AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0043300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0043300 MtrunA17_Chr1g0209281 95.855 193 6 1 1 191 1 193 2.61e-135 376
Msa0043300 MtrunA17_Chr1g0209321 46.073 191 92 4 1 189 1 182 9.31e-49 156
Msa0043300 MtrunA17_Chr2g0318011 47.904 167 85 1 4 168 3 169 1.25e-43 144
Msa0043300 MtrunA17_Chr5g0423771 40.230 174 102 1 4 175 7 180 3.11e-41 137
Msa0043300 MtrunA17_Chr4g0047771 42.604 169 93 3 1 167 1 167 5.81e-39 131
Msa0043300 MtrunA17_Chr1g0209311 55.000 100 43 1 1 100 1 98 3.72e-33 114
Msa0043300 MtrunA17_Chr1g0209301 65.882 85 28 1 104 187 21 105 1.70e-32 112
Msa0043300 MtrunA17_Chr1g0209291 52.000 100 46 1 1 100 1 98 5.26e-27 98.6
Msa0043300 MtrunA17_Chr4g0039411 30.978 184 115 7 1 176 1 180 8.65e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0043300 AT1G68220.1 62.051 195 69 3 1 190 1 195 1.28e-83 246
Msa0043300 AT1G52910.1 45.143 175 92 3 1 172 1 174 5.87e-46 149
Msa0043300 AT3G15480.1 46.629 178 87 4 1 175 1 173 3.00e-45 147
Msa0043300 AT4G27435.1 47.771 157 80 1 10 164 9 165 4.98e-44 144
Msa0043300 AT1G13380.1 44.172 163 86 2 4 164 7 166 2.32e-38 130
Msa0043300 AT1G61065.1 41.317 167 93 3 17 181 16 179 3.41e-36 125

Find 52 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAGGCTGACACTGGTTTC+TGG 0.168217 1_1:-74437378 Msa0043300:CDS
AACAAACAATACAGAGTAAA+AGG 0.169531 1_1:-74439326 Msa0043300:five_prime_UTR
CCAATCCAATGCCTTCATTT+TGG 0.194665 1_1:+74437347 None:intergenic
CGCAAAGGTGTGTTTGCTGC+TGG 0.268553 1_1:-74437457 Msa0043300:CDS
CTTCAGGGCCTATCAGATTC+AGG 0.371981 1_1:+74437307 None:intergenic
CTTGACCTTGTTCTCTATGT+TGG 0.382330 1_1:-74437428 Msa0043300:CDS
TACAGACACAGCCATGATTT+CGG 0.392499 1_1:+74439270 None:intergenic
GCAGAGGCGTGCTTGTTAGC+AGG 0.394015 1_1:-74437553 Msa0043300:CDS
GCAAAGGTGTGTTTGCTGCT+GGG 0.415418 1_1:-74437456 Msa0043300:CDS
CAAGGCTGACACTGGTTTCT+GGG 0.415808 1_1:-74437377 Msa0043300:CDS
ATCAATAAAGCCAGGATCGC+TGG 0.417101 1_1:-74438224 Msa0043300:intron
AATATCTTCAATTCAATGTC+TGG 0.429834 1_1:+74439376 None:intergenic
CAAATTGAACACCGAAATCA+TGG 0.450311 1_1:-74439281 Msa0043300:exon
CAAAGGTGTGTTTGCTGCTG+GGG 0.452357 1_1:-74437455 Msa0043300:CDS
GAACAGTTTGACTAAGAAGC+AGG 0.481436 1_1:+74439001 None:intergenic
TCATCTTCTTCATTCTCTCA+TGG 0.481945 1_1:-74438909 Msa0043300:intron
AGAGATGAAGAGAAATGATA+AGG 0.482501 1_1:+74439236 None:intergenic
GTTCGGTCATCGTACTCATC+AGG 0.486965 1_1:+74439081 None:intergenic
AGATGTCTTTGCTGTGGTAA+AGG 0.489539 1_1:-74438964 Msa0043300:CDS
TGTGGTAAAGGTCTCATCTC+TGG 0.498793 1_1:-74438952 Msa0043300:CDS
ATCACGGTCCTGAATCTGAT+AGG 0.506038 1_1:-74437315 Msa0043300:CDS
GCTTGTTAGCAGGCTCTGCT+AGG 0.513926 1_1:-74437543 Msa0043300:CDS
AAGCACCAAAATGAAGGCAT+TGG 0.516097 1_1:-74437352 Msa0043300:CDS
TGGTGTAAACACAGAAAGTT+CGG 0.520390 1_1:+74439064 None:intergenic
ACAAACAATACAGAGTAAAA+GGG 0.532829 1_1:-74439325 Msa0043300:five_prime_UTR
TGGGAGAAGCACCAAAATGA+AGG 0.543939 1_1:-74437358 Msa0043300:CDS
CTGAATCTGATAGGCCCTGA+AGG 0.547032 1_1:-74437306 None:intergenic
CCAAAATGAAGGCATTGGAT+TGG 0.547050 1_1:-74437347 Msa0043300:CDS
CCCTCGGTACTTTGTGTGGT+AGG 0.550996 1_1:+74437516 None:intergenic
CCAGAAACCAGTGTCAGCCT+TGG 0.551041 1_1:+74437378 None:intergenic
AATTCCCTCGGTACTTTGTG+TGG 0.559584 1_1:+74437512 None:intergenic
GAAGAAGATGACAGCGCAAG+TGG 0.562935 1_1:+74438921 None:intergenic
GCACACGCCAAGGCTGACAC+TGG 0.573418 1_1:-74437385 Msa0043300:CDS
ACCGACGCTTCCACTGTCTA+CGG 0.578522 1_1:-74439042 Msa0043300:CDS
GTACTATTGGGCACACGCCA+AGG 0.584073 1_1:-74437395 Msa0043300:CDS
CGCTGAACGACGTCGTAGTG+AGG 0.588172 1_1:-74439191 Msa0043300:intron
AGCAGCAACACCGTAGACAG+TGG 0.594874 1_1:+74439032 None:intergenic
GTACTCATCAGGAACCACTT+TGG 0.600621 1_1:+74439092 None:intergenic
ACCGTAGACAGTGGAAGCGT+CGG 0.606731 1_1:+74439041 None:intergenic
AGAAGCCAACATAGAGAACA+AGG 0.611678 1_1:+74437423 None:intergenic
GTCACTAGATGTCTTTGCTG+TGG 0.617569 1_1:-74438970 Msa0043300:CDS
GTAGACAGTGGAAGCGTCGG+TGG 0.627400 1_1:+74439044 None:intergenic
CGTGTGTCACAAAATTCCCT+CGG 0.630799 1_1:+74437500 None:intergenic
