AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0044200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044200 MtrunA17_Chr1g0210821 96.374 524 12 3 4 526 54 571 0.0 1019
Msa0044200 MtrunA17_Chr1g0162971 57.975 395 110 15 4 388 51 399 4.26e-131 389
Msa0044200 MtrunA17_Chr1g0199101 48.692 497 194 14 4 482 57 510 2.96e-125 377
Msa0044200 MtrunA17_Chr1g0163001 45.572 542 176 19 5 500 54 522 1.80e-123 372
Msa0044200 MtrunA17_Chr4g0040571 45.253 495 203 17 4 475 49 498 2.48e-108 332
Msa0044200 MtrunA17_Chr2g0330171 89.542 153 16 0 4 156 56 208 3.31e-105 323
Msa0044200 MtrunA17_Chr8g0342421 88.889 153 17 0 4 156 72 224 5.18e-105 324
Msa0044200 MtrunA17_Chr7g0263941 87.582 153 19 0 4 156 44 196 2.42e-104 318
Msa0044200 MtrunA17_Chr1g0181381 83.851 161 25 1 4 163 48 208 4.26e-102 316
Msa0044200 MtrunA17_Chr7g0268961 83.871 155 25 0 2 156 30 184 8.91e-102 315
Msa0044200 MtrunA17_Chr8g0373541 84.667 150 23 0 4 153 43 192 2.35e-100 312
Msa0044200 MtrunA17_Chr1g0185121 47.849 372 102 10 4 366 50 338 9.08e-100 308
Msa0044200 MtrunA17_Chr1g0191991 85.333 150 22 0 4 153 73 222 2.50e-99 310
Msa0044200 MtrunA17_Chr4g0029521 75.294 170 39 2 4 170 48 217 5.44e-97 303
Msa0044200 MtrunA17_Chr1g0151351 82.119 151 26 1 4 153 51 201 2.68e-95 297
Msa0044200 MtrunA17_Chr2g0326381 81.169 154 28 1 4 156 42 195 2.13e-94 293
Msa0044200 MtrunA17_Chr3g0141431 75.676 148 35 1 4 150 32 179 2.04e-86 272
Msa0044200 MtrunA17_Chr2g0324991 83.206 131 22 0 5 135 3 133 5.29e-86 262
Msa0044200 MtrunA17_Chr8g0375521 52.020 198 93 2 4 199 37 234 1.10e-70 232
Msa0044200 MtrunA17_Chr6g0479921 54.749 179 76 2 4 177 39 217 2.12e-68 227
Msa0044200 MtrunA17_Chr1g0200421 35.762 151 85 4 8 146 236 386 2.80e-24 106
Msa0044200 MtrunA17_Chr3g0123941 29.843 191 120 5 4 186 118 302 5.98e-22 97.1
Msa0044200 MtrunA17_Chr2g0320341 34.868 152 85 4 6 143 227 378 1.70e-21 96.7
Msa0044200 MtrunA17_Chr5g0422571 35.417 144 82 4 15 148 106 248 1.31e-19 89.4
Msa0044200 MtrunA17_Chr8g0352011 36.301 146 83 5 10 146 166 310 1.33e-19 90.1
Msa0044200 MtrunA17_Chr7g0258011 33.540 161 89 6 10 153 176 335 4.33e-19 89.0
Msa0044200 MtrunA17_Chr1g0198651 35.862 145 78 5 15 146 107 249 8.01e-19 87.0
Msa0044200 MtrunA17_Chr4g0053341 33.775 151 90 4 5 146 69 218 1.53e-18 85.1
Msa0044200 MtrunA17_Chr8g0382121 31.757 148 90 5 7 143 109 256 2.12e-18 86.3
Msa0044200 MtrunA17_Chr1g0173841 34.932 146 85 5 10 146 215 359 2.48e-18 87.0
Msa0044200 MtrunA17_Chr2g0328921 33.562 146 87 5 10 146 138 282 1.03e-17 84.3
Msa0044200 MtrunA17_Chr2g0321291 34.694 147 84 5 10 146 133 277 2.38e-17 83.2
Msa0044200 MtrunA17_Chr4g0026521 34.014 147 85 5 10 146 118 262 4.67e-17 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044200 AT2G02070.2 48.411 535 151 20 6 472 64 541 6.60e-125 378
Msa0044200 AT2G02070.1 48.411 535 151 20 6 472 64 541 6.60e-125 378
Msa0044200 AT2G02080.1 46.764 479 170 14 4 463 64 476 1.27e-120 364
Msa0044200 AT2G02080.4 46.764 479 170 14 4 463 64 476 1.27e-120 364
Msa0044200 AT2G02080.5 46.764 479 170 14 4 463 64 476 1.27e-120 364
Msa0044200 AT2G02080.3 46.764 479 170 14 4 463 64 476 1.27e-120 364
Msa0044200 AT2G02080.6 45.591 465 168 14 18 463 1 399 8.98e-112 339
Msa0044200 AT2G02080.2 45.591 465 168 14 18 463 1 399 8.98e-112 339
Msa0044200 AT1G14580.1 86.335 161 22 0 4 164 63 223 5.60e-107 328
Msa0044200 AT1G14580.2 86.335 161 22 0 4 164 63 223 5.60e-107 328
Msa0044200 AT1G14580.3 86.335 161 22 0 4 164 77 237 1.03e-106 328
Msa0044200 AT5G66730.1 42.373 472 210 10 4 466 42 460 1.44e-105 325
Msa0044200 AT1G03840.1 44.969 487 220 15 4 475 51 504 8.61e-105 323
Msa0044200 AT1G03840.2 44.764 487 221 15 4 475 49 502 5.38e-104 321
Msa0044200 AT5G44160.2 43.125 480 209 13 1 475 5 425 8.15e-104 318
Msa0044200 AT5G44160.1 43.396 477 206 13 4 475 47 464 3.18e-103 318
Msa0044200 AT3G50700.1 85.621 153 22 0 4 156 44 196 2.91e-102 315
Msa0044200 AT3G45260.2 86.364 154 20 1 4 156 49 202 4.09e-99 307
Msa0044200 AT3G45260.1 86.364 154 20 1 4 156 49 202 4.09e-99 307
Msa0044200 AT5G03150.1 83.019 159 26 1 4 161 63 221 2.55e-98 306
Msa0044200 AT3G13810.6 83.544 158 25 1 4 160 61 218 1.01e-97 305
Msa0044200 AT1G55110.3 83.439 157 25 1 4 159 73 229 1.08e-97 303
Msa0044200 AT1G55110.1 83.439 157 25 1 4 159 73 229 1.08e-97 303
Msa0044200 AT1G55110.2 83.439 157 25 1 4 159 73 229 1.08e-97 303
Msa0044200 AT3G13810.4 83.544 158 25 1 4 160 80 237 1.29e-97 305
Msa0044200 AT3G13810.1 83.544 158 25 1 4 160 80 237 1.29e-97 305
Msa0044200 AT3G13810.5 83.544 158 25 1 4 160 75 232 1.33e-97 305
Msa0044200 AT4G02670.2 83.766 154 24 1 4 156 65 218 3.70e-97 300
Msa0044200 AT4G02670.1 83.766 154 24 1 4 156 63 216 3.96e-97 300
Msa0044200 AT3G13810.2 83.439 157 25 1 5 160 82 238 5.47e-97 303
Msa0044200 AT3G13810.3 83.439 157 25 1 5 160 68 224 5.89e-97 303
Msa0044200 AT5G60470.3 81.169 154 28 1 4 156 50 203 3.79e-95 297
Msa0044200 AT5G60470.2 81.169 154 28 1 4 156 54 207 4.08e-95 297
Msa0044200 AT5G60470.1 78.981 157 32 1 1 156 42 198 7.01e-95 296
Msa0044200 AT2G01940.1 60.366 164 61 3 4 163 54 217 1.49e-69 230
Msa0044200 AT1G25250.1 62.162 148 53 2 3 147 19 166 2.74e-68 224
Msa0044200 AT1G25250.3 61.905 147 53 2 4 147 43 189 2.04e-67 223
Msa0044200 AT1G68130.1 62.329 146 53 2 4 147 51 196 3.33e-67 223
Msa0044200 AT2G01940.3 59.639 166 60 5 4 163 54 218 6.16e-66 220
Msa0044200 AT2G01940.2 57.812 128 50 3 40 163 1 128 6.87e-46 164
Msa0044200 AT1G68130.2 61.818 110 40 2 40 147 1 110 1.66e-44 160
Msa0044200 AT1G25250.2 60.360 111 41 2 40 147 1 111 8.73e-44 157
Msa0044200 AT1G34370.3 33.987 153 87 3 8 146 19 171 2.17e-23 100
Msa0044200 AT1G34370.2 33.987 153 87 3 8 146 229 381 3.19e-23 103
Msa0044200 AT1G34370.1 33.987 153 87 3 8 146 229 381 3.19e-23 103
Msa0044200 AT5G22890.1 31.737 167 99 5 8 159 202 368 1.45e-21 97.1
Msa0044200 AT1G13290.1 35.570 149 82 6 15 151 93 239 2.71e-18 86.3
Msa0044200 AT1G51220.1 32.877 146 88 5 10 146 165 309 3.88e-18 86.3
Msa0044200 AT3G57670.1 34.247 146 86 5 10 146 204 348 3.98e-18 86.7
