AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0183580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183580 MtrunA17_Chr1g0210821 96.000 525 12 5 4 526 54 571 0.0 1009
Msa0183580 MtrunA17_Chr1g0162971 57.975 395 110 15 4 388 51 399 5.58e-131 388
Msa0183580 MtrunA17_Chr1g0199101 48.790 496 194 14 4 481 57 510 1.45e-125 377
Msa0183580 MtrunA17_Chr1g0163001 45.572 542 175 19 5 499 54 522 1.80e-123 372
Msa0183580 MtrunA17_Chr4g0040571 45.344 494 203 17 4 474 49 498 1.58e-108 332
Msa0183580 MtrunA17_Chr2g0330171 89.542 153 16 0 4 156 56 208 3.20e-105 323
Msa0183580 MtrunA17_Chr8g0342421 88.889 153 17 0 4 156 72 224 5.13e-105 324
Msa0183580 MtrunA17_Chr7g0263941 87.582 153 19 0 4 156 44 196 2.32e-104 318
Msa0183580 MtrunA17_Chr1g0181381 83.851 161 25 1 4 163 48 208 3.95e-102 316
Msa0183580 MtrunA17_Chr7g0268961 83.871 155 25 0 2 156 30 184 8.63e-102 315
Msa0183580 MtrunA17_Chr8g0373541 84.667 150 23 0 4 153 43 192 2.32e-100 312
Msa0183580 MtrunA17_Chr1g0185121 47.849 372 102 10 4 366 50 338 8.15e-100 308
Msa0183580 MtrunA17_Chr1g0191991 85.333 150 22 0 4 153 73 222 2.13e-99 310
Msa0183580 MtrunA17_Chr4g0029521 75.294 170 39 2 4 170 48 217 5.74e-97 302
Msa0183580 MtrunA17_Chr1g0151351 82.119 151 26 1 4 153 51 201 2.65e-95 297
Msa0183580 MtrunA17_Chr2g0326381 81.169 154 28 1 4 156 42 195 2.09e-94 293
Msa0183580 MtrunA17_Chr3g0141431 75.676 148 35 1 4 150 32 179 1.89e-86 272
Msa0183580 MtrunA17_Chr2g0324991 83.206 131 22 0 5 135 3 133 5.95e-86 262
Msa0183580 MtrunA17_Chr8g0375521 52.020 198 93 2 4 199 37 234 1.01e-70 232
Msa0183580 MtrunA17_Chr6g0479921 62.329 146 54 1 4 148 39 184 2.36e-68 227
Msa0183580 MtrunA17_Chr1g0200421 35.762 151 85 4 8 146 236 386 2.60e-24 106
Msa0183580 MtrunA17_Chr3g0123941 29.843 191 120 5 4 186 118 302 5.98e-22 97.1
Msa0183580 MtrunA17_Chr2g0320341 34.868 152 85 4 6 143 227 378 1.71e-21 96.7
Msa0183580 MtrunA17_Chr8g0352011 36.301 146 83 5 10 146 166 310 1.23e-19 90.5
Msa0183580 MtrunA17_Chr5g0422571 35.417 144 82 4 15 148 106 248 1.27e-19 89.4
Msa0183580 MtrunA17_Chr7g0258011 33.540 161 89 6 10 153 176 335 3.77e-19 89.0
Msa0183580 MtrunA17_Chr1g0198651 35.862 145 78 5 15 146 107 249 6.96e-19 87.4
Msa0183580 MtrunA17_Chr4g0053341 33.775 151 90 4 5 146 69 218 1.41e-18 85.1
Msa0183580 MtrunA17_Chr8g0382121 31.757 148 90 5 7 143 109 256 2.08e-18 86.3
Msa0183580 MtrunA17_Chr1g0173841 34.932 146 85 5 10 146 215 359 2.29e-18 87.0
Msa0183580 MtrunA17_Chr2g0328921 33.562 146 87 5 10 146 138 282 9.33e-18 84.3
Msa0183580 MtrunA17_Chr2g0321291 34.694 147 84 5 10 146 133 277 2.50e-17 82.8
