AlfalfaGEDB | Msa0177200

M. sativa cultivar zhongmu-4 / Msa0177200

KEGG: K06688
GO: GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007088 GO:0007346 GO:0008150 GO:0008152 GO:0008283 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0010564 GO:0010965 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0030071 GO:0030163 GO:0031145 GO:0031625 GO:0032446 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0036211 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051128 GO:0051603 GO:0051726 GO:0051783 GO:0051983 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901990 GO:1902099 GO:1905818
PFAM: PF00179.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0177200	sp\|Q54XS6\|UBE2C_DICDI	56.250	128	43	1	42	156	19	146	9.28e-49	157

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0177200	G7I9J7	84.375	192	4	2	1	166	1	192	3.10e-110	321

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0037070	Msa0177200	0.851117	1.093503e-60	-8.615850e-47
Msa0069200	Msa0177200	0.903081	5.012693e-79	-8.615850e-47
Msa0131260	Msa0177200	0.820189	7.824200e-53	-8.615850e-47
Msa0177200	Msa0298950	-0.804206	2.414319e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0177200	MtrunA17_Chr1g0199951	84.375	192	4	2	1	166	1	192	5.96e-114	321
Msa0177200	MtrunA17_Chr4g0038891	53.086	162	51	2	27	163	18	179	3.14e-52	164
Msa0177200	MtrunA17_Chr5g0396451	49.701	167	59	2	15	156	6	172	1.23e-50	160
Msa0177200	MtrunA17_Chr4g0060351	39.669	121	59	2	48	154	23	143	1.51e-22	87.8
Msa0177200	MtrunA17_Chr8g0362321	38.843	121	60	2	48	154	23	143	3.34e-22	87.0
Msa0177200	MtrunA17_Chr1g0154011	39.316	117	57	2	47	149	19	135	8.93e-22	85.9
Msa0177200	MtrunA17_Chr3g0108261	40.741	108	51	1	49	143	21	128	4.51e-21	84.0
Msa0177200	MtrunA17_Chr5g0432831	40.741	108	51	1	49	143	21	128	4.76e-21	84.0
Msa0177200	MtrunA17_Chr4g0037011	41.905	105	48	1	50	141	22	126	5.41e-21	84.0
Msa0177200	MtrunA17_Chr7g0275361	39.815	108	52	1	49	143	21	128	1.67e-20	82.4
Msa0177200	MtrunA17_Chr2g0316201	40.179	112	54	1	48	146	24	135	1.11e-19	80.5
Msa0177200	MtrunA17_Chr2g0316211	39.286	112	55	1	48	146	24	135	3.24e-19	79.3
Msa0177200	MtrunA17_Chr8g0378601	43.011	93	40	1	50	129	43	135	5.14e-19	79.3
Msa0177200	MtrunA17_Chr8g0369311	37.391	115	58	2	49	149	77	191	1.00e-18	79.3
Msa0177200	MtrunA17_Chr3g0131871	32.500	120	65	2	48	153	22	139	7.47e-18	76.6
Msa0177200	MtrunA17_Chr2g0328001	35.156	128	56	2	54	154	30	157	3.78e-17	74.3
Msa0177200	MtrunA17_Chr4g0031181	33.594	128	58	2	54	154	30	157	5.97e-17	73.6
Msa0177200	MtrunA17_Chr3g0139901	32.432	111	61	1	45	141	21	131	1.37e-15	70.1
Msa0177200	MtrunA17_Chr5g0401831	34.167	120	62	3	53	155	32	151	1.70e-14	67.0
Msa0177200	MtrunA17_Chr4g0053191	33.913	115	60	2	57	155	37	151	8.31e-14	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0177200	AT3G20060.2	58.594	128	40	1	42	156	4	131	1.58e-49	156
Msa0177200	AT3G20060.1	58.594	128	40	1	42	156	49	176	2.02e-49	157
Msa0177200	AT1G50490.1	58.678	121	37	1	49	156	55	175	8.57e-47	150
Msa0177200	AT1G14400.1	40.000	120	58	2	48	153	23	142	1.33e-22	88.6
Msa0177200	AT1G14400.2	40.000	120	58	2	48	153	23	142	1.33e-22	88.6
Msa0177200	AT2G02760.1	39.669	121	59	2	48	154	23	143	1.61e-22	88.2
Msa0177200	AT2G02760.2	39.669	121	59	2	48	154	23	143	1.61e-22	88.2
Msa0177200	AT2G02760.4	39.669	121	59	2	48	154	23	143	1.61e-22	88.2
Msa0177200	AT2G02760.3	39.669	121	59	2	48	154	23	143	1.61e-22	88.2
Msa0177200	AT2G16740.1	40.336	119	57	2	47	151	19	137	1.76e-22	87.8
Msa0177200	AT5G62540.1	40.000	120	58	2	47	152	22	141	1.55e-21	85.5
Msa0177200	AT4G27960.1	37.500	128	63	2	49	159	21	148	5.78e-21	84.0
Msa0177200	AT1G64230.2	39.815	108	52	1	49	143	21	128	1.24e-20	83.2
Msa0177200	AT1G64230.1	39.815	108	52	1	49	143	21	128	1.24e-20	83.2
Msa0177200	AT5G53300.2	37.500	128	63	2	49	159	21	148	1.45e-20	83.2
Msa0177200	AT5G53300.4	37.500	128	63	2	49	159	21	148	1.45e-20	83.2
Msa0177200	AT5G53300.1	37.500	128	63	2	49	159	21	148	1.45e-20	83.2
Msa0177200	AT5G56150.1	37.615	109	55	1	47	142	19	127	2.14e-20	82.4
Msa0177200	AT5G41700.5	39.815	108	52	1	49	143	21	128	2.40e-20	82.4
Msa0177200	AT5G41700.2	39.815	108	52	1	49	143	21	128	2.40e-20	82.4