Msa0044200 AT3G20880.1 33.562 146 87 5 10 146 243 387 7.29e-18 86.3
Msa0044200 AT1G34790.1 35.333 150 85 6 7 146 129 276 1.36e-17 84.0
Msa0044200 AT1G08290.1 36.765 136 73 6 22 146 179 312 1.83e-16 81.3

Find 138 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCTGTTTGTTGCCATTA+GGG 0.258326 1_1:+75703385 None:intergenic
AAGAAGCTTCAATAAAATTC+AGG 0.266894 1_1:+75696917 None:intergenic
ACTTGATCTAATTAAAGATT+TGG 0.270733 1_1:-75696968 Msa0044200:three_prime_UTR
GTTTGTTGCCATTAGGGTCT+TGG 0.290354 1_1:+75703391 None:intergenic
GATCATGAGGAACAAAGTTT+TGG 0.296420 1_1:+75699873 None:intergenic
AGAGGAGGTGCTGGTGGTGG+TGG 0.298307 1_1:-75699077 Msa0044200:CDS
ATGGCACCAGTTAGAGAAAT+TGG 0.304925 1_1:+75700136 None:intergenic
AGCATCATCTTCCTACTAAA+AGG 0.316308 1_1:-75699030 Msa0044200:intron
TGGGCATTTGTGCAGCTACC+TGG 0.317019 1_1:+75700056 None:intergenic
GGAGGTGCTGGTGGTGGTGG+TGG 0.324790 1_1:-75699074 Msa0044200:CDS
TAAACCTGTTTGTTGCCATT+AGG 0.329788 1_1:+75703384 None:intergenic
TAATGTTACTGTTTCCTCCT+TGG 0.332632 1_1:+75699639 None:intergenic
CAAAGTGGAGGAGGAGGAGG+AGG 0.344709 1_1:-75699320 Msa0044200:CDS
GCCATTGGATCTCATCTCTA+TGG 0.345561 1_1:-75700118 Msa0044200:CDS
AATGTTACTGTTTCCTCCTT+GGG 0.349156 1_1:+75699640 None:intergenic
GCAAGTAACTCAGCATCTTC+TGG 0.352752 1_1:-75699479 Msa0044200:CDS
ACTTCTCTTCTCAAAAGCTT+TGG 0.354902 1_1:-75699515 Msa0044200:CDS
TTTGTTGCCATTAGGGTCTT+GGG 0.357166 1_1:+75703392 None:intergenic
TCTTGTTGTTGTTGCATGTT+GGG 0.364031 1_1:+75700037 None:intergenic
CACAGATAAACCTTTCTCTT+AGG 0.370336 1_1:+75703257 None:intergenic
TCTTCAGAAAGCTGCTCAAA+TGG 0.372700 1_1:-75699573 Msa0044200:CDS
GGTGGTGGAAGTGGGAACTA+TGG 0.381676 1_1:-75699428 Msa0044200:CDS
GAAGGAACAAATTTCTTCAA+TGG 0.382802 1_1:-75699710 Msa0044200:CDS
GGAAGTGGGAACTATGGTTT+TGG 0.392846 1_1:-75699422 Msa0044200:CDS
GCAGCCGCCGCCAATCGGAC+CGG 0.393198 1_1:-75699974 Msa0044200:CDS
CATCATTAAACCTTGTTGTT+GGG 0.395369 1_1:+75699847 None:intergenic
AGTGGTGTTGTTGGAGGAGG+AGG 0.395753 1_1:-75699200 Msa0044200:CDS
CTGTTACTTGAAAGGAAATT+CGG 0.396306 1_1:+75699782 None:intergenic
GCAAACATGGTGAGAAGAAA+TGG 0.396336 1_1:-75703157 Msa0044200:CDS
GCATCATTAAACCTTGTTGT+TGG 0.396925 1_1:+75699846 None:intergenic
GGTGTAGGGCTTGGAAGAGG+AGG 0.397969 1_1:-75699287 Msa0044200:CDS
CAGCCACCAATTTCTCTAAC+TGG 0.400711 1_1:-75700142 Msa0044200:CDS
AGTGCTATCACCTCTGCATC+TGG 0.401274 1_1:+75703419 None:intergenic
AGAGAAATTGGTGGCTGTCT+TGG 0.401882 1_1:+75700148 None:intergenic
GGAAGAGGAGGTGCTGGTGG+TGG 0.401937 1_1:-75699080 Msa0044200:CDS
AAAAGCTTTGGAAACAATAC+TGG 0.403135 1_1:-75699503 Msa0044200:CDS
GATCAAAGTGGAGGAGGAGG+AGG 0.417269 1_1:-75699323 Msa0044200:CDS
TGATCCTAGCAGAGTGCAAA+TGG 0.420116 1_1:-75699450 Msa0044200:CDS
AGAGGAGGAAGAGGAGGTGC+TGG 0.422454 1_1:-75699086 Msa0044200:CDS
CAGCCGCCGCCAATCGGACC+GGG 0.427027 1_1:-75699973 Msa0044200:CDS
GTCGAATTGCCCGGTCCGAT+TGG 0.429459 1_1:+75699964 None:intergenic
GTCTTGTTGTTGTTGCATGT+TGG 0.430394 1_1:+75700036 None:intergenic
GGTGTTGTTGGAGGAGGAGG+AGG 0.431211 1_1:-75699197 Msa0044200:CDS
AATGCTGCACAATCATTTAG+AGG 0.432993 1_1:-75699104 Msa0044200:CDS
TCGGCGCAGCCGCCGCCAAT+CGG 0.440183 1_1:-75699979 Msa0044200:CDS
TCATGAACAGAGTAACTTGC+AGG 0.442583 1_1:-75699390 Msa0044200:CDS
GCGTTCATCATGACCCTTCA+AGG 0.451309 1_1:-75703220 Msa0044200:CDS
GTGCAAATGGGTGGTGGAAG+TGG 0.451777 1_1:-75699437 Msa0044200:CDS
AGGGCACTTGGTGACCTCAC+TGG 0.452289 1_1:-75703200 Msa0044200:CDS
AATTTCTTCAATGGATCAGC+TGG 0.456222 1_1:-75699701 Msa0044200:CDS
CAGAGCCTTCTGTGATGCAT+TGG 0.460268 1_1:-75700182 Msa0044200:CDS
TTTGATCAAAGTGGAGGAGG+AGG 0.461762 1_1:-75699326 Msa0044200:CDS
CCAATAACAAAATCTATAAC+CGG 0.463076 1_1:+75696769 None:intergenic
AGTATGCTGTTCAATCTGAT+TGG 0.466037 1_1:-75703112 Msa0044200:CDS
ATTTCTCTAACTGGTGCCAT+TGG 0.468145 1_1:-75700133 Msa0044200:CDS
CTGTGATGCATTGGCTCAAG+AGG 0.473610 1_1:-75700173 Msa0044200:CDS
CGTTAGGTCTGAAAGTAGCC+TGG 0.474282 1_1:+75699927 None:intergenic
GTAGGGCTTGGAAGAGGAGG+TGG 0.476945 1_1:-75699284 Msa0044200:CDS
CTTCAGAAAGCTGCTCAAAT+GGG 0.479620 1_1:-75699572 Msa0044200:CDS
TTTGTGAGGTATGCAACAAA+GGG 0.479716 1_1:-75703361 Msa0044200:CDS
ATGAATGTTATTGTTGAAGA+AGG 0.481652 1_1:+75699904 None:intergenic
ACTATCTCCCAAGACCCTAA+TGG 0.482980 1_1:-75703399 Msa0044200:CDS
AGAAGCATGAGTGGTGTTGT+TGG 0.483138 1_1:-75699209 Msa0044200:CDS
GCAACTTCAAGTAATGGAAA+TGG 0.483733 1_1:-75699548 Msa0044200:CDS
GATTGCTGTTGTTGCTATTG+TGG 0.486706 1_1:+75699816 None:intergenic
AGACCCTAATGGCAACAAAC+AGG 0.487796 1_1:-75703388 Msa0044200:CDS
GGAGGAAGAGGAGGTGCTGG+TGG 0.490280 1_1:-75699083 Msa0044200:CDS
TGATGAACGCATGTGGGCTC+AGG 0.492840 1_1:+75703233 None:intergenic
CATGTGGTGGTCGAATTGCC+CGG 0.492902 1_1:+75699955 None:intergenic
TACAAAAGAGCCTAAGAGAA+AGG 0.500506 1_1:-75703267 Msa0044200:CDS
ACAGTCACACCTATATTCTC+TGG 0.503404 1_1:+75703064 None:intergenic
AACAGTAACATTAATGCTGC+TGG 0.504605 1_1:-75699629 Msa0044200:CDS
ATTAAACCTTGTTGTTGGGA+AGG 0.505891 1_1:+75699851 None:intergenic
GGGCACTTGGTGACCTCACT+GGG 0.506772 1_1:-75703199 Msa0044200:CDS
TTATTGTTGAAGAAGGCGTT+AGG 0.509288 1_1:+75699911 None:intergenic
ATGGGTGCAACTTCAAGTAA+TGG 0.513566 1_1:-75699554 Msa0044200:CDS
TGTTAGTACTGTTACTTGAA+AGG 0.514803 1_1:+75699774 None:intergenic
CATGACCCTTCAAGGGCACT+TGG 0.515364 1_1:-75703212 Msa0044200:CDS
GGTGGTGGTGGTGGAGCAGG+AGG 0.516281 1_1:-75699065 Msa0044200:CDS
CAATCATTTAGAGGAGGAAG+AGG 0.517987 1_1:-75699095 Msa0044200:CDS
GAAGAGGACACAACTTGCCT+TGG 0.519873 1_1:-75703307 Msa0044200:CDS
GGGCATTTGTGCAGCTACCT+GGG 0.522215 1_1:+75700057 None:intergenic
AGCAGAGTGCAAATGGGTGG+TGG 0.522557 1_1:-75699443 Msa0044200:CDS
GTCTTCTGCTTAAGCTTCCA+AGG 0.523295 1_1:+75703290 None:intergenic
AACAAACAGGTTTATTTGTG+AGG 0.525054 1_1:-75703375 Msa0044200:CDS
GAATTGCCCGGTCCGATTGG+CGG 0.525454 1_1:+75699967 None:intergenic
AGCATGAGTGGTGTTGTTGG+AGG 0.531782 1_1:-75699206 Msa0044200:CDS
AGAGCACAACGATGCATATG+TGG 0.532032 1_1:-75696945 Msa0044200:three_prime_UTR
AACTTGGCAGCTTCTTTGGA+AGG 0.532879 1_1:-75699146 Msa0044200:CDS
CTGGGCTATGCTTAGACCCA+TGG 0.532898 1_1:+75700075 None:intergenic
