Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134440 | XP_013469753.1 | 93.939 | 330 | 16 | 1 | 1 | 326 | 1 | 330 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134440 | sp|Q9LUH8|HFA6B_ARATH | 52.078 | 361 | 113 | 6 | 22 | 323 | 43 | 402 | 2.37e-118 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134440 | A0A072VQ54 | 93.939 | 330 | 16 | 1 | 1 | 326 | 1 | 330 | 0.0 | 635 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0134440 | TF | HSF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040140 | Msa0134440 | 0.832641 | 8.416219e-56 | -8.615850e-47 |
| Msa0087850 | Msa0134440 | 0.925806 | 1.112849e-90 | -8.615850e-47 |
| Msa0134440 | Msa0180560 | 0.855560 | 5.811341e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134440 | MtrunA17_Chr1g0204741 | 93.939 | 330 | 16 | 1 | 1 | 326 | 1 | 330 | 0.0 | 635 |
| Msa0134440 | MtrunA17_Chr7g0260331 | 53.274 | 336 | 126 | 6 | 17 | 323 | 26 | 359 | 6.83e-109 | 321 |
| Msa0134440 | MtrunA17_Chr3g0135831 | 62.963 | 216 | 73 | 4 | 27 | 240 | 33 | 243 | 5.99e-91 | 276 |
| Msa0134440 | MtrunA17_Chr5g0410881 | 58.296 | 223 | 81 | 4 | 27 | 239 | 19 | 239 | 1.21e-81 | 256 |
| Msa0134440 | MtrunA17_Chr1g0185131 | 48.710 | 310 | 123 | 8 | 23 | 307 | 15 | 313 | 6.41e-76 | 236 |
| Msa0134440 | MtrunA17_Chr4g0039891 | 56.190 | 210 | 81 | 4 | 39 | 240 | 11 | 217 | 1.61e-71 | 229 |
| Msa0134440 | MtrunA17_Chr4g0071051 | 47.541 | 244 | 113 | 5 | 12 | 250 | 73 | 306 | 2.85e-69 | 222 |
| Msa0134440 | MtrunA17_Chr8g0379701 | 38.408 | 289 | 158 | 5 | 39 | 318 | 11 | 288 | 2.96e-57 | 190 |
| Msa0134440 | MtrunA17_Chr8g0392001 | 49.505 | 202 | 84 | 6 | 40 | 227 | 22 | 219 | 1.93e-52 | 176 |
| Msa0134440 | MtrunA17_Chr6g0485571 | 43.627 | 204 | 108 | 3 | 40 | 243 | 11 | 207 | 4.01e-52 | 175 |
| Msa0134440 | MtrunA17_Chr2g0330821 | 44.737 | 190 | 96 | 2 | 34 | 220 | 73 | 256 | 4.63e-51 | 172 |
| Msa0134440 | MtrunA17_Chr6g0467041 | 42.478 | 226 | 115 | 5 | 40 | 262 | 22 | 235 | 5.26e-50 | 169 |
| Msa0134440 | MtrunA17_Chr8g0378061 | 45.545 | 202 | 98 | 5 | 41 | 239 | 23 | 215 | 1.90e-48 | 169 |
| Msa0134440 | MtrunA17_Chr2g0284481 | 40.426 | 188 | 108 | 1 | 31 | 214 | 6 | 193 | 4.96e-42 | 149 |
| Msa0134440 | MtrunA17_Chr3g0134031 | 65.049 | 103 | 36 | 0 | 34 | 136 | 18 | 120 | 3.21e-41 | 147 |
| Msa0134440 | MtrunA17_Chr5g0441531 | 71.579 | 95 | 27 | 0 | 38 | 132 | 23 | 117 | 9.28e-41 | 143 |
| Msa0134440 | MtrunA17_Chr5g0397881 | 64.894 | 94 | 33 | 0 | 38 | 131 | 22 | 115 | 8.57e-38 | 138 |
| Msa0134440 | MtrunA17_Chr1g0203601 | 62.766 | 94 | 35 | 0 | 38 | 131 | 16 | 109 | 2.96e-37 | 135 |
| Msa0134440 | MtrunA17_Chr6g0472421 | 62.766 | 94 | 35 | 0 | 38 | 131 | 31 | 124 | 2.99e-37 | 136 |
| Msa0134440 | MtrunA17_Chr8g0375041 | 43.114 | 167 | 80 | 3 | 37 | 188 | 6 | 172 | 6.58e-37 | 133 |
| Msa0134440 | MtrunA17_Chr7g0257331 | 52.941 | 119 | 49 | 2 | 31 | 142 | 9 | 127 | 8.59e-36 | 129 |
| Msa0134440 | MtrunA17_Chr5g0402291 | 60.417 | 96 | 38 | 0 | 37 | 132 | 6 | 101 | 4.59e-35 | 129 |
| Msa0134440 | MtrunA17_Chr4g0047421 | 42.331 | 163 | 85 | 3 | 38 | 193 | 31 | 191 | 7.98e-33 | 120 |
| Msa0134440 | MtrunA17_Chr1g0179311 | 45.926 | 135 | 71 | 2 | 97 | 231 | 11 | 143 | 2.52e-31 | 120 |
| Msa0134440 | MtrunA17_Chr1g0179321 | 67.123 | 73 | 24 | 0 | 27 | 99 | 36 | 108 | 2.01e-28 | 106 |
| Msa0134440 | MtrunA17_Chr4g0023771 | 61.194 | 67 | 26 | 0 | 31 | 97 | 6 | 72 | 1.02e-20 | 85.9 |
| Msa0134440 | MtrunA17_Chr2g0330841 | 30.556 | 144 | 88 | 3 | 100 | 240 | 41 | 175 | 1.95e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134440 | AT3G22830.1 | 52.078 | 361 | 113 | 6 | 22 | 323 | 43 | 402 | 2.41e-119 | 350 |
| Msa0134440 | AT2G26150.1 | 43.252 | 326 | 146 | 9 | 27 | 324 | 31 | 345 | 1.42e-85 | 261 |
| Msa0134440 | AT2G26150.4 | 43.252 | 326 | 146 | 9 | 27 | 324 | 31 | 345 | 1.42e-85 | 261 |
| Msa0134440 | AT3G51910.1 | 57.820 | 211 | 74 | 3 | 31 | 240 | 20 | 216 | 1.98e-81 | 248 |