Msa0183580 MtrunA17_Chr4g0026521 34.014 147 85 5 10 146 118 262 4.21e-17 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0183580 AT2G02070.2 48.876 534 149 21 6 471 64 541 3.25e-124 377
Msa0183580 AT2G02070.1 48.876 534 149 21 6 471 64 541 3.25e-124 377
Msa0183580 AT2G02080.1 46.862 478 170 14 4 462 64 476 5.40e-121 365
Msa0183580 AT2G02080.4 46.862 478 170 14 4 462 64 476 5.40e-121 365
Msa0183580 AT2G02080.5 46.862 478 170 14 4 462 64 476 5.40e-121 365
Msa0183580 AT2G02080.3 46.862 478 170 14 4 462 64 476 5.40e-121 365
Msa0183580 AT2G02080.6 45.690 464 168 14 18 462 1 399 6.78e-112 339
Msa0183580 AT2G02080.2 45.690 464 168 14 18 462 1 399 6.78e-112 339
Msa0183580 AT1G14580.1 86.335 161 22 0 4 164 63 223 5.60e-107 328
Msa0183580 AT1G14580.2 86.335 161 22 0 4 164 63 223 5.60e-107 328
Msa0183580 AT1G14580.3 86.335 161 22 0 4 164 77 237 1.14e-106 327
Msa0183580 AT5G44160.2 43.215 479 209 12 1 474 5 425 1.08e-105 323
Msa0183580 AT5G66730.1 42.463 471 210 10 4 465 42 460 1.15e-105 325
Msa0183580 AT5G44160.1 43.487 476 206 12 4 474 47 464 4.30e-105 323
Msa0183580 AT1G03840.1 44.694 490 216 15 4 474 51 504 7.48e-105 323
Msa0183580 AT1G03840.2 44.490 490 217 15 4 474 49 502 4.38e-104 322
Msa0183580 AT3G50700.1 85.621 153 22 0 4 156 44 196 2.67e-102 315
Msa0183580 AT3G45260.2 86.364 154 20 1 4 156 49 202 3.83e-99 307
Msa0183580 AT3G45260.1 86.364 154 20 1 4 156 49 202 3.83e-99 307
Msa0183580 AT5G03150.1 83.019 159 26 1 4 161 63 221 2.37e-98 306
Msa0183580 AT3G13810.6 83.544 158 25 1 4 160 61 218 9.23e-98 305
Msa0183580 AT3G13810.4 83.544 158 25 1 4 160 80 237 1.28e-97 305
Msa0183580 AT3G13810.1 83.544 158 25 1 4 160 80 237 1.28e-97 305
Msa0183580 AT1G55110.3 83.439 157 25 1 4 159 73 229 1.28e-97 303
Msa0183580 AT1G55110.1 83.439 157 25 1 4 159 73 229 1.28e-97 303
Msa0183580 AT1G55110.2 83.439 157 25 1 4 159 73 229 1.28e-97 303
Msa0183580 AT3G13810.5 83.544 158 25 1 4 160 75 232 1.60e-97 305
Msa0183580 AT4G02670.1 83.766 154 24 1 4 156 63 216 3.26e-97 300
Msa0183580 AT4G02670.2 83.766 154 24 1 4 156 65 218 3.43e-97 300
Msa0183580 AT3G13810.2 83.439 157 25 1 5 160 82 238 5.83e-97 303
Msa0183580 AT3G13810.3 83.439 157 25 1 5 160 68 224 6.02e-97 303
Msa0183580 AT5G60470.3 81.169 154 28 1 4 156 50 203 3.55e-95 297
Msa0183580 AT5G60470.2 81.169 154 28 1 4 156 54 207 4.17e-95 297
Msa0183580 AT5G60470.1 78.981 157 32 1 1 156 42 198 6.78e-95 296
Msa0183580 AT2G01940.1 60.366 164 61 3 4 163 54 217 1.33e-69 230
Msa0183580 AT1G25250.1 62.162 148 53 2 3 147 19 166 2.65e-68 224
Msa0183580 AT1G25250.3 61.905 147 53 2 4 147 43 189 1.76e-67 223
Msa0183580 AT1G68130.1 62.329 146 53 2 4 147 51 196 3.09e-67 223
Msa0183580 AT2G01940.3 59.639 166 60 5 4 163 54 218 6.43e-66 220