TTGCCCGGTCCGATTGGCGG+CGG 0.533309 1_1:+75699970 None:intergenic
ATGAGTGGTGTTGTTGGAGG+AGG 0.534700 1_1:-75699203 Msa0044200:CDS
ACTGTGGCACTCTCTTCTCC+AGG 0.535575 1_1:-75703046 Msa0044200:intron
ATTTGTGAGGTATGCAACAA+AGG 0.537155 1_1:-75703362 Msa0044200:CDS
CCACCCATTTGCACTCTGCT+AGG 0.537342 1_1:+75699446 None:intergenic
TGCTGTTCAATCTGATTGGA+AGG 0.548901 1_1:-75703108 Msa0044200:CDS
AAAACATTGCTGAAGAGTGA+TGG 0.549747 1_1:+75699665 None:intergenic
ATATTTGATCAAAGTGGAGG+AGG 0.551599 1_1:-75699329 Msa0044200:CDS
CACTTGAATGTGAATAATGA+AGG 0.553613 1_1:-75699728 Msa0044200:CDS
AACTCAGCATCTTCTGGTGG+CGG 0.555348 1_1:-75699473 Msa0044200:CDS
GTCCTCTTCTGTGAAGCTGT+AGG 0.557568 1_1:+75703321 None:intergenic
ACTTCAATATTTGATCAAAG+TGG 0.557815 1_1:-75699335 Msa0044200:CDS
TGCAAATGGGTGGTGGAAGT+GGG 0.558745 1_1:-75699436 Msa0044200:CDS
AACCTACAGCTTCACAGAAG+AGG 0.559175 1_1:-75703323 Msa0044200:CDS
AGGTCACCAAGTGCCCTTGA+AGG 0.560455 1_1:+75703206 None:intergenic
GTTAGGTCTGAAAGTAGCCT+GGG 0.562635 1_1:+75699928 None:intergenic
CAGTAGCTGAATTGCTGTGG+TGG 0.574152 1_1:+75700014 None:intergenic
AAACACTACTCTCGCAAACA+TGG 0.582241 1_1:-75703170 Msa0044200:CDS
TGTGATGCATTGGCTCAAGA+GGG 0.582830 1_1:-75700172 Msa0044200:CDS
CATGATCCTTCCCAACAACA+AGG 0.585888 1_1:-75699857 Msa0044200:CDS
TCAATATTTGATCAAAGTGG+AGG 0.596270 1_1:-75699332 Msa0044200:CDS
TCATTTAGAGGAGGAAGAGG+AGG 0.597999 1_1:-75699092 Msa0044200:CDS
CTTGTGGCACCAGAGAATAT+AGG 0.598109 1_1:-75703073 Msa0044200:CDS
GATCCTAGCAGAGTGCAAAT+GGG 0.599256 1_1:-75699449 Msa0044200:CDS
TTGAGCCAATGCATCACAGA+AGG 0.600273 1_1:+75700177 None:intergenic
CATGGGTCTAAGCATAGCCC+AGG 0.603094 1_1:-75700074 Msa0044200:CDS
TCCATAGAGATGAGATCCAA+TGG 0.603687 1_1:+75700117 None:intergenic
GGTCACCAAGTGCCCTTGAA+GGG 0.610749 1_1:+75703207 None:intergenic
CGTTCATCATGACCCTTCAA+GGG 0.615083 1_1:-75703219 Msa0044200:CDS
GGAAACAGATCCAGATGCAG+AGG 0.628242 1_1:-75703429 Msa0044200:CDS
GCTACTGAAATCTTGAGACT+CGG 0.628908 1_1:-75699998 Msa0044200:CDS
TCAAGCAACAACAACACCAT+GGG 0.629958 1_1:-75700091 Msa0044200:CDS
GCACCAGTTAGAGAAATTGG+TGG 0.631481 1_1:+75700139 None:intergenic
AAGGCACATTCTAAGACTTG+TGG 0.632080 1_1:-75703089 Msa0044200:CDS
CTCAAGCAACAACAACACCA+TGG 0.635294 1_1:-75700092 Msa0044200:CDS
GAGCACAACGATGCATATGT+GGG 0.639943 1_1:-75696944 Msa0044200:three_prime_UTR
TGTTGTTGGGAAGGATCATG+AGG 0.647582 1_1:+75699860 None:intergenic
AGGGTCATGATGAACGCATG+TGG 0.655416 1_1:+75703226 None:intergenic
GAGATTGTGAGAAGCATGAG+TGG 0.666823 1_1:-75699218 Msa0044200:CDS
AGTAACTCAGCATCTTCTGG+TGG 0.670356 1_1:-75699476 Msa0044200:CDS
GCTGCACAATCATTTAGAGG+AGG 0.673513 1_1:-75699101 Msa0044200:CDS
GGGTCATGATGAACGCATGT+GGG 0.680517 1_1:+75703227 None:intergenic
TTAGGTCTGAAAGTAGCCTG+GGG 0.680570 1_1:+75699929 None:intergenic
AGAGAATATAGGTGTGACTG+TGG 0.696795 1_1:-75703062 Msa0044200:CDS
TTTCAGTAGCTGAATTGCTG+TGG 0.697116 1_1:+75700011 None:intergenic
CCTAGCAGAGTGCAAATGGG+TGG 0.714810 1_1:-75699446 Msa0044200:CDS
AGTGTTTCTTAATCCCAGTG+AGG 0.718099 1_1:+75703186 None:intergenic
TAGGTCTGAAAGTAGCCTGG+GGG 0.734494 1_1:+75699930 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATACTATATAATTAGA+AGG + chr1_1:75699452-75699471 None:intergenic 10.0%
!!! ATAGTATTTTATTTTTTATG+AGG - chr1_1:75699461-75699480 Msa0044200:CDS 10.0%
!! TTAAGTCTATTAAAAAAAAA+TGG - chr1_1:75699657-75699676 Msa0044200:CDS 10.0%
!!! GTTTTTAAAATACTATTTTA+AGG - chr1_1:75701587-75701606 Msa0044200:intron 10.0%
!!! TAAAAATATTTTTATGATTG+AGG + chr1_1:75702022-75702041 None:intergenic 10.0%
!!! AATCATAAAAATATTTTTAC+TGG - chr1_1:75702023-75702042 Msa0044200:intron 10.0%
!!! TTCTTTTTTTGATATATATT+TGG - chr1_1:75702449-75702468 Msa0044200:intron 10.0%
!!! ATTTTATTTTATTTTTTTGG+GGG + chr1_1:75703297-75703316 None:intergenic 10.0%
!!! TTTTGTGAATGAAAAATAAT+GGG + chr1_1:75698168-75698187 None:intergenic 15.0%
!!! GCATAAAATTTTGATTAAAT+TGG + chr1_1:75698291-75698310 None:intergenic 15.0%
!! TAAGAATATATTCAATGTTA+AGG + chr1_1:75698607-75698626 None:intergenic 15.0%
!!! ATCAACATTTTCTTATAATA+AGG + chr1_1:75698672-75698691 None:intergenic 15.0%
!!! TAAGAAAATGTTGATTTTTT+AGG - chr1_1:75698677-75698696 Msa0044200:intron 15.0%
!!! AATAAATTTGTTGAAAATGA+TGG + chr1_1:75699187-75699206 None:intergenic 15.0%
!!! TCTACAATTTTAACAAATTT+TGG - chr1_1:75701492-75701511 Msa0044200:intron 15.0%
!!! GTAAATACTCTTTTATATAT+TGG - chr1_1:75701788-75701807 Msa0044200:intron 15.0%
!!! TAATACTAATTTAGTTTAGA+AGG + chr1_1:75702170-75702189 None:intergenic 15.0%
!! TTGAAAATGAAACTTATATT+AGG - chr1_1:75702260-75702279 Msa0044200:intron 15.0%
!! AAGAAAGTAAAAAATTGAAA+AGG + chr1_1:75702434-75702453 None:intergenic 15.0%
!!! TTTTTTGATATATATTTGGT+TGG - chr1_1:75702453-75702472 Msa0044200:intron 15.0%
!!! TTTTCTATGTTACTATATTT+GGG - chr1_1:75702658-75702677 Msa0044200:intron 15.0%
!!! TTAATTAGATCAAGTTTTAA+TGG + chr1_1:75703195-75703214 None:intergenic 15.0%
!!! ATTTTATTAGATTTTGCTAT+TGG - chr1_1:75703352-75703371 Msa0044200:CDS 15.0%
!! AAATAACTGTTTGACAAAAA+TGG + chr1_1:75697334-75697353 None:intergenic 20.0%
!! TCTTTATTATCTAGTGAATT+TGG - chr1_1:75697472-75697491 Msa0044200:intron 20.0%
!!! TTGATTTGATTAAGATTCTA+TGG - chr1_1:75697541-75697560 Msa0044200:intron 20.0%
!!! TGTTTCAATATTTGTTAGTA+CGG - chr1_1:75697587-75697606 Msa0044200:intron 20.0%
!! GTATAATTATGAGACTTATA+AGG + chr1_1:75697711-75697730 None:intergenic 20.0%
!!! ATGGTTTTTGAAGTTTATTT+TGG - chr1_1:75698053-75698072 Msa0044200:intron 20.0%
!!! GTTTTGTGAATGAAAAATAA+TGG + chr1_1:75698169-75698188 None:intergenic 20.0%
!! AAGAAACACTAAAATTATGT+TGG + chr1_1:75698240-75698259 None:intergenic 20.0%
!! TTATATGTTTGAAGAATGAA+TGG - chr1_1:75698261-75698280 Msa0044200:intron 20.0%
!! TATATGTTTGAAGAATGAAT+GGG - chr1_1:75698262-75698281 Msa0044200:intron 20.0%
!!! TTGAATCGTATGATTTTAAT+TGG - chr1_1:75698413-75698432 Msa0044200:intron 20.0%
!!! TAAGAAACAATTGACTTTTT+TGG + chr1_1:75698766-75698785 None:intergenic 20.0%
!!! GTCAATTGTTTCTTATAATA+AGG - chr1_1:75698771-75698790 Msa0044200:intron 20.0%