CAACATAGAGAACAAGGTCA+AGG 0.636116 1_1:+74437429 None:intergenic
TCTTGCGCTACACTTCGCAA+AGG 0.645552 1_1:-74437472 Msa0043300:CDS
GGATTGGCCACACACAATCA+CGG 0.646265 1_1:-74437331 Msa0043300:CDS
TTCAGGACCGTGATTGTGTG+TGG 0.660100 1_1:+74437324 None:intergenic
GCCTACCACACAAAGTACCG+AGG 0.682833 1_1:-74437517 Msa0043300:CDS
CCTACCACACAAAGTACCGA+GGG 0.685131 1_1:-74437516 Msa0043300:CDS
AATAAAGCCAGGATCGCTGG+AGG 0.685316 1_1:-74438221 Msa0043300:intron
ACAGCAAAGACATCTAGTGA+CGG 0.697347 1_1:+74438972 None:intergenic
GAATTGAAGATATTAGTGAG+TGG 0.730524 1_1:-74439367 Msa0043300:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTACAACAAAAAAAAAGA+GGG + chr1_1:74437885-74437904 None:intergenic 15.0%
!! TATTTACAACAAAAAAAAAG+AGG + chr1_1:74437886-74437905 None:intergenic 15.0%
!! AAAATTAATTGTGTTGAATT+TGG - chr1_1:74437992-74438011 Msa0043300:intron 15.0%
!!! TTGGTAATTTGATAAAAATT+TGG - chr1_1:74438011-74438030 Msa0043300:intron 15.0%
!! AAGCAAAAAATAAATATGAT+GGG + chr1_1:74438848-74438867 None:intergenic 15.0%
!! AAAGCAAAAAATAAATATGA+TGG + chr1_1:74438849-74438868 None:intergenic 15.0%
!! ATTTACAACAAAAAAAAAGA+GGG + chr1_1:74437885-74437904 None:intergenic 15.0%
!! TATTTACAACAAAAAAAAAG+AGG + chr1_1:74437886-74437905 None:intergenic 15.0%
!! AAAATTAATTGTGTTGAATT+TGG - chr1_1:74437992-74438011 Msa0043300:intron 15.0%
!!! TTGGTAATTTGATAAAAATT+TGG - chr1_1:74438011-74438030 Msa0043300:intron 15.0%
!! AAGCAAAAAATAAATATGAT+GGG + chr1_1:74438848-74438867 None:intergenic 15.0%
!! AAAGCAAAAAATAAATATGA+TGG + chr1_1:74438849-74438868 None:intergenic 15.0%
!!! TTAGTGTTGAAATTAAAGAA+AGG + chr1_1:74437570-74437589 None:intergenic 20.0%
!! AAATAAAAAGCTGTAATGAT+TGG + chr1_1:74437849-74437868 None:intergenic 20.0%
!!! AAAAAAAGAGGGTTTTTTAA+GGG + chr1_1:74437874-74437893 None:intergenic 20.0%
!!! AAAAAAAAGAGGGTTTTTTA+AGG + chr1_1:74437875-74437894 None:intergenic 20.0%
!! CTAAGTAATAATACAAAAGA+AGG + chr1_1:74438909-74438928 None:intergenic 20.0%
!! CTTATACATATAAACACAAA+AGG + chr1_1:74438980-74438999 None:intergenic 20.0%
!!! TTAGTGTTGAAATTAAAGAA+AGG + chr1_1:74437570-74437589 None:intergenic 20.0%
!! AAATAAAAAGCTGTAATGAT+TGG + chr1_1:74437849-74437868 None:intergenic 20.0%
!!! AAAAAAAGAGGGTTTTTTAA+GGG + chr1_1:74437874-74437893 None:intergenic 20.0%
!!! AAAAAAAAGAGGGTTTTTTA+AGG + chr1_1:74437875-74437894 None:intergenic 20.0%
!! CTAAGTAATAATACAAAAGA+AGG + chr1_1:74438909-74438928 None:intergenic 20.0%
!! CTTATACATATAAACACAAA+AGG + chr1_1:74438980-74438999 None:intergenic 20.0%
! AATATCTTCAATTCAATGTC+TGG + chr1_1:74437352-74437371 None:intergenic 25.0%
! AACAAACAATACAGAGTAAA+AGG - chr1_1:74437399-74437418 Msa0043300:CDS 25.0%
! ACAAACAATACAGAGTAAAA+GGG - chr1_1:74437400-74437419 Msa0043300:CDS 25.0%
!! AATCTGATTAATCTCTTTTC+AGG - chr1_1:74437610-74437629 Msa0043300:intron 25.0%
!!! AAAAAAGAGGGTTTTTTAAG+GGG + chr1_1:74437873-74437892 None:intergenic 25.0%
! AAATACAAGAAGAAGAAAAG+TGG - chr1_1:74437901-74437920 Msa0043300:intron 25.0%
! AATTATTAATGGTGTCTATG+TGG + chr1_1:74438346-74438365 None:intergenic 25.0%
! TCATGGTCTCAAATTATTAA+TGG + chr1_1:74438357-74438376 None:intergenic 25.0%
! TCTCATAATGTTACAAAAAG+AGG + chr1_1:74438744-74438763 None:intergenic 25.0%
! TTTCACTAATTAGTAGAACT+AGG - chr1_1:74438781-74438800 Msa0043300:intron 25.0%
! TTCACTAATTAGTAGAACTA+GGG - chr1_1:74438782-74438801 Msa0043300:intron 25.0%
!!! TAGACTTCTATATGTTTTTG+AGG - chr1_1:74438868-74438887 Msa0043300:intron 25.0%
! TTAGTTTACTAGTGATTTAG+TGG - chr1_1:74438925-74438944 Msa0043300:CDS 25.0%
! AATCATCATTATTTCACTTC+AGG + chr1_1:74439111-74439130 None:intergenic 25.0%
! ATTATTGTTGCTGTAAAATC+AGG - chr1_1:74439134-74439153 Msa0043300:intron 25.0%
! AATATCTTCAATTCAATGTC+TGG + chr1_1:74437352-74437371 None:intergenic 25.0%
! AACAAACAATACAGAGTAAA+AGG - chr1_1:74437399-74437418 Msa0043300:CDS 25.0%
! ACAAACAATACAGAGTAAAA+GGG - chr1_1:74437400-74437419 Msa0043300:CDS 25.0%
!! AATCTGATTAATCTCTTTTC+AGG - chr1_1:74437610-74437629 Msa0043300:intron 25.0%
!!! AAAAAAGAGGGTTTTTTAAG+GGG + chr1_1:74437873-74437892 None:intergenic 25.0%