Msa0177200	AT5G41700.1	39.815	108	52	1	49	143	21	128	2.40e-20	82.4
Msa0177200	AT3G08690.2	40.187	107	51	1	49	142	21	127	4.77e-20	81.6
Msa0177200	AT3G08690.1	40.187	107	51	1	49	142	21	127	4.77e-20	81.6
Msa0177200	AT1G16890.2	41.071	112	53	1	48	146	24	135	5.16e-20	81.6
Msa0177200	AT4G27960.2	37.795	127	62	2	50	159	52	178	6.13e-20	82.0
Msa0177200	AT5G41700.4	38.889	108	53	1	49	143	22	129	6.25e-20	81.3
Msa0177200	AT1G16890.3	41.071	112	53	1	48	146	33	144	9.08e-20	81.3
Msa0177200	AT1G64230.3	39.423	104	50	1	53	143	34	137	9.18e-20	81.3
Msa0177200	AT1G78870.2	40.179	112	54	1	48	146	24	135	1.64e-19	80.5
Msa0177200	AT1G64230.5	39.252	107	52	1	49	142	63	169	1.78e-19	81.3
Msa0177200	AT1G64230.4	39.252	107	52	1	49	142	63	169	1.78e-19	81.3
Msa0177200	AT5G50870.1	35.780	109	56	1	48	142	22	130	4.21e-18	77.8
Msa0177200	AT5G50870.2	36.449	107	54	1	48	140	22	128	5.49e-18	77.8
Msa0177200	AT3G13550.1	38.739	111	54	2	50	146	57	167	1.18e-17	76.3
Msa0177200	AT3G08700.2	38.053	113	56	2	56	154	29	141	2.29e-17	74.7
Msa0177200	AT3G08700.1	38.053	113	56	2	56	154	29	141	2.29e-17	74.7
Msa0177200	AT5G59300.1	35.156	128	56	2	54	154	30	157	5.81e-17	73.9
Msa0177200	AT1G16890.1	42.105	95	42	1	65	146	8	102	6.58e-17	72.8
Msa0177200	AT1G78870.4	42.105	95	42	1	65	146	8	102	6.72e-17	72.8
Msa0177200	AT3G13550.2	40.217	92	42	1	50	128	57	148	2.40e-16	72.8
Msa0177200	AT1G36340.2	43.617	94	40	1	54	134	32	125	3.69e-16	71.6
Msa0177200	AT1G36340.1	43.617	94	40	1	54	134	32	125	3.69e-16	71.6
Msa0177200	AT5G25760.1	35.238	105	54	1	45	135	21	125	3.69e-16	71.6
Msa0177200	AT5G25760.2	35.238	105	54	1	45	135	21	125	3.69e-16	71.6
Msa0177200	AT3G46460.1	34.375	128	57	2	54	154	30	157	5.95e-16	71.6
Msa0177200	AT1G78870.1	41.667	96	42	2	65	146	8	103	1.59e-15	69.3
Msa0177200	AT3G55380.1	31.250	128	61	2	54	154	31	158	5.62e-15	68.9
Msa0177200	AT5G41700.3	49.123	57	29	0	49	105	21	77	3.00e-14	66.6
Msa0177200	AT5G53300.3	49.123	57	29	0	49	105	21	77	5.38e-14	65.1
Msa0177200	AT5G56150.2	44.068	59	33	0	47	105	19	77	5.96e-14	64.7
Msa0177200	AT1G78870.3	38.202	89	42	1	48	123	24	112	5.58e-12	59.7
Msa0177200	AT3G57870.1	33.058	121	62	3	57	158	38	158	1.29e-11	60.1

Find 49 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCACTTGGGGTGGTTTAAA+AGG	0.191154	1_4:+64087565	None:intergenic
AATTGTATAAATCAACTTTC+AGG	0.222701	1_4:+64086701	None:intergenic
GAAAATAATTGCTATTGCTT+TGG	0.294262	1_4:+64086678	None:intergenic
AGGAGAAGCGAGTGGCTTCT+TGG	0.342515	1_4:+64088402	None:intergenic
TTTAGAGGGCTCTCCAAGTT+AGG	0.344635	1_4:+64087069	None:intergenic
TCTGCAGCATAGTTGTTTAG+AGG	0.381020	1_4:+64087054	None:intergenic
AGAAAATTCCCCTGTTGAAT+CGG	0.394486	1_4:-64088452	Msa0177200:CDS
GGTGGTTTAAAAGGATAGTT+CGG	0.395297	1_4:+64087574	None:intergenic
CGACTGACCGCCGATTCAAC+AGG	0.398059	1_4:+64088442	None:intergenic
ACAACTATGCTGCAGAGCTT+TGG	0.406851	1_4:-64087047	Msa0177200:CDS
ACATGGATTGGCACAATTCA+AGG	0.410583	1_4:-64087652	Msa0177200:CDS
GTGGTTTAAAAGGATAGTTC+GGG	0.414728	1_4:+64087575	None:intergenic
TCTGTCTATACAAAGTCTAT+TGG	0.417973	1_4:-64087173	Msa0177200:CDS
CTTCGGCGGTGGTGTTTGAT+CGG	0.437236	1_4:+64088473	None:intergenic
CAGATGAGTGGAGGAGATCT+TGG	0.446524	1_4:-64087709	Msa0177200:CDS
GGCACAATTCAAGGTGGAAA+AGG	0.458217	1_4:-64087643	Msa0177200:CDS
TCTAACAGCAGAGCCTAACT+TGG	0.460379	1_4:-64087082	Msa0177200:intron
TGGAAAAGGAACTCCTTATG+AGG	0.468163	1_4:-64087629	Msa0177200:CDS
GGAGTATCTGCTTTCCCTGA+TGG	0.470606	1_4:-64087688	Msa0177200:CDS
TGATGTTAGCTTCATAATCA+TGG	0.486410	1_4:+64086474	None:intergenic
GTCCACAAGCAGTATTTAGC+TGG	0.486859	1_4:-64086737	Msa0177200:CDS
ATAAATCAACTTTCAGGTGC+AGG	0.493849	1_4:+64086707	None:intergenic
TTATAAGATAAACCCTCATA+AGG	0.500118	1_4:+64087616	None:intergenic
TCATGCAGATTTCAAGAGAA+TGG	0.510290	1_4:-64086759	Msa0177200:intron
GTCTCAAATTTCACTTGGGG+TGG	0.517777	1_4:+64087556	None:intergenic
TGCAGAGCTTTGGAATGATA+AGG	0.522423	1_4:-64087037	Msa0177200:CDS
GAAACGGAAGTTGTGTCAGC+AGG	0.527352	1_4:+64088376	None:intergenic
GAAGTTGTGTCAGCAGGAAG+AGG	0.534120	1_4:+64088382	None:intergenic
CGTCGTCTCAAATTTCACTT+GGG	0.535928	1_4:+64087552	None:intergenic