!!! TTATTGTCTTTTACTTGAAA+AGG - chr1_1:75699064-75699083 Msa0044200:CDS 20.0%
!! TAGTAATCTATGTATAATTC+AGG - chr1_1:75699101-75699120 Msa0044200:CDS 20.0%
!!! TTTACTTTTTAGGATAAAAC+TGG + chr1_1:75699603-75699622 None:intergenic 20.0%
!! TAACTAGGTATAATAATAGT+TGG + chr1_1:75699828-75699847 None:intergenic 20.0%
!! ACAAGAAAAAATTGTATGAA+AGG + chr1_1:75699860-75699879 None:intergenic 20.0%
!!! CTTTTCTATGTTACTATATT+TGG - chr1_1:75702657-75702676 Msa0044200:intron 20.0%
!! TTTCTATGTTACTATATTTG+GGG - chr1_1:75702659-75702678 Msa0044200:intron 20.0%
!!! TAGCTTAATTTTATCTAATC+AGG - chr1_1:75702691-75702710 Msa0044200:intron 20.0%
!!! TAACCATGTAATTTTTGAAA+CGG - chr1_1:75703116-75703135 Msa0044200:CDS 20.0%
!! ACTTGATCTAATTAAAGATT+TGG - chr1_1:75703200-75703219 Msa0044200:CDS 20.0%
!!! TATTAGTTTCAAGATTTTCA+TGG - chr1_1:75703326-75703345 Msa0044200:CDS 20.0%
!!! GGATATTTTAATTTAACTAC+CGG - chr1_1:75703380-75703399 Msa0044200:CDS 20.0%
! GAATTGTTATATATGTTACC+TGG + chr1_1:75697143-75697162 None:intergenic 25.0%
!!! ACACACATGTTTTGTTAATA+TGG - chr1_1:75697195-75697214 Msa0044200:intron 25.0%
!!! TATTTTTTTCAACCACGAAA+TGG - chr1_1:75697349-75697368 Msa0044200:intron 25.0%
!!! ATTTTTTTCAACCACGAAAT+GGG - chr1_1:75697350-75697369 Msa0044200:intron 25.0%
! TATTATCTAGTGAATTTGGT+TGG - chr1_1:75697476-75697495 Msa0044200:intron 25.0%
!! TGATTAAGATTCTATGGTTT+TGG - chr1_1:75697547-75697566 Msa0044200:intron 25.0%
! AGCATAAGAGTAGAATATTA+TGG - chr1_1:75697768-75697787 Msa0044200:intron 25.0%
! GAATAGGATGAAAAAGAAAT+GGG + chr1_1:75697850-75697869 None:intergenic 25.0%
! TGAATAGGATGAAAAAGAAA+TGG + chr1_1:75697851-75697870 None:intergenic 25.0%
! AATAAACTTCAAAAACCATG+TGG + chr1_1:75698052-75698071 None:intergenic 25.0%
!!! ACTATTTTCTTGTTTCTCAT+AGG - chr1_1:75698076-75698095 Msa0044200:intron 25.0%
!!! CTCATAGGTTTTTTATAACA+TGG - chr1_1:75698091-75698110 Msa0044200:intron 25.0%
! CTCATTAAACATGATTAGAT+TGG + chr1_1:75698136-75698155 None:intergenic 25.0%
! CAATCTAATCATGTTTAATG+AGG - chr1_1:75698134-75698153 Msa0044200:intron 25.0%
!! TCAAAATTTTATGCAATCAC+CGG - chr1_1:75698297-75698316 Msa0044200:intron 25.0%
!!! TGTTAAGGAATTGATAATGT+AGG + chr1_1:75698592-75698611 None:intergenic 25.0%
!! CATTTTCTTATAATAAGGAC+CGG + chr1_1:75698667-75698686 None:intergenic 25.0%
!! TTGTTTCTTATAATAAGGAC+CGG - chr1_1:75698776-75698795 Msa0044200:intron 25.0%
! GTAATTAATTTCATTCCACT+TGG - chr1_1:75698873-75698892 Msa0044200:intron 25.0%
! AAGTATCACATTCTTTCATT+TGG - chr1_1:75699008-75699027 Msa0044200:intron 25.0%
! ATACATAGATTACTAGAAGT+GGG + chr1_1:75699096-75699115 None:intergenic 25.0%
! TATACATAGATTACTAGAAG+TGG + chr1_1:75699097-75699116 None:intergenic 25.0%
!! AAAAGCACATAAAATGTACT+AGG + chr1_1:75699279-75699298 None:intergenic 25.0%
!! TTTAATCATTAGTTTCTCAG+AGG + chr1_1:75699313-75699332 None:intergenic 25.0%
!!! TTTTTTCCTATGATTCTAGT+TGG - chr1_1:75699393-75699412 Msa0044200:CDS 25.0%
!!! TTTTTCCTATGATTCTAGTT+GGG - chr1_1:75699394-75699413 Msa0044200:CDS 25.0%
! ACTTAATTCAAATCGATATG+AGG + chr1_1:75699643-75699662 None:intergenic 25.0%
!! GAAATTGTTGTTAATAACAG+CGG - chr1_1:75699686-75699705 Msa0044200:CDS 25.0%
! ATACGAGAACAATTGTAAAA+TGG + chr1_1:75699715-75699734 None:intergenic 25.0%
! GAAAGGAAAATCATTTAACT+AGG + chr1_1:75699843-75699862 None:intergenic 25.0%
! ATGAATGTTATTGTTGAAGA+AGG + chr1_1:75700267-75700286 None:intergenic 25.0%
! ACTTCAATATTTGATCAAAG+TGG - chr1_1:75700833-75700852 Msa0044200:intron 25.0%
! ATGATTACATTGTGATTAGT+GGG - chr1_1:75701268-75701287 Msa0044200:intron 25.0%
! TAAAAAAGAGCAATGTGAAT+AGG - chr1_1:75701379-75701398 Msa0044200:intron 25.0%
! ACATTGTAAATACCTTTCAA+CGG + chr1_1:75701635-75701654 None:intergenic 25.0%
! AACAATTATGATTGATGGAA+TGG + chr1_1:75701662-75701681 None:intergenic 25.0%
! GATTCAACAATTATGATTGA+TGG + chr1_1:75701667-75701686 None:intergenic 25.0%
! GTATATACCTTAAAGTCAAA+TGG - chr1_1:75701725-75701744 Msa0044200:intron 25.0%
! AATGAGACTTATATTTAGAG+AGG - chr1_1:75701900-75701919 Msa0044200:intron 25.0%
!! AGAAATAACATTTTCCTTTG+AGG - chr1_1:75701946-75701965 Msa0044200:intron 25.0%
! ATATCTACCTTAAAGTCAAA+TGG - chr1_1:75702059-75702078 Msa0044200:intron 25.0%
! TATAATATGCATCCATCTAT+TGG - chr1_1:75702205-75702224 Msa0044200:intron 25.0%
! ATGAAACTTATATTAGGAGT+AGG - chr1_1:75702266-75702285 Msa0044200:intron 25.0%
! GTTTATTGAATTTAACACGA+AGG + chr1_1:75702619-75702638 None:intergenic 25.0%
! TATCTACGTATGATATTAGT+TGG - chr1_1:75702753-75702772 Msa0044200:intron 25.0%
! TAAATAATAGACCTAAGTAG+TGG + chr1_1:75702922-75702941 None:intergenic 25.0%
! CTTAGGTCTATTATTTAGAT+TGG - chr1_1:75702925-75702944 Msa0044200:intron 25.0%
! TTACCGTTTCAAAAATTACA+TGG + chr1_1:75703122-75703141 None:intergenic 25.0%
! GTAATTAAGAATGACGATTA+TGG - chr1_1:75703138-75703157 Msa0044200:CDS 25.0%
! AAGAAGCTTCAATAAAATTC+AGG + chr1_1:75703254-75703273 None:intergenic 25.0%
!!! TATTTTATTTTTTTGGGGGA+GGG + chr1_1:75703293-75703312 None:intergenic 25.0%
!!! TTATTTTATTTTTTTGGGGG+AGG + chr1_1:75703294-75703313 None:intergenic 25.0%
!!! TAGATTTTGCTATTGGATAA+TGG - chr1_1:75703359-75703378 Msa0044200:CDS 25.0%
! CCAATAACAAAATCTATAAC+CGG + chr1_1:75703402-75703421 None:intergenic 25.0%
AACAAACAGGTTTATTTGTG+AGG - chr1_1:75696793-75696812 Msa0044200:three_prime_UTR 30.0%
!! AATTAACAAGTGCTGAATCT+CGG - chr1_1:75697226-75697245 Msa0044200:intron 30.0%
AGAAGAAATGTGATGTTGTT+TGG - chr1_1:75697374-75697393 Msa0044200:intron 30.0%
! AAATGTGATGTTGTTTGGTT+TGG - chr1_1:75697379-75697398 Msa0044200:intron 30.0%
!! ATGTTGTTTGGTTTGGTTTA+GGG - chr1_1:75697386-75697405 Msa0044200:intron 30.0%
!!! AAGATTCTATGGTTTTGGTA+TGG - chr1_1:75697552-75697571 Msa0044200:intron 30.0%
! AATATTTGTTAGTACGGTGT+GGG - chr1_1:75697593-75697612 Msa0044200:intron 30.0%
TCACAAACAAAAAACACACA+CGG - chr1_1:75697670-75697689 Msa0044200:intron 30.0%
!! TACTCTTATGCTTTTTGACA+AGG + chr1_1:75697760-75697779 None:intergenic 30.0%
! ACCTTTTTCTGATTTTACCT+AGG - chr1_1:75697803-75697822 Msa0044200:intron 30.0%
TCCTAGGTAAAATCAGAAAA+AGG + chr1_1:75697807-75697826 None:intergenic 30.0%