Msa0183580 AT2G01940.2 57.812 128 50 3 40 163 1 128 6.66e-46 164
Msa0183580 AT1G68130.2 61.818 110 40 2 40 147 1 110 1.53e-44 160
Msa0183580 AT1G25250.2 60.360 111 41 2 40 147 1 111 7.95e-44 157
Msa0183580 AT1G34370.3 33.987 153 87 3 8 146 19 171 2.17e-23 100
Msa0183580 AT1G34370.2 33.987 153 87 3 8 146 229 381 3.49e-23 103
Msa0183580 AT1G34370.1 33.987 153 87 3 8 146 229 381 3.49e-23 103
Msa0183580 AT5G22890.1 31.737 167 99 5 8 159 202 368 1.40e-21 97.1
Msa0183580 AT1G13290.1 35.570 149 82 6 15 151 93 239 2.49e-18 86.3
Msa0183580 AT1G51220.1 32.877 146 88 5 10 146 165 309 3.53e-18 86.3
Msa0183580 AT3G57670.1 34.247 146 86 5 10 146 204 348 3.80e-18 87.0
Msa0183580 AT3G20880.1 33.562 146 87 5 10 146 243 387 6.72e-18 86.3
Msa0183580 AT1G34790.1 35.333 150 85 6 7 146 129 276 1.29e-17 84.0
Msa0183580 AT1G08290.1 36.765 136 73 6 22 146 179 312 1.61e-16 81.3

Find 138 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCTGTTTGTTGCCATTA+GGG 0.258326 1_4:+72547935 None:intergenic
AAGAAGCTTCAATAAAATTC+AGG 0.266894 1_4:+72541625 None:intergenic
ACTTGATCTAATTAAAGATT+TGG 0.270733 1_4:-72541676 Msa0183580:three_prime_UTR
GTTTGTTGCCATTAGGGTCT+TGG 0.290354 1_4:+72547941 None:intergenic
GATCATGAGGAACAAAGTTT+TGG 0.296420 1_4:+72544574 None:intergenic
ATGGCACCAGTTAGAGAAAT+TGG 0.304925 1_4:+72544837 None:intergenic
AGCATCATCTTCCTACTAAA+AGG 0.316308 1_4:-72543731 Msa0183580:intron
TGGGCATTTGTGCAGCTACC+TGG 0.317019 1_4:+72544757 None:intergenic
TAAACCTGTTTGTTGCCATT+AGG 0.329788 1_4:+72547934 None:intergenic
TAATGTTACTGTTTCCTCCT+TGG 0.332632 1_4:+72544340 None:intergenic
GGTGCTGGTGGTGGTGGAGC+AGG 0.337056 1_4:-72543769 Msa0183580:CDS
CAAAGTGGAGGAGGAGGAGG+AGG 0.344709 1_4:-72544021 Msa0183580:CDS
GCCATTGGATCTCATCTCTA+TGG 0.345561 1_4:-72544819 Msa0183580:CDS
AATGTTACTGTTTCCTCCTT+GGG 0.349156 1_4:+72544341 None:intergenic
GCAAGTAACTCAGCATCTTC+TGG 0.352752 1_4:-72544180 Msa0183580:CDS
ACTTCTCTTCTCAAAAGCTT+TGG 0.354902 1_4:-72544216 Msa0183580:CDS
TTTGTTGCCATTAGGGTCTT+GGG 0.357166 1_4:+72547942 None:intergenic
AGAGGAGGTGCTGGTGGTGG+TGG 0.360705 1_4:-72543775 Msa0183580:CDS
TCTTGTTGTTGTTGCATGTT+GGG 0.364031 1_4:+72544738 None:intergenic
CACAGATAAACCTTTCTCTT+AGG 0.370336 1_4:+72547807 None:intergenic
TCTTCAGAAAGCTGCTCAAA+TGG 0.372700 1_4:-72544274 Msa0183580:CDS
GGTGGTGGAAGTGGGAACTA+TGG 0.381676 1_4:-72544129 Msa0183580:CDS
GAAGGAACAAATTTCTTCAA+TGG 0.382802 1_4:-72544411 Msa0183580:CDS
GGAAGTGGGAACTATGGTTT+TGG 0.392846 1_4:-72544123 Msa0183580:CDS
GCAGCCGCCGCCAATCGGAC+CGG 0.393198 1_4:-72544675 Msa0183580:CDS
CATCATTAAACCTTGTTGTT+GGG 0.395369 1_4:+72544548 None:intergenic
AGTGGTGTTGTTGGAGGAGG+AGG 0.395753 1_4:-72543904 Msa0183580:CDS