ACGTCGTCTCAAATTTCACT+TGG	0.545034	1_4:+64087551	None:intergenic
CTGCAGCATAGTTGTTTAGA+GGG	0.556199	1_4:+64087055	None:intergenic
TGGTTTAAAAGGATAGTTCG+GGG	0.571786	1_4:+64087576	None:intergenic
CTCCAGCTAAATACTGCTTG+TGG	0.577463	1_4:+64086735	None:intergenic
TTGTGATTGTATAGGACAAG+TGG	0.591402	1_4:-64087225	Msa0177200:intron
GGAAAAGGAACTCCTTATGA+GGG	0.594287	1_4:-64087628	Msa0177200:CDS
GGTTTAAAAGGATAGTTCGG+GGG	0.602685	1_4:+64087577	None:intergenic
AGAAGCGAGTGGCTTCTTGG+AGG	0.606644	1_4:+64088405	None:intergenic
TCTATACAAAGTCTATTGGA+AGG	0.607196	1_4:-64087169	Msa0177200:intron
GACTGACCGCCGATTCAACA+GGG	0.609320	1_4:+64088443	None:intergenic
AAATTCCCCTGTTGAATCGG+CGG	0.628092	1_4:-64088449	Msa0177200:CDS
GAGCTTTGGAATGATAAGGA+AGG	0.647349	1_4:-64087033	Msa0177200:intron
GCTTCTTGGAGGATGATCGA+CGG	0.652262	1_4:+64088416	None:intergenic
GCAGGAAGAGGAGAAGCGAG+TGG	0.668776	1_4:+64088394	None:intergenic
GTTTAAAAGGATAGTTCGGG+GGG	0.670883	1_4:+64087578	None:intergenic
GTCGTCTCAAATTTCACTTG+GGG	0.674521	1_4:+64087553	None:intergenic
TCTTGGAGGATGATCGACGG+TGG	0.707980	1_4:+64088419	None:intergenic
ACTGACCGCCGATTCAACAG+GGG	0.708293	1_4:+64088444	None:intergenic
TGGATTGGCACAATTCAAGG+TGG	0.712983	1_4:-64087649	Msa0177200:CDS
AAATGTTTACAACAGAAGTG+CGG	0.720013	1_4:+64086656	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGAAATTTAGAAATATTTAA+GGG	+	chr1_4:64086636-64086655	None:intergenic	10.0%
!!	ATGAAATTTAGAAATATTTA+AGG	+	chr1_4:64086637-64086656	None:intergenic	10.0%
!!	TGAAATTTAGAAATATTTAA+GGG	+	chr1_4:64086636-64086655	None:intergenic	10.0%
!!	ATGAAATTTAGAAATATTTA+AGG	+	chr1_4:64086637-64086656	None:intergenic	10.0%
!!	AAATTTAGAAATATTTAAGG+GGG	+	chr1_4:64086634-64086653	None:intergenic	15.0%
!!	GAAATTTAGAAATATTTAAG+GGG	+	chr1_4:64086635-64086654	None:intergenic	15.0%
!!	AAAAAAACTAAATTAGAAGA+TGG	+	chr1_4:64086663-64086682	None:intergenic	15.0%
!!!	TTAAATTTTAAACTTTGATG+TGG	-	chr1_4:64086805-64086824	Msa0177200:intron	15.0%
!!!	CAGTCAATTTTTTTATTTTT+AGG	-	chr1_4:64086939-64086958	Msa0177200:intron	15.0%
!!	TCATTAAGAAACTAAATTTA+TGG	-	chr1_4:64087155-64087174	Msa0177200:intron	15.0%
!!	GCATTCATATTAAATATAAT+TGG	+	chr1_4:64087678-64087697	None:intergenic	15.0%
!!	TGTAAAAAATATTGTTACAA+AGG	-	chr1_4:64088451-64088470	Msa0177200:CDS	15.0%
!!	AAATTTAGAAATATTTAAGG+GGG	+	chr1_4:64086634-64086653	None:intergenic	15.0%
!!	GAAATTTAGAAATATTTAAG+GGG	+	chr1_4:64086635-64086654	None:intergenic	15.0%
!!	AAAAAAACTAAATTAGAAGA+TGG	+	chr1_4:64086663-64086682	None:intergenic	15.0%
!!!	TTAAATTTTAAACTTTGATG+TGG	-	chr1_4:64086805-64086824	Msa0177200:intron	15.0%
!!!	CAGTCAATTTTTTTATTTTT+AGG	-	chr1_4:64086939-64086958	Msa0177200:intron	15.0%
!!	TCATTAAGAAACTAAATTTA+TGG	-	chr1_4:64087155-64087174	Msa0177200:intron	15.0%
!!	GCATTCATATTAAATATAAT+TGG	+	chr1_4:64087678-64087697	None:intergenic	15.0%
!!	TGTAAAAAATATTGTTACAA+AGG	-	chr1_4:64088451-64088470	Msa0177200:CDS	15.0%
!!	AATTTAGAAATATTTAAGGG+GGG	+	chr1_4:64086633-64086652	None:intergenic	20.0%
!!	TTAAAAAAATCACATAATCC+AGG	-	chr1_4:64087589-64087608	Msa0177200:CDS	20.0%
!!	TAAAAAAATCACATAATCCA+GGG	-	chr1_4:64087590-64087609	Msa0177200:CDS	20.0%
!!	TCATCTACATATTTAATACT+AGG	+	chr1_4:64087700-64087719	None:intergenic	20.0%
!!	AGATCAATTGAACTAAAATT+TGG	+	chr1_4:64088050-64088069	None:intergenic	20.0%
!!	AATTGTATAAATCAACTTTC+AGG	+	chr1_4:64088268-64088287	None:intergenic	20.0%
!!	AATTTAGAAATATTTAAGGG+GGG	+	chr1_4:64086633-64086652	None:intergenic	20.0%
!!	TTAAAAAAATCACATAATCC+AGG	-	chr1_4:64087589-64087608	Msa0177200:CDS	20.0%
!!	TAAAAAAATCACATAATCCA+GGG	-	chr1_4:64087590-64087609	Msa0177200:CDS	20.0%
!!	TCATCTACATATTTAATACT+AGG	+	chr1_4:64087700-64087719	None:intergenic	20.0%
!!	AGATCAATTGAACTAAAATT+TGG	+	chr1_4:64088050-64088069	None:intergenic	20.0%
!!	AATTGTATAAATCAACTTTC+AGG	+	chr1_4:64088268-64088287	None:intergenic	20.0%
!!!	TTTTTAGTCTTGATCAGTTT+TGG	-	chr1_4:64086679-64086698	Msa0177200:three_prime_UTR	25.0%
!	ATCAAATTTCATTTCATGCA+TGG	+	chr1_4:64086755-64086774	None:intergenic	25.0%
!	ACACCATAAATTTGACAATA+AGG	+	chr1_4:64086965-64086984	None:intergenic	25.0%
