Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040140 | sp|Q9LUH8|HFA6B_ARATH | 52.078 | 361 | 113 | 6 | 22 | 323 | 43 | 402 | 5.06e-117 | 346 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0040140 | TF | HSF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040140 | Msa0134440 | 0.832641 | 8.416219e-56 | -8.615850e-47 |
| Msa0040140 | Msa0180560 | 0.850143 | 2.053815e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040140 | MtrunA17_Chr1g0204741 | 93.939 | 330 | 16 | 1 | 1 | 326 | 1 | 330 | 0.0 | 634 |
| Msa0040140 | MtrunA17_Chr7g0260331 | 52.976 | 336 | 127 | 6 | 17 | 323 | 26 | 359 | 5.61e-109 | 321 |
| Msa0040140 | MtrunA17_Chr3g0135831 | 62.963 | 216 | 73 | 4 | 27 | 240 | 33 | 243 | 3.95e-90 | 274 |
| Msa0040140 | MtrunA17_Chr5g0410881 | 58.744 | 223 | 80 | 4 | 27 | 239 | 19 | 239 | 1.40e-82 | 258 |
| Msa0040140 | MtrunA17_Chr1g0185131 | 48.875 | 311 | 121 | 9 | 23 | 307 | 15 | 313 | 8.13e-76 | 236 |
| Msa0040140 | MtrunA17_Chr4g0039891 | 56.667 | 210 | 80 | 4 | 39 | 240 | 11 | 217 | 2.45e-72 | 231 |
| Msa0040140 | MtrunA17_Chr4g0071051 | 47.541 | 244 | 113 | 5 | 12 | 250 | 73 | 306 | 4.43e-69 | 221 |
| Msa0040140 | MtrunA17_Chr8g0379701 | 38.408 | 289 | 158 | 5 | 39 | 318 | 11 | 288 | 2.35e-56 | 187 |
| Msa0040140 | MtrunA17_Chr8g0392001 | 51.000 | 200 | 84 | 6 | 40 | 227 | 22 | 219 | 1.56e-53 | 179 |
| Msa0040140 | MtrunA17_Chr6g0485571 | 43.627 | 204 | 108 | 3 | 40 | 243 | 11 | 207 | 3.72e-52 | 175 |
| Msa0040140 | MtrunA17_Chr2g0330821 | 45.263 | 190 | 95 | 3 | 34 | 220 | 73 | 256 | 3.30e-51 | 173 |
| Msa0040140 | MtrunA17_Chr6g0467041 | 42.478 | 226 | 115 | 5 | 40 | 262 | 22 | 235 | 7.39e-50 | 169 |
| Msa0040140 | MtrunA17_Chr8g0378061 | 46.040 | 202 | 97 | 6 | 41 | 239 | 23 | 215 | 1.34e-48 | 169 |
| Msa0040140 | MtrunA17_Chr2g0284481 | 40.957 | 188 | 107 | 1 | 31 | 214 | 6 | 193 | 8.28e-43 | 152 |
| Msa0040140 | MtrunA17_Chr3g0134031 | 65.049 | 103 | 36 | 0 | 34 | 136 | 18 | 120 | 3.35e-41 | 147 |
| Msa0040140 | MtrunA17_Chr5g0441531 | 71.579 | 95 | 27 | 0 | 38 | 132 | 23 | 117 | 8.90e-41 | 143 |
| Msa0040140 | MtrunA17_Chr5g0397881 | 64.894 | 94 | 33 | 0 | 38 | 131 | 22 | 115 | 9.81e-38 | 137 |
| Msa0040140 | MtrunA17_Chr1g0203601 | 62.766 | 94 | 35 | 0 | 38 | 131 | 16 | 109 | 2.77e-37 | 135 |
| Msa0040140 | MtrunA17_Chr8g0375041 | 43.114 | 167 | 80 | 3 | 37 | 188 | 6 | 172 | 2.89e-37 | 134 |
| Msa0040140 | MtrunA17_Chr6g0472421 | 62.766 | 94 | 35 | 0 | 38 | 131 | 31 | 124 | 3.21e-37 | 136 |
| Msa0040140 | MtrunA17_Chr7g0257331 | 52.941 | 119 | 49 | 2 | 31 | 142 | 9 | 127 | 8.23e-36 | 129 |
| Msa0040140 | MtrunA17_Chr5g0402291 | 60.417 | 96 | 38 | 0 | 37 | 132 | 6 | 101 | 5.32e-35 | 129 |
| Msa0040140 | MtrunA17_Chr4g0047421 | 42.331 | 163 | 85 | 3 | 38 | 193 | 31 | 191 | 1.45e-32 | 120 |
| Msa0040140 | MtrunA17_Chr1g0179311 | 45.185 | 135 | 72 | 2 | 97 | 231 | 11 | 143 | 7.94e-31 | 119 |
| Msa0040140 | MtrunA17_Chr1g0179321 | 67.123 | 73 | 24 | 0 | 27 | 99 | 36 | 108 | 2.22e-28 | 106 |
| Msa0040140 | MtrunA17_Chr4g0023771 | 61.194 | 67 | 26 | 0 | 31 | 97 | 6 | 72 | 9.98e-21 | 85.9 |
| Msa0040140 | MtrunA17_Chr2g0330841 | 31.250 | 144 | 87 | 4 | 100 | 240 | 41 | 175 | 1.55e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0040140 | AT3G22830.1 | 52.078 | 361 | 113 | 6 | 22 | 323 | 43 | 402 | 5.14e-118 | 346 |
| Msa0040140 | AT2G26150.1 | 44.688 | 320 | 150 | 8 | 27 | 324 | 31 | 345 | 5.32e-85 | 260 |
| Msa0040140 | AT2G26150.4 | 44.688 | 320 | 150 | 8 | 27 | 324 | 31 | 345 | 5.32e-85 | 260 |
| Msa0040140 | AT3G51910.1 | 57.820 | 211 | 74 | 3 | 31 | 240 | 20 | 216 | 1.90e-81 | 248 |
| Msa0040140 | AT4G17750.1 | 53.414 | 249 | 90 | 6 | 16 | 240 | 22 | 268 | 3.11e-78 | 247 |
| Msa0040140 | AT5G16820.1 | 58.065 | 217 | 82 | 3 | 36 | 244 | 23 | 238 | 4.66e-77 | 244 |
| Msa0040140 | AT5G16820.2 | 58.065 | 217 | 82 | 3 | 36 | 244 | 23 | 238 | 4.66e-77 | 244 |