!!! TACGATCTTTGTTTTCTTCT+TGG - chr1_1:75697905-75697924 Msa0044200:intron 30.0%
!!! ATCTTTGTTTTCTTCTTGGT+TGG - chr1_1:75697909-75697928 Msa0044200:intron 30.0%
GTACACAGAAAATATAGAGA+GGG + chr1_1:75698012-75698031 None:intergenic 30.0%
AGTACACAGAAAATATAGAG+AGG + chr1_1:75698013-75698032 None:intergenic 30.0%
!!! TTTTGCTTTTTTCTTCCACA+TGG - chr1_1:75698034-75698053 Msa0044200:intron 30.0%
AACCTAAAACCTTATTCACA+TGG - chr1_1:75698192-75698211 Msa0044200:intron 30.0%
! AACCATGTGAATAAGGTTTT+AGG + chr1_1:75698197-75698216 None:intergenic 30.0%
! TAAAATTATGTTGGTCTGAG+TGG + chr1_1:75698231-75698250 None:intergenic 30.0%
AATTGGTTACCTTTGATCTT+TGG - chr1_1:75698430-75698449 Msa0044200:intron 30.0%
! TTTTGCAATCCAAAGATCAA+AGG + chr1_1:75698442-75698461 None:intergenic 30.0%
! TTTGACAAGACTTTTCTCAT+TGG + chr1_1:75698488-75698507 None:intergenic 30.0%
TGTGATACTTAATTAACCCA+AGG + chr1_1:75698998-75699017 None:intergenic 30.0%
CACATGTCTTGATTTCAAAA+GGG + chr1_1:75699566-75699585 None:intergenic 30.0%
TCACATGTCTTGATTTCAAA+AGG + chr1_1:75699567-75699586 None:intergenic 30.0%
CCATTACAATAGTCATTATG+TGG + chr1_1:75699897-75699916 None:intergenic 30.0%
CCACATAATGACTATTGTAA+TGG - chr1_1:75699894-75699913 Msa0044200:CDS 30.0%
GTAAATGTGATGAATATTGC+AGG - chr1_1:75699943-75699962 Msa0044200:CDS 30.0%
!! CATCATTAAACCTTGTTGTT+GGG + chr1_1:75700324-75700343 None:intergenic 30.0%
! CTGTTACTTGAAAGGAAATT+CGG + chr1_1:75700389-75700408 None:intergenic 30.0%
! TGTTAGTACTGTTACTTGAA+AGG + chr1_1:75700397-75700416 None:intergenic 30.0%
CACTTGAATGTGAATAATGA+AGG - chr1_1:75700440-75700459 Msa0044200:intron 30.0%
GAAGGAACAAATTTCTTCAA+TGG - chr1_1:75700458-75700477 Msa0044200:intron 30.0%
!! AAAAGCTTTGGAAACAATAC+TGG - chr1_1:75700665-75700684 Msa0044200:intron 30.0%
TCAATATTTGATCAAAGTGG+AGG - chr1_1:75700836-75700855 Msa0044200:intron 30.0%
TCAATTACCTATAGTAACCT+AGG - chr1_1:75701194-75701213 Msa0044200:intron 30.0%
TAACATTCCTAGGTTACTAT+AGG + chr1_1:75701204-75701223 None:intergenic 30.0%
GTAAAACATGTAACATTCCT+AGG + chr1_1:75701214-75701233 None:intergenic 30.0%
GTAATCATCACATGATCATA+TGG + chr1_1:75701256-75701275 None:intergenic 30.0%
GATGATTACATTGTGATTAG+TGG - chr1_1:75701267-75701286 Msa0044200:intron 30.0%
TGATTACATTGTGATTAGTG+GGG - chr1_1:75701269-75701288 Msa0044200:intron 30.0%
AATGTGAATAGGAGGAATTT+AGG - chr1_1:75701390-75701409 Msa0044200:intron 30.0%
ATGTGAATAGGAGGAATTTA+GGG - chr1_1:75701391-75701410 Msa0044200:intron 30.0%
AATTGACATTAATTCCACAC+AGG - chr1_1:75701422-75701441 Msa0044200:intron 30.0%
TATATGTAACTACCGTTGAA+AGG - chr1_1:75701620-75701639 Msa0044200:intron 30.0%
! CAATCAACCATTTGACTTTA+AGG + chr1_1:75701735-75701754 None:intergenic 30.0%
! AATAACTTGTATCCATCCAT+TGG - chr1_1:75701872-75701891 Msa0044200:intron 30.0%
TAAGTCTCATTCTAAACCAA+TGG + chr1_1:75701891-75701910 None:intergenic 30.0%
TATATGTACCTACTGTTGAA+AGG - chr1_1:75701970-75701989 Msa0044200:intron 30.0%
! CAATCAACCATTTGACTTTA+AGG + chr1_1:75701735-75701754 None:intergenic 30.0%
TCTCATTCTAAACCAATAGA+TGG + chr1_1:75702220-75702239 None:intergenic 30.0%
TTGATATATATTTGGTTGGC+TGG - chr1_1:75702457-75702476 Msa0044200:intron 30.0%
TATTTGTTCAGACACAAGTT+TGG + chr1_1:75702507-75702526 None:intergenic 30.0%
ATTTGTGTGACAAATGTATG+AGG + chr1_1:75702564-75702583 None:intergenic 30.0%
ATTGAATTTAACACGAAGGA+AGG + chr1_1:75702615-75702634 None:intergenic 30.0%
! AAAAAGAGTACAAGAGAATG+CGG + chr1_1:75702969-75702988 None:intergenic 30.0%
TAAGAATGACGATTATGGTT+TGG - chr1_1:75703143-75703162 Msa0044200:CDS 30.0%
!!! ATTTTATTTTTTTGGGGGAG+GGG + chr1_1:75703292-75703311 None:intergenic 30.0%
!! CCGGTTATAGATTTTGTTAT+TGG - chr1_1:75703399-75703418 Msa0044200:CDS 30.0%
! AAACCTGTTTGTTGCCATTA+GGG + chr1_1:75696786-75696805 None:intergenic 35.0%
! TAAACCTGTTTGTTGCCATT+AGG + chr1_1:75696787-75696806 None:intergenic 35.0%
ATTTGTGAGGTATGCAACAA+AGG - chr1_1:75696806-75696825 Msa0044200:three_prime_UTR 35.0%
TTTGTGAGGTATGCAACAAA+GGG - chr1_1:75696807-75696826 Msa0044200:three_prime_UTR 35.0%
TACAAAAGAGCCTAAGAGAA+AGG - chr1_1:75696901-75696920 Msa0044200:three_prime_UTR 35.0%
CACAGATAAACCTTTCTCTT+AGG + chr1_1:75696914-75696933 None:intergenic 35.0%
AGTATGCTGTTCAATCTGAT+TGG - chr1_1:75697056-75697075 Msa0044200:intron 35.0%
CGGTAGAATAGACTGTAATA+AGG - chr1_1:75697246-75697265 Msa0044200:intron 35.0%
!! GATGTTGTTTGGTTTGGTTT+AGG - chr1_1:75697385-75697404 Msa0044200:intron 35.0%
TTCTTCAAGTGACTATAGAG+AGG - chr1_1:75697431-75697450 Msa0044200:intron 35.0%
!!! TCTATGGTTTTGGTATGGTT+TGG - chr1_1:75697557-75697576 Msa0044200:intron 35.0%
! CAATATTTGTTAGTACGGTG+TGG - chr1_1:75697592-75697611 Msa0044200:intron 35.0%
! TTTTCAGAGATCATTCACGT+GGG + chr1_1:75697644-75697663 None:intergenic 35.0%
!! AAAATGAAGCACTGTTTCCT+AGG + chr1_1:75697823-75697842 None:intergenic 35.0%
!! GATTAGATTGGTCGTGATTT+TGG + chr1_1:75698124-75698143 None:intergenic 35.0%
GAACTTGAACCATGTGAATA+AGG + chr1_1:75698204-75698223 None:intergenic 35.0%
ACGATCACAAATCTTTCTAC+CGG + chr1_1:75698319-75698338 None:intergenic 35.0%
TTCTTATAATAAGGACCGGA+GGG + chr1_1:75698780-75698799 None:intergenic 35.0%
TTTCTTATAATAAGGACCGG+AGG + chr1_1:75698779-75698798 None:intergenic 35.0%
TTTCTTATAATAAGGACCGG+AGG - chr1_1:75698779-75698798 Msa0044200:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG - chr1_1:75698780-75698799 Msa0044200:intron 35.0%
! ACACGCAAATTTTTGTCCTT+GGG - chr1_1:75698979-75698998 Msa0044200:intron 35.0%
AATTGCCCAACTAGAATCAT+AGG + chr1_1:75699402-75699421 None:intergenic 35.0%
TCTTGATTTCAAAAGGGATG+GGG + chr1_1:75699560-75699579 None:intergenic 35.0%
GTCTTGATTTCAAAAGGGAT+GGG + chr1_1:75699561-75699580 None:intergenic 35.0%
TGTCTTGATTTCAAAAGGGA+TGG + chr1_1:75699562-75699581 None:intergenic 35.0%
!! TCTTGTTGTTGTTGCATGTT+GGG + chr1_1:75700134-75700153 None:intergenic 35.0%
!! TTATTGTTGAAGAAGGCGTT+AGG + chr1_1:75700260-75700279 None:intergenic 35.0%
!!! TGAGGAACAAAGTTTTGGTT+TGG + chr1_1:75700293-75700312 None:intergenic 35.0%
! GATCATGAGGAACAAAGTTT+TGG + chr1_1:75700298-75700317 None:intergenic 35.0%
