergenic	40.0%
!!	ACATGGATTGGCACAATTCA+AGG	-	chr1_1:65981385-65981404	Msa0037070:intron	40.0%
	TGGAAAAGGAACTCCTTATG+AGG	-	chr1_1:65981408-65981427	Msa0037070:intron	40.0%
	GGAAAAGGAACTCCTTATGA+GGG	-	chr1_1:65981409-65981428	Msa0037070:intron	40.0%
	GTTTAAAAGGATAGTTCGGG+GGG	+	chr1_1:65981462-65981481	None:intergenic	40.0%
	GGTTTAAAAGGATAGTTCGG+GGG	+	chr1_1:65981463-65981482	None:intergenic	40.0%
	TTCACTTGGGGTGGTTTAAA+AGG	+	chr1_1:65981475-65981494	None:intergenic	40.0%
	GTCGTCTCAAATTTCACTTG+GGG	+	chr1_1:65981487-65981506	None:intergenic	40.0%
	CGTCGTCTCAAATTTCACTT+GGG	+	chr1_1:65981488-65981507	None:intergenic	40.0%
	ACGTCGTCTCAAATTTCACT+TGG	+	chr1_1:65981489-65981508	None:intergenic	40.0%
	CATCCAAATGTTGACCAGTT+TGG	-	chr1_1:65981514-65981533	Msa0037070:intron	40.0%
	TTGCCAAACTGGTCAACATT+TGG	+	chr1_1:65981520-65981539	None:intergenic	40.0%
	CTAGACAAATGTTGCCAAAC+TGG	+	chr1_1:65981531-65981550	None:intergenic	40.0%
	CATTTGTCTAGACATCCTTC+AGG	-	chr1_1:65981540-65981559	Msa0037070:intron	40.0%
	ACATAATCCAGGGTAATCTG+AGG	-	chr1_1:65981671-65981690	Msa0037070:intron	40.0%
	AGCAGTAAACACACAGGTAA+TGG	+	chr1_1:65981717-65981736	None:intergenic	40.0%
	TACCTGTGTGTTTACTGCTT+TGG	-	chr1_1:65981718-65981737	Msa0037070:intron	40.0%
	ATCCAAAGCAGTAAACACAC+AGG	+	chr1_1:65981723-65981742	None:intergenic	40.0%
	CTGCAGCATAGTTGTTTAGA+GGG	+	chr1_1:65981985-65982004	None:intergenic	40.0%
	TCTGCAGCATAGTTGTTTAG+AGG	+	chr1_1:65981986-65982005	None:intergenic	40.0%
!!	TGCAGAGCTTTGGAATGATA+AGG	-	chr1_1:65982000-65982019	Msa0037070:five_prime_UTR	40.0%
!!	GAGCTTTGGAATGATAAGGA+AGG	-	chr1_1:65982004-65982023	Msa0037070:five_prime_UTR	40.0%
	CTAGTGCTCTAGTAGATTGT+AGG	-	chr1_1:65982194-65982213	Msa0037070:five_prime_UTR	40.0%
!!!	GGTCGAATGCGTATTTTAAC+TGG	-	chr1_1:65982236-65982255	Msa0037070:five_prime_UTR	40.0%
!!!	ATTTTAACTGGTGCTGCTCA+TGG	-	chr1_1:65982248-65982267	Msa0037070:five_prime_UTR	40.0%
	TCCCCAATGGAAGTCCTTAT+AGG	+	chr1_1:65980219-65980238	None:intergenic	45.0%
	TGTATCCTTAACCAGTGCTC+CGG	+	chr1_1:65980284-65980303	None:intergenic	45.0%
	TGTATCCTTAACCAGTGTCC+GGG	-	chr1_1:65980349-65980368	Msa0037070:intron	45.0%
!	AGAAATGTTAATCGGTGCCC+CGG	+	chr1_1:65980370-65980389	None:intergenic	45.0%