CTGTTACTTGAAAGGAAATT+CGG 0.396306 1_4:+72544483 None:intergenic
GCAAACATGGTGAGAAGAAA+TGG 0.396336 1_4:-72547707 Msa0183580:CDS
GCATCATTAAACCTTGTTGT+TGG 0.396925 1_4:+72544547 None:intergenic
GGTGTAGGGCTTGGAAGAGG+AGG 0.397969 1_4:-72543991 Msa0183580:CDS
CAGCCACCAATTTCTCTAAC+TGG 0.400711 1_4:-72544843 Msa0183580:CDS
AGTGCTATCACCTCTGCATC+TGG 0.401274 1_4:+72547969 None:intergenic
AGAGAAATTGGTGGCTGTCT+TGG 0.401882 1_4:+72544849 None:intergenic
GGAAGAGGAGGTGCTGGTGG+TGG 0.401937 1_4:-72543778 Msa0183580:CDS
AAAAGCTTTGGAAACAATAC+TGG 0.403135 1_4:-72544204 Msa0183580:CDS
GATCAAAGTGGAGGAGGAGG+AGG 0.417269 1_4:-72544024 Msa0183580:CDS
TGATCCTAGCAGAGTGCAAA+TGG 0.420116 1_4:-72544151 Msa0183580:CDS
AGAGGAGGAAGAGGAGGTGC+TGG 0.422454 1_4:-72543784 Msa0183580:CDS
CAGCCGCCGCCAATCGGACC+GGG 0.427027 1_4:-72544674 Msa0183580:CDS
GTCGAATTGCCCGGTCCGAT+TGG 0.429459 1_4:+72544665 None:intergenic
GTCTTGTTGTTGTTGCATGT+TGG 0.430394 1_4:+72544737 None:intergenic
GGTGTTGTTGGAGGAGGAGG+AGG 0.431211 1_4:-72543901 Msa0183580:CDS
GCTGCTGCACAATCATTTAG+AGG 0.437053 1_4:-72543802 Msa0183580:CDS
TCGGCGCAGCCGCCGCCAAT+CGG 0.440183 1_4:-72544680 Msa0183580:CDS
TCATGAACAGAGTAACTTGC+AGG 0.442583 1_4:-72544091 Msa0183580:CDS
GCGTTCATCATGACCCTTCA+AGG 0.451309 1_4:-72547770 Msa0183580:CDS
GTGCAAATGGGTGGTGGAAG+TGG 0.451777 1_4:-72544138 Msa0183580:CDS
AGGGCACTTGGTGACCTCAC+TGG 0.452289 1_4:-72547750 Msa0183580:CDS
AATTTCTTCAATGGATCAGC+TGG 0.456222 1_4:-72544402 Msa0183580:CDS
CAGAGCCTTCTGTGATGCAT+TGG 0.460268 1_4:-72544883 Msa0183580:CDS
TTTGATCAAAGTGGAGGAGG+AGG 0.461762 1_4:-72544027 Msa0183580:CDS
CCAATAACAAAATCTATAAC+CGG 0.463076 1_4:+72541477 None:intergenic
AGTATGCTGTTCAATCTGAT+TGG 0.466037 1_4:-72547662 Msa0183580:CDS
ATTTCTCTAACTGGTGCCAT+TGG 0.468145 1_4:-72544834 Msa0183580:CDS
CTGTGATGCATTGGCTCAAG+AGG 0.473610 1_4:-72544874 Msa0183580:CDS
CGTTAGGTCTGAAAGTAGCC+TGG 0.474282 1_4:+72544628 None:intergenic
GTAGGGCTTGGAAGAGGAGG+TGG 0.476945 1_4:-72543988 Msa0183580:CDS
CTTCAGAAAGCTGCTCAAAT+GGG 0.479620 1_4:-72544273 Msa0183580:CDS
TTTGTGAGGTATGCAACAAA+GGG 0.479716 1_4:-72547911 Msa0183580:CDS
ATGAATGTTATTGTTGAAGA+AGG 0.481652 1_4:+72544605 None:intergenic
ACTATCTCCCAAGACCCTAA+TGG 0.482980 1_4:-72547949 Msa0183580:CDS
AGAAGCATGAGTGGTGTTGT+TGG 0.483138 1_4:-72543913 Msa0183580:CDS
GCAACTTCAAGTAATGGAAA+TGG 0.483733 1_4:-72544249 Msa0183580:CDS
GATTGCTGTTGTTGCTATTG+TGG 0.486706 1_4:+72544517 None:intergenic
AGACCCTAATGGCAACAAAC+AGG 0.487796 1_4:-72547938 Msa0183580:CDS
GGAGGAAGAGGAGGTGCTGG+TGG 0.490280 1_4:-72543781 Msa0183580:CDS
TGATGAACGCATGTGGGCTC+AGG 0.492840 1_4:+72547783 None:intergenic
CATGTGGTGGTCGAATTGCC+CGG 0.492902 1_4:+72544656 None:intergenic