| Msa0134440 | AT4G17750.1 | 53.012 | 249 | 91 | 6 | 16 | 240 | 22 | 268 | 1.86e-77 | 245 |
| Msa0134440 | AT5G16820.1 | 58.065 | 217 | 82 | 3 | 36 | 244 | 23 | 238 | 8.86e-77 | 243 |
| Msa0134440 | AT5G16820.2 | 58.065 | 217 | 82 | 3 | 36 | 244 | 23 | 238 | 8.86e-77 | 243 |
| Msa0134440 | AT1G32330.2 | 53.333 | 240 | 95 | 4 | 16 | 239 | 11 | 249 | 8.45e-76 | 241 |
| Msa0134440 | AT1G32330.1 | 53.333 | 240 | 95 | 4 | 16 | 239 | 11 | 249 | 1.01e-75 | 241 |
| Msa0134440 | AT5G43840.1 | 57.732 | 194 | 69 | 1 | 27 | 220 | 6 | 186 | 3.22e-75 | 233 |
| Msa0134440 | AT3G63350.1 | 51.339 | 224 | 90 | 3 | 18 | 233 | 6 | 218 | 3.79e-73 | 228 |
| Msa0134440 | AT3G02990.1 | 56.132 | 212 | 86 | 2 | 39 | 244 | 22 | 232 | 8.17e-73 | 233 |
| Msa0134440 | AT5G03720.2 | 41.455 | 275 | 160 | 1 | 14 | 288 | 29 | 302 | 1.39e-64 | 209 |
| Msa0134440 | AT5G03720.1 | 41.455 | 275 | 160 | 1 | 14 | 288 | 29 | 302 | 1.39e-64 | 209 |
| Msa0134440 | AT1G67970.1 | 48.372 | 215 | 102 | 5 | 40 | 248 | 19 | 230 | 8.89e-58 | 191 |
| Msa0134440 | AT3G24520.1 | 44.059 | 202 | 91 | 3 | 40 | 241 | 17 | 196 | 7.15e-51 | 172 |
| Msa0134440 | AT4G13980.1 | 43.842 | 203 | 101 | 3 | 41 | 239 | 24 | 217 | 1.00e-49 | 172 |
| Msa0134440 | AT5G54070.1 | 40.708 | 226 | 122 | 4 | 33 | 254 | 63 | 280 | 6.30e-48 | 164 |
| Msa0134440 | AT2G41690.1 | 39.216 | 204 | 107 | 4 | 13 | 209 | 23 | 216 | 2.39e-41 | 144 |
| Msa0134440 | AT4G18880.1 | 44.792 | 192 | 102 | 2 | 32 | 220 | 7 | 197 | 6.28e-41 | 147 |
| Msa0134440 | AT5G45710.3 | 42.640 | 197 | 108 | 2 | 39 | 232 | 12 | 206 | 8.67e-41 | 145 |
| Msa0134440 | AT5G45710.1 | 42.640 | 197 | 108 | 2 | 39 | 232 | 12 | 206 | 8.67e-41 | 145 |
| Msa0134440 | AT1G46264.1 | 64.423 | 104 | 37 | 0 | 31 | 134 | 25 | 128 | 9.07e-41 | 145 |
| Msa0134440 | AT2G26150.3 | 50.345 | 145 | 68 | 3 | 100 | 241 | 49 | 192 | 1.47e-38 | 138 |
| Msa0134440 | AT2G26150.2 | 50.345 | 145 | 68 | 3 | 100 | 241 | 49 | 192 | 1.47e-38 | 138 |
| Msa0134440 | AT4G11660.1 | 60.825 | 97 | 38 | 0 | 38 | 134 | 57 | 153 | 8.12e-38 | 139 |
| Msa0134440 | AT4G36990.1 | 54.464 | 112 | 47 | 1 | 38 | 149 | 12 | 119 | 4.48e-36 | 132 |
| Msa0134440 | AT5G62020.1 | 61.702 | 94 | 36 | 0 | 38 | 131 | 21 | 114 | 1.33e-35 | 131 |
| Msa0134440 | AT4G18870.1 | 37.097 | 124 | 75 | 1 | 29 | 149 | 135 | 258 | 6.87e-21 | 91.3 |
| Msa0134440 | AT4G18870.1 | 48.315 | 89 | 41 | 2 | 41 | 127 | 14 | 99 | 1.07e-19 | 87.8 |
| Msa0134440 | AT4G19630.1 | 39.623 | 106 | 52 | 4 | 36 | 131 | 7 | 110 | 1.57e-13 | 67.0 |
| Msa0134440 | AT1G77570.1 | 37.778 | 90 | 53 | 2 | 41 | 127 | 27 | 116 | 5.07e-12 | 63.2 |
Find 68 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATCAAAGCCTCCTATTT+AGG | 0.202422 | 1_3:+65945424 | None:intergenic |
| ACTAACTGTTGCAAGAAATT+AGG | 0.251206 | 1_3:+65945757 | None:intergenic |
| GGAACAATAGCTTTGTTGTT+TGG | 0.274853 | 1_3:-65946894 | Msa0134440:CDS |
| TAAATTGTAGGGGTTTAAAA+AGG | 0.303820 | 1_3:-65946109 | Msa0134440:intron |
| TTCAAGTTGATTAATTTGAT+TGG | 0.327468 | 1_3:+65945564 | None:intergenic |
| GTTGATGCAGATGTTGAATT+AGG | 0.327469 | 1_3:-65945652 | Msa0134440:CDS |
| GAACAATAGCTTTGTTGTTT+GGG | 0.327590 | 1_3:-65946893 | Msa0134440:CDS |
| TAAGAGATACTGAAGTGTTT+TGG | 0.339566 | 1_3:-65945540 | Msa0134440:CDS |
| CCACAAATCATATAGTTTCA+TGG | 0.352549 | 1_3:-65946924 | Msa0134440:CDS |
| TGCCTCTAGTCCTCCTAAAT+AGG | 0.370362 | 1_3:-65945437 | None:intergenic |
| ATTAAGTTGCCGGACAAAAC+TGG | 0.370804 | 1_3:+65946813 | None:intergenic |
| CTTGTCTGTCGCGCCTCAAC+CGG | 0.383841 | 1_3:+65945920 | None:intergenic |
| TTGTTGTGCTTGAAGAATCT+AGG | 0.383883 | 1_3:+65946841 | None:intergenic |
| CATATAGTTTCATGGAGTAC+TGG | 0.392040 | 1_3:-65946916 | Msa0134440:CDS |
| TGTGTTGAGCTGGGAAGGTT+TGG | 0.393869 | 1_3:-65945964 | Msa0134440:CDS |
| AAAACAGATGATGAATTTCA+TGG | 0.398561 | 1_3:-65945797 | Msa0134440:CDS |