!	ATTGTCAAATTTATGGTGTT+TGG	-	chr1_4:64086966-64086985	Msa0177200:intron	25.0%
!	GTACTTTACTTCTTCATATT+AGG	-	chr1_4:64087089-64087108	Msa0177200:intron	25.0%
!	TTTACTTCTTCATATTAGGT+TGG	-	chr1_4:64087093-64087112	Msa0177200:intron	25.0%
!	TTACTTCTTCATATTAGGTT+GGG	-	chr1_4:64087094-64087113	Msa0177200:intron	25.0%
!	AATCATGTGAAATATGTTGT+TGG	-	chr1_4:64087118-64087137	Msa0177200:intron	25.0%
!	ATCATGTGAAATATGTTGTT+GGG	-	chr1_4:64087119-64087138	Msa0177200:intron	25.0%
!	AGTTTCTTAATGATACAAGA+AGG	+	chr1_4:64087148-64087167	None:intergenic	25.0%
!	TAAAAATATTCTCACCATCA+GGG	+	chr1_4:64087295-64087314	None:intergenic	25.0%
!!!	ATGGTGAGAATATTTTTACA+TGG	-	chr1_4:64087297-64087316	Msa0177200:intron	25.0%
!!!	GAGAATATTTTTACATGGAT+TGG	-	chr1_4:64087302-64087321	Msa0177200:intron	25.0%
!	TTATAAGATAAACCCTCATA+AGG	+	chr1_4:64087353-64087372	None:intergenic	25.0%
!!!	GGTTTTAATCTTTGTAGATT+TGG	-	chr1_4:64088145-64088164	Msa0177200:intron	25.0%
!!	GAAAATAATTGCTATTGCTT+TGG	+	chr1_4:64088291-64088310	None:intergenic	25.0%
!	CAAAAAATGGGGAAATTTAT+AGG	+	chr1_4:64088357-64088376	None:intergenic	25.0%
!!!	TTTTTAGTCTTGATCAGTTT+TGG	-	chr1_4:64086679-64086698	Msa0177200:three_prime_UTR	25.0%
!	ATCAAATTTCATTTCATGCA+TGG	+	chr1_4:64086755-64086774	None:intergenic	25.0%
!	ACACCATAAATTTGACAATA+AGG	+	chr1_4:64086965-64086984	None:intergenic	25.0%
!	ATTGTCAAATTTATGGTGTT+TGG	-	chr1_4:64086966-64086985	Msa0177200:intron	25.0%
!	GTACTTTACTTCTTCATATT+AGG	-	chr1_4:64087089-64087108	Msa0177200:intron	25.0%
!	TTTACTTCTTCATATTAGGT+TGG	-	chr1_4:64087093-64087112	Msa0177200:intron	25.0%
!	TTACTTCTTCATATTAGGTT+GGG	-	chr1_4:64087094-64087113	Msa0177200:intron	25.0%
!	AATCATGTGAAATATGTTGT+TGG	-	chr1_4:64087118-64087137	Msa0177200:intron	25.0%
!	ATCATGTGAAATATGTTGTT+GGG	-	chr1_4:64087119-64087138	Msa0177200:intron	25.0%
!	AGTTTCTTAATGATACAAGA+AGG	+	chr1_4:64087148-64087167	None:intergenic	25.0%
!	TAAAAATATTCTCACCATCA+GGG	+	chr1_4:64087295-64087314	None:intergenic	25.0%
!!!	ATGGTGAGAATATTTTTACA+TGG	-	chr1_4:64087297-64087316	Msa0177200:intron	25.0%
!!!	GAGAATATTTTTACATGGAT+TGG	-	chr1_4:64087302-64087321	Msa0177200:intron	25.0%
!	TTATAAGATAAACCCTCATA+AGG	+	chr1_4:64087353-64087372	None:intergenic	25.0%
!!!	GGTTTTAATCTTTGTAGATT+TGG	-	chr1_4:64088145-64088164	Msa0177200:intron	25.0%
!!	GAAAATAATTGCTATTGCTT+TGG	+	chr1_4:64088291-64088310	None:intergenic	25.0%
!	CAAAAAATGGGGAAATTTAT+AGG	+	chr1_4:64088357-64088376	None:intergenic	25.0%
!!	AGGCCTTATTGTCAAATTTA+TGG	-	chr1_4:64086959-64086978	Msa0177200:intron	30.0%
	GTAAAAATATTCTCACCATC+AGG	+	chr1_4:64087296-64087315	None:intergenic	30.0%
	TCTAATTCATGAATACCTGA+AGG	+	chr1_4:64087487-64087506	None:intergenic	30.0%
	TTAAACTATTATCCGTGTGT+CGG	+	chr1_4:64087573-64087592	None:intergenic	30.0%
	TTCCTACTTTGTGATTGTAT+AGG	-	chr1_4:64087733-64087752	Msa0177200:intron	30.0%
	TCTGTCTATACAAAGTCTAT+TGG	-	chr1_4:64087793-64087812	Msa0177200:intron	30.0%
	TCTATACAAAGTCTATTGGA+AGG	-	chr1_4:64087797-64087816	Msa0177200:intron	30.0%
	TAGAAAATAACTGATCAGAC+AGG	+	chr1_4:64087868-64087887	None:intergenic	30.0%
	GAGCAATAACAACAAATAGT+TGG	+	chr1_4:64088020-64088039	None:intergenic	30.0%
	AAATGTTTACAACAGAAGTG+CGG	+	chr1_4:64088313-64088332	None:intergenic	30.0%
!	GAAGCATCATACAAAAAATG+GGG	+	chr1_4:64088368-64088387	None:intergenic	30.0%
!	CGAAGCATCATACAAAAAAT+GGG	+	chr1_4:64088369-64088388	None:intergenic	30.0%
!!!	CCATTTTTTGTATGATGCTT+CGG	-	chr1_4:64088367-64088386	Msa0177200:intron	30.0%
!	AAGTCATCAGAAATTTTCAG+AGG	+	chr1_4:64088418-64088437	None:intergenic	30.0%
!!	AGGCCTTATTGTCAAATTTA+TGG	-	chr1_4:64086959-64086978	Msa0177200:intron	30.0%
	GTAAAAATATTCTCACCATC+AGG	+	chr1_4:64087296-64087315	None:intergenic	30.0%
	TCTAATTCATGAATACCTGA+AGG	+	chr1_4:64087487-64087506	None:intergenic	30.0%
	TTAAACTATTATCCGTGTGT+CGG	+	chr1_4:64087573-64087592	None:intergenic	30.0%
	TTCCTACTTTGTGATTGTAT+AGG	-	chr1_4:64087733-64087752	Msa0177200:intron	30.0%
	TCTGTCTATACAAAGTCTAT+TGG	-	chr1_4:64087793-64087812	Msa0177200:intron	30.0%
	TCTATACAAAGTCTATTGGA+AGG	-	chr1_4:64087797-64087816	Msa0177200:intron	30.0%
	TAGAAAATAACTGATCAGAC+AGG	+	chr1_4:64087868-64087887	None:intergenic	30.0%