TACAAAAGAGCCTAAGAGAA+AGG 0.500506 1_4:-72547817 Msa0183580:CDS
ACAGTCACACCTATATTCTC+TGG 0.503404 1_4:+72547614 None:intergenic
AACAGTAACATTAATGCTGC+TGG 0.504605 1_4:-72544330 Msa0183580:CDS
ATTAAACCTTGTTGTTGGGA+AGG 0.505891 1_4:+72544552 None:intergenic
GGGCACTTGGTGACCTCACT+GGG 0.506772 1_4:-72547749 Msa0183580:CDS
TTATTGTTGAAGAAGGCGTT+AGG 0.509288 1_4:+72544612 None:intergenic
ATGGGTGCAACTTCAAGTAA+TGG 0.513566 1_4:-72544255 Msa0183580:CDS
TGTTAGTACTGTTACTTGAA+AGG 0.514803 1_4:+72544475 None:intergenic
CATGACCCTTCAAGGGCACT+TGG 0.515364 1_4:-72547762 Msa0183580:CDS
CAATCATTTAGAGGAGGAAG+AGG 0.517987 1_4:-72543793 Msa0183580:CDS
GAAGAGGACACAACTTGCCT+TGG 0.519873 1_4:-72547857 Msa0183580:CDS
GGGCATTTGTGCAGCTACCT+GGG 0.522215 1_4:+72544758 None:intergenic
AGCAGAGTGCAAATGGGTGG+TGG 0.522557 1_4:-72544144 Msa0183580:CDS
GTCTTCTGCTTAAGCTTCCA+AGG 0.523295 1_4:+72547840 None:intergenic
AACAAACAGGTTTATTTGTG+AGG 0.525054 1_4:-72547925 Msa0183580:CDS
GAATTGCCCGGTCCGATTGG+CGG 0.525454 1_4:+72544668 None:intergenic
AGCATGAGTGGTGTTGTTGG+AGG 0.531782 1_4:-72543910 Msa0183580:CDS
AACTTGGCAGCTTCTTTGGA+AGG 0.532879 1_4:-72543850 Msa0183580:CDS
CTGGGCTATGCTTAGACCCA+TGG 0.532898 1_4:+72544776 None:intergenic
TTGCCCGGTCCGATTGGCGG+CGG 0.533309 1_4:+72544671 None:intergenic
ATGAGTGGTGTTGTTGGAGG+AGG 0.534700 1_4:-72543907 Msa0183580:CDS
ACTGTGGCACTCTCTTCTCC+AGG 0.535575 1_4:-72547596 Msa0183580:intron
ATTTGTGAGGTATGCAACAA+AGG 0.537155 1_4:-72547912 Msa0183580:CDS
GCTGGTGGTGGTGGAGCAGG+AGG 0.537179 1_4:-72543766 Msa0183580:CDS
CCACCCATTTGCACTCTGCT+AGG 0.537342 1_4:+72544147 None:intergenic
TGCTGTTCAATCTGATTGGA+AGG 0.548901 1_4:-72547658 Msa0183580:CDS
AAAACATTGCTGAAGAGTGA+TGG 0.549747 1_4:+72544366 None:intergenic
ATATTTGATCAAAGTGGAGG+AGG 0.551599 1_4:-72544030 Msa0183580:CDS
CACTTGAATGTGAATAATGA+AGG 0.553613 1_4:-72544429 Msa0183580:CDS
AACTCAGCATCTTCTGGTGG+CGG 0.555348 1_4:-72544174 Msa0183580:CDS
GTCCTCTTCTGTGAAGCTGT+AGG 0.557568 1_4:+72547871 None:intergenic
ACTTCAATATTTGATCAAAG+TGG 0.557815 1_4:-72544036 Msa0183580:CDS
TGCAAATGGGTGGTGGAAGT+GGG 0.558745 1_4:-72544137 Msa0183580:CDS
AACCTACAGCTTCACAGAAG+AGG 0.559175 1_4:-72547873 Msa0183580:CDS
AGGTCACCAAGTGCCCTTGA+AGG 0.560455 1_4:+72547756 None:intergenic
GTTAGGTCTGAAAGTAGCCT+GGG 0.562635 1_4:+72544629 None:intergenic
CAGTAGCTGAATTGCTGTGG+TGG 0.574152 1_4:+72544715 None:intergenic
AGAGCACAGTGATGCATATG+TGG 0.574545 1_4:-72541653 Msa0183580:three_prime_UTR
AAACACTACTCTCGCAAACA+TGG 0.582241 1_4:-72547720 Msa0183580:CDS
TGTGATGCATTGGCTCAAGA+GGG 0.582830 1_4:-72544873 Msa0183580:CDS
CATGATCCTTCCCAACAACA+AGG 0.585888 1_4:-72544558 Msa0183580:CDS
TCAATATTTGATCAAAGTGG+AGG 0.596270 1_4:-72544033 Msa0183580:CDS