! AAATACAAGAAGAAGAAAAG+TGG - chr1_1:74437901-74437920 Msa0043300:intron 25.0%
! AATTATTAATGGTGTCTATG+TGG + chr1_1:74438346-74438365 None:intergenic 25.0%
! TCATGGTCTCAAATTATTAA+TGG + chr1_1:74438357-74438376 None:intergenic 25.0%
! TCTCATAATGTTACAAAAAG+AGG + chr1_1:74438744-74438763 None:intergenic 25.0%
! TTTCACTAATTAGTAGAACT+AGG - chr1_1:74438781-74438800 Msa0043300:intron 25.0%
! TTCACTAATTAGTAGAACTA+GGG - chr1_1:74438782-74438801 Msa0043300:intron 25.0%
!!! TAGACTTCTATATGTTTTTG+AGG - chr1_1:74438868-74438887 Msa0043300:intron 25.0%
! TTAGTTTACTAGTGATTTAG+TGG - chr1_1:74438925-74438944 Msa0043300:CDS 25.0%
! AATCATCATTATTTCACTTC+AGG + chr1_1:74439111-74439130 None:intergenic 25.0%
! ATTATTGTTGCTGTAAAATC+AGG - chr1_1:74439134-74439153 Msa0043300:intron 25.0%
GAATTGAAGATATTAGTGAG+TGG - chr1_1:74437358-74437377 Msa0043300:CDS 30.0%
AGAGATGAAGAGAAATGATA+AGG + chr1_1:74437492-74437511 None:intergenic 30.0%
!! TTAGCTTTCGTTTTTGCTAT+AGG - chr1_1:74437511-74437530 Msa0043300:CDS 30.0%
GAAGTCTTTGTACATGAATT+CGG - chr1_1:74438084-74438103 Msa0043300:intron 30.0%
ATGCTGAGCTTGAAAAAATA+TGG + chr1_1:74438189-74438208 None:intergenic 30.0%
TTTATTGATGTATGGAACCA+TGG + chr1_1:74438490-74438509 None:intergenic 30.0%
TGGTCATGTGAAAGAAAATA+GGG + chr1_1:74438715-74438734 None:intergenic 30.0%
ATGGTCATGTGAAAGAAAAT+AGG + chr1_1:74438716-74438735 None:intergenic 30.0%
GTTACAAAAAGAGGAAGTAA+TGG + chr1_1:74438735-74438754 None:intergenic 30.0%
TAATTAGTGAAAGATCCTGA+GGG + chr1_1:74438773-74438792 None:intergenic 30.0%
!! TCTATATGTTTTTGAGGATG+AGG - chr1_1:74438874-74438893 Msa0043300:intron 30.0%
!! CTATATGTTTTTGAGGATGA+GGG - chr1_1:74438875-74438894 Msa0043300:intron 30.0%
TCGAGATTCTATGTAAGATT+GGG + chr1_1:74439073-74439092 None:intergenic 30.0%
! TGGCTTCTATTTTGTACTAT+TGG - chr1_1:74439317-74439336 Msa0043300:five_prime_UTR 30.0%
! GGCTTCTATTTTGTACTATT+GGG - chr1_1:74439318-74439337 Msa0043300:five_prime_UTR 30.0%
GAATTGAAGATATTAGTGAG+TGG - chr1_1:74437358-74437377 Msa0043300:CDS 30.0%
AGAGATGAAGAGAAATGATA+AGG + chr1_1:74437492-74437511 None:intergenic 30.0%
!! TTAGCTTTCGTTTTTGCTAT+AGG - chr1_1:74437511-74437530 Msa0043300:CDS 30.0%
GAAGTCTTTGTACATGAATT+CGG - chr1_1:74438084-74438103 Msa0043300:intron 30.0%
ATGCTGAGCTTGAAAAAATA+TGG + chr1_1:74438189-74438208 None:intergenic 30.0%
TTTATTGATGTATGGAACCA+TGG + chr1_1:74438490-74438509 None:intergenic 30.0%
TGGTCATGTGAAAGAAAATA+GGG + chr1_1:74438715-74438734 None:intergenic 30.0%
ATGGTCATGTGAAAGAAAAT+AGG + chr1_1:74438716-74438735 None:intergenic 30.0%
GTTACAAAAAGAGGAAGTAA+TGG + chr1_1:74438735-74438754 None:intergenic 30.0%
TAATTAGTGAAAGATCCTGA+GGG + chr1_1:74438773-74438792 None:intergenic 30.0%
!! TCTATATGTTTTTGAGGATG+AGG - chr1_1:74438874-74438893 Msa0043300:intron 30.0%
!! CTATATGTTTTTGAGGATGA+GGG - chr1_1:74438875-74438894 Msa0043300:intron 30.0%
TCGAGATTCTATGTAAGATT+GGG + chr1_1:74439073-74439092 None:intergenic 30.0%
! TGGCTTCTATTTTGTACTAT+TGG - chr1_1:74439317-74439336 Msa0043300:five_prime_UTR 30.0%
! GGCTTCTATTTTGTACTATT+GGG - chr1_1:74439318-74439337 Msa0043300:five_prime_UTR 30.0%
CAAATTGAACACCGAAATCA+TGG - chr1_1:74437444-74437463 Msa0043300:CDS 35.0%
TGGTGTAAACACAGAAAGTT+CGG + chr1_1:74437664-74437683 None:intergenic 35.0%
TCATCTTCTTCATTCTCTCA+TGG - chr1_1:74437816-74437835 Msa0043300:intron 35.0%
! CGTAAGTGTTGTATATGTGT+TGG - chr1_1:74438388-74438407 Msa0043300:intron 35.0%
TTCCATACATCAATAAAGCC+AGG - chr1_1:74438493-74438512 Msa0043300:intron 35.0%
!! ATCCTGGCTTTATTGATGTA+TGG + chr1_1:74438498-74438517 None:intergenic 35.0%
ATGTGAAAGAAAATAGGGGA+AGG + chr1_1:74438710-74438729 None:intergenic 35.0%
GGTCATGTGAAAGAAAATAG+GGG + chr1_1:74438714-74438733 None:intergenic 35.0%
AATTAGTGAAAGATCCTGAG+GGG + chr1_1:74438772-74438791 None:intergenic 35.0%
CTAATTAGTGAAAGATCCTG+AGG + chr1_1:74438774-74438793 None:intergenic 35.0%
! TAGTAGAACTAGGGTTTTTC+TGG - chr1_1:74438791-74438810 Msa0043300:intron 35.0%
AACTGTAAGATCCTACAGAA+GGG + chr1_1:74439013-74439032 None:intergenic 35.0%