!! ATTAAACCTTGTTGTTGGGA+AGG + chr1_1:75700320-75700339 None:intergenic 35.0%
! GCATCATTAAACCTTGTTGT+TGG + chr1_1:75700325-75700344 None:intergenic 35.0%
AATTTCTTCAATGGATCAGC+TGG - chr1_1:75700467-75700486 Msa0044200:intron 35.0%
AAAACATTGCTGAAGAGTGA+TGG + chr1_1:75700506-75700525 None:intergenic 35.0%
AATGTTACTGTTTCCTCCTT+GGG + chr1_1:75700531-75700550 None:intergenic 35.0%
TAATGTTACTGTTTCCTCCT+TGG + chr1_1:75700532-75700551 None:intergenic 35.0%
AACAGTAACATTAATGCTGC+TGG - chr1_1:75700539-75700558 Msa0044200:intron 35.0%
! GCAACTTCAAGTAATGGAAA+TGG - chr1_1:75700620-75700639 Msa0044200:intron 35.0%
ACTTCTCTTCTCAAAAGCTT+TGG - chr1_1:75700653-75700672 Msa0044200:intron 35.0%
ATATTTGATCAAAGTGGAGG+AGG - chr1_1:75700839-75700858 Msa0044200:intron 35.0%
!!! TTTTAACTTGGCAGCTTCTT+TGG - chr1_1:75701018-75701037 Msa0044200:intron 35.0%
AATGCTGCACAATCATTTAG+AGG - chr1_1:75701064-75701083 Msa0044200:intron 35.0%
AGCATCATCTTCCTACTAAA+AGG - chr1_1:75701138-75701157 Msa0044200:intron 35.0%
GATTACATTGTGATTAGTGG+GGG - chr1_1:75701270-75701289 Msa0044200:intron 35.0%
AAAAGAGCAATGTGAATAGG+AGG - chr1_1:75701382-75701401 Msa0044200:intron 35.0%
! TTTTCTTGAACAGCGGTAAA+TGG + chr1_1:75701464-75701483 None:intergenic 35.0%
!! GACAACTTTTTCTTGAACAG+CGG + chr1_1:75701471-75701490 None:intergenic 35.0%
TCTCATTCTAAACCAATGGA+TGG + chr1_1:75701887-75701906 None:intergenic 35.0%
GTAGGTACATATATCCTCAA+AGG + chr1_1:75701963-75701982 None:intergenic 35.0%
TGTAAATGCCTTTCAACAGT+AGG + chr1_1:75701981-75702000 None:intergenic 35.0%
! TGTGATAAAAAGTGTGTGTG+TGG - chr1_1:75702336-75702355 Msa0044200:intron 35.0%
AATTTAACACGAAGGAAGGA+AGG + chr1_1:75702611-75702630 None:intergenic 35.0%
TAATAAGTACTCTGCACTCA+TGG + chr1_1:75703032-75703051 None:intergenic 35.0%
!!! ATTATGGTTTGGCTTTTTGC+AGG - chr1_1:75703154-75703173 Msa0044200:CDS 35.0%
!!! TTATGGTTTGGCTTTTTGCA+GGG - chr1_1:75703155-75703174 Msa0044200:CDS 35.0%
!! GATCAAGTTTTAATGGAGCA+TGG + chr1_1:75703188-75703207 None:intergenic 35.0%
!!! TTTTATTTTTTTGGGGGAGG+GGG + chr1_1:75703291-75703310 None:intergenic 35.0%
TTTGTTGCCATTAGGGTCTT+GGG + chr1_1:75696779-75696798 None:intergenic 40.0%
AGTGTTTCTTAATCCCAGTG+AGG + chr1_1:75696985-75697004 None:intergenic 40.0%
AAACACTACTCTCGCAAACA+TGG - chr1_1:75696998-75697017 Msa0044200:intron 40.0%
GCAAACATGGTGAGAAGAAA+TGG - chr1_1:75697011-75697030 Msa0044200:intron 40.0%
TGCTGTTCAATCTGATTGGA+AGG - chr1_1:75697060-75697079 Msa0044200:intron 40.0%
!! AAGGCACATTCTAAGACTTG+TGG - chr1_1:75697079-75697098 Msa0044200:intron 40.0%
ACAGTCACACCTATATTCTC+TGG + chr1_1:75697107-75697126 None:intergenic 40.0%
AGAGAATATAGGTGTGACTG+TGG - chr1_1:75697106-75697125 Msa0044200:intron 40.0%
CACGATTGTAAGTGAGAGAA+TGG + chr1_1:75697272-75697291 None:intergenic 40.0%
CATTTCTTCTTCCCATTTCG+TGG + chr1_1:75697364-75697383 None:intergenic 40.0%
! GTTTTCAGAGATCATTCACG+TGG + chr1_1:75697645-75697664 None:intergenic 40.0%
CAAACAAAAAACACACACGG+AGG - chr1_1:75697673-75697692 Msa0044200:intron 40.0%
AACAACACCACACAACTTCA+TGG + chr1_1:75697886-75697905 None:intergenic 40.0%
!! ATGAAAAGAAGCACCTGCAA+GGG + chr1_1:75697958-75697977 None:intergenic 40.0%
! TCCACTTGGTTGTGTCTTTT+AGG - chr1_1:75698887-75698906 Msa0044200:intron 40.0%
TCCTAAAAGACACAACCAAG+TGG + chr1_1:75698891-75698910 None:intergenic 40.0%
! ACTTGGTTGTGTCTTTTAGG+AGG - chr1_1:75698890-75698909 Msa0044200:intron 40.0%
! CACACGCAAATTTTTGTCCT+TGG - chr1_1:75698978-75698997 Msa0044200:intron 40.0%
AGATTACTAGAAGTGGGACT+TGG + chr1_1:75699090-75699109 None:intergenic 40.0%
!! GAAAAAGTTGATGCCGAAAC+TGG - chr1_1:75699510-75699529 Msa0044200:CDS 40.0%
TTTCTGCAACTTGCCAGTTT+CGG + chr1_1:75699526-75699545 None:intergenic 40.0%
TTGATTTCAAAAGGGATGGG+GGG + chr1_1:75699558-75699577 None:intergenic 40.0%
CTTGATTTCAAAAGGGATGG+GGG + chr1_1:75699559-75699578 None:intergenic 40.0%
ATGGCACCAGTTAGAGAAAT+TGG + chr1_1:75700035-75700054 None:intergenic 40.0%
!! ATTTCTCTAACTGGTGCCAT+TGG - chr1_1:75700035-75700054 Msa0044200:CDS 40.0%
TCCATAGAGATGAGATCCAA+TGG + chr1_1:75700054-75700073 None:intergenic 40.0%
TCAAGCAACAACAACACCAT+GGG - chr1_1:75700077-75700096 Msa0044200:CDS 40.0%
!! GTCTTGTTGTTGTTGCATGT+TGG + chr1_1:75700135-75700154 None:intergenic 40.0%
TTTCAGTAGCTGAATTGCTG+TGG + chr1_1:75700160-75700179 None:intergenic 40.0%
GCTACTGAAATCTTGAGACT+CGG - chr1_1:75700170-75700189 Msa0044200:CDS 40.0%
! GATTGCTGTTGTTGCTATTG+TGG + chr1_1:75700355-75700374 None:intergenic 40.0%
! TTCAGCAATGTTTTCTCCCA+AGG - chr1_1:75700512-75700531 Msa0044200:intron 40.0%
TCTTCAGAAAGCTGCTCAAA+TGG - chr1_1:75700595-75700614 Msa0044200:intron 40.0%
CTTCAGAAAGCTGCTCAAAT+GGG - chr1_1:75700596-75700615 Msa0044200:intron 40.0%
ATGGGTGCAACTTCAAGTAA+TGG - chr1_1:75700614-75700633 Msa0044200:intron 40.0%
! TCATGAACAGAGTAACTTGC+AGG - chr1_1:75700778-75700797 Msa0044200:intron 40.0%
! ATGAACTCTTTTGCTGCTAC+AGG - chr1_1:75700806-75700825 Msa0044200:intron 40.0%
!! ACTCGTGACTTTTTAGGAGT+TGG - chr1_1:75700923-75700942 Msa0044200:intron 40.0%
!!! ACATGCAGCTGCTTTTAACT+TGG - chr1_1:75701006-75701025 Msa0044200:intron 40.0%
CAATCATTTAGAGGAGGAAG+AGG - chr1_1:75701073-75701092 Msa0044200:intron 40.0%
! TGACGTACGTACCTTTTAGT+AGG + chr1_1:75701152-75701171 None:intergenic 40.0%
! ATATATTTGGTTGGCTGGCA+AGG - chr1_1:75702462-75702481 Msa0044200:intron 40.0%
TGTGTGACAAATGTATGAGG+TGG + chr1_1:75702561-75702580 None:intergenic 40.0%
GAATGTATCATGCACGTATC+TGG - chr1_1:75702872-75702891 Msa0044200:intron 40.0%
TGTTCCTTTCTCCACTACTT+AGG - chr1_1:75702908-75702927 Msa0044200:intron 40.0%
! TAGACCTAAGTAGTGGAGAA+AGG + chr1_1:75702915-75702934 None:intergenic 40.0%
!!! TTTATTTTTTTGGGGGAGGG+GGG + chr1_1:75703290-75703309 None:intergenic 40.0%
ACTATCTCCCAAGACCCTAA+TGG - chr1_1:75696769-75696788 Msa0044200:three_prime_UTR 45.0%
! GTTTGTTGCCATTAGGGTCT+TGG + chr1_1:75696780-75696799 None:intergenic 45.0%
AGACCCTAATGGCAACAAAC+AGG - chr1_1:75696780-75696799 Msa0044200:three_prime_UTR 45.0%
! GCTGTAGGTTTTGCTCTCTT+TGG + chr1_1:75696835-75696854 None:intergenic 45.0%