| GGAATGGAGAAAAGAGTTAG+AGG | 0.408095 | 1_3:-65945725 | Msa0134440:CDS |
| TTCTTCTAATGTTCTTCAAA+AGG | 0.412252 | 1_3:+65946031 | None:intergenic |
| CCATGAAACTATATGATTTG+TGG | 0.413159 | 1_3:+65946924 | None:intergenic |
| AGGGAAGGACTTCATGAAAA+TGG | 0.418874 | 1_3:-65946994 | Msa0134440:CDS |
| TCACATAGGTATTAAGTTGC+CGG | 0.435323 | 1_3:+65946803 | None:intergenic |
| TGAAGTCCTTCCCTTGGTTG+AGG | 0.441996 | 1_3:+65947003 | None:intergenic |
| ACATCTGCATCAACATTACT+AGG | 0.447700 | 1_3:+65945661 | None:intergenic |
| TATTGAAGATGTTGATGTAT+TGG | 0.457804 | 1_3:-65945479 | Msa0134440:CDS |
| GCTAATGAGATGTTTCTAAG+AGG | 0.461550 | 1_3:-65946063 | Msa0134440:CDS |
| GGGATGAAGGAGGAGTTTGT+TGG | 0.463474 | 1_3:-65947057 | Msa0134440:CDS |
| ATCTTGAAGCAATGGAAAGA+AGG | 0.466935 | 1_3:-65945843 | Msa0134440:CDS |
| GAATCGAAGTGGACCGGTTG+AGG | 0.470687 | 1_3:-65945933 | Msa0134440:CDS |
| ATGAATATGAATCTTCATCA+TGG | 0.483530 | 1_3:-65947081 | Msa0134440:CDS |
| CGTCATGTGTTGAGCTGGGA+AGG | 0.490133 | 1_3:-65945969 | Msa0134440:CDS |
| GCGCGACAGACAAGTTCTAA+TGG | 0.493467 | 1_3:-65945911 | Msa0134440:CDS |
| AAAGGTTGATGCAGATAGGT+GGG | 0.494489 | 1_3:-65946091 | Msa0134440:CDS |
| AGACCCGTCATGTGTTGAGC+TGG | 0.495058 | 1_3:-65945974 | Msa0134440:CDS |
| ATGAAGGAGGAGTTTGTTGG+AGG | 0.495698 | 1_3:-65947054 | Msa0134440:CDS |
| AGTTAGTTCAGCAGAAGGAA+TGG | 0.496467 | 1_3:-65945741 | Msa0134440:CDS |
| AGGTTCACCAACCACAGAAA+AGG | 0.504219 | 1_3:+65947023 | None:intergenic |
| AGGGAGAAGAATAATAGAAA+AGG | 0.505225 | 1_3:+65946861 | None:intergenic |
| TGTTGTGCTTGAAGAATCTA+GGG | 0.511168 | 1_3:+65946842 | None:intergenic |
| TCTTCATCATGGTGGGATGA+AGG | 0.511768 | 1_3:-65947070 | Msa0134440:CDS |
| ATCAAAGCCTCCTATTTAGG+AGG | 0.518160 | 1_3:+65945427 | None:intergenic |
| ACAAGTTCTAATGGTTGAGT+TGG | 0.523658 | 1_3:-65945902 | Msa0134440:CDS |
| TGGCAAGATTTGTTTAAGGA+GGG | 0.525419 | 1_3:-65945520 | Msa0134440:CDS |
| TTGGCAAGATTTGTTTAAGG+AGG | 0.525683 | 1_3:-65945521 | Msa0134440:CDS |
| TAGAACTCATCTTGAAGCAA+TGG | 0.536822 | 1_3:-65945851 | Msa0134440:CDS |
| AAAAGGTTGATGCAGATAGG+TGG | 0.546223 | 1_3:-65946092 | Msa0134440:CDS |
| CTGGGAAGGTTTGGAGTAGA+CGG | 0.546851 | 1_3:-65945955 | Msa0134440:CDS |
| TTCCCAGCTCAACACATGAC+GGG | 0.552361 | 1_3:+65945971 | None:intergenic |
| GATGATGAATTTCATGGCAA+GGG | 0.556515 | 1_3:-65945791 | Msa0134440:CDS |
| ATATAGTTTCATGGAGTACT+GGG | 0.559738 | 1_3:-65946915 | Msa0134440:CDS |
| GACCCGTCATGTGTTGAGCT+GGG | 0.564277 | 1_3:-65945973 | Msa0134440:CDS |
| AGATGATGAATTTCATGGCA+AGG | 0.575521 | 1_3:-65945792 | Msa0134440:CDS |
| CTTCCCAGCTCAACACATGA+CGG | 0.580827 | 1_3:+65945970 | None:intergenic |
| CTCCTATTTAGGAGGACTAG+AGG | 0.581849 | 1_3:+65945435 | None:intergenic |
| GCAACAGTTAGTTCAGCAGA+AGG | 0.585939 | 1_3:-65945746 | Msa0134440:CDS |
| TGAACAACATCAAGATGTTG+AGG | 0.592174 | 1_3:-65945593 | Msa0134440:CDS |
| AGAATAATAGAAAAGGCTTG+AGG | 0.598445 | 1_3:+65946868 | None:intergenic |
| GATGTATTGGCTGAGCAACT+TGG | 0.605475 | 1_3:-65945466 | Msa0134440:CDS |
| AATATGAATCTTCATCATGG+TGG | 0.612258 | 1_3:-65947078 | Msa0134440:CDS |
| TAGACGGAATCGAAGTGGAC+CGG | 0.614296 | 1_3:-65945939 | Msa0134440:CDS |
| GAAACTATATGATTTGTGGA+AGG | 0.623337 | 1_3:+65946928 | None:intergenic |
| TGGAGTAGACGGAATCGAAG+TGG | 0.627202 | 1_3:-65945944 | Msa0134440:CDS |
| AGAAGGAGAACTATTGACGA+AGG | 0.628728 | 1_3:-65945685 | Msa0134440:CDS |
| GAAGGAGAACTATTGACGAA+GGG | 0.637249 | 1_3:-65945684 | Msa0134440:CDS |
| ATATGAATCTTCATCATGGT+GGG | 0.643772 | 1_3:-65947077 | Msa0134440:CDS |
| TCATCATGGTGGGATGAAGG+AGG | 0.650270 | 1_3:-65947067 | Msa0134440:CDS |
| GGTGAACCTCAACCAAGGGA+AGG | 0.659511 | 1_3:-65947009 | Msa0134440:CDS |
| TGGTTGGTGAACCTCAACCA+AGG | 0.664718 | 1_3:-65947014 | Msa0134440:CDS |
| GGTTGGTGAACCTCAACCAA+GGG | 0.679182 | 1_3:-65947013 | Msa0134440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTGAAATTAAATTGTA+GGG | - | chr1_3:65946399-65946418 | Msa0134440:intron | 10.0% |