ATTCTATGTAAGATTGGGAG+GGG + chr1_1:74439068-74439087 None:intergenic 35.0%
GATTCTATGTAAGATTGGGA+GGG + chr1_1:74439069-74439088 None:intergenic 35.0%
AGATTCTATGTAAGATTGGG+AGG + chr1_1:74439070-74439089 None:intergenic 35.0%
CTCGAGATTCTATGTAAGAT+TGG + chr1_1:74439074-74439093 None:intergenic 35.0%
!!! TAAAATCAGGACCGGTTTTT+TGG - chr1_1:74439147-74439166 Msa0043300:intron 35.0%
CAAATTGAACACCGAAATCA+TGG - chr1_1:74437444-74437463 Msa0043300:CDS 35.0%
TGGTGTAAACACAGAAAGTT+CGG + chr1_1:74437664-74437683 None:intergenic 35.0%
TCATCTTCTTCATTCTCTCA+TGG - chr1_1:74437816-74437835 Msa0043300:intron 35.0%
! CGTAAGTGTTGTATATGTGT+TGG - chr1_1:74438388-74438407 Msa0043300:intron 35.0%
TTCCATACATCAATAAAGCC+AGG - chr1_1:74438493-74438512 Msa0043300:intron 35.0%
!! ATCCTGGCTTTATTGATGTA+TGG + chr1_1:74438498-74438517 None:intergenic 35.0%
ATGTGAAAGAAAATAGGGGA+AGG + chr1_1:74438710-74438729 None:intergenic 35.0%
GGTCATGTGAAAGAAAATAG+GGG + chr1_1:74438714-74438733 None:intergenic 35.0%
AATTAGTGAAAGATCCTGAG+GGG + chr1_1:74438772-74438791 None:intergenic 35.0%
CTAATTAGTGAAAGATCCTG+AGG + chr1_1:74438774-74438793 None:intergenic 35.0%
! TAGTAGAACTAGGGTTTTTC+TGG - chr1_1:74438791-74438810 Msa0043300:intron 35.0%
AACTGTAAGATCCTACAGAA+GGG + chr1_1:74439013-74439032 None:intergenic 35.0%
ATTCTATGTAAGATTGGGAG+GGG + chr1_1:74439068-74439087 None:intergenic 35.0%
GATTCTATGTAAGATTGGGA+GGG + chr1_1:74439069-74439088 None:intergenic 35.0%
AGATTCTATGTAAGATTGGG+AGG + chr1_1:74439070-74439089 None:intergenic 35.0%
CTCGAGATTCTATGTAAGAT+TGG + chr1_1:74439074-74439093 None:intergenic 35.0%
!!! TAAAATCAGGACCGGTTTTT+TGG - chr1_1:74439147-74439166 Msa0043300:intron 35.0%
TACAGACACAGCCATGATTT+CGG + chr1_1:74437458-74437477 None:intergenic 40.0%
!! AATCTCTTTTCAGGCCAAAG+TGG - chr1_1:74437619-74437638 Msa0043300:intron 40.0%
GAACAGTTTGACTAAGAAGC+AGG + chr1_1:74437727-74437746 None:intergenic 40.0%
ACAGCAAAGACATCTAGTGA+CGG + chr1_1:74437756-74437775 None:intergenic 40.0%
! AGATGTCTTTGCTGTGGTAA+AGG - chr1_1:74437761-74437780 Msa0043300:intron 40.0%
AACATCCAATGACATGTCGA+CGG + chr1_1:74438148-74438167 None:intergenic 40.0%
CATTTACGTAGTTGGGACAT+TGG + chr1_1:74438284-74438303 None:intergenic 40.0%
GTGTTGGACACAAATATGTG+TGG - chr1_1:74438404-74438423 Msa0043300:intron 40.0%
!! TTGCAAGATCGCTTTTGCAA+CGG - chr1_1:74438570-74438589 Msa0043300:intron 40.0%
!! ACTAGGGTTTTTCTGGTGAA+TGG - chr1_1:74438798-74438817 Msa0043300:intron 40.0%
!! CTAGGGTTTTTCTGGTGAAT+GGG - chr1_1:74438799-74438818 Msa0043300:intron 40.0%
TGAATGGGAAAAGAGAGCTT+GGG - chr1_1:74438814-74438833 Msa0043300:intron 40.0%
!! AATAAATATGATGGGCCTCG+TGG + chr1_1:74438840-74438859 None:intergenic 40.0%
CAACTGTAAGATCCTACAGA+AGG + chr1_1:74439014-74439033 None:intergenic 40.0%
GGTTGAAAGATCATAAGTCG+AGG + chr1_1:74439046-74439065 None:intergenic 40.0%
TTCTATGTAAGATTGGGAGG+GGG + chr1_1:74439067-74439086 None:intergenic 40.0%
TGTTGCTGTAAAATCAGGAC+CGG - chr1_1:74439139-74439158 Msa0043300:intron 40.0%
CAACATAGAGAACAAGGTCA+AGG + chr1_1:74439299-74439318 None:intergenic 40.0%
CTTGACCTTGTTCTCTATGT+TGG - chr1_1:74439297-74439316 Msa0043300:five_prime_UTR 40.0%
AGAAGCCAACATAGAGAACA+AGG + chr1_1:74439305-74439324 None:intergenic 40.0%
! AAGCACCAAAATGAAGGCAT+TGG - chr1_1:74439373-74439392 Msa0043300:five_prime_UTR 40.0%
! CCAATCCAATGCCTTCATTT+TGG + chr1_1:74439381-74439400 None:intergenic 40.0%
!! CCAAAATGAAGGCATTGGAT+TGG - chr1_1:74439378-74439397 Msa0043300:five_prime_UTR 40.0%
TACAGACACAGCCATGATTT+CGG + chr1_1:74437458-74437477 None:intergenic 40.0%
!! AATCTCTTTTCAGGCCAAAG+TGG - chr1_1:74437619-74437638 Msa0043300:intron 40.0%
GAACAGTTTGACTAAGAAGC+AGG + chr1_1:74437727-74437746 None:intergenic 40.0%
ACAGCAAAGACATCTAGTGA+CGG + chr1_1:74437756-74437775 None:intergenic 40.0%
! AGATGTCTTTGCTGTGGTAA+AGG - chr1_1:74437761-74437780 Msa0043300:intron 40.0%
AACATCCAATGACATGTCGA+CGG + chr1_1:74438148-74438167 None:intergenic 40.0%
CATTTACGTAGTTGGGACAT+TGG + chr1_1:74438284-74438303 None:intergenic 40.0%
GTGTTGGACACAAATATGTG+TGG - chr1_1:74438404-74438423 Msa0043300:intron 40.0%