AACCTACAGCTTCACAGAAG+AGG - chr1_1:75696845-75696864 Msa0044200:three_prime_UTR 45.0%
GTCTTCTGCTTAAGCTTCCA+AGG + chr1_1:75696881-75696900 None:intergenic 45.0%
CGTTCATCATGACCCTTCAA+GGG - chr1_1:75696949-75696968 Msa0044200:three_prime_UTR 45.0%
CTTGTGGCACCAGAGAATAT+AGG - chr1_1:75697095-75697114 Msa0044200:intron 45.0%
TACGGTGTGGGCAAATGAAA+TGG - chr1_1:75697605-75697624 Msa0044200:intron 45.0%
GTGTGGGCAAATGAAATGGA+TGG - chr1_1:75697609-75697628 Msa0044200:intron 45.0%
CAAAAAACACACACGGAGGA+AGG - chr1_1:75697677-75697696 Msa0044200:intron 45.0%
AAGGAGAGAGAAAGAGAGAG+AGG + chr1_1:75697741-75697760 None:intergenic 45.0%
TGGCATAGCAACACGTGAAT+AGG + chr1_1:75697866-75697885 None:intergenic 45.0%
TGCTATGCCATGAAGTTGTG+TGG - chr1_1:75697876-75697895 Msa0044200:intron 45.0%
!! CATGAAAAGAAGCACCTGCA+AGG + chr1_1:75697959-75697978 None:intergenic 45.0%
CTGTACAGTAGTATTCCCTC+CGG - chr1_1:75698645-75698664 Msa0044200:intron 45.0%
!! ATGTCAAGAAGTACTCCCTC+CGG + chr1_1:75698798-75698817 None:intergenic 45.0%
CTTGACATTGCAGTTCTTCG+TGG - chr1_1:75698810-75698829 Msa0044200:intron 45.0%
TTGAGCCAATGCATCACAGA+AGG + chr1_1:75699994-75700013 None:intergenic 45.0%
!! TGTGATGCATTGGCTCAAGA+GGG - chr1_1:75699996-75700015 Msa0044200:CDS 45.0%
! AGAGAAATTGGTGGCTGTCT+TGG + chr1_1:75700023-75700042 None:intergenic 45.0%
CAGCCACCAATTTCTCTAAC+TGG - chr1_1:75700026-75700045 Msa0044200:CDS 45.0%
GCACCAGTTAGAGAAATTGG+TGG + chr1_1:75700032-75700051 None:intergenic 45.0%
GCCATTGGATCTCATCTCTA+TGG - chr1_1:75700050-75700069 Msa0044200:CDS 45.0%
CTCAAGCAACAACAACACCA+TGG - chr1_1:75700076-75700095 Msa0044200:CDS 45.0%
TTAGGTCTGAAAGTAGCCTG+GGG + chr1_1:75700242-75700261 None:intergenic 45.0%
GTTAGGTCTGAAAGTAGCCT+GGG + chr1_1:75700243-75700262 None:intergenic 45.0%
TGTTGTTGGGAAGGATCATG+AGG + chr1_1:75700311-75700330 None:intergenic 45.0%
CATGATCCTTCCCAACAACA+AGG - chr1_1:75700311-75700330 Msa0044200:intron 45.0%
! AGCAATGTTTTCTCCCAAGG+AGG - chr1_1:75700515-75700534 Msa0044200:intron 45.0%
!! GCTTTTGAGAAGAGAAGTCG+CGG + chr1_1:75700651-75700670 None:intergenic 45.0%
GCAAGTAACTCAGCATCTTC+TGG - chr1_1:75700689-75700708 Msa0044200:intron 45.0%
AGTAACTCAGCATCTTCTGG+TGG - chr1_1:75700692-75700711 Msa0044200:intron 45.0%
! GGAAGTGGGAACTATGGTTT+TGG - chr1_1:75700746-75700765 Msa0044200:intron 45.0%
!!! AGTGGGAACTATGGTTTTGG+TGG - chr1_1:75700749-75700768 Msa0044200:intron 45.0%
!!! GGAACTATGGTTTTGGTGGT+GGG - chr1_1:75700753-75700772 Msa0044200:intron 45.0%
TTTGATCAAAGTGGAGGAGG+AGG - chr1_1:75700842-75700861 Msa0044200:intron 45.0%
!!! CAGCTGACTCGTGACTTTTT+AGG - chr1_1:75700917-75700936 Msa0044200:intron 45.0%
! GAGATTGTGAGAAGCATGAG+TGG - chr1_1:75700950-75700969 Msa0044200:intron 45.0%
!! AGAAGCATGAGTGGTGTTGT+TGG - chr1_1:75700959-75700978 Msa0044200:intron 45.0%
AACTTGGCAGCTTCTTTGGA+AGG - chr1_1:75701022-75701041 Msa0044200:intron 45.0%
GCTGCACAATCATTTAGAGG+AGG - chr1_1:75701067-75701086 Msa0044200:intron 45.0%
TCATTTAGAGGAGGAAGAGG+AGG - chr1_1:75701076-75701095 Msa0044200:intron 45.0%
! GAATAGGAGGAATTTAGGGC+AGG - chr1_1:75701395-75701414 Msa0044200:intron 45.0%
ATTCATTGTGTACGCCTGTG+TGG + chr1_1:75701439-75701458 None:intergenic 45.0%
GTCTGACAAGTTGTCTTGCA+TGG - chr1_1:75702358-75702377 Msa0044200:intron 45.0%
AGAGCACAACGATGCATATG+TGG - chr1_1:75703223-75703242 Msa0044200:CDS 45.0%
GAGCACAACGATGCATATGT+GGG - chr1_1:75703224-75703243 Msa0044200:CDS 45.0%
!!! AAAATTTTATTTTACTTTTT+AGG + chr1_1:75699613-75699632 None:intergenic 5.0%
!!! AATTTTATTTTATTTTTTTG+GGG + chr1_1:75703298-75703317 None:intergenic 5.0%
!!! GAATTTTATTTTATTTTTTT+GGG + chr1_1:75703299-75703318 None:intergenic 5.0%
!!! AGAATTTTATTTTATTTTTT+TGG + chr1_1:75703300-75703319 None:intergenic 5.0%
GGAAACAGATCCAGATGCAG+AGG - chr1_1:75696739-75696758 Msa0044200:three_prime_UTR 50.0%
AGTGCTATCACCTCTGCATC+TGG + chr1_1:75696752-75696771 None:intergenic 50.0%
GTCCTCTTCTGTGAAGCTGT+AGG + chr1_1:75696850-75696869 None:intergenic 50.0%
GAAGAGGACACAACTTGCCT+TGG - chr1_1:75696861-75696880 Msa0044200:three_prime_UTR 50.0%
GGGTCATGATGAACGCATGT+GGG + chr1_1:75696944-75696963 None:intergenic 50.0%
AGGGTCATGATGAACGCATG+TGG + chr1_1:75696945-75696964 None:intergenic 50.0%
GCGTTCATCATGACCCTTCA+AGG - chr1_1:75696948-75696967 Msa0044200:three_prime_UTR 50.0%
GTGTGTGTGTGTGTGTGTGA+AGG + chr1_1:75697179-75697198 None:intergenic 50.0%
TCAGAGATCATTCACGTGGG+TGG + chr1_1:75697641-75697660 None:intergenic 50.0%
CAGAGCCTTCTGTGATGCAT+TGG - chr1_1:75699986-75700005 Msa0044200:CDS 50.0%
!! CTGTGATGCATTGGCTCAAG+AGG - chr1_1:75699995-75700014 Msa0044200:CDS 50.0%
CAGTAGCTGAATTGCTGTGG+TGG + chr1_1:75700157-75700176 None:intergenic 50.0%
TAGGTCTGAAAGTAGCCTGG+GGG + chr1_1:75700241-75700260 None:intergenic 50.0%
CGTTAGGTCTGAAAGTAGCC+TGG + chr1_1:75700244-75700263 None:intergenic 50.0%
AACTCAGCATCTTCTGGTGG+CGG - chr1_1:75700695-75700714 Msa0044200:intron 50.0%
!!! GGGAACTATGGTTTTGGTGG+TGG - chr1_1:75700752-75700771 Msa0044200:intron 50.0%
!! AGCATGAGTGGTGTTGTTGG+AGG - chr1_1:75700962-75700981 Msa0044200:intron 50.0%
!! ATGAGTGGTGTTGTTGGAGG+AGG - chr1_1:75700965-75700984 Msa0044200:intron 50.0%
TGATGAACGCATGTGGGCTC+AGG + chr1_1:75696938-75696957 None:intergenic 55.0%
!! CATGACCCTTCAAGGGCACT+TGG - chr1_1:75696956-75696975 Msa0044200:three_prime_UTR 55.0%
GGTCACCAAGTGCCCTTGAA+GGG + chr1_1:75696964-75696983 None:intergenic 55.0%
AGGTCACCAAGTGCCCTTGA+AGG + chr1_1:75696965-75696984 None:intergenic 55.0%
ACTGTGGCACTCTCTTCTCC+AGG - chr1_1:75697122-75697141 Msa0044200:intron 55.0%
TCAGTACACTGTGCCCTTGC+AGG - chr1_1:75697942-75697961 Msa0044200:intron 55.0%
CTGGGCTATGCTTAGACCCA+TGG + chr1_1:75700096-75700115 None:intergenic 55.0%
CATGGGTCTAAGCATAGCCC+AGG - chr1_1:75700094-75700113 Msa0044200:CDS 55.0%
GGGCATTTGTGCAGCTACCT+GGG + chr1_1:75700114-75700133 None:intergenic 55.0%
TGGGCATTTGTGCAGCTACC+TGG + chr1_1:75700115-75700134 None:intergenic 55.0%
CATGTGGTGGTCGAATTGCC+CGG + chr1_1:75700216-75700235 None:intergenic 55.0%
!! GGTGGTGGAAGTGGGAACTA+TGG - chr1_1:75700740-75700759 Msa0044200:intron 55.0%