TCATTTAGAGGAGGAAGAGG+AGG 0.597999 1_4:-72543790 Msa0183580:CDS
CTTGTGGCACCAGAGAATAT+AGG 0.598109 1_4:-72547623 Msa0183580:CDS
GATCCTAGCAGAGTGCAAAT+GGG 0.599256 1_4:-72544150 Msa0183580:CDS
TTGAGCCAATGCATCACAGA+AGG 0.600273 1_4:+72544878 None:intergenic
CATGGGTCTAAGCATAGCCC+AGG 0.603094 1_4:-72544775 Msa0183580:CDS
TCCATAGAGATGAGATCCAA+TGG 0.603687 1_4:+72544818 None:intergenic
GGTCACCAAGTGCCCTTGAA+GGG 0.610749 1_4:+72547757 None:intergenic
CGTTCATCATGACCCTTCAA+GGG 0.615083 1_4:-72547769 Msa0183580:CDS
GGAAACAGATCCAGATGCAG+AGG 0.628242 1_4:-72547979 Msa0183580:CDS
GCTACTGAAATCTTGAGACT+CGG 0.628908 1_4:-72544699 Msa0183580:CDS
TCAAGCAACAACAACACCAT+GGG 0.629958 1_4:-72544792 Msa0183580:CDS
GCACCAGTTAGAGAAATTGG+TGG 0.631481 1_4:+72544840 None:intergenic
AAGGCACATTCTAAGACTTG+TGG 0.632080 1_4:-72547639 Msa0183580:CDS
CTCAAGCAACAACAACACCA+TGG 0.635294 1_4:-72544793 Msa0183580:CDS
TGTTGTTGGGAAGGATCATG+AGG 0.647582 1_4:+72544561 None:intergenic
AGGGTCATGATGAACGCATG+TGG 0.655416 1_4:+72547776 None:intergenic
GAGATTGTGAGAAGCATGAG+TGG 0.666823 1_4:-72543922 Msa0183580:CDS
AGTAACTCAGCATCTTCTGG+TGG 0.670356 1_4:-72544177 Msa0183580:CDS
GAGCACAGTGATGCATATGT+GGG 0.676016 1_4:-72541652 Msa0183580:three_prime_UTR
GGGTCATGATGAACGCATGT+GGG 0.680517 1_4:+72547777 None:intergenic
TTAGGTCTGAAAGTAGCCTG+GGG 0.680570 1_4:+72544630 None:intergenic
GCTGCACAATCATTTAGAGG+AGG 0.682071 1_4:-72543799 Msa0183580:CDS
AGAGAATATAGGTGTGACTG+TGG 0.696795 1_4:-72547612 Msa0183580:CDS
TTTCAGTAGCTGAATTGCTG+TGG 0.697116 1_4:+72544712 None:intergenic
CCTAGCAGAGTGCAAATGGG+TGG 0.714810 1_4:-72544147 Msa0183580:CDS
AGTGTTTCTTAATCCCAGTG+AGG 0.718099 1_4:+72547736 None:intergenic
TAGGTCTGAAAGTAGCCTGG+GGG 0.734494 1_4:+72544631 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATACTATATAATTAGA+AGG + chr1_4:72544007-72544026 None:intergenic 10.0%
!!! ATAGTATTTTATTTTTTATG+AGG - chr1_4:72544016-72544035 Msa0183580:CDS 10.0%
!! TTAAGTCTATTAAAAAAAAA+TGG - chr1_4:72544212-72544231 Msa0183580:CDS 10.0%
!!! GTTTTTAAAATACTATTTTA+AGG - chr1_4:72546141-72546160 Msa0183580:intron 10.0%
!!! TAAAAATATTTTTATGATTG+AGG + chr1_4:72546576-72546595 None:intergenic 10.0%
!!! AATCATAAAAATATTTTTAC+TGG - chr1_4:72546577-72546596 Msa0183580:intron 10.0%
!!! TTCTTTTTTTGATATATATT+TGG - chr1_4:72546999-72547018 Msa0183580:intron 10.0%
!!! ATTTTATTTTATTTTTTTGG+GGG + chr1_4:72547847-72547866 None:intergenic 10.0%
!!! TTTTGTGAATGAAAAATAAT+GGG + chr1_4:72542873-72542892 None:intergenic 15.0%
!!! GCATAAAATTTTGATTAAAT+TGG + chr1_4:72542996-72543015 None:intergenic 15.0%
!! TAAGAATATATTCAATGTTA+AGG + chr1_4:72543312-72543331 None:intergenic 15.0%