!! TTGCAAGATCGCTTTTGCAA+CGG - chr1_1:74438570-74438589 Msa0043300:intron 40.0%
!! ACTAGGGTTTTTCTGGTGAA+TGG - chr1_1:74438798-74438817 Msa0043300:intron 40.0%
!! CTAGGGTTTTTCTGGTGAAT+GGG - chr1_1:74438799-74438818 Msa0043300:intron 40.0%
TGAATGGGAAAAGAGAGCTT+GGG - chr1_1:74438814-74438833 Msa0043300:intron 40.0%
!! AATAAATATGATGGGCCTCG+TGG + chr1_1:74438840-74438859 None:intergenic 40.0%
CAACTGTAAGATCCTACAGA+AGG + chr1_1:74439014-74439033 None:intergenic 40.0%
GGTTGAAAGATCATAAGTCG+AGG + chr1_1:74439046-74439065 None:intergenic 40.0%
TTCTATGTAAGATTGGGAGG+GGG + chr1_1:74439067-74439086 None:intergenic 40.0%
TGTTGCTGTAAAATCAGGAC+CGG - chr1_1:74439139-74439158 Msa0043300:intron 40.0%
CAACATAGAGAACAAGGTCA+AGG + chr1_1:74439299-74439318 None:intergenic 40.0%
CTTGACCTTGTTCTCTATGT+TGG - chr1_1:74439297-74439316 Msa0043300:five_prime_UTR 40.0%
AGAAGCCAACATAGAGAACA+AGG + chr1_1:74439305-74439324 None:intergenic 40.0%
! AAGCACCAAAATGAAGGCAT+TGG - chr1_1:74439373-74439392 Msa0043300:five_prime_UTR 40.0%
! CCAATCCAATGCCTTCATTT+TGG + chr1_1:74439381-74439400 None:intergenic 40.0%
!! CCAAAATGAAGGCATTGGAT+TGG - chr1_1:74439378-74439397 Msa0043300:five_prime_UTR 40.0%
GTACTCATCAGGAACCACTT+TGG + chr1_1:74437636-74437655 None:intergenic 45.0%
GTCACTAGATGTCTTTGCTG+TGG - chr1_1:74437755-74437774 Msa0043300:intron 45.0%
TGTGGTAAAGGTCTCATCTC+TGG - chr1_1:74437773-74437792 Msa0043300:intron 45.0%
ACATCCAATGACATGTCGAC+GGG + chr1_1:74438147-74438166 None:intergenic 45.0%
TTACGTAGTTGGGACATTGG+TGG + chr1_1:74438281-74438300 None:intergenic 45.0%
TGTCCCAACTACGTAAATGC+AGG - chr1_1:74438285-74438304 Msa0043300:intron 45.0%
GTCCCAACTACGTAAATGCA+GGG - chr1_1:74438286-74438305 Msa0043300:intron 45.0%
TCCCAACTACGTAAATGCAG+GGG - chr1_1:74438287-74438306 Msa0043300:intron 45.0%
TCCCCTGCATTTACGTAGTT+GGG + chr1_1:74438291-74438310 None:intergenic 45.0%
ATCCCCTGCATTTACGTAGT+TGG + chr1_1:74438292-74438311 None:intergenic 45.0%
GATTACGTGCAACCGAAATC+GGG + chr1_1:74438324-74438343 None:intergenic 45.0%
GGATTACGTGCAACCGAAAT+CGG + chr1_1:74438325-74438344 None:intergenic 45.0%
CTTACGCTCTCTCACTTTCA+TGG + chr1_1:74438374-74438393 None:intergenic 45.0%
GATCTTGACTACACTGCTTC+AGG + chr1_1:74438442-74438461 None:intergenic 45.0%
ATCAATAAAGCCAGGATCGC+TGG - chr1_1:74438501-74438520 Msa0043300:intron 45.0%
!! TGCAAGATCGCTTTTGCAAC+GGG - chr1_1:74438571-74438590 Msa0043300:intron 45.0%
ATATGAACGCCATCACAGAG+AGG + chr1_1:74438614-74438633 None:intergenic 45.0%
TGTGAGAACTGCGTCAGAAT+GGG + chr1_1:74438648-74438667 None:intergenic 45.0%
ATGTGAGAACTGCGTCAGAA+TGG + chr1_1:74438649-74438668 None:intergenic 45.0%
ATTATGAGAGTTGACCCCTC+AGG - chr1_1:74438755-74438774 Msa0043300:intron 45.0%
GTGAATGGGAAAAGAGAGCT+TGG - chr1_1:74438813-74438832 Msa0043300:intron 45.0%
! GCACAATTTTGCCCTTCTGT+AGG - chr1_1:74438999-74439018 Msa0043300:CDS 45.0%
AATTCCCTCGGTACTTTGTG+TGG + chr1_1:74439216-74439235 None:intergenic 45.0%
CGTGTGTCACAAAATTCCCT+CGG + chr1_1:74439228-74439247 None:intergenic 45.0%
!! TGGGAGAAGCACCAAAATGA+AGG - chr1_1:74439367-74439386 Msa0043300:five_prime_UTR 45.0%
ATCACGGTCCTGAATCTGAT+AGG - chr1_1:74439410-74439429 Msa0043300:five_prime_UTR 45.0%
GTACTCATCAGGAACCACTT+TGG + chr1_1:74437636-74437655 None:intergenic 45.0%
GTCACTAGATGTCTTTGCTG+TGG - chr1_1:74437755-74437774 Msa0043300:intron 45.0%
TGTGGTAAAGGTCTCATCTC+TGG - chr1_1:74437773-74437792 Msa0043300:intron 45.0%
ACATCCAATGACATGTCGAC+GGG + chr1_1:74438147-74438166 None:intergenic 45.0%
TTACGTAGTTGGGACATTGG+TGG + chr1_1:74438281-74438300 None:intergenic 45.0%
TGTCCCAACTACGTAAATGC+AGG - chr1_1:74438285-74438304 Msa0043300:intron 45.0%
GTCCCAACTACGTAAATGCA+GGG - chr1_1:74438286-74438305 Msa0043300:intron 45.0%
TCCCAACTACGTAAATGCAG+GGG - chr1_1:74438287-74438306 Msa0043300:intron 45.0%
TCCCCTGCATTTACGTAGTT+GGG + chr1_1:74438291-74438310 None:intergenic 45.0%
ATCCCCTGCATTTACGTAGT+TGG + chr1_1:74438292-74438311 None:intergenic 45.0%
GATTACGTGCAACCGAAATC+GGG + chr1_1:74438324-74438343 None:intergenic 45.0%
GGATTACGTGCAACCGAAAT+CGG + chr1_1:74438325-74438344 None:intergenic 45.0%