GATCAAAGTGGAGGAGGAGG+AGG - chr1_1:75700845-75700864 Msa0044200:intron 55.0%
!! AGTGGTGTTGTTGGAGGAGG+AGG - chr1_1:75700968-75700987 Msa0044200:intron 55.0%
TTGGAGGAGGAGGAGGACAA+AGG - chr1_1:75700978-75700997 Msa0044200:intron 55.0%
TGGAGGAGGAGGAGGACAAA+GGG - chr1_1:75700979-75700998 Msa0044200:intron 55.0%
! AGGGCACTTGGTGACCTCAC+TGG - chr1_1:75696968-75696987 Msa0044200:three_prime_UTR 60.0%
! GGGCACTTGGTGACCTCACT+GGG - chr1_1:75696969-75696988 Msa0044200:three_prime_UTR 60.0%
GAATTGCCCGGTCCGATTGG+CGG + chr1_1:75700204-75700223 None:intergenic 60.0%
GTCGAATTGCCCGGTCCGAT+TGG + chr1_1:75700207-75700226 None:intergenic 60.0%
! AAGTAGCCTGGGGGAGCATG+TGG + chr1_1:75700232-75700251 None:intergenic 60.0%
CAAAGTGGAGGAGGAGGAGG+AGG - chr1_1:75700848-75700867 Msa0044200:intron 60.0%
GGTGTAGGGCTTGGAAGAGG+AGG - chr1_1:75700881-75700900 Msa0044200:intron 60.0%
GTAGGGCTTGGAAGAGGAGG+TGG - chr1_1:75700884-75700903 Msa0044200:intron 60.0%
!! GGTGTTGTTGGAGGAGGAGG+AGG - chr1_1:75700971-75700990 Msa0044200:intron 60.0%
! AGAGGAGGAAGAGGAGGTGC+TGG - chr1_1:75701082-75701101 Msa0044200:intron 60.0%
! TAGCCTGGGGGAGCATGTGG+TGG + chr1_1:75700229-75700248 None:intergenic 65.0%
AGTGGAGGAGGAGGAGGAGG+AGG - chr1_1:75700851-75700870 Msa0044200:intron 65.0%
GAGGAGGAGGAGGAGGAGGA+GGG - chr1_1:75700855-75700874 Msa0044200:intron 65.0%
AGGAGGAGGAGGAGGAGGAG+GGG - chr1_1:75700856-75700875 Msa0044200:intron 65.0%
! GAGGAGGAGGAGGGGGTGTA+GGG - chr1_1:75700867-75700886 Msa0044200:intron 65.0%
! GGGGGTGTAGGGCTTGGAAG+AGG - chr1_1:75700878-75700897 Msa0044200:intron 65.0%
!! GGAGGAAGAGGAGGTGCTGG+TGG - chr1_1:75701085-75701104 Msa0044200:intron 65.0%
!! GGAAGAGGAGGTGCTGGTGG+TGG - chr1_1:75701088-75701107 Msa0044200:intron 65.0%
!! AGAGGAGGTGCTGGTGGTGG+TGG - chr1_1:75701091-75701110 Msa0044200:intron 65.0%
TTTGGGGGAGGGGGGTTCGA+CGG + chr1_1:75703282-75703301 None:intergenic 65.0%
TTGCCCGGTCCGATTGGCGG+CGG + chr1_1:75700201-75700220 None:intergenic 70.0%
CGACCACCACATGCTCCCCC+AGG - chr1_1:75700223-75700242 Msa0044200:intron 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr1_1:75700854-75700873 Msa0044200:intron 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr1_1:75700854-75700873 Msa0044200:intron 70.0%
GGAGGAGGAGGAGGAGGAGG+GGG - chr1_1:75700854-75700873 Msa0044200:intron 70.0%
! GGAGGAGGAGGAGGGGGTGT+AGG - chr1_1:75700866-75700885 Msa0044200:intron 70.0%
! GGAGGAGGGGGTGTAGGGCT+TGG - chr1_1:75700872-75700891 Msa0044200:intron 70.0%
!! GGAGGTGCTGGTGGTGGTGG+TGG - chr1_1:75701094-75701113 Msa0044200:intron 70.0%
!! GCTGGTGGTGGTGGTGGAGC+AGG - chr1_1:75701100-75701119 Msa0044200:intron 70.0%
!! GGTGGTGGTGGTGGAGCAGG+AGG - chr1_1:75701103-75701122 Msa0044200:intron 70.0%
TCGGCGCAGCCGCCGCCAAT+CGG - chr1_1:75700189-75700208 Msa0044200:CDS 75.0%
GCAGCCGCCGCCAATCGGAC+CGG - chr1_1:75700194-75700213 Msa0044200:CDS 75.0%
CAGCCGCCGCCAATCGGACC+GGG - chr1_1:75700195-75700214 Msa0044200:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 75696737 75703453 75696737 ID=Msa0044200;Name=Msa0044200
chr1_1 mRNA 75696737 75703453 75696737 ID=Msa0044200-mRNA-1;Parent=Msa0044200;Name=Msa0044200-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|1|0.66|1|0.5|0.33|3|299|526
chr1_1 exon 75696737 75697014 75696737 ID=Msa0044200-mRNA-1:exon:25640;Parent=Msa0044200-mRNA-1
chr1_1 exon 75699031 75700225 75699031 ID=Msa0044200-mRNA-1:exon:25639;Parent=Msa0044200-mRNA-1
chr1_1 exon 75703047 75703453 75703047 ID=Msa0044200-mRNA-1:exon:25638;Parent=Msa0044200-mRNA-1
chr1_1 CDS 75703047 75703453 75703047 ID=Msa0044200-mRNA-1:cds;Parent=Msa0044200-mRNA-1
chr1_1 CDS 75699052 75700225 75699052 ID=Msa0044200-mRNA-1:cds;Parent=Msa0044200-mRNA-1
chr1_1 three_prime_UTR 75699031 75699051 75699031 ID=Msa0044200-mRNA-1:three_prime_utr;Parent=Msa0044200-mRNA-1
chr1_1 three_prime_UTR 75696737 75697014 75696737 ID=Msa0044200-mRNA-1:three_prime_utr;Parent=Msa0044200-mRNA-1
Gene Sequence

>Msa0044200

ATGGAAACAGATCCAGATGCAGAGGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTTATTTGTGAGGTATGCAACAAAGGGTTCCAAAGAGAGCAAAACCTACAGCTTCACAGAAGAGGACACAACTTGCCTTGGAAGCTTAAGCAGAAGACTACAAAAGAGCCTAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGCGTTCATCATGACCCTTCAAGGGCACTTGGTGACCTCACTGGGATTAAGAAACACTACTCTCGCAAACATGGTGAGAAGAAATGGAAGTGTGATAAGTGCTCTAAGAAGTATGCTGTTCAATCTGATTGGAAGGCACATTCTAAGACTTGTGGCACCAGAGAATATAGGTGTGACTGTGGCACTCTCTTCTCCAGGAGAGACAGTTTCATAACTCACAGAGCCTTCTGTGATGCATTGGCTCAAGAGGGTCCAAGACAGCCACCAATTTCTCTAACTGGTGCCATTGGATCTCATCTCTATGGAAGCTCAAGCAACAACAACACCATGGGTCTAAGCATAGCCCAGGTAGCTGCACAAATGCCCAACATGCAACAACAACAAGACCACCACAGCAATTCAGCTACTGAAATCTTGAGACTCGGCGCAGCCGCCGCCAATCGGACCGGGCAATTCGACCACCACATGCTCCCCCAGGCTACTTTCAGACCTAACGCCTTCTTCAACAATAACATTCATGAGCCAAACCAAAACTTTGTTCCTCATGATCCTTCCCAACAACAAGGTTTAATGATGCAGAATAGCCACAATAGCAACAACAGCAATCTCTTCAACATTCCGAATTTCCTTTCAAGTAACAGTACTAACAGTAGCAACAACTCATTCTCTGAACACTTGAATGTGAATAATGAAGGAACAAATTTCTTCAATGGATCAGCTGGAACAAGTAGTGCTCCATCACTCTTCAGCAATGTTTTCTCCCAAGGAGGAAACAGTAACATTAATGCTGCTGGTACTGCTATATCATCAATGTCAGCAACTGCACTTCTTCAGAAAGCTGCTCAAATGGGTGCAACTTCAAGTAATGGAAATGGCACTACCGCGACTTCTCTTCTCAAAAGCTTTGGAAACAATACTGGTGCAAGTAACTCAGCATCTTCTGGTGGCGGTGATCCTAGCAGAGTGCAAATGGGTGGTGGAAGTGGGAACTATGGTTTTGGTGGTGGGAATCATGAACAGAGTAACTTGCAGGATTTGATGAACTCTTTTGCTGCTACAGGAAATACTTCAATATTTGATCAAAGTGGAGGAGGAGGAGGAGGAGGAGGAGGGGGTGTAGGGCTTGGAAGAGGAGGTGGTGATAGCAGTCAGCTGACTCGTGACTTTTTAGGAGTTGGTCATGAGATTGTGAGAAGCATGAGTGGTGTTGTTGGAGGAGGAGGAGGACAAAGGGATCAACATGCAGCTGCTTTTAACTTGGCAGCTTCTTTGGAAGGAGATCAGAGAAACAATATCAATGCTGCACAATCATTTAGAGGAGGAAGAGGAGGTGCTGGTGGTGGTGGTGGAGCAGGAGGAAATTTTCATTGA
Protein sequence

>Msa0044200

METDPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQEGPRQPPISLTGAIGSHLYGSSSNNNTMGLSIAQVAAQMPNMQQQQDHHSNSATEILRLGAAAANRTGQFDHHMLPQATFRPNAFFNNNIHEPNQNFVPHDPSQQQGLMMQNSHNSNNSNLFNIPNFLSSNSTNSSNNSFSEHLNVNNEGTNFFNGSAGTSSAPSLFSNVFSQGGNSNINAAGTAISSMSATALLQKAAQMGATSSNGNGTTATSLLKSFGNNTGASNSASSGGGDPSRVQMGGGSGNYGFGGGNHEQSNLQDLMNSFAATGNTSIFDQSGGGGGGGGGGVGLGRGGGDSSQLTRDFLGVGHEIVRSMSGVVGGGGGQRDQHAAAFNLAASLEGDQRNNINAAQSFRGGRGGAGGGGGAGGNFH*