| !!! | AAATTTGAAATTAAATTGTA+GGG | - | chr1_3:65946399-65946418 | Msa0134440:intron | 10.0% |
| !!! | AACATTTTTGTTTCATTATA+TGG | - | chr1_3:65945872-65945891 | Msa0134440:CDS | 15.0% |
| !!! | GAAATTTGAAATTAAATTGT+AGG | - | chr1_3:65946398-65946417 | Msa0134440:intron | 15.0% |
| !!! | AATTTGAAATTAAATTGTAG+GGG | - | chr1_3:65946400-65946419 | Msa0134440:intron | 15.0% |
| !!! | AACATTTTTGTTTCATTATA+TGG | - | chr1_3:65945872-65945891 | Msa0134440:CDS | 15.0% |
| !!! | GAAATTTGAAATTAAATTGT+AGG | - | chr1_3:65946398-65946417 | Msa0134440:intron | 15.0% |
| !!! | AATTTGAAATTAAATTGTAG+GGG | - | chr1_3:65946400-65946419 | Msa0134440:intron | 15.0% |
| !! | ATGGAATAATGTAGTAATAA+AGG | - | chr1_3:65945891-65945910 | Msa0134440:CDS | 20.0% |
| !!! | TAGTAATAAAGGCTATTTTT+GGG | - | chr1_3:65945902-65945921 | Msa0134440:CDS | 20.0% |
| !!! | TTTGACTTTTCTCTATATTA+GGG | + | chr1_3:65946019-65946038 | None:intergenic | 20.0% |
| !!! | TTTTGACTTTTCTCTATATT+AGG | + | chr1_3:65946020-65946039 | None:intergenic | 20.0% |
| !! | AAACAAACACTAATTAACAT+TGG | + | chr1_3:65946332-65946351 | None:intergenic | 20.0% |
| !!! | AAATTTTTTCTAAGAAGAGA+AGG | - | chr1_3:65946817-65946836 | Msa0134440:CDS | 20.0% |
| !!! | TTCAAGTTGATTAATTTGAT+TGG | + | chr1_3:65946958-65946977 | None:intergenic | 20.0% |
| !! | ATGGAATAATGTAGTAATAA+AGG | - | chr1_3:65945891-65945910 | Msa0134440:CDS | 20.0% |
| !!! | TAGTAATAAAGGCTATTTTT+GGG | - | chr1_3:65945902-65945921 | Msa0134440:CDS | 20.0% |
| !!! | TTTGACTTTTCTCTATATTA+GGG | + | chr1_3:65946019-65946038 | None:intergenic | 20.0% |
| !!! | TTTTGACTTTTCTCTATATT+AGG | + | chr1_3:65946020-65946039 | None:intergenic | 20.0% |
| !! | AAACAAACACTAATTAACAT+TGG | + | chr1_3:65946332-65946351 | None:intergenic | 20.0% |
| !!! | AAATTTTTTCTAAGAAGAGA+AGG | - | chr1_3:65946817-65946836 | Msa0134440:CDS | 20.0% |
| !!! | TTCAAGTTGATTAATTTGAT+TGG | + | chr1_3:65946958-65946977 | None:intergenic | 20.0% |
| ! | ATGAATATGAATCTTCATCA+TGG | - | chr1_3:65945438-65945457 | Msa0134440:CDS | 25.0% |
| !!! | CTATATCATATGTTTTTGTG+AGG | + | chr1_3:65945563-65945582 | None:intergenic | 25.0% |
| ! | TTAAATACTACTACTCACAT+AGG | + | chr1_3:65945733-65945752 | None:intergenic | 25.0% |
| ! | TATCTCATCAGATTAAACAA+AGG | + | chr1_3:65945803-65945822 | None:intergenic | 25.0% |
| ! | TTGTTTAATCTGATGAGATA+AGG | - | chr1_3:65945803-65945822 | Msa0134440:CDS | 25.0% |
| !! | ATTGTTTCTTATGATGAGAA+GGG | + | chr1_3:65945835-65945854 | None:intergenic | 25.0% |
| !! | TATTGTTTCTTATGATGAGA+AGG | + | chr1_3:65945836-65945855 | None:intergenic | 25.0% |
| !!! | GTAGTAATAAAGGCTATTTT+TGG | - | chr1_3:65945901-65945920 | Msa0134440:CDS | 25.0% |
| !!! | ATTGTGTGAGTTATTTTTCT+TGG | - | chr1_3:65945980-65945999 | Msa0134440:CDS | 25.0% |
| ! | AGAGAAAAGTCAAAATGTAT+TGG | - | chr1_3:65946025-65946044 | Msa0134440:CDS | 25.0% |
| ! | AAAAGTCAAAATGTATTGGA+CGG | - | chr1_3:65946029-65946048 | Msa0134440:CDS | 25.0% |
| !!! | TAGTGTTTGTTTTCATTGAA+TGG | - | chr1_3:65946340-65946359 | Msa0134440:intron | 25.0% |
| !! | GTTTTCATTGAATGGAATTA+TGG | - | chr1_3:65946348-65946367 | Msa0134440:intron | 25.0% |
| !!! | GCATTTTGATTTGAAAATGA+AGG | - | chr1_3:65946374-65946393 | Msa0134440:intron | 25.0% |
| ! | TAAATTGTAGGGGTTTAAAA+AGG | - | chr1_3:65946410-65946429 | Msa0134440:intron | 25.0% |
| ! | TTCTTCTAATGTTCTTCAAA+AGG | + | chr1_3:65946491-65946510 | None:intergenic | 25.0% |
| ! | AAAACAGATGATGAATTTCA+TGG | - | chr1_3:65946722-65946741 | Msa0134440:intron | 25.0% |
| ! | TATTGAAGATGTTGATGTAT+TGG | - | chr1_3:65947040-65947059 | Msa0134440:CDS | 25.0% |
| ! | ATGAATATGAATCTTCATCA+TGG | - | chr1_3:65945438-65945457 | Msa0134440:CDS | 25.0% |
| !!! | CTATATCATATGTTTTTGTG+AGG | + | chr1_3:65945563-65945582 | None:intergenic | 25.0% |
| ! | TTAAATACTACTACTCACAT+AGG | + | chr1_3:65945733-65945752 | None:intergenic | 25.0% |