	GAGCAATAACAACAAATAGT+TGG	+	chr1_4:64088020-64088039	None:intergenic	30.0%
	AAATGTTTACAACAGAAGTG+CGG	+	chr1_4:64088313-64088332	None:intergenic	30.0%
!	GAAGCATCATACAAAAAATG+GGG	+	chr1_4:64088368-64088387	None:intergenic	30.0%
!	CGAAGCATCATACAAAAAAT+GGG	+	chr1_4:64088369-64088388	None:intergenic	30.0%
!!!	CCATTTTTTGTATGATGCTT+CGG	-	chr1_4:64088367-64088386	Msa0177200:intron	30.0%
!	AAGTCATCAGAAATTTTCAG+AGG	+	chr1_4:64088418-64088437	None:intergenic	30.0%
!	TTCAACAGGGGAATTTTCTT+CGG	+	chr1_4:64086513-64086532	None:intergenic	35.0%
	AGAAAATTCCCCTGTTGAAT+CGG	-	chr1_4:64086514-64086533	Msa0177200:three_prime_UTR	35.0%
	TTAGAAATATTTAAGGGGGG+AGG	+	chr1_4:64086630-64086649	None:intergenic	35.0%
	CAGACTACAGAAGGAATTAA+TGG	-	chr1_4:64086882-64086901	Msa0177200:intron	35.0%
!	AGTAAAGTACTAAGTATGCG+TGG	+	chr1_4:64087079-64087098	None:intergenic	35.0%
	TTCATTCGTTCTCACAAAGA+CGG	-	chr1_4:64087199-64087218	Msa0177200:CDS	35.0%
!!!	TTACTTTTTGTGCAGATGAG+TGG	-	chr1_4:64087245-64087264	Msa0177200:intron	35.0%
	TGGTTTAAAAGGATAGTTCG+GGG	+	chr1_4:64087393-64087412	None:intergenic	35.0%
	GTGGTTTAAAAGGATAGTTC+GGG	+	chr1_4:64087394-64087413	None:intergenic	35.0%
	GGTGGTTTAAAAGGATAGTT+CGG	+	chr1_4:64087395-64087414	None:intergenic	35.0%
!!	GGTAATGGAAAAAAGAAGCA+CGG	+	chr1_4:64087631-64087650	None:intergenic	35.0%
	GTCCTATACAATCACAAAGT+AGG	+	chr1_4:64087738-64087757	None:intergenic	35.0%
	TTGTGATTGTATAGGACAAG+TGG	-	chr1_4:64087741-64087760	Msa0177200:intron	35.0%
!	TTTGGAATGATAAGGAAGGT+TGG	-	chr1_4:64087937-64087956	Msa0177200:intron	35.0%
	TTCAATGACTCTATTCCTTG+AGG	-	chr1_4:64088074-64088093	Msa0177200:intron	35.0%
	TCAATGACTCTATTCCTTGA+GGG	-	chr1_4:64088075-64088094	Msa0177200:intron	35.0%
	TCATGCAGATTTCAAGAGAA+TGG	-	chr1_4:64088207-64088226	Msa0177200:intron	35.0%
!	ATAAATCAACTTTCAGGTGC+AGG	+	chr1_4:64088262-64088281	None:intergenic	35.0%
!	CCGAAGCATCATACAAAAAA+TGG	+	chr1_4:64088370-64088389	None:intergenic	35.0%
!	TTCAACAGGGGAATTTTCTT+CGG	+	chr1_4:64086513-64086532	None:intergenic	35.0%
	AGAAAATTCCCCTGTTGAAT+CGG	-	chr1_4:64086514-64086533	Msa0177200:three_prime_UTR	35.0%
	TTAGAAATATTTAAGGGGGG+AGG	+	chr1_4:64086630-64086649	None:intergenic	35.0%
	CAGACTACAGAAGGAATTAA+TGG	-	chr1_4:64086882-64086901	Msa0177200:intron	35.0%
!	AGTAAAGTACTAAGTATGCG+TGG	+	chr1_4:64087079-64087098	None:intergenic	35.0%
	TTCATTCGTTCTCACAAAGA+CGG	-	chr1_4:64087199-64087218	Msa0177200:CDS	35.0%
!!!	TTACTTTTTGTGCAGATGAG+TGG	-	chr1_4:64087245-64087264	Msa0177200:intron	35.0%
	TGGTTTAAAAGGATAGTTCG+GGG	+	chr1_4:64087393-64087412	None:intergenic	35.0%
	GTGGTTTAAAAGGATAGTTC+GGG	+	chr1_4:64087394-64087413	None:intergenic	35.0%
	GGTGGTTTAAAAGGATAGTT+CGG	+	chr1_4:64087395-64087414	None:intergenic	35.0%
!!	GGTAATGGAAAAAAGAAGCA+CGG	+	chr1_4:64087631-64087650	None:intergenic	35.0%
	GTCCTATACAATCACAAAGT+AGG	+	chr1_4:64087738-64087757	None:intergenic	35.0%
	TTGTGATTGTATAGGACAAG+TGG	-	chr1_4:64087741-64087760	Msa0177200:intron	35.0%
!	TTTGGAATGATAAGGAAGGT+TGG	-	chr1_4:64087937-64087956	Msa0177200:intron	35.0%
	TTCAATGACTCTATTCCTTG+AGG	-	chr1_4:64088074-64088093	Msa0177200:intron	35.0%
	TCAATGACTCTATTCCTTGA+GGG	-	chr1_4:64088075-64088094	Msa0177200:intron	35.0%
	TCATGCAGATTTCAAGAGAA+TGG	-	chr1_4:64088207-64088226	Msa0177200:intron	35.0%
!	ATAAATCAACTTTCAGGTGC+AGG	+	chr1_4:64088262-64088281	None:intergenic	35.0%
!	CCGAAGCATCATACAAAAAA+TGG	+	chr1_4:64088370-64088389	None:intergenic	35.0%
	ACACAACTTCCGTTTCTCAA+AGG	-	chr1_4:64086597-64086616	Msa0177200:three_prime_UTR	40.0%
!	GGAGATGAACCTTTGAGAAA+CGG	+	chr1_4:64086609-64086628	None:intergenic	40.0%
	GAAGGAATTAATGGCTCTCA+TGG	-	chr1_4:64086891-64086910	Msa0177200:intron	40.0%
!	GTTTGGTAACCTATGAAGCA+CGG	-	chr1_4:64086983-64087002	Msa0177200:intron	40.0%
	TAGTTACCCACTATGAAGCA+CGG	+	chr1_4:64087051-64087070	None:intergenic	40.0%
!	TCATCAGCATTTAGAGTGAG+TGG	+	chr1_4:64087225-64087244	None:intergenic	40.0%
!!	ACATGGATTGGCACAATTCA+AGG	-	chr1_4:64087314-64087333	Msa0177200:intron	40.0%
	TGGAAAAGGAACTCCTTATG+AGG	-	chr1_4:64087337-64087356	Msa0177200:intron	40.0%
	GGAAAAGGAACTCCTTATGA+GGG	-	chr1_4:64087338-64087357	Msa0177200:intron	40.0%