!!! AATAAATTTGTTGAAAATGA+TGG + chr1_4:72543743-72543762 None:intergenic 15.0%
!!! TCTACAATTTTAACAAATTT+TGG - chr1_4:72546046-72546065 Msa0183580:intron 15.0%
!!! GTAAATACTCTTTTATATAT+TGG - chr1_4:72546342-72546361 Msa0183580:intron 15.0%
!!! TAATACTAATTTAGTTTAGA+AGG + chr1_4:72546724-72546743 None:intergenic 15.0%
!! TTGAAAATGAAACTTATATT+AGG - chr1_4:72546813-72546832 Msa0183580:intron 15.0%
!! AAGAAAGTAAAAAATTGAAA+AGG + chr1_4:72546984-72547003 None:intergenic 15.0%
!!! TTTTTTGATATATATTTGGT+TGG - chr1_4:72547003-72547022 Msa0183580:intron 15.0%
!!! TTTTCTATGTTACTATATTT+GGG - chr1_4:72547208-72547227 Msa0183580:intron 15.0%
!!! TTAATTAGATCAAGTTTTAA+TGG + chr1_4:72547745-72547764 None:intergenic 15.0%
!!! ATTTTATTAGATTTTGCTAT+TGG - chr1_4:72547902-72547921 Msa0183580:CDS 15.0%
!! AAATAACTGTTTGACAAAAA+TGG + chr1_4:72542040-72542059 None:intergenic 20.0%
!! TCTTTATTATCTAGTGAATT+TGG - chr1_4:72542178-72542197 Msa0183580:intron 20.0%
!!! TTGATTTGATTAAGATTCTA+TGG - chr1_4:72542247-72542266 Msa0183580:intron 20.0%
!!! TGTTTCAATATTTGTTAGTA+CGG - chr1_4:72542282-72542301 Msa0183580:intron 20.0%
!!! ATGGTTTTTGAAGTTTATTT+TGG - chr1_4:72542758-72542777 Msa0183580:intron 20.0%
!!! GTTTTGTGAATGAAAAATAA+TGG + chr1_4:72542874-72542893 None:intergenic 20.0%
!! AAGAAACACTAAAATTATGT+TGG + chr1_4:72542945-72542964 None:intergenic 20.0%
!!! TTGAATCGTATGATTTTAAT+TGG - chr1_4:72543118-72543137 Msa0183580:intron 20.0%
!!! TTATTGTCTTTTACTTGAAA+AGG - chr1_4:72543620-72543639 Msa0183580:intron 20.0%
!! TAGTAATCTATGTATAATTC+AGG - chr1_4:72543657-72543676 Msa0183580:intron 20.0%
!!! TTTACTTTTTAGGATAAAAC+TGG + chr1_4:72544158-72544177 None:intergenic 20.0%
!! TAACTAGGTATAATAATAGT+TGG + chr1_4:72544385-72544404 None:intergenic 20.0%
!! ACAAGAAAAAATTGTATGAA+AGG + chr1_4:72544417-72544436 None:intergenic 20.0%
!!! CTTTTCTATGTTACTATATT+TGG - chr1_4:72547207-72547226 Msa0183580:intron 20.0%
!! TTTCTATGTTACTATATTTG+GGG - chr1_4:72547209-72547228 Msa0183580:intron 20.0%
!!! TAGCTTAATTTTATCTAATC+AGG - chr1_4:72547241-72547260 Msa0183580:intron 20.0%
!!! TAACCATGTAATTTTTGAAA+CGG - chr1_4:72547666-72547685 Msa0183580:CDS 20.0%
!! ACTTGATCTAATTAAAGATT+TGG - chr1_4:72547750-72547769 Msa0183580:CDS 20.0%
!!! TATTAGTTTCAAGATTTTCA+TGG - chr1_4:72547876-72547895 Msa0183580:CDS 20.0%
!!! GGATATTTTAATTTAACTAC+CGG - chr1_4:72547930-72547949 Msa0183580:CDS 20.0%
! GAATTGTTATATATGTTACC+TGG + chr1_4:72541851-72541870 None:intergenic 25.0%
!!! ACACACATGTTTTGTTAATA+TGG - chr1_4:72541901-72541920 Msa0183580:intron 25.0%
!!! TATTTTTTTCAACCACGAAA+TGG - chr1_4:72542055-72542074 Msa0183580:intron 25.0%
!!! ATTTTTTTCAACCACGAAAT+GGG - chr1_4:72542056-72542075 Msa0183580:intron 25.0%