| ! | TATCTCATCAGATTAAACAA+AGG | + | chr1_3:65945803-65945822 | None:intergenic | 25.0% |
| ! | TTGTTTAATCTGATGAGATA+AGG | - | chr1_3:65945803-65945822 | Msa0134440:CDS | 25.0% |
| !! | ATTGTTTCTTATGATGAGAA+GGG | + | chr1_3:65945835-65945854 | None:intergenic | 25.0% |
| !! | TATTGTTTCTTATGATGAGA+AGG | + | chr1_3:65945836-65945855 | None:intergenic | 25.0% |
| !!! | GTAGTAATAAAGGCTATTTT+TGG | - | chr1_3:65945901-65945920 | Msa0134440:CDS | 25.0% |
| !!! | ATTGTGTGAGTTATTTTTCT+TGG | - | chr1_3:65945980-65945999 | Msa0134440:CDS | 25.0% |
| ! | AGAGAAAAGTCAAAATGTAT+TGG | - | chr1_3:65946025-65946044 | Msa0134440:CDS | 25.0% |
| ! | AAAAGTCAAAATGTATTGGA+CGG | - | chr1_3:65946029-65946048 | Msa0134440:CDS | 25.0% |
| !!! | TAGTGTTTGTTTTCATTGAA+TGG | - | chr1_3:65946340-65946359 | Msa0134440:intron | 25.0% |
| !! | GTTTTCATTGAATGGAATTA+TGG | - | chr1_3:65946348-65946367 | Msa0134440:intron | 25.0% |
| !!! | GCATTTTGATTTGAAAATGA+AGG | - | chr1_3:65946374-65946393 | Msa0134440:intron | 25.0% |
| ! | TAAATTGTAGGGGTTTAAAA+AGG | - | chr1_3:65946410-65946429 | Msa0134440:intron | 25.0% |
| ! | TTCTTCTAATGTTCTTCAAA+AGG | + | chr1_3:65946491-65946510 | None:intergenic | 25.0% |
| ! | AAAACAGATGATGAATTTCA+TGG | - | chr1_3:65946722-65946741 | Msa0134440:intron | 25.0% |
| ! | TATTGAAGATGTTGATGTAT+TGG | - | chr1_3:65947040-65947059 | Msa0134440:CDS | 25.0% |
| AATATGAATCTTCATCATGG+TGG | - | chr1_3:65945441-65945460 | Msa0134440:CDS | 30.0% | |
| ATATGAATCTTCATCATGGT+GGG | - | chr1_3:65945442-65945461 | Msa0134440:CDS | 30.0% | |
| !! | TCATATGTTTTTGTGAGGAA+TGG | + | chr1_3:65945558-65945577 | None:intergenic | 30.0% |
| ! | GAAACTATATGATTTGTGGA+AGG | + | chr1_3:65945594-65945613 | None:intergenic | 30.0% |
| CCATGAAACTATATGATTTG+TGG | + | chr1_3:65945598-65945617 | None:intergenic | 30.0% | |
| CCACAAATCATATAGTTTCA+TGG | - | chr1_3:65945595-65945614 | Msa0134440:CDS | 30.0% | |
| ! | ATATAGTTTCATGGAGTACT+GGG | - | chr1_3:65945604-65945623 | Msa0134440:CDS | 30.0% |
| !! | GAACAATAGCTTTGTTGTTT+GGG | - | chr1_3:65945626-65945645 | Msa0134440:CDS | 30.0% |
| AGAATAATAGAAAAGGCTTG+AGG | + | chr1_3:65945654-65945673 | None:intergenic | 30.0% | |
| AGGGAGAAGAATAATAGAAA+AGG | + | chr1_3:65945661-65945680 | None:intergenic | 30.0% | |
| ! | CTTTGGAAAGAAATGAATGA+AGG | - | chr1_3:65945941-65945960 | Msa0134440:CDS | 30.0% |
| AAAGTCAAAATGTATTGGAC+GGG | - | chr1_3:65946030-65946049 | Msa0134440:CDS | 30.0% | |
| AAACACGACATTGATACATT+TGG | - | chr1_3:65946225-65946244 | Msa0134440:intron | 30.0% | |
| !! | TTAAAAAGGTTGATGCAGAT+AGG | - | chr1_3:65946424-65946443 | Msa0134440:intron | 30.0% |
| ACTAACTGTTGCAAGAAATT+AGG | + | chr1_3:65946765-65946784 | None:intergenic | 30.0% | |
| !! | TAAGAGATACTGAAGTGTTT+TGG | - | chr1_3:65946979-65946998 | Msa0134440:CDS | 30.0% |
| !! | GTTTTGGCAAGATTTGTTTA+AGG | - | chr1_3:65946995-65947014 | Msa0134440:CDS | 30.0% |
| AATATGAATCTTCATCATGG+TGG | - | chr1_3:65945441-65945460 | Msa0134440:CDS | 30.0% | |
| ATATGAATCTTCATCATGGT+GGG | - | chr1_3:65945442-65945461 | Msa0134440:CDS | 30.0% | |
| !! | TCATATGTTTTTGTGAGGAA+TGG | + | chr1_3:65945558-65945577 | None:intergenic | 30.0% |
| ! | GAAACTATATGATTTGTGGA+AGG | + | chr1_3:65945594-65945613 | None:intergenic | 30.0% |
| CCATGAAACTATATGATTTG+TGG | + | chr1_3:65945598-65945617 | None:intergenic | 30.0% | |
| CCACAAATCATATAGTTTCA+TGG | - | chr1_3:65945595-65945614 | Msa0134440:CDS | 30.0% | |
| ! | ATATAGTTTCATGGAGTACT+GGG | - | chr1_3:65945604-65945623 | Msa0134440:CDS | 30.0% |
| !! | GAACAATAGCTTTGTTGTTT+GGG | - | chr1_3:65945626-65945645 | Msa0134440:CDS | 30.0% |
| AGAATAATAGAAAAGGCTTG+AGG | + | chr1_3:65945654-65945673 | None:intergenic | 30.0% | |
| AGGGAGAAGAATAATAGAAA+AGG | + | chr1_3:65945661-65945680 | None:intergenic | 30.0% | |
| ! | CTTTGGAAAGAAATGAATGA+AGG | - | chr1_3:65945941-65945960 | Msa0134440:CDS | 30.0% |