	CGGAGGCCTAATTAGATCAA+CGG	+	chr1_1:65980524-65980543	None:intergenic	45.0%
	CTAATTAGGCCTCCGTTGAT+CGG	-	chr1_1:65980529-65980548	Msa0037070:intron	45.0%
	ACCTCCATGATTCCGATCAA+CGG	+	chr1_1:65980544-65980563	None:intergenic	45.0%
!	AACAGGGGAATTTTCTTCGG+CGG	+	chr1_1:65980581-65980600	None:intergenic	45.0%
	AAATTCCCCTGTTGAATCGG+CGG	-	chr1_1:65980588-65980607	Msa0037070:CDS	45.0%
	TGTCTGTATCCGTGCTTCAT+AGG	+	chr1_1:65981066-65981085	None:intergenic	45.0%
	ATGAAGCACGGATACAGACA+CGG	-	chr1_1:65981066-65981085	Msa0037070:CDS	45.0%
	TATGAAGCACGGACACTTCT+TGG	+	chr1_1:65981111-65981130	None:intergenic	45.0%
	AAGTGTCCGTGCTTCATAGT+GGG	-	chr1_1:65981113-65981132	Msa0037070:CDS	45.0%
!	CTTTTTGTGCAGATGAGTGG+AGG	-	chr1_1:65981319-65981338	Msa0037070:intron	45.0%
!!	TGGATTGGCACAATTCAAGG+TGG	-	chr1_1:65981388-65981407	Msa0037070:intron	45.0%
	GGCACAATTCAAGGTGGAAA+AGG	-	chr1_1:65981394-65981413	Msa0037070:intron	45.0%
	GTCTCAAATTTCACTTGGGG+TGG	+	chr1_1:65981484-65981503	None:intergenic	45.0%
	ACTGACACAAACACAGACAC+CGG	-	chr1_1:65981610-65981629	Msa0037070:intron	45.0%
	CTGATCAGACAGGAACACAA+AGG	+	chr1_1:65981929-65981948	None:intergenic	45.0%
	TCTAACAGCAGAGCCTAACT+TGG	-	chr1_1:65981955-65981974	Msa0037070:five_prime_UTR	45.0%
	TTTAGAGGGCTCTCCAAGTT+AGG	+	chr1_1:65981971-65981990	None:intergenic	45.0%
	ACAACTATGCTGCAGAGCTT+TGG	-	chr1_1:65981990-65982009	Msa0037070:five_prime_UTR	45.0%
	GTCCACAAGCAGTATTTAGC+TGG	-	chr1_1:65982299-65982318	Msa0037070:five_prime_UTR	45.0%
	CTCCAGCTAAATACTGCTTG+TGG	+	chr1_1:65982304-65982323	None:intergenic	45.0%
	TCCCCAATGGAAGTCCTTAT+AGG	+	chr1_1:65980219-65980238	None:intergenic	45.0%
	TGTATCCTTAACCAGTGCTC+CGG	+	chr1_1:65980284-65980303	None:intergenic	45.0%
	TGTATCCTTAACCAGTGTCC+GGG	-	chr1_1:65980349-65980368	Msa0037070:intron	45.0%
!	AGAAATGTTAATCGGTGCCC+CGG	+	chr1_1:65980370-65980389	None:intergenic	45.0%
	CGGAGGCCTAATTAGATCAA+CGG	+	chr1_1:65980524-65980543	None:intergenic	45.0%
	CTAATTAGGCCTCCGTTGAT+CGG	-	chr1_1:65980529-65980548	Msa0037070:intron	45.0%
	ACCTCCATGATTCCGATCAA+CGG	+	chr1_1:65980544-65980563	None:intergenic	45.0%
!	AACAGGGGAATTTTCTTCGG+CGG	+	chr1_1:65980581-65980600	None:intergenic	45.0%
	AAATTCCCCTGTTGAATCGG+CGG	-	chr1_1:65980588-65980607	Msa0037070:CDS	45.0%