CTTACGCTCTCTCACTTTCA+TGG + chr1_1:74438374-74438393 None:intergenic 45.0%
GATCTTGACTACACTGCTTC+AGG + chr1_1:74438442-74438461 None:intergenic 45.0%
ATCAATAAAGCCAGGATCGC+TGG - chr1_1:74438501-74438520 Msa0043300:intron 45.0%
!! TGCAAGATCGCTTTTGCAAC+GGG - chr1_1:74438571-74438590 Msa0043300:intron 45.0%
ATATGAACGCCATCACAGAG+AGG + chr1_1:74438614-74438633 None:intergenic 45.0%
TGTGAGAACTGCGTCAGAAT+GGG + chr1_1:74438648-74438667 None:intergenic 45.0%
ATGTGAGAACTGCGTCAGAA+TGG + chr1_1:74438649-74438668 None:intergenic 45.0%
ATTATGAGAGTTGACCCCTC+AGG - chr1_1:74438755-74438774 Msa0043300:intron 45.0%
GTGAATGGGAAAAGAGAGCT+TGG - chr1_1:74438813-74438832 Msa0043300:intron 45.0%
! GCACAATTTTGCCCTTCTGT+AGG - chr1_1:74438999-74439018 Msa0043300:CDS 45.0%
AATTCCCTCGGTACTTTGTG+TGG + chr1_1:74439216-74439235 None:intergenic 45.0%
CGTGTGTCACAAAATTCCCT+CGG + chr1_1:74439228-74439247 None:intergenic 45.0%
!! TGGGAGAAGCACCAAAATGA+AGG - chr1_1:74439367-74439386 Msa0043300:five_prime_UTR 45.0%
ATCACGGTCCTGAATCTGAT+AGG - chr1_1:74439410-74439429 Msa0043300:five_prime_UTR 45.0%
GTTCGGTCATCGTACTCATC+AGG + chr1_1:74437647-74437666 None:intergenic 50.0%
GAAGAAGATGACAGCGCAAG+TGG + chr1_1:74437807-74437826 None:intergenic 50.0%
CATCCAATGACATGTCGACG+GGG + chr1_1:74438146-74438165 None:intergenic 50.0%
! GATTGCCGATTGCCCGATTT+CGG - chr1_1:74438309-74438328 Msa0043300:intron 50.0%
TGCAACCGAAATCGGGCAAT+CGG + chr1_1:74438317-74438336 None:intergenic 50.0%
GTGTAGTCAAGATCGTGAGC+TGG - chr1_1:74438448-74438467 Msa0043300:intron 50.0%
! AAGATCGTGAGCTGGCTCAT+AGG - chr1_1:74438456-74438475 Msa0043300:intron 50.0%
GATGTATGGAACCATGGCCA+TGG + chr1_1:74438484-74438503 None:intergenic 50.0%
AATAAAGCCAGGATCGCTGG+AGG - chr1_1:74438504-74438523 Msa0043300:intron 50.0%
!! GCTTTTGCAACGGGCTTTCA+CGG - chr1_1:74438580-74438599 Msa0043300:intron 50.0%
AGAAGGTGAGCAGATCGCAA+GGG + chr1_1:74438681-74438700 None:intergenic 50.0%
AAGAAGGTGAGCAGATCGCA+AGG + chr1_1:74438682-74438701 None:intergenic 50.0%
ATAGGGGAAGGCAGAGAAGA+AGG + chr1_1:74438698-74438717 None:intergenic 50.0%
!! CCTACCACACAAAGTACCGA+GGG - chr1_1:74439209-74439228 Msa0043300:CDS 50.0%
TCTTGCGCTACACTTCGCAA+AGG - chr1_1:74439253-74439272 Msa0043300:CDS 50.0%
! GCAAAGGTGTGTTTGCTGCT+GGG - chr1_1:74439269-74439288 Msa0043300:exon 50.0%
! CAAAGGTGTGTTTGCTGCTG+GGG - chr1_1:74439270-74439289 Msa0043300:exon 50.0%
!! CAAGGCTGACACTGGTTTCT+GGG - chr1_1:74439348-74439367 Msa0043300:five_prime_UTR 50.0%
!! GGATTGGCCACACACAATCA+CGG - chr1_1:74439394-74439413 Msa0043300:five_prime_UTR 50.0%
TTCAGGACCGTGATTGTGTG+TGG + chr1_1:74439404-74439423 None:intergenic 50.0%
GTTCGGTCATCGTACTCATC+AGG + chr1_1:74437647-74437666 None:intergenic 50.0%
GAAGAAGATGACAGCGCAAG+TGG + chr1_1:74437807-74437826 None:intergenic 50.0%
CATCCAATGACATGTCGACG+GGG + chr1_1:74438146-74438165 None:intergenic 50.0%
! GATTGCCGATTGCCCGATTT+CGG - chr1_1:74438309-74438328 Msa0043300:intron 50.0%
TGCAACCGAAATCGGGCAAT+CGG + chr1_1:74438317-74438336 None:intergenic 50.0%
GTGTAGTCAAGATCGTGAGC+TGG - chr1_1:74438448-74438467 Msa0043300:intron 50.0%
! AAGATCGTGAGCTGGCTCAT+AGG - chr1_1:74438456-74438475 Msa0043300:intron 50.0%
GATGTATGGAACCATGGCCA+TGG + chr1_1:74438484-74438503 None:intergenic 50.0%
AATAAAGCCAGGATCGCTGG+AGG - chr1_1:74438504-74438523 Msa0043300:intron 50.0%
!! GCTTTTGCAACGGGCTTTCA+CGG - chr1_1:74438580-74438599 Msa0043300:intron 50.0%
AGAAGGTGAGCAGATCGCAA+GGG + chr1_1:74438681-74438700 None:intergenic 50.0%
AAGAAGGTGAGCAGATCGCA+AGG + chr1_1:74438682-74438701 None:intergenic 50.0%
ATAGGGGAAGGCAGAGAAGA+AGG + chr1_1:74438698-74438717 None:intergenic 50.0%
!! CCTACCACACAAAGTACCGA+GGG - chr1_1:74439209-74439228 Msa0043300:CDS 50.0%
TCTTGCGCTACACTTCGCAA+AGG - chr1_1:74439253-74439272 Msa0043300:CDS 50.0%
! GCAAAGGTGTGTTTGCTGCT+GGG - chr1_1:74439269-74439288 Msa0043300:exon 50.0%
! CAAAGGTGTGTTTGCTGCTG+GGG - chr1_1:74439270-74439289 Msa0043300:exon 50.0%
!! CAAGGCTGACACTGGTTTCT+GGG - chr1_1:74439348-74439367 Msa0043300:five_prime_UTR 50.0%