	GTTTAAAAGGATAGTTCGGG+GGG	+	chr1_4:64087391-64087410	None:intergenic	40.0%
	GGTTTAAAAGGATAGTTCGG+GGG	+	chr1_4:64087392-64087411	None:intergenic	40.0%
	TTCACTTGGGGTGGTTTAAA+AGG	+	chr1_4:64087404-64087423	None:intergenic	40.0%
	GTCGTCTCAAATTTCACTTG+GGG	+	chr1_4:64087416-64087435	None:intergenic	40.0%
	CGTCGTCTCAAATTTCACTT+GGG	+	chr1_4:64087417-64087436	None:intergenic	40.0%
	ACGTCGTCTCAAATTTCACT+TGG	+	chr1_4:64087418-64087437	None:intergenic	40.0%
	CATCCAAATGTTGACCAGTT+TGG	-	chr1_4:64087443-64087462	Msa0177200:intron	40.0%
	TTGCCAAACTGGTCAACATT+TGG	+	chr1_4:64087449-64087468	None:intergenic	40.0%
	CTAGACAAATGTTGCCAAAC+TGG	+	chr1_4:64087460-64087479	None:intergenic	40.0%
	CATTTGTCTAGACATCCTTC+AGG	-	chr1_4:64087469-64087488	Msa0177200:intron	40.0%
	ACATAATCCAGGGTAATCTG+AGG	-	chr1_4:64087600-64087619	Msa0177200:CDS	40.0%
	AGCAGTAAACACACAGGTAA+TGG	+	chr1_4:64087646-64087665	None:intergenic	40.0%
	TACCTGTGTGTTTACTGCTT+TGG	-	chr1_4:64087647-64087666	Msa0177200:CDS	40.0%
	ATCCAAAGCAGTAAACACAC+AGG	+	chr1_4:64087652-64087671	None:intergenic	40.0%
	CTGCAGCATAGTTGTTTAGA+GGG	+	chr1_4:64087914-64087933	None:intergenic	40.0%
	TCTGCAGCATAGTTGTTTAG+AGG	+	chr1_4:64087915-64087934	None:intergenic	40.0%
!!	TGCAGAGCTTTGGAATGATA+AGG	-	chr1_4:64087929-64087948	Msa0177200:intron	40.0%
!!	GAGCTTTGGAATGATAAGGA+AGG	-	chr1_4:64087933-64087952	Msa0177200:intron	40.0%
!!!	TGCAAGTTTTAGAACCCTCA+AGG	+	chr1_4:64088092-64088111	None:intergenic	40.0%
	CTAGTGCTCTAGTAGATTGT+AGG	-	chr1_4:64088124-64088143	Msa0177200:intron	40.0%
!!!	GGTCGAATGCGTATTTTAAC+TGG	-	chr1_4:64088166-64088185	Msa0177200:intron	40.0%
!!!	ATTTTAACTGGTGCTGCTCA+TGG	-	chr1_4:64088178-64088197	Msa0177200:intron	40.0%
	ACACAACTTCCGTTTCTCAA+AGG	-	chr1_4:64086597-64086616	Msa0177200:three_prime_UTR	40.0%
!	GGAGATGAACCTTTGAGAAA+CGG	+	chr1_4:64086609-64086628	None:intergenic	40.0%
	GAAGGAATTAATGGCTCTCA+TGG	-	chr1_4:64086891-64086910	Msa0177200:intron	40.0%
!	GTTTGGTAACCTATGAAGCA+CGG	-	chr1_4:64086983-64087002	Msa0177200:intron	40.0%
	TAGTTACCCACTATGAAGCA+CGG	+	chr1_4:64087051-64087070	None:intergenic	40.0%
!	TCATCAGCATTTAGAGTGAG+TGG	+	chr1_4:64087225-64087244	None:intergenic	40.0%
!!	ACATGGATTGGCACAATTCA+AGG	-	chr1_4:64087314-64087333	Msa0177200:intron	40.0%
	TGGAAAAGGAACTCCTTATG+AGG	-	chr1_4:64087337-64087356	Msa0177200:intron	40.0%
	GGAAAAGGAACTCCTTATGA+GGG	-	chr1_4:64087338-64087357	Msa0177200:intron	40.0%
	GTTTAAAAGGATAGTTCGGG+GGG	+	chr1_4:64087391-64087410	None:intergenic	40.0%
	GGTTTAAAAGGATAGTTCGG+GGG	+	chr1_4:64087392-64087411	None:intergenic	40.0%
	TTCACTTGGGGTGGTTTAAA+AGG	+	chr1_4:64087404-64087423	None:intergenic	40.0%
	GTCGTCTCAAATTTCACTTG+GGG	+	chr1_4:64087416-64087435	None:intergenic	40.0%
	CGTCGTCTCAAATTTCACTT+GGG	+	chr1_4:64087417-64087436	None:intergenic	40.0%
	ACGTCGTCTCAAATTTCACT+TGG	+	chr1_4:64087418-64087437	None:intergenic	40.0%
	CATCCAAATGTTGACCAGTT+TGG	-	chr1_4:64087443-64087462	Msa0177200:intron	40.0%
	TTGCCAAACTGGTCAACATT+TGG	+	chr1_4:64087449-64087468	None:intergenic	40.0%
	CTAGACAAATGTTGCCAAAC+TGG	+	chr1_4:64087460-64087479	None:intergenic	40.0%
	CATTTGTCTAGACATCCTTC+AGG	-	chr1_4:64087469-64087488	Msa0177200:intron	40.0%
	ACATAATCCAGGGTAATCTG+AGG	-	chr1_4:64087600-64087619	Msa0177200:CDS	40.0%
	AGCAGTAAACACACAGGTAA+TGG	+	chr1_4:64087646-64087665	None:intergenic	40.0%
	TACCTGTGTGTTTACTGCTT+TGG	-	chr1_4:64087647-64087666	Msa0177200:CDS	40.0%
	ATCCAAAGCAGTAAACACAC+AGG	+	chr1_4:64087652-64087671	None:intergenic	40.0%
	CTGCAGCATAGTTGTTTAGA+GGG	+	chr1_4:64087914-64087933	None:intergenic	40.0%
	TCTGCAGCATAGTTGTTTAG+AGG	+	chr1_4:64087915-64087934	None:intergenic	40.0%
!!	TGCAGAGCTTTGGAATGATA+AGG	-	chr1_4:64087929-64087948	Msa0177200:intron	40.0%
!!	GAGCTTTGGAATGATAAGGA+AGG	-	chr1_4:64087933-64087952	Msa0177200:intron	40.0%
!!!	TGCAAGTTTTAGAACCCTCA+AGG	+	chr1_4:64088092-64088111	None:intergenic	40.0%
	CTAGTGCTCTAGTAGATTGT+AGG	-	chr1_4:64088124-64088143	Msa0177200:intron	40.0%
!!!	GGTCGAATGCGTATTTTAAC+TGG	-	chr1_4:64088166-64088185	Msa0177200:intron	40.0%
!!!	ATTTTAACTGGTGCTGCTCA+TGG	-	chr1_4:64088178-64088197	Msa0177200:intron	40.0%