	TGTCTGTATCCGTGCTTCAT+AGG	+	chr1_1:65981066-65981085	None:intergenic	45.0%
	ATGAAGCACGGATACAGACA+CGG	-	chr1_1:65981066-65981085	Msa0037070:CDS	45.0%
	TATGAAGCACGGACACTTCT+TGG	+	chr1_1:65981111-65981130	None:intergenic	45.0%
	AAGTGTCCGTGCTTCATAGT+GGG	-	chr1_1:65981113-65981132	Msa0037070:CDS	45.0%
!	CTTTTTGTGCAGATGAGTGG+AGG	-	chr1_1:65981319-65981338	Msa0037070:intron	45.0%
!!	TGGATTGGCACAATTCAAGG+TGG	-	chr1_1:65981388-65981407	Msa0037070:intron	45.0%
	GGCACAATTCAAGGTGGAAA+AGG	-	chr1_1:65981394-65981413	Msa0037070:intron	45.0%
	GTCTCAAATTTCACTTGGGG+TGG	+	chr1_1:65981484-65981503	None:intergenic	45.0%
	ACTGACACAAACACAGACAC+CGG	-	chr1_1:65981610-65981629	Msa0037070:intron	45.0%
	CTGATCAGACAGGAACACAA+AGG	+	chr1_1:65981929-65981948	None:intergenic	45.0%
	TCTAACAGCAGAGCCTAACT+TGG	-	chr1_1:65981955-65981974	Msa0037070:five_prime_UTR	45.0%
	TTTAGAGGGCTCTCCAAGTT+AGG	+	chr1_1:65981971-65981990	None:intergenic	45.0%
	ACAACTATGCTGCAGAGCTT+TGG	-	chr1_1:65981990-65982009	Msa0037070:five_prime_UTR	45.0%
	GTCCACAAGCAGTATTTAGC+TGG	-	chr1_1:65982299-65982318	Msa0037070:five_prime_UTR	45.0%
	CTCCAGCTAAATACTGCTTG+TGG	+	chr1_1:65982304-65982323	None:intergenic	45.0%
	AACTTTGGGTGCGGAACACT+TGG	-	chr1_1:65980151-65980170	Msa0037070:CDS	50.0%
	GTCATGTTAACCGGTGTCTC+CGG	-	chr1_1:65980262-65980281	Msa0037070:intron	50.0%
	GTATCCTTAACCAGTGTCCG+GGG	-	chr1_1:65980350-65980369	Msa0037070:intron	50.0%
	TCCATGATTCCGATCAACGG+AGG	+	chr1_1:65980541-65980560	None:intergenic	50.0%
	TCCGTTGATCGGAATCATGG+AGG	-	chr1_1:65980540-65980559	Msa0037070:intron	50.0%
	GCTTCTTGGAGGATGATCGA+CGG	+	chr1_1:65980624-65980643	None:intergenic	50.0%
	GAAGTTGTGTCAGCAGGAAG+AGG	+	chr1_1:65980658-65980677	None:intergenic	50.0%
	GAAACGGAAGTTGTGTCAGC+AGG	+	chr1_1:65980664-65980683	None:intergenic	50.0%
	GTGCAACTGCAGACTACAGA+AGG	-	chr1_1:65980944-65980963	Msa0037070:CDS	50.0%
	TTCTTGGTTTAGGCGTGTCC+TGG	+	chr1_1:65981095-65981114	None:intergenic	50.0%
	GCACGGACACTTCTTGGTTT+AGG	+	chr1_1:65981105-65981124	None:intergenic	50.0%
!	GAAGTGTCCGTGCTTCATAG+TGG	-	chr1_1:65981112-65981131	Msa0037070:CDS	50.0%
	CAGATGAGTGGAGGAGATCT+TGG	-	chr1_1:65981328-65981347	Msa0037070:intron	50.0%