| Msa0040140 | AT1G32330.2 | 53.750 | 240 | 94 | 4 | 16 | 239 | 11 | 249 | 1.52e-76 | 243 |
| Msa0040140 | AT1G32330.1 | 53.750 | 240 | 94 | 4 | 16 | 239 | 11 | 249 | 1.57e-76 | 243 |
| Msa0040140 | AT5G43840.1 | 57.732 | 194 | 69 | 1 | 27 | 220 | 6 | 186 | 3.33e-75 | 233 |
| Msa0040140 | AT3G02990.1 | 56.604 | 212 | 85 | 2 | 39 | 244 | 22 | 232 | 1.06e-73 | 235 |
| Msa0040140 | AT3G63350.1 | 51.852 | 216 | 101 | 1 | 18 | 233 | 6 | 218 | 2.12e-72 | 226 |
| Msa0040140 | AT5G03720.2 | 40.714 | 280 | 155 | 2 | 14 | 288 | 29 | 302 | 2.15e-63 | 206 |
| Msa0040140 | AT5G03720.1 | 40.714 | 280 | 155 | 2 | 14 | 288 | 29 | 302 | 2.15e-63 | 206 |
| Msa0040140 | AT1G67970.1 | 48.837 | 215 | 101 | 5 | 40 | 248 | 19 | 230 | 1.91e-58 | 192 |
| Msa0040140 | AT3G24520.1 | 43.069 | 202 | 93 | 2 | 40 | 241 | 17 | 196 | 1.71e-50 | 171 |
| Msa0040140 | AT4G13980.1 | 43.350 | 203 | 102 | 3 | 41 | 239 | 24 | 217 | 1.94e-49 | 171 |
| Msa0040140 | AT5G54070.1 | 40.708 | 226 | 122 | 4 | 33 | 254 | 63 | 280 | 5.85e-48 | 164 |
| Msa0040140 | AT2G41690.1 | 39.706 | 204 | 106 | 4 | 13 | 209 | 23 | 216 | 1.47e-42 | 147 |
| Msa0040140 | AT4G18880.1 | 45.026 | 191 | 103 | 1 | 32 | 220 | 7 | 197 | 2.51e-41 | 148 |
| Msa0040140 | AT5G45710.3 | 42.640 | 197 | 108 | 2 | 39 | 232 | 12 | 206 | 6.13e-41 | 146 |
| Msa0040140 | AT5G45710.1 | 42.640 | 197 | 108 | 2 | 39 | 232 | 12 | 206 | 6.13e-41 | 146 |
| Msa0040140 | AT1G46264.1 | 64.423 | 104 | 37 | 0 | 31 | 134 | 25 | 128 | 8.88e-41 | 145 |
| Msa0040140 | AT4G11660.1 | 60.825 | 97 | 38 | 0 | 38 | 134 | 57 | 153 | 9.10e-38 | 138 |
| Msa0040140 | AT2G26150.3 | 36.842 | 247 | 129 | 8 | 100 | 324 | 49 | 290 | 1.33e-37 | 136 |
| Msa0040140 | AT2G26150.2 | 36.842 | 247 | 129 | 8 | 100 | 324 | 49 | 290 | 1.33e-37 | 136 |
| Msa0040140 | AT4G36990.1 | 54.464 | 112 | 47 | 1 | 38 | 149 | 12 | 119 | 4.20e-36 | 132 |
| Msa0040140 | AT5G62020.1 | 61.702 | 94 | 36 | 0 | 38 | 131 | 21 | 114 | 1.46e-35 | 130 |
| Msa0040140 | AT4G18870.1 | 37.097 | 124 | 75 | 1 | 29 | 149 | 135 | 258 | 7.75e-21 | 91.3 |
| Msa0040140 | AT4G18870.1 | 48.315 | 89 | 41 | 2 | 41 | 127 | 14 | 99 | 1.09e-19 | 87.8 |
| Msa0040140 | AT4G19630.1 | 39.623 | 106 | 52 | 4 | 36 | 131 | 7 | 110 | 1.59e-13 | 67.0 |
| Msa0040140 | AT1G77570.1 | 37.778 | 90 | 53 | 2 | 41 | 127 | 27 | 116 | 4.83e-12 | 63.5 |
Find 67 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATCAAAGCTTCCTATTT+AGG | 0.148117 | 1_1:-70127701 | None:intergenic |
| ACTAACTGTTGCAAGAAATT+AGG | 0.251206 | 1_1:-70127368 | None:intergenic |
| GGAACAATAGCTTTGTTGTT+TGG | 0.274853 | 1_1:+70126184 | Msa0040140:CDS |
| TAAGAGATATTGAAGTGTTT+TGG | 0.285980 | 1_1:+70127585 | Msa0040140:CDS |
| TAAATTGTAGGGGTTTAAAA+AGG | 0.303820 | 1_1:+70127016 | Msa0040140:intron |
| TTCAAGTTGATTAATTTGAT+TGG | 0.327468 | 1_1:-70127561 | None:intergenic |
| GTTGATGCAGATGTTGAATT+AGG | 0.327469 | 1_1:+70127473 | Msa0040140:CDS |
| GAACAATAGCTTTGTTGTTT+GGG | 0.327590 | 1_1:+70126185 | Msa0040140:CDS |
| CCACAAATCATATAGTTTCA+TGG | 0.352549 | 1_1:+70126154 | Msa0040140:CDS |
| TGCCTCTAGTCCTCCTAAAT+AGG | 0.370362 | 1_1:+70127688 | Msa0040140:CDS |
| ATTAAGTTGCCGGACAAAAC+TGG | 0.370804 | 1_1:-70126265 | None:intergenic |
| CTTGTCTGTCGCGCCTCAAC+CGG | 0.383841 | 1_1:-70127205 | None:intergenic |
| TTGTTGTGCTTGAAGAATCT+AGG | 0.383883 | 1_1:-70126237 | None:intergenic |
| TGTGTTGAGCTGGGAAGGTT+TGG | 0.384498 | 1_1:+70127161 | Msa0040140:CDS |
| CATATAGTTTCATGGAGTAC+TGG | 0.392040 | 1_1:+70126162 | Msa0040140:CDS |
| AAAACAGATGATGAATTTCA+TGG | 0.398561 | 1_1:+70127328 | Msa0040140:CDS |
| GGAATGGAGAAAAGAGTTAG+AGG | 0.408095 | 1_1:+70127400 | Msa0040140:CDS |
| TTCTTCTAATGTTCTTCAAA+AGG | 0.412252 | 1_1:-70127094 | None:intergenic |
| CCATGAAACTATATGATTTG+TGG | 0.413159 | 1_1:-70126154 | None:intergenic |