!	AACAGGGGAATTTTCTTCGG+CGG	+	chr1_4:64086510-64086529	None:intergenic	45.0%
	AAATTCCCCTGTTGAATCGG+CGG	-	chr1_4:64086517-64086536	Msa0177200:three_prime_UTR	45.0%
	GTGCAATTGCAGACTACAGA+AGG	-	chr1_4:64086873-64086892	Msa0177200:intron	45.0%
	TGTCTGTATCCGTGCTTCAT+AGG	+	chr1_4:64086995-64087014	None:intergenic	45.0%
	ATGAAGCACGGATACAGACA+CGG	-	chr1_4:64086995-64087014	Msa0177200:intron	45.0%
	TATGAAGCACGGACACTTCT+TGG	+	chr1_4:64087040-64087059	None:intergenic	45.0%
	AAGTGTCCGTGCTTCATAGT+GGG	-	chr1_4:64087042-64087061	Msa0177200:CDS	45.0%
!	CTTTTTGTGCAGATGAGTGG+AGG	-	chr1_4:64087248-64087267	Msa0177200:intron	45.0%
!!	TGGATTGGCACAATTCAAGG+TGG	-	chr1_4:64087317-64087336	Msa0177200:intron	45.0%
	GGCACAATTCAAGGTGGAAA+AGG	-	chr1_4:64087323-64087342	Msa0177200:intron	45.0%
	GTCTCAAATTTCACTTGGGG+TGG	+	chr1_4:64087413-64087432	None:intergenic	45.0%
	ACTGACACAAACACAGACAC+CGG	-	chr1_4:64087539-64087558	Msa0177200:CDS	45.0%
	CTGATCAGACAGGAACACAA+AGG	+	chr1_4:64087858-64087877	None:intergenic	45.0%
	TCTAACAGCAGAGCCTAACT+TGG	-	chr1_4:64087884-64087903	Msa0177200:intron	45.0%
	TTTAGAGGGCTCTCCAAGTT+AGG	+	chr1_4:64087900-64087919	None:intergenic	45.0%
	ACAACTATGCTGCAGAGCTT+TGG	-	chr1_4:64087919-64087938	Msa0177200:intron	45.0%
	GTCCACAAGCAGTATTTAGC+TGG	-	chr1_4:64088229-64088248	Msa0177200:intron	45.0%
	CTCCAGCTAAATACTGCTTG+TGG	+	chr1_4:64088234-64088253	None:intergenic	45.0%
!	AACAGGGGAATTTTCTTCGG+CGG	+	chr1_4:64086510-64086529	None:intergenic	45.0%
	AAATTCCCCTGTTGAATCGG+CGG	-	chr1_4:64086517-64086536	Msa0177200:three_prime_UTR	45.0%
	GTGCAATTGCAGACTACAGA+AGG	-	chr1_4:64086873-64086892	Msa0177200:intron	45.0%
	TGTCTGTATCCGTGCTTCAT+AGG	+	chr1_4:64086995-64087014	None:intergenic	45.0%
	ATGAAGCACGGATACAGACA+CGG	-	chr1_4:64086995-64087014	Msa0177200:intron	45.0%
	TATGAAGCACGGACACTTCT+TGG	+	chr1_4:64087040-64087059	None:intergenic	45.0%
	AAGTGTCCGTGCTTCATAGT+GGG	-	chr1_4:64087042-64087061	Msa0177200:CDS	45.0%
!	CTTTTTGTGCAGATGAGTGG+AGG	-	chr1_4:64087248-64087267	Msa0177200:intron	45.0%
!!	TGGATTGGCACAATTCAAGG+TGG	-	chr1_4:64087317-64087336	Msa0177200:intron	45.0%
	GGCACAATTCAAGGTGGAAA+AGG	-	chr1_4:64087323-64087342	Msa0177200:intron	45.0%
	GTCTCAAATTTCACTTGGGG+TGG	+	chr1_4:64087413-64087432	None:intergenic	45.0%
	ACTGACACAAACACAGACAC+CGG	-	chr1_4:64087539-64087558	Msa0177200:CDS	45.0%
	CTGATCAGACAGGAACACAA+AGG	+	chr1_4:64087858-64087877	None:intergenic	45.0%
	TCTAACAGCAGAGCCTAACT+TGG	-	chr1_4:64087884-64087903	Msa0177200:intron	45.0%
	TTTAGAGGGCTCTCCAAGTT+AGG	+	chr1_4:64087900-64087919	None:intergenic	45.0%
	ACAACTATGCTGCAGAGCTT+TGG	-	chr1_4:64087919-64087938	Msa0177200:intron	45.0%
	GTCCACAAGCAGTATTTAGC+TGG	-	chr1_4:64088229-64088248	Msa0177200:intron	45.0%
	CTCCAGCTAAATACTGCTTG+TGG	+	chr1_4:64088234-64088253	None:intergenic	45.0%
	GCTTCTTGGAGGATGATCGA+CGG	+	chr1_4:64086553-64086572	None:intergenic	50.0%
	GAAGTTGTGTCAGCAGGAAG+AGG	+	chr1_4:64086587-64086606	None:intergenic	50.0%
	GAAACGGAAGTTGTGTCAGC+AGG	+	chr1_4:64086593-64086612	None:intergenic	50.0%
	TTCTTGGTTTAGGCGTGTCC+TGG	+	chr1_4:64087024-64087043	None:intergenic	50.0%
	GCACGGACACTTCTTGGTTT+AGG	+	chr1_4:64087034-64087053	None:intergenic	50.0%
!	GAAGTGTCCGTGCTTCATAG+TGG	-	chr1_4:64087041-64087060	Msa0177200:CDS	50.0%
	CAGATGAGTGGAGGAGATCT+TGG	-	chr1_4:64087257-64087276	Msa0177200:intron	50.0%
!	GGAGTATCTGCTTTCCCTGA+TGG	-	chr1_4:64087278-64087297	Msa0177200:intron	50.0%
	ATAGTTCGGGGGGAAACGTA+AGG	+	chr1_4:64087381-64087400	None:intergenic	50.0%
	GCTTCTTGGAGGATGATCGA+CGG	+	chr1_4:64086553-64086572	None:intergenic	50.0%
	GAAGTTGTGTCAGCAGGAAG+AGG	+	chr1_4:64086587-64086606	None:intergenic	50.0%
	GAAACGGAAGTTGTGTCAGC+AGG	+	chr1_4:64086593-64086612	None:intergenic	50.0%
	TTCTTGGTTTAGGCGTGTCC+TGG	+	chr1_4:64087024-64087043	None:intergenic	50.0%
	GCACGGACACTTCTTGGTTT+AGG	+	chr1_4:64087034-64087053	None:intergenic	50.0%
!	GAAGTGTCCGTGCTTCATAG+TGG	-	chr1_4:64087041-64087060	Msa0177200:CDS	50.0%
	CAGATGAGTGGAGGAGATCT+TGG	-	chr1_4:64087257-64087276	Msa0177200:intron	50.0%
!	GGAGTATCTGCTTTCCCTGA+TGG	-	chr1_4:64087278-64087297	Msa0177200:intron	50.0%