!	GGAGTATCTGCTTTCCCTGA+TGG	-	chr1_1:65981349-65981368	Msa0037070:intron	50.0%
	ATAGTTCGGGGGGAAACGTA+AGG	+	chr1_1:65981452-65981471	None:intergenic	50.0%
	AACTTTGGGTGCGGAACACT+TGG	-	chr1_1:65980151-65980170	Msa0037070:CDS	50.0%
	GTCATGTTAACCGGTGTCTC+CGG	-	chr1_1:65980262-65980281	Msa0037070:intron	50.0%
	GTATCCTTAACCAGTGTCCG+GGG	-	chr1_1:65980350-65980369	Msa0037070:intron	50.0%
	TCCATGATTCCGATCAACGG+AGG	+	chr1_1:65980541-65980560	None:intergenic	50.0%
	TCCGTTGATCGGAATCATGG+AGG	-	chr1_1:65980540-65980559	Msa0037070:intron	50.0%
	GCTTCTTGGAGGATGATCGA+CGG	+	chr1_1:65980624-65980643	None:intergenic	50.0%
	GAAGTTGTGTCAGCAGGAAG+AGG	+	chr1_1:65980658-65980677	None:intergenic	50.0%
	GAAACGGAAGTTGTGTCAGC+AGG	+	chr1_1:65980664-65980683	None:intergenic	50.0%
	GTGCAACTGCAGACTACAGA+AGG	-	chr1_1:65980944-65980963	Msa0037070:CDS	50.0%
	TTCTTGGTTTAGGCGTGTCC+TGG	+	chr1_1:65981095-65981114	None:intergenic	50.0%
	GCACGGACACTTCTTGGTTT+AGG	+	chr1_1:65981105-65981124	None:intergenic	50.0%
!	GAAGTGTCCGTGCTTCATAG+TGG	-	chr1_1:65981112-65981131	Msa0037070:CDS	50.0%
	CAGATGAGTGGAGGAGATCT+TGG	-	chr1_1:65981328-65981347	Msa0037070:intron	50.0%
!	GGAGTATCTGCTTTCCCTGA+TGG	-	chr1_1:65981349-65981368	Msa0037070:intron	50.0%
	ATAGTTCGGGGGGAAACGTA+AGG	+	chr1_1:65981452-65981471	None:intergenic	50.0%
!!	TGTCTCCGGAGCACTGGTTA+AGG	-	chr1_1:65980276-65980295	Msa0037070:intron	55.0%
	GCCTCCGTTGATCGGAATCA+TGG	-	chr1_1:65980537-65980556	Msa0037070:intron	55.0%
	CTTCGGCGGTGGTGTTTGAT+CGG	+	chr1_1:65980567-65980586	None:intergenic	55.0%
!	AGGGGAATTTTCTTCGGCGG+TGG	+	chr1_1:65980578-65980597	None:intergenic	55.0%
!!	ACTGACCGCCGATTCAACAG+GGG	+	chr1_1:65980596-65980615	None:intergenic	55.0%
!!	GACTGACCGCCGATTCAACA+GGG	+	chr1_1:65980597-65980616	None:intergenic	55.0%
	TCTTGGAGGATGATCGACGG+TGG	+	chr1_1:65980621-65980640	None:intergenic	55.0%
	AGAAGCGAGTGGCTTCTTGG+AGG	+	chr1_1:65980635-65980654	None:intergenic	55.0%
	AGGAGAAGCGAGTGGCTTCT+TGG	+	chr1_1:65980638-65980657	None:intergenic	55.0%
	GGACACTCCTCAGATTACCC+TGG	+	chr1_1:65981681-65981700	None:intergenic	55.0%
!!	TGTCTCCGGAGCACTGGTTA+AGG	-	chr1_1:65980276-65980295	Msa0037070:intron	55.0%
	GCCTCCGTTGATCGGAATCA+TGG	-	chr1_1:65980537-65980556	Msa0037070:intron	55.0%