| AAAGTCAAAATGTATTGGAC+GGG | - | chr1_3:65946030-65946049 | Msa0134440:CDS | 30.0% | |
| AAACACGACATTGATACATT+TGG | - | chr1_3:65946225-65946244 | Msa0134440:intron | 30.0% | |
| !! | TTAAAAAGGTTGATGCAGAT+AGG | - | chr1_3:65946424-65946443 | Msa0134440:intron | 30.0% |
| ACTAACTGTTGCAAGAAATT+AGG | + | chr1_3:65946765-65946784 | None:intergenic | 30.0% | |
| !! | TAAGAGATACTGAAGTGTTT+TGG | - | chr1_3:65946979-65946998 | Msa0134440:CDS | 30.0% |
| !! | GTTTTGGCAAGATTTGTTTA+AGG | - | chr1_3:65946995-65947014 | Msa0134440:CDS | 30.0% |
| !! | TATGTTTTTGTGAGGAATGG+TGG | + | chr1_3:65945555-65945574 | None:intergenic | 35.0% |
| CATATAGTTTCATGGAGTAC+TGG | - | chr1_3:65945603-65945622 | Msa0134440:CDS | 35.0% | |
| !! | GGAACAATAGCTTTGTTGTT+TGG | - | chr1_3:65945625-65945644 | Msa0134440:CDS | 35.0% |
| TGTTGTGCTTGAAGAATCTA+GGG | + | chr1_3:65945680-65945699 | None:intergenic | 35.0% | |
| TTGTTGTGCTTGAAGAATCT+AGG | + | chr1_3:65945681-65945700 | None:intergenic | 35.0% | |
| !! | ACAATTTCTCCAGTTTTGTC+CGG | - | chr1_3:65945697-65945716 | Msa0134440:CDS | 35.0% |
| ! | TCACATAGGTATTAAGTTGC+CGG | + | chr1_3:65945719-65945738 | None:intergenic | 35.0% |
| !!! | AAAGGCTATTTTTGGGAGTT+AGG | - | chr1_3:65945909-65945928 | Msa0134440:CDS | 35.0% |
| GAGTTAGGAATGAATGACTT+TGG | - | chr1_3:65945924-65945943 | Msa0134440:CDS | 35.0% | |
| AAGTCAAAATGTATTGGACG+GGG | - | chr1_3:65946031-65946050 | Msa0134440:CDS | 35.0% | |
| GTAGATAATATGACATCACG+AGG | - | chr1_3:65946146-65946165 | Msa0134440:intron | 35.0% | |
| TAACATTGGCATAGACATAG+AGG | + | chr1_3:65946318-65946337 | None:intergenic | 35.0% | |
| ! | GCTAATGAGATGTTTCTAAG+AGG | - | chr1_3:65946456-65946475 | Msa0134440:intron | 35.0% |
| ! | ACAAGTTCTAATGGTTGAGT+TGG | - | chr1_3:65946617-65946636 | Msa0134440:intron | 35.0% |
| TAGAACTCATCTTGAAGCAA+TGG | - | chr1_3:65946668-65946687 | Msa0134440:intron | 35.0% | |
| ATCTTGAAGCAATGGAAAGA+AGG | - | chr1_3:65946676-65946695 | Msa0134440:intron | 35.0% | |
| AGATGATGAATTTCATGGCA+AGG | - | chr1_3:65946727-65946746 | Msa0134440:intron | 35.0% | |
| GATGATGAATTTCATGGCAA+GGG | - | chr1_3:65946728-65946747 | Msa0134440:intron | 35.0% | |
| ACATCTGCATCAACATTACT+AGG | + | chr1_3:65946861-65946880 | None:intergenic | 35.0% | |
| GTTGATGCAGATGTTGAATT+AGG | - | chr1_3:65946867-65946886 | Msa0134440:CDS | 35.0% | |
| TGAACAACATCAAGATGTTG+AGG | - | chr1_3:65946926-65946945 | Msa0134440:CDS | 35.0% | |
| ! | TTGGCAAGATTTGTTTAAGG+AGG | - | chr1_3:65946998-65947017 | Msa0134440:CDS | 35.0% |
| ! | TGGCAAGATTTGTTTAAGGA+GGG | - | chr1_3:65946999-65947018 | Msa0134440:CDS | 35.0% |
| !! | TATGTTTTTGTGAGGAATGG+TGG | + | chr1_3:65945555-65945574 | None:intergenic | 35.0% |
| CATATAGTTTCATGGAGTAC+TGG | - | chr1_3:65945603-65945622 | Msa0134440:CDS | 35.0% | |
| !! | GGAACAATAGCTTTGTTGTT+TGG | - | chr1_3:65945625-65945644 | Msa0134440:CDS | 35.0% |
| TGTTGTGCTTGAAGAATCTA+GGG | + | chr1_3:65945680-65945699 | None:intergenic | 35.0% | |
| TTGTTGTGCTTGAAGAATCT+AGG | + | chr1_3:65945681-65945700 | None:intergenic | 35.0% | |
| !! | ACAATTTCTCCAGTTTTGTC+CGG | - | chr1_3:65945697-65945716 | Msa0134440:CDS | 35.0% |
| ! | TCACATAGGTATTAAGTTGC+CGG | + | chr1_3:65945719-65945738 | None:intergenic | 35.0% |
| !!! | AAAGGCTATTTTTGGGAGTT+AGG | - | chr1_3:65945909-65945928 | Msa0134440:CDS | 35.0% |
| GAGTTAGGAATGAATGACTT+TGG | - | chr1_3:65945924-65945943 | Msa0134440:CDS | 35.0% | |
| AAGTCAAAATGTATTGGACG+GGG | - | chr1_3:65946031-65946050 | Msa0134440:CDS | 35.0% | |
| GTAGATAATATGACATCACG+AGG | - | chr1_3:65946146-65946165 | Msa0134440:intron | 35.0% | |
| TAACATTGGCATAGACATAG+AGG | + | chr1_3:65946318-65946337 | None:intergenic | 35.0% | |
| ! | GCTAATGAGATGTTTCTAAG+AGG | - | chr1_3:65946456-65946475 | Msa0134440:intron | 35.0% |
| ! | ACAAGTTCTAATGGTTGAGT+TGG | - | chr1_3:65946617-65946636 | Msa0134440:intron | 35.0% |