| AGGGAAGGACTTCATGAAAA+TGG | 0.418874 | 1_1:+70126084 | Msa0040140:CDS |
| TCACATAGGTATTAAGTTGC+CGG | 0.435323 | 1_1:-70126275 | None:intergenic |
| TGAAGTCCTTCCCTTGGTTG+AGG | 0.441996 | 1_1:-70126075 | None:intergenic |
| ACATCTGCATCAACATTACT+AGG | 0.447700 | 1_1:-70127464 | None:intergenic |
| TATTGAAGATGTTGATGTAT+TGG | 0.457804 | 1_1:+70127646 | Msa0040140:CDS |
| GCTAATGAGATGTTTCTAAG+AGG | 0.461550 | 1_1:+70127062 | Msa0040140:CDS |
| GGGATGAAGGAGGAGTTTGT+TGG | 0.463474 | 1_1:+70126021 | Msa0040140:CDS |
| ATCTTGAAGCAATGGAAAGA+AGG | 0.466935 | 1_1:+70127282 | Msa0040140:CDS |
| GAATCGAAGTGGACCGGTTG+AGG | 0.469935 | 1_1:+70127192 | Msa0040140:CDS |
| ATGAATATGAATCTTCATCA+TGG | 0.483530 | 1_1:+70125997 | Msa0040140:CDS |
| CGTCATGTGTTGAGCTGGGA+AGG | 0.490133 | 1_1:+70127156 | Msa0040140:CDS |
| GCGCGACAGACAAGTTCTAA+TGG | 0.493467 | 1_1:+70127214 | Msa0040140:CDS |
| AAAGGTTGATGCAGATAGGT+GGG | 0.494489 | 1_1:+70127034 | Msa0040140:CDS |
| AGACCCGTCATGTGTTGAGC+TGG | 0.495058 | 1_1:+70127151 | Msa0040140:CDS |
| ATGAAGGAGGAGTTTGTTGG+AGG | 0.495698 | 1_1:+70126024 | Msa0040140:CDS |
| AGTTAGTTCAGCAGAAGGAA+TGG | 0.496467 | 1_1:+70127384 | Msa0040140:CDS |
| AGAAGGAGAACTATTGATGA+AGG | 0.503305 | 1_1:+70127440 | Msa0040140:CDS |
| AGGTTCACCAACCACAGAAA+AGG | 0.504219 | 1_1:-70126055 | None:intergenic |
| AGGGAGAAGAATAATAGAAA+AGG | 0.505225 | 1_1:-70126217 | None:intergenic |
| TGTTGTGCTTGAAGAATCTA+GGG | 0.511168 | 1_1:-70126236 | None:intergenic |
| TCTTCATCATGGTGGGATGA+AGG | 0.511768 | 1_1:+70126008 | Msa0040140:CDS |
| ATCAAAGCTTCCTATTTAGG+AGG | 0.518160 | 1_1:-70127698 | None:intergenic |
| ACAAGTTCTAATGGTTGAGT+TGG | 0.523658 | 1_1:+70127223 | Msa0040140:CDS |
| TGGCAAGATTTGTTTAAGGA+GGG | 0.525419 | 1_1:+70127605 | Msa0040140:CDS |
| TTGGCAAGATTTGTTTAAGG+AGG | 0.525683 | 1_1:+70127604 | Msa0040140:CDS |
| TAGAACTCATCTTGAAGCAA+TGG | 0.536822 | 1_1:+70127274 | Msa0040140:CDS |
| AAAAGGTTGATGCAGATAGG+TGG | 0.546223 | 1_1:+70127033 | Msa0040140:CDS |
| TTCCCAGCTCAACACATGAC+GGG | 0.552361 | 1_1:-70127154 | None:intergenic |
| GATGATGAATTTCATGGCAA+GGG | 0.556515 | 1_1:+70127334 | Msa0040140:CDS |
| ATATAGTTTCATGGAGTACT+GGG | 0.559738 | 1_1:+70126163 | Msa0040140:CDS |
| GACCCGTCATGTGTTGAGCT+GGG | 0.564277 | 1_1:+70127152 | Msa0040140:CDS |
| TTCCTATTTAGGAGGACTAG+AGG | 0.567154 | 1_1:-70127690 | None:intergenic |
| AGATGATGAATTTCATGGCA+AGG | 0.575521 | 1_1:+70127333 | Msa0040140:CDS |
| CTTCCCAGCTCAACACATGA+CGG | 0.580827 | 1_1:-70127155 | None:intergenic |
| GCAACAGTTAGTTCAGCAGA+AGG | 0.585939 | 1_1:+70127379 | Msa0040140:CDS |
| TGAACAACATCAAGATGTTG+AGG | 0.592174 | 1_1:+70127532 | Msa0040140:CDS |
| AGAATAATAGAAAAGGCTTG+AGG | 0.598445 | 1_1:-70126210 | None:intergenic |
| TAGACAGAATCGAAGTGGAC+CGG | 0.600966 | 1_1:+70127186 | Msa0040140:CDS |
| GATGTATTGGCTGAGCAACT+TGG | 0.605475 | 1_1:+70127659 | Msa0040140:CDS |
| AATATGAATCTTCATCATGG+TGG | 0.612258 | 1_1:+70126000 | Msa0040140:CDS |
| TGGATTAGACAGAATCGAAG+TGG | 0.612543 | 1_1:+70127181 | Msa0040140:CDS |
| GAAGGAGAACTATTGATGAA+GGG | 0.618906 | 1_1:+70127441 | Msa0040140:CDS |
| GAAACTATATGATTTGTGGA+AGG | 0.623337 | 1_1:-70126150 | None:intergenic |
| ATATGAATCTTCATCATGGT+GGG | 0.643772 | 1_1:+70126001 | Msa0040140:CDS |
| TCATCATGGTGGGATGAAGG+AGG | 0.650270 | 1_1:+70126011 | Msa0040140:CDS |
| GGTGAACCTCAACCAAGGGA+AGG | 0.659511 | 1_1:+70126069 | Msa0040140:CDS |
| TGGTTGGTGAACCTCAACCA+AGG | 0.664718 | 1_1:+70126064 | Msa0040140:CDS |
| GGTTGGTGAACCTCAACCAA+GGG | 0.679182 | 1_1:+70126065 | Msa0040140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTGAAATTAAATTGTA+GGG | + | chr1_1:70127005-70127024 | Msa0040140:intron | 10.0% |
| !!! | AAATTTGAAATTAAATTGTA+GGG | + | chr1_1:70127005-70127024 | Msa0040140:intron | 10.0% |
| !!! | AACATTTTTGTTTCATTATA+TGG | + | chr1_1:70126429-70126448 | Msa0040140:intron | 15.0% |