	CTTCGGCGGTGGTGTTTGAT+CGG	+	chr1_1:65980567-65980586	None:intergenic	55.0%
!	AGGGGAATTTTCTTCGGCGG+TGG	+	chr1_1:65980578-65980597	None:intergenic	55.0%
!!	ACTGACCGCCGATTCAACAG+GGG	+	chr1_1:65980596-65980615	None:intergenic	55.0%
!!	GACTGACCGCCGATTCAACA+GGG	+	chr1_1:65980597-65980616	None:intergenic	55.0%
	TCTTGGAGGATGATCGACGG+TGG	+	chr1_1:65980621-65980640	None:intergenic	55.0%
	AGAAGCGAGTGGCTTCTTGG+AGG	+	chr1_1:65980635-65980654	None:intergenic	55.0%
	AGGAGAAGCGAGTGGCTTCT+TGG	+	chr1_1:65980638-65980657	None:intergenic	55.0%
	GGACACTCCTCAGATTACCC+TGG	+	chr1_1:65981681-65981700	None:intergenic	55.0%
	AACCAGTGCTCCGGAGACAC+CGG	+	chr1_1:65980275-65980294	None:intergenic	60.0%
!	TTAATCGGTGCCCCGGACAC+TGG	+	chr1_1:65980363-65980382	None:intergenic	60.0%
!!	CGACTGACCGCCGATTCAAC+AGG	+	chr1_1:65980598-65980617	None:intergenic	60.0%
	GCAGGAAGAGGAGAAGCGAG+TGG	+	chr1_1:65980646-65980665	None:intergenic	60.0%
	CGGATACAGACACGGACACC+AGG	-	chr1_1:65981074-65981093	Msa0037070:CDS	60.0%
!!	CCGTGTGTCGGTGTTGTGTC+CGG	+	chr1_1:65981632-65981651	None:intergenic	60.0%
	CCGGACACAACACCGACACA+CGG	-	chr1_1:65981629-65981648	Msa0037070:intron	60.0%
	AACCAGTGCTCCGGAGACAC+CGG	+	chr1_1:65980275-65980294	None:intergenic	60.0%
!	TTAATCGGTGCCCCGGACAC+TGG	+	chr1_1:65980363-65980382	None:intergenic	60.0%
!!	CGACTGACCGCCGATTCAAC+AGG	+	chr1_1:65980598-65980617	None:intergenic	60.0%
	GCAGGAAGAGGAGAAGCGAG+TGG	+	chr1_1:65980646-65980665	None:intergenic	60.0%
	CGGATACAGACACGGACACC+AGG	-	chr1_1:65981074-65981093	Msa0037070:CDS	60.0%
!!	CCGTGTGTCGGTGTTGTGTC+CGG	+	chr1_1:65981632-65981651	None:intergenic	60.0%
	CCGGACACAACACCGACACA+CGG	-	chr1_1:65981629-65981648	Msa0037070:intron	60.0%
	AACCGGTGTCTCCGGAGCAC+TGG	-	chr1_1:65980270-65980289	Msa0037070:intron	65.0%
!	GGTGCCCCGGACACTGGTTA+AGG	+	chr1_1:65980357-65980376	None:intergenic	65.0%
	AACCGGTGTCTCCGGAGCAC+TGG	-	chr1_1:65980270-65980289	Msa0037070:intron	65.0%
!	GGTGCCCCGGACACTGGTTA+AGG	+	chr1_1:65980357-65980376	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_1	gene	65980118	65982346	65980118	ID=Msa0037070;Name=Msa0037070
chr1_1	mRNA	65980118	65982346	65980118	ID=Msa0037070-mRNA-1;Parent=Msa0037070;Name=Msa0037070-mRNA-1;_AED=0.23;_eAED=0.24;_QI=438\|0.6\|0.66\|1\|1\|1\|6\|0\|216