| TAGAACTCATCTTGAAGCAA+TGG | - | chr1_3:65946668-65946687 | Msa0134440:intron | 35.0% | |
| ATCTTGAAGCAATGGAAAGA+AGG | - | chr1_3:65946676-65946695 | Msa0134440:intron | 35.0% | |
| AGATGATGAATTTCATGGCA+AGG | - | chr1_3:65946727-65946746 | Msa0134440:intron | 35.0% | |
| GATGATGAATTTCATGGCAA+GGG | - | chr1_3:65946728-65946747 | Msa0134440:intron | 35.0% | |
| ACATCTGCATCAACATTACT+AGG | + | chr1_3:65946861-65946880 | None:intergenic | 35.0% | |
| GTTGATGCAGATGTTGAATT+AGG | - | chr1_3:65946867-65946886 | Msa0134440:CDS | 35.0% | |
| TGAACAACATCAAGATGTTG+AGG | - | chr1_3:65946926-65946945 | Msa0134440:CDS | 35.0% | |
| ! | TTGGCAAGATTTGTTTAAGG+AGG | - | chr1_3:65946998-65947017 | Msa0134440:CDS | 35.0% |
| ! | TGGCAAGATTTGTTTAAGGA+GGG | - | chr1_3:65946999-65947018 | Msa0134440:CDS | 35.0% |
| ! | AGGAAGTTCTTCCTTTTCTG+TGG | - | chr1_3:65945485-65945504 | Msa0134440:CDS | 40.0% |
| ! | AGTTCTTCCTTTTCTGTGGT+TGG | - | chr1_3:65945489-65945508 | Msa0134440:CDS | 40.0% |
| ! | TTTTCATGAAGTCCTTCCCT+TGG | + | chr1_3:65945525-65945544 | None:intergenic | 40.0% |
| AGGGAAGGACTTCATGAAAA+TGG | - | chr1_3:65945525-65945544 | Msa0134440:CDS | 40.0% | |
| ! | ATTAAGTTGCCGGACAAAAC+TGG | + | chr1_3:65945709-65945728 | None:intergenic | 40.0% |
| !! | AAAAGGTTGATGCAGATAGG+TGG | - | chr1_3:65946427-65946446 | Msa0134440:intron | 40.0% |
| !! | AAAGGTTGATGCAGATAGGT+GGG | - | chr1_3:65946428-65946447 | Msa0134440:intron | 40.0% |
| AGTTAGTTCAGCAGAAGGAA+TGG | - | chr1_3:65946778-65946797 | Msa0134440:intron | 40.0% | |
| GGAATGGAGAAAAGAGTTAG+AGG | - | chr1_3:65946794-65946813 | Msa0134440:intron | 40.0% | |
| AGAAGGAGAACTATTGACGA+AGG | - | chr1_3:65946834-65946853 | Msa0134440:CDS | 40.0% | |
| GAAGGAGAACTATTGACGAA+GGG | - | chr1_3:65946835-65946854 | Msa0134440:CDS | 40.0% | |
| ! | AGGAAGTTCTTCCTTTTCTG+TGG | - | chr1_3:65945485-65945504 | Msa0134440:CDS | 40.0% |
| ! | AGTTCTTCCTTTTCTGTGGT+TGG | - | chr1_3:65945489-65945508 | Msa0134440:CDS | 40.0% |
| ! | TTTTCATGAAGTCCTTCCCT+TGG | + | chr1_3:65945525-65945544 | None:intergenic | 40.0% |
| AGGGAAGGACTTCATGAAAA+TGG | - | chr1_3:65945525-65945544 | Msa0134440:CDS | 40.0% | |
| ! | ATTAAGTTGCCGGACAAAAC+TGG | + | chr1_3:65945709-65945728 | None:intergenic | 40.0% |
| !! | AAAAGGTTGATGCAGATAGG+TGG | - | chr1_3:65946427-65946446 | Msa0134440:intron | 40.0% |
| !! | AAAGGTTGATGCAGATAGGT+GGG | - | chr1_3:65946428-65946447 | Msa0134440:intron | 40.0% |
| AGTTAGTTCAGCAGAAGGAA+TGG | - | chr1_3:65946778-65946797 | Msa0134440:intron | 40.0% | |
| GGAATGGAGAAAAGAGTTAG+AGG | - | chr1_3:65946794-65946813 | Msa0134440:intron | 40.0% | |
| AGAAGGAGAACTATTGACGA+AGG | - | chr1_3:65946834-65946853 | Msa0134440:CDS | 40.0% | |
| GAAGGAGAACTATTGACGAA+GGG | - | chr1_3:65946835-65946854 | Msa0134440:CDS | 40.0% | |
| ! | TCTTCATCATGGTGGGATGA+AGG | - | chr1_3:65945449-65945468 | Msa0134440:CDS | 45.0% |
| !! | ATGAAGGAGGAGTTTGTTGG+AGG | - | chr1_3:65945465-65945484 | Msa0134440:CDS | 45.0% |
| AGGTTCACCAACCACAGAAA+AGG | + | chr1_3:65945499-65945518 | None:intergenic | 45.0% | |
| ! | GTTTTTGTGAGGAATGGTGG+AGG | + | chr1_3:65945552-65945571 | None:intergenic | 45.0% |
| GCAACAGTTAGTTCAGCAGA+AGG | - | chr1_3:65946773-65946792 | Msa0134440:intron | 45.0% | |
| !! | GATGTATTGGCTGAGCAACT+TGG | - | chr1_3:65947053-65947072 | Msa0134440:CDS | 45.0% |
| ! | TCTTCATCATGGTGGGATGA+AGG | - | chr1_3:65945449-65945468 | Msa0134440:CDS | 45.0% |
| !! | ATGAAGGAGGAGTTTGTTGG+AGG | - | chr1_3:65945465-65945484 | Msa0134440:CDS | 45.0% |
| AGGTTCACCAACCACAGAAA+AGG | + | chr1_3:65945499-65945518 | None:intergenic | 45.0% | |
| ! | GTTTTTGTGAGGAATGGTGG+AGG | + | chr1_3:65945552-65945571 | None:intergenic | 45.0% |
| GCAACAGTTAGTTCAGCAGA+AGG | - | chr1_3:65946773-65946792 | Msa0134440:intron | 45.0% | |
| !! | GATGTATTGGCTGAGCAACT+TGG | - | chr1_3:65947053-65947072 | Msa0134440:CDS | 45.0% |
| ! | TCATCATGGTGGGATGAAGG+AGG | - | chr1_3:65945452-65945471 | Msa0134440:CDS | 50.0% |