| !!! | GAAATTTGAAATTAAATTGT+AGG | + | chr1_1:70127004-70127023 | Msa0040140:intron | 15.0% |
| !!! | AATTTGAAATTAAATTGTAG+GGG | + | chr1_1:70127006-70127025 | Msa0040140:intron | 15.0% |
| !!! | AACATTTTTGTTTCATTATA+TGG | + | chr1_1:70126429-70126448 | Msa0040140:intron | 15.0% |
| !!! | GAAATTTGAAATTAAATTGT+AGG | + | chr1_1:70127004-70127023 | Msa0040140:intron | 15.0% |
| !!! | AATTTGAAATTAAATTGTAG+GGG | + | chr1_1:70127006-70127025 | Msa0040140:intron | 15.0% |
| !! | AGTTGAAATATAAAAGTCTT+AGG | + | chr1_1:70126497-70126516 | Msa0040140:intron | 20.0% |
| !!! | TTTGACTTTTCTCTATATTA+GGG | - | chr1_1:70126625-70126644 | None:intergenic | 20.0% |
| !!! | TTTTGACTTTTCTCTATATT+AGG | - | chr1_1:70126626-70126645 | None:intergenic | 20.0% |
| !! | AAACAAACACTAATTAACAT+TGG | - | chr1_1:70126938-70126957 | None:intergenic | 20.0% |
| !!! | AAATTTTTTCTAAGAAGAGA+AGG | + | chr1_1:70127423-70127442 | Msa0040140:CDS | 20.0% |
| !!! | TTCAAGTTGATTAATTTGAT+TGG | - | chr1_1:70127564-70127583 | None:intergenic | 20.0% |
| !! | AGTTGAAATATAAAAGTCTT+AGG | + | chr1_1:70126497-70126516 | Msa0040140:intron | 20.0% |
| !!! | TTTGACTTTTCTCTATATTA+GGG | - | chr1_1:70126625-70126644 | None:intergenic | 20.0% |
| !!! | TTTTGACTTTTCTCTATATT+AGG | - | chr1_1:70126626-70126645 | None:intergenic | 20.0% |
| !! | AAACAAACACTAATTAACAT+TGG | - | chr1_1:70126938-70126957 | None:intergenic | 20.0% |
| !!! | AAATTTTTTCTAAGAAGAGA+AGG | + | chr1_1:70127423-70127442 | Msa0040140:CDS | 20.0% |
| !!! | TTCAAGTTGATTAATTTGAT+TGG | - | chr1_1:70127564-70127583 | None:intergenic | 20.0% |
| ! | ATGAATATGAATCTTCATCA+TGG | + | chr1_1:70125997-70126016 | Msa0040140:CDS | 25.0% |
| !!! | CTATATCATATGTTTTTGTG+AGG | - | chr1_1:70126122-70126141 | None:intergenic | 25.0% |
| ! | TTAAATACTACTACTCACAT+AGG | - | chr1_1:70126292-70126311 | None:intergenic | 25.0% |
| ! | TATCTCATCAGATTAAACAA+AGG | - | chr1_1:70126360-70126379 | None:intergenic | 25.0% |
| ! | TTGTTTAATCTGATGAGATA+AGG | + | chr1_1:70126360-70126379 | Msa0040140:intron | 25.0% |
| ! | TTATATTTCAACTGCAATTG+AGG | - | chr1_1:70126490-70126509 | None:intergenic | 25.0% |
| !!! | TAAAAGTCTTAGGCTATTTT+TGG | + | chr1_1:70126507-70126526 | Msa0040140:intron | 25.0% |
| !!! | AAAAGTCTTAGGCTATTTTT+GGG | + | chr1_1:70126508-70126527 | Msa0040140:intron | 25.0% |
| !!! | ATTGTGTGAGTTATTTTTCT+TGG | + | chr1_1:70126586-70126605 | Msa0040140:intron | 25.0% |
| ! | AGAGAAAAGTCAAAATGTAT+TGG | + | chr1_1:70126631-70126650 | Msa0040140:intron | 25.0% |
| ! | AAAAGTCAAAATGTATTGGA+CGG | + | chr1_1:70126635-70126654 | Msa0040140:intron | 25.0% |
| !!! | TAGTGTTTGTTTTCATTGAA+TGG | + | chr1_1:70126946-70126965 | Msa0040140:intron | 25.0% |
| !! | GTTTTCATTGAATGGAATTA+TGG | + | chr1_1:70126954-70126973 | Msa0040140:intron | 25.0% |
| !!! | GCATTTTGATTTGAAAATGA+AGG | + | chr1_1:70126980-70126999 | Msa0040140:intron | 25.0% |
| ! | TAAATTGTAGGGGTTTAAAA+AGG | + | chr1_1:70127016-70127035 | Msa0040140:intron | 25.0% |
| ! | TTCTTCTAATGTTCTTCAAA+AGG | - | chr1_1:70127097-70127116 | None:intergenic | 25.0% |
| ! | AAAACAGATGATGAATTTCA+TGG | + | chr1_1:70127328-70127347 | Msa0040140:CDS | 25.0% |
| !!! | TAAGAGATATTGAAGTGTTT+TGG | + | chr1_1:70127585-70127604 | Msa0040140:CDS | 25.0% |
| ! | TATTGAAGATGTTGATGTAT+TGG | + | chr1_1:70127646-70127665 | Msa0040140:CDS | 25.0% |
| ! | ATGAATATGAATCTTCATCA+TGG | + | chr1_1:70125997-70126016 | Msa0040140:CDS | 25.0% |
| !!! | CTATATCATATGTTTTTGTG+AGG | - | chr1_1:70126122-70126141 | None:intergenic | 25.0% |
| ! | TTAAATACTACTACTCACAT+AGG | - | chr1_1:70126292-70126311 | None:intergenic | 25.0% |
| ! | TATCTCATCAGATTAAACAA+AGG | - | chr1_1:70126360-70126379 | None:intergenic | 25.0% |
| ! | TTGTTTAATCTGATGAGATA+AGG | + | chr1_1:70126360-70126379 | Msa0040140:intron | 25.0% |