chr1_1	exon	65980118	65980248	65980118	ID=Msa0037070-mRNA-1:exon:21287;Parent=Msa0037070-mRNA-1
chr1_1	exon	65980439	65980501	65980439	ID=Msa0037070-mRNA-1:exon:21286;Parent=Msa0037070-mRNA-1
chr1_1	exon	65980575	65980638	65980575	ID=Msa0037070-mRNA-1:exon:21285;Parent=Msa0037070-mRNA-1
chr1_1	exon	65980903	65981133	65980903	ID=Msa0037070-mRNA-1:exon:21284;Parent=Msa0037070-mRNA-1
chr1_1	exon	65981481	65981508	65981481	ID=Msa0037070-mRNA-1:exon:21283;Parent=Msa0037070-mRNA-1
chr1_1	exon	65981775	65982346	65981775	ID=Msa0037070-mRNA-1:exon:21282;Parent=Msa0037070-mRNA-1
chr1_1	five_prime_UTR	65981909	65982346	65981909	ID=Msa0037070-mRNA-1:five_prime_utr;Parent=Msa0037070-mRNA-1
chr1_1	CDS	65981775	65981908	65981775	ID=Msa0037070-mRNA-1:cds;Parent=Msa0037070-mRNA-1
chr1_1	CDS	65981481	65981508	65981481	ID=Msa0037070-mRNA-1:cds;Parent=Msa0037070-mRNA-1
chr1_1	CDS	65980903	65981133	65980903	ID=Msa0037070-mRNA-1:cds;Parent=Msa0037070-mRNA-1
chr1_1	CDS	65980575	65980638	65980575	ID=Msa0037070-mRNA-1:cds;Parent=Msa0037070-mRNA-1
chr1_1	CDS	65980439	65980501	65980439	ID=Msa0037070-mRNA-1:cds;Parent=Msa0037070-mRNA-1
chr1_1	CDS	65980118	65980248	65980118	ID=Msa0037070-mRNA-1:cds;Parent=Msa0037070-mRNA-1

Gene Sequence

>Msa0037070

ATGGAGGTCCGATCAAACACCACCGCCGAAGAAAATTCCCCTGTTGAATCGGCGGTCAGTCGCCACCGTCGATCATCCTCCAAGAAGCCACTCGCTTCTCCTCTTCCTGCTGACACAACTTCCGTTTCTCAAAGACTACAGAAGGAATTAATGGCTCTCATGATGAGTGGAGGAGATCTTGGAGTATCTGCTTTCCCTGATGGTGAGAATATTTTTACATGGATTGGCACAATTCAAGGTGGAAAAGGAACTCCTTATGAGGGTTTATCTTATAAACTTTCCTTACGTTTCCCCCCGAACTATCCTTTTAAACCACCCCAAGTGAAATTTGAGACGACGTGCTTTCATCCAAATGTTGACCAGTTTGGCAACATTTGTCTAGACATCCTTCAGGACAAGTGGTCTTCAGCTTATGACTGTAGAACTATGCTTCTGTCTATACAAAGTCTATTGGAAGCAGAGCCTAACTTGGAGAGCCCTCTAAACAACTATGCTGCAGAGCTTTGGAATGATAAGGAAGGTTTTAATCTTTGTAGATTTGGTCGAATGCGTATTTTAACTGGTGCTGCTCATGGAATATATCATGCAGATTTCAAGAGAATGGTCCACAAGCAGTATTTAGCTGGAGAAGCACCTGCACCTGAAAGTTGA

Protein sequence

>Msa0037070

MEVRSNTTAEENSPVESAVSRHRRSSSKKPLASPLPADTTSVSQRLQKELMALMMSGGDLGVSAFPDGENIFTWIGTIQGGKGTPYEGLSYKLSLRFPPNYPFKPPQVKFETTCFHPNVDQFGNICLDILQDKWSSAYDCRTMLLSIQSLLEAEPNLESPLNNYAAELWNDKEGFNLCRFGRMRILTGAAHGIYHADFKRMVHKQYLAGEAPAPES*