!! GGATTGGCCACACACAATCA+CGG - chr1_1:74439394-74439413 Msa0043300:five_prime_UTR 50.0%
TTCAGGACCGTGATTGTGTG+TGG + chr1_1:74439404-74439423 None:intergenic 50.0%
ACCGACGCTTCCACTGTCTA+CGG - chr1_1:74437683-74437702 Msa0043300:intron 55.0%
! ACCGTAGACAGTGGAAGCGT+CGG + chr1_1:74437687-74437706 None:intergenic 55.0%
AGCAGCAACACCGTAGACAG+TGG + chr1_1:74437696-74437715 None:intergenic 55.0%
TCGGATTGCTTTCCCGCAGT+TGG - chr1_1:74438103-74438122 Msa0043300:intron 55.0%
TGAGGGTCAACTGCCAACTG+CGG + chr1_1:74438119-74438138 None:intergenic 55.0%
CATGTCGACGGGGTGAATGA+GGG + chr1_1:74438136-74438155 None:intergenic 55.0%
ACATGTCGACGGGGTGAATG+AGG + chr1_1:74438137-74438156 None:intergenic 55.0%
TCACCCCGTCGACATGTCAT+TGG - chr1_1:74438140-74438159 Msa0043300:intron 55.0%
! GAGCTGGCTCATAGGATCCA+TGG - chr1_1:74438464-74438483 Msa0043300:intron 55.0%
GCTCATAGGATCCATGGCCA+TGG - chr1_1:74438470-74438489 Msa0043300:intron 55.0%
GTGCACGATGTGGTCGAACT+CGG - chr1_1:74438532-74438551 Msa0043300:intron 55.0%
TGCACGATGTGGTCGAACTC+GGG - chr1_1:74438533-74438552 Msa0043300:intron 55.0%
TGGTCGAACTCGGGAGTTTG+AGG - chr1_1:74438542-74438561 Msa0043300:intron 55.0%
TCGAACTCGGGAGTTTGAGG+TGG - chr1_1:74438545-74438564 Msa0043300:intron 55.0%
TGAACGCCATCACAGAGAGG+AGG + chr1_1:74438611-74438630 None:intergenic 55.0%
AACTGCGTCAGAATGGGTGG+CGG + chr1_1:74438642-74438661 None:intergenic 55.0%
GAGAACTGCGTCAGAATGGG+TGG + chr1_1:74438645-74438664 None:intergenic 55.0%
GAAGGTGAGCAGATCGCAAG+GGG + chr1_1:74438680-74438699 None:intergenic 55.0%
AAAAGAGAGCTTGGGCCACG+AGG - chr1_1:74438822-74438841 Msa0043300:intron 55.0%
!!! GACCGGTTTTTTGGCAGCAG+AGG - chr1_1:74439156-74439175 Msa0043300:intron 55.0%
CGCCTCTGCTGCCAAAAAAC+CGG + chr1_1:74439161-74439180 None:intergenic 55.0%
! GCTTGTTAGCAGGCTCTGCT+AGG - chr1_1:74439182-74439201 Msa0043300:intron 55.0%
!! GCCTACCACACAAAGTACCG+AGG - chr1_1:74439208-74439227 Msa0043300:CDS 55.0%
CCCTCGGTACTTTGTGTGGT+AGG + chr1_1:74439212-74439231 None:intergenic 55.0%
! CGCAAAGGTGTGTTTGCTGC+TGG - chr1_1:74439268-74439287 Msa0043300:exon 55.0%
GTACTATTGGGCACACGCCA+AGG - chr1_1:74439330-74439349 Msa0043300:five_prime_UTR 55.0%
CCAGAAACCAGTGTCAGCCT+TGG + chr1_1:74439350-74439369 None:intergenic 55.0%
!! CCAAGGCTGACACTGGTTTC+TGG - chr1_1:74439347-74439366 Msa0043300:five_prime_UTR 55.0%
ACCGACGCTTCCACTGTCTA+CGG - chr1_1:74437683-74437702 Msa0043300:intron 55.0%
! ACCGTAGACAGTGGAAGCGT+CGG + chr1_1:74437687-74437706 None:intergenic 55.0%
AGCAGCAACACCGTAGACAG+TGG + chr1_1:74437696-74437715 None:intergenic 55.0%
TCGGATTGCTTTCCCGCAGT+TGG - chr1_1:74438103-74438122 Msa0043300:intron 55.0%
TGAGGGTCAACTGCCAACTG+CGG + chr1_1:74438119-74438138 None:intergenic 55.0%
CATGTCGACGGGGTGAATGA+GGG + chr1_1:74438136-74438155 None:intergenic 55.0%
ACATGTCGACGGGGTGAATG+AGG + chr1_1:74438137-74438156 None:intergenic 55.0%
TCACCCCGTCGACATGTCAT+TGG - chr1_1:74438140-74438159 Msa0043300:intron 55.0%
! GAGCTGGCTCATAGGATCCA+TGG - chr1_1:74438464-74438483 Msa0043300:intron 55.0%
GCTCATAGGATCCATGGCCA+TGG - chr1_1:74438470-74438489 Msa0043300:intron 55.0%
GTGCACGATGTGGTCGAACT+CGG - chr1_1:74438532-74438551 Msa0043300:intron 55.0%
TGCACGATGTGGTCGAACTC+GGG - chr1_1:74438533-74438552 Msa0043300:intron 55.0%
TGGTCGAACTCGGGAGTTTG+AGG - chr1_1:74438542-74438561 Msa0043300:intron 55.0%
TCGAACTCGGGAGTTTGAGG+TGG - chr1_1:74438545-74438564 Msa0043300:intron 55.0%
TGAACGCCATCACAGAGAGG+AGG + chr1_1:74438611-74438630 None:intergenic 55.0%
AACTGCGTCAGAATGGGTGG+CGG + chr1_1:74438642-74438661 None:intergenic 55.0%
GAGAACTGCGTCAGAATGGG+TGG + chr1_1:74438645-74438664 None:intergenic 55.0%
GAAGGTGAGCAGATCGCAAG+GGG + chr1_1:74438680-74438699 None:intergenic 55.0%
AAAAGAGAGCTTGGGCCACG+AGG - chr1_1:74438822-74438841 Msa0043300:intron 55.0%
!!! GACCGGTTTTTTGGCAGCAG+AGG - chr1_1:74439156-74439175 Msa0043300:intron 55.0%
CGCCTCTGCTGCCAAAAAAC+CGG + chr1_1:74439161-74439180 None:intergenic 55.0%
! GCTTGTTAGCAGGCTCTGCT+AGG - chr1_1:74439182-74439201 Msa0043300:intron 55.0%
!! GCCTACCACACAAAGTACCG+AGG - chr1_1:74439208-74439227 Msa0043300:CDS 55.0%