| ! | TTATATTTCAACTGCAATTG+AGG | - | chr1_1:70126490-70126509 | None:intergenic | 25.0% |
| !!! | TAAAAGTCTTAGGCTATTTT+TGG | + | chr1_1:70126507-70126526 | Msa0040140:intron | 25.0% |
| !!! | AAAAGTCTTAGGCTATTTTT+GGG | + | chr1_1:70126508-70126527 | Msa0040140:intron | 25.0% |
| !!! | ATTGTGTGAGTTATTTTTCT+TGG | + | chr1_1:70126586-70126605 | Msa0040140:intron | 25.0% |
| ! | AGAGAAAAGTCAAAATGTAT+TGG | + | chr1_1:70126631-70126650 | Msa0040140:intron | 25.0% |
| ! | AAAAGTCAAAATGTATTGGA+CGG | + | chr1_1:70126635-70126654 | Msa0040140:intron | 25.0% |
| !!! | TAGTGTTTGTTTTCATTGAA+TGG | + | chr1_1:70126946-70126965 | Msa0040140:intron | 25.0% |
| !! | GTTTTCATTGAATGGAATTA+TGG | + | chr1_1:70126954-70126973 | Msa0040140:intron | 25.0% |
| !!! | GCATTTTGATTTGAAAATGA+AGG | + | chr1_1:70126980-70126999 | Msa0040140:intron | 25.0% |
| ! | TAAATTGTAGGGGTTTAAAA+AGG | + | chr1_1:70127016-70127035 | Msa0040140:intron | 25.0% |
| ! | TTCTTCTAATGTTCTTCAAA+AGG | - | chr1_1:70127097-70127116 | None:intergenic | 25.0% |
| ! | AAAACAGATGATGAATTTCA+TGG | + | chr1_1:70127328-70127347 | Msa0040140:CDS | 25.0% |
| !!! | TAAGAGATATTGAAGTGTTT+TGG | + | chr1_1:70127585-70127604 | Msa0040140:CDS | 25.0% |
| ! | TATTGAAGATGTTGATGTAT+TGG | + | chr1_1:70127646-70127665 | Msa0040140:CDS | 25.0% |
| AATATGAATCTTCATCATGG+TGG | + | chr1_1:70126000-70126019 | Msa0040140:CDS | 30.0% | |
| ATATGAATCTTCATCATGGT+GGG | + | chr1_1:70126001-70126020 | Msa0040140:CDS | 30.0% | |
| !! | TCATATGTTTTTGTGAGGAA+TGG | - | chr1_1:70126117-70126136 | None:intergenic | 30.0% |
| ! | GAAACTATATGATTTGTGGA+AGG | - | chr1_1:70126153-70126172 | None:intergenic | 30.0% |
| CCATGAAACTATATGATTTG+TGG | - | chr1_1:70126157-70126176 | None:intergenic | 30.0% | |
| CCACAAATCATATAGTTTCA+TGG | + | chr1_1:70126154-70126173 | Msa0040140:CDS | 30.0% | |
| ! | ATATAGTTTCATGGAGTACT+GGG | + | chr1_1:70126163-70126182 | Msa0040140:CDS | 30.0% |
| !! | GAACAATAGCTTTGTTGTTT+GGG | + | chr1_1:70126185-70126204 | Msa0040140:CDS | 30.0% |
| AGAATAATAGAAAAGGCTTG+AGG | - | chr1_1:70126213-70126232 | None:intergenic | 30.0% | |
| AGGGAGAAGAATAATAGAAA+AGG | - | chr1_1:70126220-70126239 | None:intergenic | 30.0% | |
| ATTGTCTCTTATGATGAGAA+GGG | - | chr1_1:70126392-70126411 | None:intergenic | 30.0% | |
| TATTGTCTCTTATGATGAGA+AGG | - | chr1_1:70126393-70126412 | None:intergenic | 30.0% | |
| ! | CTTTGGAAAGAAATGAATGA+AGG | + | chr1_1:70126547-70126566 | Msa0040140:intron | 30.0% |
| AAAGTCAAAATGTATTGGAC+GGG | + | chr1_1:70126636-70126655 | Msa0040140:intron | 30.0% | |
| AAACACGACATTGATACATT+TGG | + | chr1_1:70126831-70126850 | Msa0040140:intron | 30.0% | |
| !! | TTAAAAAGGTTGATGCAGAT+AGG | + | chr1_1:70127030-70127049 | Msa0040140:CDS | 30.0% |
| ACTAACTGTTGCAAGAAATT+AGG | - | chr1_1:70127371-70127390 | None:intergenic | 30.0% | |
| !! | GTTTTGGCAAGATTTGTTTA+AGG | + | chr1_1:70127601-70127620 | Msa0040140:CDS | 30.0% |
| AATATGAATCTTCATCATGG+TGG | + | chr1_1:70126000-70126019 | Msa0040140:CDS | 30.0% | |
| ATATGAATCTTCATCATGGT+GGG | + | chr1_1:70126001-70126020 | Msa0040140:CDS | 30.0% | |
| !! | TCATATGTTTTTGTGAGGAA+TGG | - | chr1_1:70126117-70126136 | None:intergenic | 30.0% |
| ! | GAAACTATATGATTTGTGGA+AGG | - | chr1_1:70126153-70126172 | None:intergenic | 30.0% |
| CCATGAAACTATATGATTTG+TGG | - | chr1_1:70126157-70126176 | None:intergenic | 30.0% | |
| CCACAAATCATATAGTTTCA+TGG | + | chr1_1:70126154-70126173 | Msa0040140:CDS | 30.0% | |
| ! | ATATAGTTTCATGGAGTACT+GGG | + | chr1_1:70126163-70126182 | Msa0040140:CDS | 30.0% |
| !! | GAACAATAGCTTTGTTGTTT+GGG | + | chr1_1:70126185-70126204 | Msa0040140:CDS | 30.0% |
| AGAATAATAGAAAAGGCTTG+AGG | - | chr1_1:70126213-70126232 | None:intergenic | 30.0% | |
| AGGGAGAAGAATAATAGAAA+AGG | - | chr1_1:70126220-70126239 | None:intergenic | 30.0% | |
| ATTGTCTCTTATGATGAGAA+GGG | - | chr1_1:70126392-70126411 | None:intergenic | 30.0% | |