| GGGATGAAGGAGGAGTTTGT+TGG | - | chr1_3:65945462-65945481 | Msa0134440:CDS | 50.0% | |
| !! | TGGTTGGTGAACCTCAACCA+AGG | - | chr1_3:65945505-65945524 | Msa0134440:CDS | 50.0% |
| !! | GGTTGGTGAACCTCAACCAA+GGG | - | chr1_3:65945506-65945525 | Msa0134440:CDS | 50.0% |
| TGAAGTCCTTCCCTTGGTTG+AGG | + | chr1_3:65945519-65945538 | None:intergenic | 50.0% | |
| TTCCCAGCTCAACACATGAC+GGG | + | chr1_3:65946551-65946570 | None:intergenic | 50.0% | |
| CTTCCCAGCTCAACACATGA+CGG | + | chr1_3:65946552-65946571 | None:intergenic | 50.0% | |
| TGTGTTGAGCTGGGAAGGTT+TGG | - | chr1_3:65946555-65946574 | Msa0134440:intron | 50.0% | |
| ! | CTGGGAAGGTTTGGAGTAGA+CGG | - | chr1_3:65946564-65946583 | Msa0134440:intron | 50.0% |
| TGGAGTAGACGGAATCGAAG+TGG | - | chr1_3:65946575-65946594 | Msa0134440:intron | 50.0% | |
| TAGACGGAATCGAAGTGGAC+CGG | - | chr1_3:65946580-65946599 | Msa0134440:intron | 50.0% | |
| ! | GCGCGACAGACAAGTTCTAA+TGG | - | chr1_3:65946608-65946627 | Msa0134440:intron | 50.0% |
| ! | TCATCATGGTGGGATGAAGG+AGG | - | chr1_3:65945452-65945471 | Msa0134440:CDS | 50.0% |
| GGGATGAAGGAGGAGTTTGT+TGG | - | chr1_3:65945462-65945481 | Msa0134440:CDS | 50.0% | |
| !! | TGGTTGGTGAACCTCAACCA+AGG | - | chr1_3:65945505-65945524 | Msa0134440:CDS | 50.0% |
| !! | GGTTGGTGAACCTCAACCAA+GGG | - | chr1_3:65945506-65945525 | Msa0134440:CDS | 50.0% |
| TGAAGTCCTTCCCTTGGTTG+AGG | + | chr1_3:65945519-65945538 | None:intergenic | 50.0% | |
| TTCCCAGCTCAACACATGAC+GGG | + | chr1_3:65946551-65946570 | None:intergenic | 50.0% | |
| CTTCCCAGCTCAACACATGA+CGG | + | chr1_3:65946552-65946571 | None:intergenic | 50.0% | |
| TGTGTTGAGCTGGGAAGGTT+TGG | - | chr1_3:65946555-65946574 | Msa0134440:intron | 50.0% | |
| ! | CTGGGAAGGTTTGGAGTAGA+CGG | - | chr1_3:65946564-65946583 | Msa0134440:intron | 50.0% |
| TGGAGTAGACGGAATCGAAG+TGG | - | chr1_3:65946575-65946594 | Msa0134440:intron | 50.0% | |
| TAGACGGAATCGAAGTGGAC+CGG | - | chr1_3:65946580-65946599 | Msa0134440:intron | 50.0% | |
| ! | GCGCGACAGACAAGTTCTAA+TGG | - | chr1_3:65946608-65946627 | Msa0134440:intron | 50.0% |
| GGTGAACCTCAACCAAGGGA+AGG | - | chr1_3:65945510-65945529 | Msa0134440:CDS | 55.0% | |
| AGACCCGTCATGTGTTGAGC+TGG | - | chr1_3:65946545-65946564 | Msa0134440:intron | 55.0% | |
| GACCCGTCATGTGTTGAGCT+GGG | - | chr1_3:65946546-65946565 | Msa0134440:intron | 55.0% | |
| CGTCATGTGTTGAGCTGGGA+AGG | - | chr1_3:65946550-65946569 | Msa0134440:intron | 55.0% | |
| GAATCGAAGTGGACCGGTTG+AGG | - | chr1_3:65946586-65946605 | Msa0134440:intron | 55.0% | |
| GGTGAACCTCAACCAAGGGA+AGG | - | chr1_3:65945510-65945529 | Msa0134440:CDS | 55.0% | |
| AGACCCGTCATGTGTTGAGC+TGG | - | chr1_3:65946545-65946564 | Msa0134440:intron | 55.0% | |
| GACCCGTCATGTGTTGAGCT+GGG | - | chr1_3:65946546-65946565 | Msa0134440:intron | 55.0% | |
| CGTCATGTGTTGAGCTGGGA+AGG | - | chr1_3:65946550-65946569 | Msa0134440:intron | 55.0% | |
| GAATCGAAGTGGACCGGTTG+AGG | - | chr1_3:65946586-65946605 | Msa0134440:intron | 55.0% | |
| CTTGTCTGTCGCGCCTCAAC+CGG | + | chr1_3:65946602-65946621 | None:intergenic | 60.0% | |
| CTTGTCTGTCGCGCCTCAAC+CGG | + | chr1_3:65946602-65946621 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 65945438 | 65947103 | 65945438 | ID=Msa0134440;Name=Msa0134440 |
| chr1_3 | mRNA | 65945438 | 65947103 | 65945438 | ID=Msa0134440-mRNA-1;Parent=Msa0134440;Name=Msa0134440-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|326 |
| chr1_3 | exon | 65946807 | 65947103 | 65946807 | ID=Msa0134440-mRNA-1:exon:22452;Parent=Msa0134440-mRNA-1 |
| chr1_3 | exon | 65945438 | 65946121 | 65945438 | ID=Msa0134440-mRNA-1:exon:22451;Parent=Msa0134440-mRNA-1 |
| chr1_3 | CDS | 65946807 | 65947103 | 65946807 | ID=Msa0134440-mRNA-1:cds;Parent=Msa0134440-mRNA-1 |
| chr1_3 | CDS | 65945438 | 65946121 | 65945438 | ID=Msa0134440-mRNA-1:cds;Parent=Msa0134440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