CCCTCGGTACTTTGTGTGGT+AGG + chr1_1:74439212-74439231 None:intergenic 55.0%
! CGCAAAGGTGTGTTTGCTGC+TGG - chr1_1:74439268-74439287 Msa0043300:exon 55.0%
GTACTATTGGGCACACGCCA+AGG - chr1_1:74439330-74439349 Msa0043300:five_prime_UTR 55.0%
CCAGAAACCAGTGTCAGCCT+TGG + chr1_1:74439350-74439369 None:intergenic 55.0%
!! CCAAGGCTGACACTGGTTTC+TGG - chr1_1:74439347-74439366 Msa0043300:five_prime_UTR 55.0%
CGCTGAACGACGTCGTAGTG+AGG - chr1_1:74437534-74437553 Msa0043300:CDS 60.0%
!! GTAGACAGTGGAAGCGTCGG+TGG + chr1_1:74437684-74437703 None:intergenic 60.0%
GAGGGTCAACTGCCAACTGC+GGG + chr1_1:74438118-74438137 None:intergenic 60.0%
GTCCCTCCTCCTCTCTGTGA+TGG - chr1_1:74438602-74438621 Msa0043300:intron 60.0%
CGCCATCACAGAGAGGAGGA+GGG + chr1_1:74438607-74438626 None:intergenic 60.0%
ACGCCATCACAGAGAGGAGG+AGG + chr1_1:74438608-74438627 None:intergenic 60.0%
! GCAGAGGCGTGCTTGTTAGC+AGG - chr1_1:74439172-74439191 Msa0043300:intron 60.0%
CGCTGAACGACGTCGTAGTG+AGG - chr1_1:74437534-74437553 Msa0043300:CDS 60.0%
!! GTAGACAGTGGAAGCGTCGG+TGG + chr1_1:74437684-74437703 None:intergenic 60.0%
GAGGGTCAACTGCCAACTGC+GGG + chr1_1:74438118-74438137 None:intergenic 60.0%
GTCCCTCCTCCTCTCTGTGA+TGG - chr1_1:74438602-74438621 Msa0043300:intron 60.0%
CGCCATCACAGAGAGGAGGA+GGG + chr1_1:74438607-74438626 None:intergenic 60.0%
ACGCCATCACAGAGAGGAGG+AGG + chr1_1:74438608-74438627 None:intergenic 60.0%
! GCAGAGGCGTGCTTGTTAGC+AGG - chr1_1:74439172-74439191 Msa0043300:intron 60.0%
ACGTGCACCTCCAGCGATCC+TGG + chr1_1:74438514-74438533 None:intergenic 65.0%
! GGAGGTGCACGTGCACGATG+TGG - chr1_1:74438522-74438541 Msa0043300:intron 65.0%
GGTGAGCAGATCGCAAGGGG+CGG + chr1_1:74438677-74438696 None:intergenic 65.0%
GCACACGCCAAGGCTGACAC+TGG - chr1_1:74439340-74439359 Msa0043300:five_prime_UTR 65.0%
ACGTGCACCTCCAGCGATCC+TGG + chr1_1:74438514-74438533 None:intergenic 65.0%
! GGAGGTGCACGTGCACGATG+TGG - chr1_1:74438522-74438541 Msa0043300:intron 65.0%
GGTGAGCAGATCGCAAGGGG+CGG + chr1_1:74438677-74438696 None:intergenic 65.0%
GCACACGCCAAGGCTGACAC+TGG - chr1_1:74439340-74439359 Msa0043300:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 74437309 74439438 74437309 ID=Msa0043300;Name=Msa0043300
chr1_1 mRNA 74437309 74439438 74437309 ID=Msa0043300-mRNA-1;Parent=Msa0043300;Name=Msa0043300-mRNA-1;_AED=0.40;_eAED=0.40;_QI=154|0.33|0.5|0.75|0.33|0.75|4|0|191
chr1_1 exon 74437309 74437574 74437309 ID=Msa0043300-mRNA-1:exon:25088;Parent=Msa0043300-mRNA-1
chr1_1 exon 74438222 74438232 74438222 ID=Msa0043300-mRNA-1:exon:25087;Parent=Msa0043300-mRNA-1
chr1_1 exon 74438910 74439115 74438910 ID=Msa0043300-mRNA-1:exon:25086;Parent=Msa0043300-mRNA-1
chr1_1 exon 74439192 74439438 74439192 ID=Msa0043300-mRNA-1:exon:25085;Parent=Msa0043300-mRNA-1
chr1_1 five_prime_UTR 74439285 74439438 74439285 ID=Msa0043300-mRNA-1:five_prime_utr;Parent=Msa0043300-mRNA-1
chr1_1 CDS 74439192 74439284 74439192 ID=Msa0043300-mRNA-1:cds;Parent=Msa0043300-mRNA-1
chr1_1 CDS 74438910 74439115 74438910 ID=Msa0043300-mRNA-1:cds;Parent=Msa0043300-mRNA-1
chr1_1 CDS 74438222 74438232 74438222 ID=Msa0043300-mRNA-1:cds;Parent=Msa0043300-mRNA-1
chr1_1 CDS 74437309 74437574 74437309 ID=Msa0043300-mRNA-1:cds;Parent=Msa0043300-mRNA-1
Gene Sequence

>Msa0043300

ATGGCTGTGTCTGTAACAATTATAGTCCTTATCATTTCTCTTCATCTCTTAGCTTTCGTTTTTGCTATAGGCGCTGAACGACGTCGTAGTGAGGCCAAAGTGGTTCCTGATGAGTACGATGACCGAACTTTCTGTGTTTACACCACCGACGCTTCCACTGTCTACGGTGTTGCTGCTTTCTCTCTCCTGCTTCTTAGTCAAACTGTTCTTAACGCCGTCACTAGATGTCTTTGCTGTGGTAAAGGTCTCATCTCTGGTTGTTCTACCACTTGCGCTGTCATCTTCTTCATTCTCTCATGGATCGCTGGAGCAGAGGCGTGCTTGTTAGCAGGCTCTGCTAGGAATGCCTACCACACAAAGTACCGAGGGAATTTTGTGACACACGACTTGTCTTGCGCTACACTTCGCAAAGGTGTGTTTGCTGCTGGGGCTGCCTTGACCTTGTTCTCTATGTTGGCTTCTATTTTGTACTATTGGGCACACGCCAAGGCTGACACTGGTTTCTGGGAGAAGCACCAAAATGAAGGCATTGGATTGGCCACACACAATCACGGTCCTGAATCTGATAGGCCCTGA
Protein sequence

>Msa0043300

MAVSVTIIVLIISLHLLAFVFAIGAERRRSEAKVVPDEYDDRTFCVYTTDASTVYGVAAFSLLLLSQTVLNAVTRCLCCGKGLISGCSTTCAVIFFILSWIAGAEACLLAGSARNAYHTKYRGNFVTHDLSCATLRKGVFAAGAALTLFSMLASILYYWAHAKADTGFWEKHQNEGIGLATHNHGPESDRP*