| TATTGTCTCTTATGATGAGA+AGG | - | chr1_1:70126393-70126412 | None:intergenic | 30.0% | |
| ! | CTTTGGAAAGAAATGAATGA+AGG | + | chr1_1:70126547-70126566 | Msa0040140:intron | 30.0% |
| AAAGTCAAAATGTATTGGAC+GGG | + | chr1_1:70126636-70126655 | Msa0040140:intron | 30.0% | |
| AAACACGACATTGATACATT+TGG | + | chr1_1:70126831-70126850 | Msa0040140:intron | 30.0% | |
| !! | TTAAAAAGGTTGATGCAGAT+AGG | + | chr1_1:70127030-70127049 | Msa0040140:CDS | 30.0% |
| ACTAACTGTTGCAAGAAATT+AGG | - | chr1_1:70127371-70127390 | None:intergenic | 30.0% | |
| !! | GTTTTGGCAAGATTTGTTTA+AGG | + | chr1_1:70127601-70127620 | Msa0040140:CDS | 30.0% |
| !! | TATGTTTTTGTGAGGAATGG+TGG | - | chr1_1:70126114-70126133 | None:intergenic | 35.0% |
| CATATAGTTTCATGGAGTAC+TGG | + | chr1_1:70126162-70126181 | Msa0040140:CDS | 35.0% | |
| !! | GGAACAATAGCTTTGTTGTT+TGG | + | chr1_1:70126184-70126203 | Msa0040140:CDS | 35.0% |
| TGTTGTGCTTGAAGAATCTA+GGG | - | chr1_1:70126239-70126258 | None:intergenic | 35.0% | |
| TTGTTGTGCTTGAAGAATCT+AGG | - | chr1_1:70126240-70126259 | None:intergenic | 35.0% | |
| !! | ACAATTTCTCCAGTTTTGTC+CGG | + | chr1_1:70126256-70126275 | Msa0040140:CDS | 35.0% |
| ! | TCACATAGGTATTAAGTTGC+CGG | - | chr1_1:70126278-70126297 | None:intergenic | 35.0% |
| !!! | TTAGGCTATTTTTGGGAGTT+AGG | + | chr1_1:70126515-70126534 | Msa0040140:intron | 35.0% |
| GAGTTAGGAATGAATGACTT+TGG | + | chr1_1:70126530-70126549 | Msa0040140:intron | 35.0% | |
| AAGTCAAAATGTATTGGACG+GGG | + | chr1_1:70126637-70126656 | Msa0040140:intron | 35.0% | |
| GTAGATAATATGACATCACG+AGG | + | chr1_1:70126752-70126771 | Msa0040140:intron | 35.0% | |
| TAACATTGGCATAGACATAG+AGG | - | chr1_1:70126924-70126943 | None:intergenic | 35.0% | |
| ! | GCTAATGAGATGTTTCTAAG+AGG | + | chr1_1:70127062-70127081 | Msa0040140:CDS | 35.0% |
| ! | ACAAGTTCTAATGGTTGAGT+TGG | + | chr1_1:70127223-70127242 | Msa0040140:CDS | 35.0% |
| TAGAACTCATCTTGAAGCAA+TGG | + | chr1_1:70127274-70127293 | Msa0040140:CDS | 35.0% | |
| ATCTTGAAGCAATGGAAAGA+AGG | + | chr1_1:70127282-70127301 | Msa0040140:CDS | 35.0% | |
| AGATGATGAATTTCATGGCA+AGG | + | chr1_1:70127333-70127352 | Msa0040140:CDS | 35.0% | |
| GATGATGAATTTCATGGCAA+GGG | + | chr1_1:70127334-70127353 | Msa0040140:CDS | 35.0% | |
| AGAAGGAGAACTATTGATGA+AGG | + | chr1_1:70127440-70127459 | Msa0040140:CDS | 35.0% | |
| GAAGGAGAACTATTGATGAA+GGG | + | chr1_1:70127441-70127460 | Msa0040140:CDS | 35.0% | |
| ACATCTGCATCAACATTACT+AGG | - | chr1_1:70127467-70127486 | None:intergenic | 35.0% | |
| GTTGATGCAGATGTTGAATT+AGG | + | chr1_1:70127473-70127492 | Msa0040140:CDS | 35.0% | |
| TGAACAACATCAAGATGTTG+AGG | + | chr1_1:70127532-70127551 | Msa0040140:CDS | 35.0% | |
| ! | TTGGCAAGATTTGTTTAAGG+AGG | + | chr1_1:70127604-70127623 | Msa0040140:CDS | 35.0% |
| ! | TGGCAAGATTTGTTTAAGGA+GGG | + | chr1_1:70127605-70127624 | Msa0040140:CDS | 35.0% |
| !! | TATGTTTTTGTGAGGAATGG+TGG | - | chr1_1:70126114-70126133 | None:intergenic | 35.0% |
| CATATAGTTTCATGGAGTAC+TGG | + | chr1_1:70126162-70126181 | Msa0040140:CDS | 35.0% | |
| !! | GGAACAATAGCTTTGTTGTT+TGG | + | chr1_1:70126184-70126203 | Msa0040140:CDS | 35.0% |
| TGTTGTGCTTGAAGAATCTA+GGG | - | chr1_1:70126239-70126258 | None:intergenic | 35.0% | |
| TTGTTGTGCTTGAAGAATCT+AGG | - | chr1_1:70126240-70126259 | None:intergenic | 35.0% | |
| !! | ACAATTTCTCCAGTTTTGTC+CGG | + | chr1_1:70126256-70126275 | Msa0040140:CDS | 35.0% |
| ! | TCACATAGGTATTAAGTTGC+CGG | - | chr1_1:70126278-70126297 | None:intergenic | 35.0% |
| !!! | TTAGGCTATTTTTGGGAGTT+AGG | + | chr1_1:70126515-70126534 | Msa0040140:intron | 35.0% |
| GAGTTAGGAATGAATGACTT+TGG | + | chr1_1:70126530-70126549 | Msa0040140:intron | 35.0% | |
| AAGTCAAAATGTATTGGACG+GGG | + | chr1_1:70126637-70126656 | Msa0040140:intron | 35.0% | |
| GTAGATAATATGACATCACG+AGG | + | chr1_1:70126752-70126771 | Msa0040140:intron | 35.0% | |