	ATAGTTCGGGGGGAAACGTA+AGG	+	chr1_4:64087381-64087400	None:intergenic	50.0%
	CTTCGGCGGTGGTGTTTGAT+CGG	+	chr1_4:64086496-64086515	None:intergenic	55.0%
!	AGGGGAATTTTCTTCGGCGG+TGG	+	chr1_4:64086507-64086526	None:intergenic	55.0%
!!	ACTGACCGCCGATTCAACAG+GGG	+	chr1_4:64086525-64086544	None:intergenic	55.0%
!!	GACTGACCGCCGATTCAACA+GGG	+	chr1_4:64086526-64086545	None:intergenic	55.0%
	TCTTGGAGGATGATCGACGG+TGG	+	chr1_4:64086550-64086569	None:intergenic	55.0%
	AGAAGCGAGTGGCTTCTTGG+AGG	+	chr1_4:64086564-64086583	None:intergenic	55.0%
	AGGAGAAGCGAGTGGCTTCT+TGG	+	chr1_4:64086567-64086586	None:intergenic	55.0%
	GGACACTCCTCAGATTACCC+TGG	+	chr1_4:64087610-64087629	None:intergenic	55.0%
	CTTCGGCGGTGGTGTTTGAT+CGG	+	chr1_4:64086496-64086515	None:intergenic	55.0%
!	AGGGGAATTTTCTTCGGCGG+TGG	+	chr1_4:64086507-64086526	None:intergenic	55.0%
!!	ACTGACCGCCGATTCAACAG+GGG	+	chr1_4:64086525-64086544	None:intergenic	55.0%
!!	GACTGACCGCCGATTCAACA+GGG	+	chr1_4:64086526-64086545	None:intergenic	55.0%
	TCTTGGAGGATGATCGACGG+TGG	+	chr1_4:64086550-64086569	None:intergenic	55.0%
	AGAAGCGAGTGGCTTCTTGG+AGG	+	chr1_4:64086564-64086583	None:intergenic	55.0%
	AGGAGAAGCGAGTGGCTTCT+TGG	+	chr1_4:64086567-64086586	None:intergenic	55.0%
	GGACACTCCTCAGATTACCC+TGG	+	chr1_4:64087610-64087629	None:intergenic	55.0%
!!	CGACTGACCGCCGATTCAAC+AGG	+	chr1_4:64086527-64086546	None:intergenic	60.0%
	GCAGGAAGAGGAGAAGCGAG+TGG	+	chr1_4:64086575-64086594	None:intergenic	60.0%
	CGGATACAGACACGGACACC+AGG	-	chr1_4:64087003-64087022	Msa0177200:intron	60.0%
!!	CCGTGTGTCGGTGTTGTGTC+CGG	+	chr1_4:64087561-64087580	None:intergenic	60.0%
	CCGGACACAACACCGACACA+CGG	-	chr1_4:64087558-64087577	Msa0177200:CDS	60.0%
!!	CGACTGACCGCCGATTCAAC+AGG	+	chr1_4:64086527-64086546	None:intergenic	60.0%
	GCAGGAAGAGGAGAAGCGAG+TGG	+	chr1_4:64086575-64086594	None:intergenic	60.0%
	CGGATACAGACACGGACACC+AGG	-	chr1_4:64087003-64087022	Msa0177200:intron	60.0%
!!	CCGTGTGTCGGTGTTGTGTC+CGG	+	chr1_4:64087561-64087580	None:intergenic	60.0%
	CCGGACACAACACCGACACA+CGG	-	chr1_4:64087558-64087577	Msa0177200:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	64086485	64088503	64086485	ID=Msa0177200;Name=Msa0177200
chr1_4	mRNA	64086485	64088503	64086485	ID=Msa0177200-mRNA-1;Parent=Msa0177200;Name=Msa0177200-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0\|0.5\|0.6\|1\|0.25\|0.4\|5\|227\|166
chr1_4	exon	64086485	64086773	64086485	ID=Msa0177200-mRNA-1:exon:20870;Parent=Msa0177200-mRNA-1
chr1_4	exon	64087034	64087093	64087034	ID=Msa0177200-mRNA-1:exon:20869;Parent=Msa0177200-mRNA-1
chr1_4	exon	64087170	64087233	64087170	ID=Msa0177200-mRNA-1:exon:20868;Parent=Msa0177200-mRNA-1
chr1_4	exon	64087537	64087728	64087537	ID=Msa0177200-mRNA-1:exon:20867;Parent=Msa0177200-mRNA-1
chr1_4	exon	64088381	64088503	64088381	ID=Msa0177200-mRNA-1:exon:20866;Parent=Msa0177200-mRNA-1
chr1_4	CDS	64088381	64088503	64088381	ID=Msa0177200-mRNA-1:cds;Parent=Msa0177200-mRNA-1
chr1_4	CDS	64087537	64087728	64087537	ID=Msa0177200-mRNA-1:cds;Parent=Msa0177200-mRNA-1
chr1_4	CDS	64087170	64087233	64087170	ID=Msa0177200-mRNA-1:cds;Parent=Msa0177200-mRNA-1
chr1_4	CDS	64087034	64087093	64087034	ID=Msa0177200-mRNA-1:cds;Parent=Msa0177200-mRNA-1
chr1_4	CDS	64086712	64086773	64086712	ID=Msa0177200-mRNA-1:cds;Parent=Msa0177200-mRNA-1
chr1_4	three_prime_UTR	64086485	64086711	64086485	ID=Msa0177200-mRNA-1:three_prime_utr;Parent=Msa0177200-mRNA-1

Gene Sequence

>Msa0177200

ATGGAGGTCCGATCAAACACCACCGCCGAAGAAAATTCCCCTGTTGAATCGGCGGTCAGTCGCCACCGTCGATCATCCTCCAAGAAGCCACTCGCTTCTCCTCTTCCTGCTGACACAACTTCCATGAGTGGAGGAGATCTTGGAGTATCTGCTTTCCCTGATGGTGAGAATATTTTTACATGGATTGGCACAATTCAAGGTGGAAAAGGAACTCCTTATGAGGGTTTATCTTATAAACTTTCCTTACGTTTCCCCCCGAACTATCCTTTTAAACCACCCCAAGTGAAATTTGAGACGACGTGCTTTCATCCAAATGACAAGTGGTCTTCAGCTTATGACTGTAGAACTATGCTTCTGTCTATACAAAGTCTATTGGAAGAGCCTAACTTGGAGAGCCCTCTAAACAACTATGCTGCAGAGCTTTGGAATGATAAGGAAGATTTCAAGAGAATGGTCCACAAGCAGTATTTAGCTGGAGAAGCACCTGCACCTGAAAGTTGA

Protein sequence

>Msa0177200

MEVRSNTTAEENSPVESAVSRHRRSSSKKPLASPLPADTTSMSGGDLGVSAFPDGENIFTWIGTIQGGKGTPYEGLSYKLSLRFPPNYPFKPPQVKFETTCFHPNDKWSSAYDCRTMLLSIQSLLEEPNLESPLNNYAAELWNDKEDFKRMVHKQYLAGEAPAPES*