| TAACATTGGCATAGACATAG+AGG | - | chr1_1:70126924-70126943 | None:intergenic | 35.0% | |
| ! | GCTAATGAGATGTTTCTAAG+AGG | + | chr1_1:70127062-70127081 | Msa0040140:CDS | 35.0% |
| ! | ACAAGTTCTAATGGTTGAGT+TGG | + | chr1_1:70127223-70127242 | Msa0040140:CDS | 35.0% |
| TAGAACTCATCTTGAAGCAA+TGG | + | chr1_1:70127274-70127293 | Msa0040140:CDS | 35.0% | |
| ATCTTGAAGCAATGGAAAGA+AGG | + | chr1_1:70127282-70127301 | Msa0040140:CDS | 35.0% | |
| AGATGATGAATTTCATGGCA+AGG | + | chr1_1:70127333-70127352 | Msa0040140:CDS | 35.0% | |
| GATGATGAATTTCATGGCAA+GGG | + | chr1_1:70127334-70127353 | Msa0040140:CDS | 35.0% | |
| AGAAGGAGAACTATTGATGA+AGG | + | chr1_1:70127440-70127459 | Msa0040140:CDS | 35.0% | |
| GAAGGAGAACTATTGATGAA+GGG | + | chr1_1:70127441-70127460 | Msa0040140:CDS | 35.0% | |
| ACATCTGCATCAACATTACT+AGG | - | chr1_1:70127467-70127486 | None:intergenic | 35.0% | |
| GTTGATGCAGATGTTGAATT+AGG | + | chr1_1:70127473-70127492 | Msa0040140:CDS | 35.0% | |
| TGAACAACATCAAGATGTTG+AGG | + | chr1_1:70127532-70127551 | Msa0040140:CDS | 35.0% | |
| ! | TTGGCAAGATTTGTTTAAGG+AGG | + | chr1_1:70127604-70127623 | Msa0040140:CDS | 35.0% |
| ! | TGGCAAGATTTGTTTAAGGA+GGG | + | chr1_1:70127605-70127624 | Msa0040140:CDS | 35.0% |
| ! | AGGAAGTTCTTCCTTTTCTG+TGG | + | chr1_1:70126044-70126063 | Msa0040140:CDS | 40.0% |
| ! | AGTTCTTCCTTTTCTGTGGT+TGG | + | chr1_1:70126048-70126067 | Msa0040140:CDS | 40.0% |
| ! | TTTTCATGAAGTCCTTCCCT+TGG | - | chr1_1:70126084-70126103 | None:intergenic | 40.0% |
| AGGGAAGGACTTCATGAAAA+TGG | + | chr1_1:70126084-70126103 | Msa0040140:CDS | 40.0% | |
| ! | ATTAAGTTGCCGGACAAAAC+TGG | - | chr1_1:70126268-70126287 | None:intergenic | 40.0% |
| !! | AAAAGGTTGATGCAGATAGG+TGG | + | chr1_1:70127033-70127052 | Msa0040140:CDS | 40.0% |
| !! | AAAGGTTGATGCAGATAGGT+GGG | + | chr1_1:70127034-70127053 | Msa0040140:CDS | 40.0% |
| ! | TGGATTAGACAGAATCGAAG+TGG | + | chr1_1:70127181-70127200 | Msa0040140:CDS | 40.0% |
| AGTTAGTTCAGCAGAAGGAA+TGG | + | chr1_1:70127384-70127403 | Msa0040140:CDS | 40.0% | |
| GGAATGGAGAAAAGAGTTAG+AGG | + | chr1_1:70127400-70127419 | Msa0040140:CDS | 40.0% | |
| ! | AGGAAGTTCTTCCTTTTCTG+TGG | + | chr1_1:70126044-70126063 | Msa0040140:CDS | 40.0% |
| ! | AGTTCTTCCTTTTCTGTGGT+TGG | + | chr1_1:70126048-70126067 | Msa0040140:CDS | 40.0% |
| ! | TTTTCATGAAGTCCTTCCCT+TGG | - | chr1_1:70126084-70126103 | None:intergenic | 40.0% |
| AGGGAAGGACTTCATGAAAA+TGG | + | chr1_1:70126084-70126103 | Msa0040140:CDS | 40.0% | |
| ! | ATTAAGTTGCCGGACAAAAC+TGG | - | chr1_1:70126268-70126287 | None:intergenic | 40.0% |
| !! | AAAAGGTTGATGCAGATAGG+TGG | + | chr1_1:70127033-70127052 | Msa0040140:CDS | 40.0% |
| !! | AAAGGTTGATGCAGATAGGT+GGG | + | chr1_1:70127034-70127053 | Msa0040140:CDS | 40.0% |
| ! | TGGATTAGACAGAATCGAAG+TGG | + | chr1_1:70127181-70127200 | Msa0040140:CDS | 40.0% |
| AGTTAGTTCAGCAGAAGGAA+TGG | + | chr1_1:70127384-70127403 | Msa0040140:CDS | 40.0% | |
| GGAATGGAGAAAAGAGTTAG+AGG | + | chr1_1:70127400-70127419 | Msa0040140:CDS | 40.0% | |
| ! | TCTTCATCATGGTGGGATGA+AGG | + | chr1_1:70126008-70126027 | Msa0040140:CDS | 45.0% |
| !! | ATGAAGGAGGAGTTTGTTGG+AGG | + | chr1_1:70126024-70126043 | Msa0040140:CDS | 45.0% |
| AGGTTCACCAACCACAGAAA+AGG | - | chr1_1:70126058-70126077 | None:intergenic | 45.0% | |
| ! | GTTTTTGTGAGGAATGGTGG+AGG | - | chr1_1:70126111-70126130 | None:intergenic | 45.0% |
| TAGACAGAATCGAAGTGGAC+CGG | + | chr1_1:70127186-70127205 | Msa0040140:CDS | 45.0% | |
| GCAACAGTTAGTTCAGCAGA+AGG | + | chr1_1:70127379-70127398 | Msa0040140:CDS | 45.0% | |
| !! | GATGTATTGGCTGAGCAACT+TGG | + | chr1_1:70127659-70127678 | Msa0040140:CDS | 45.0% |
| ! | TCTTCATCATGGTGGGATGA+AGG | + | chr1_1:70126008-70126027 | Msa0040140:CDS | 45.0% |
| !! | ATGAAGGAGGAGTTTGTTGG+AGG | + | chr1_1:70126024-70126043 | Msa0040140:CDS | 45.0% |
| AGGTTCACCAACCACAGAAA+AGG | - | chr1_1:70126058-70126077 | None:intergenic | 45.0% | |
| ! | GTTTTTGTGAGGAATGGTGG+AGG | - | chr1_1:70126111-70126130 | None:intergenic | 45.0% |
| TAGACAGAATCGAAGTGGAC+CGG | + | chr1_1:70127186-70127205 | Msa0040140:CDS | 45.0% | |
| GCAACAGTTAGTTCAGCAGA+AGG | + | chr1_1:70127379-70127398 | Msa0040140:CDS | 45.0% | |
| !! | GATGTATTGGCTGAGCAACT+TGG | + | chr1_1:70127659-70127678 | Msa0040140:CDS | 45.0% |
| ! | TCATCATGGTGGGATGAAGG+AGG | + | chr1_1:70126011-70126030 | Msa0040140:CDS | 50.0% |
| GGGATGAAGGAGGAGTTTGT+TGG | + | chr1_1:70126021-70126040 | Msa0040140:CDS | 50.0% | |
| !! | TGGTTGGTGAACCTCAACCA+AGG | + | chr1_1:70126064-70126083 | Msa0040140:CDS | 50.0% |
| !! | GGTTGGTGAACCTCAACCAA+GGG | + | chr1_1:70126065-70126084 | Msa0040140:CDS | 50.0% |
| TGAAGTCCTTCCCTTGGTTG+AGG | - | chr1_1:70126078-70126097 | None:intergenic | 50.0% | |
| TTCCCAGCTCAACACATGAC+GGG | - | chr1_1:70127157-70127176 | None:intergenic | 50.0% | |
| CTTCCCAGCTCAACACATGA+CGG | - | chr1_1:70127158-70127177 | None:intergenic | 50.0% | |
| TGTGTTGAGCTGGGAAGGTT+TGG | + | chr1_1:70127161-70127180 | Msa0040140:CDS | 50.0% | |
| ! | GCGCGACAGACAAGTTCTAA+TGG | + | chr1_1:70127214-70127233 | Msa0040140:CDS | 50.0% |
| ! | TCATCATGGTGGGATGAAGG+AGG | + | chr1_1:70126011-70126030 | Msa0040140:CDS | 50.0% |
| GGGATGAAGGAGGAGTTTGT+TGG | + | chr1_1:70126021-70126040 | Msa0040140:CDS | 50.0% | |
| !! | TGGTTGGTGAACCTCAACCA+AGG | + | chr1_1:70126064-70126083 | Msa0040140:CDS | 50.0% |
| !! | GGTTGGTGAACCTCAACCAA+GGG | + | chr1_1:70126065-70126084 | Msa0040140:CDS | 50.0% |
| TGAAGTCCTTCCCTTGGTTG+AGG | - | chr1_1:70126078-70126097 | None:intergenic | 50.0% | |
| TTCCCAGCTCAACACATGAC+GGG | - | chr1_1:70127157-70127176 | None:intergenic | 50.0% | |
| CTTCCCAGCTCAACACATGA+CGG | - | chr1_1:70127158-70127177 | None:intergenic | 50.0% | |
| TGTGTTGAGCTGGGAAGGTT+TGG | + | chr1_1:70127161-70127180 | Msa0040140:CDS | 50.0% | |
| ! | GCGCGACAGACAAGTTCTAA+TGG | + | chr1_1:70127214-70127233 | Msa0040140:CDS | 50.0% |
| GGTGAACCTCAACCAAGGGA+AGG | + | chr1_1:70126069-70126088 | Msa0040140:CDS | 55.0% | |
| AGACCCGTCATGTGTTGAGC+TGG | + | chr1_1:70127151-70127170 | Msa0040140:CDS | 55.0% | |
| GACCCGTCATGTGTTGAGCT+GGG | + | chr1_1:70127152-70127171 | Msa0040140:CDS | 55.0% | |
| CGTCATGTGTTGAGCTGGGA+AGG | + | chr1_1:70127156-70127175 | Msa0040140:CDS | 55.0% | |
| GAATCGAAGTGGACCGGTTG+AGG | + | chr1_1:70127192-70127211 | Msa0040140:CDS | 55.0% | |
| GGTGAACCTCAACCAAGGGA+AGG | + | chr1_1:70126069-70126088 | Msa0040140:CDS | 55.0% | |
| AGACCCGTCATGTGTTGAGC+TGG | + | chr1_1:70127151-70127170 | Msa0040140:CDS | 55.0% | |
| GACCCGTCATGTGTTGAGCT+GGG | + | chr1_1:70127152-70127171 | Msa0040140:CDS | 55.0% | |
| CGTCATGTGTTGAGCTGGGA+AGG | + | chr1_1:70127156-70127175 | Msa0040140:CDS | 55.0% | |
| GAATCGAAGTGGACCGGTTG+AGG | + | chr1_1:70127192-70127211 | Msa0040140:CDS | 55.0% | |
| CTTGTCTGTCGCGCCTCAAC+CGG | - | chr1_1:70127208-70127227 | None:intergenic | 60.0% | |
| CTTGTCTGTCGCGCCTCAAC+CGG | - | chr1_1:70127208-70127227 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 70125997 | 70127709 | 70125997 | ID=Msa0040140;Name=Msa0040140 |
| chr1_1 | mRNA | 70125997 | 70127709 | 70125997 | ID=Msa0040140-mRNA-1;Parent=Msa0040140;Name=Msa0040140-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|326 |
| chr1_1 | exon | 70125997 | 70126293 | 70125997 | ID=Msa0040140-mRNA-1:exon:23049;Parent=Msa0040140-mRNA-1 |
| chr1_1 | exon | 70127026 | 70127709 | 70127026 | ID=Msa0040140-mRNA-1:exon:23050;Parent=Msa0040140-mRNA-1 |
| chr1_1 | CDS | 70125997 | 70126293 | 70125997 | ID=Msa0040140-mRNA-1:cds;Parent=Msa0040140-mRNA-1 |
| chr1_1 | CDS | 70127026 | 70127709 | 70127026 | ID=Msa0040140-mRNA-1:cds;Parent=Msa0040140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