! TATTATCTAGTGAATTTGGT+TGG - chr1_4:72542182-72542201 Msa0183580:intron 25.0%
! TTGATTAAGATTCTATGGTT+TGG - chr1_4:72542252-72542271 Msa0183580:intron 25.0%
! ATGAGACTCGTATAATTATA+AGG + chr1_4:72542406-72542425 None:intergenic 25.0%
! AGCATAAGAGTAGAATATTA+TGG - chr1_4:72542473-72542492 Msa0183580:intron 25.0%
! GAATAGGATGAAAAAGAAAT+GGG + chr1_4:72542555-72542574 None:intergenic 25.0%
! TGAATAGGATGAAAAAGAAA+TGG + chr1_4:72542556-72542575 None:intergenic 25.0%
! AATAAACTTCAAAAACCATG+TGG + chr1_4:72542757-72542776 None:intergenic 25.0%
!!! ACTATTTTCTTGTTTCTCAT+AGG - chr1_4:72542781-72542800 Msa0183580:intron 25.0%
!!! CTCATAGGTTTTTTATAACA+TGG - chr1_4:72542796-72542815 Msa0183580:intron 25.0%
! CTCATTAAACATGATTAGAT+TGG + chr1_4:72542841-72542860 None:intergenic 25.0%
! CAATCTAATCATGTTTAATG+AGG - chr1_4:72542839-72542858 Msa0183580:intron 25.0%
! TTATATGTTTGAAGACAGAA+TGG - chr1_4:72542966-72542985 Msa0183580:intron 25.0%
! TATATGTTTGAAGACAGAAT+GGG - chr1_4:72542967-72542986 Msa0183580:intron 25.0%
!! TCAAAATTTTATGCAATCAC+CGG - chr1_4:72543002-72543021 Msa0183580:intron 25.0%
!!! TGTTAAGGAATTGATAATGT+AGG + chr1_4:72543297-72543316 None:intergenic 25.0%
! GTAATTAATTTCATTCCACT+TGG - chr1_4:72543429-72543448 Msa0183580:intron 25.0%
! AAGTATCACATTCTTTCATT+TGG - chr1_4:72543564-72543583 Msa0183580:intron 25.0%
! ATACATAGATTACTAGAAGT+GGG + chr1_4:72543652-72543671 None:intergenic 25.0%
! TATACATAGATTACTAGAAG+TGG + chr1_4:72543653-72543672 None:intergenic 25.0%
!! AAAAGCACATAAAATGTACT+AGG + chr1_4:72543835-72543854 None:intergenic 25.0%
!! TTTAATCATTAGTTTCTCAG+AGG + chr1_4:72543869-72543888 None:intergenic 25.0%
!!! TTTTTTCCTATGATTCTAGT+TGG - chr1_4:72543949-72543968 Msa0183580:CDS 25.0%
!!! TTTTTCCTATGATTCTAGTT+GGG - chr1_4:72543950-72543969 Msa0183580:CDS 25.0%
! ACTTAATTCAAATCGATATG+AGG + chr1_4:72544198-72544217 None:intergenic 25.0%
!! GAAATTGTTGTTAATAACAG+CGG - chr1_4:72544241-72544260 Msa0183580:CDS 25.0%
! ATACGAGAACAATTGTAAAA+TGG + chr1_4:72544270-72544289 None:intergenic 25.0%
! GAAAGGAAAATCATTTAACT+AGG + chr1_4:72544400-72544419 None:intergenic 25.0%
! TCACATAATGACTATTGTAA+TGG - chr1_4:72544451-72544470 Msa0183580:CDS 25.0%
! ATGAATGTTATTGTTGAAGA+AGG + chr1_4:72544824-72544843 None:intergenic 25.0%
! ACTTCAATATTTGATCAAAG+TGG - chr1_4:72545390-72545409 Msa0183580:intron 25.0%
! ATGATTACATTGTGATTAGT+GGG - chr1_4:72545822-72545841 Msa0183580:intron 25.0%
! TAAAAAAGAGCAATGTGAAT+AGG - chr1_4:72545933-72545952 Msa0183580:intron 25.0%
! ACATTGTAAATACCTTTCAA+CGG + chr1_4:72546189-72546208 None:intergenic 25.0%
! AACAATTATGATTGATGGAA+TGG + chr1_4:72546216-72546235 None:intergenic 25.0%
! GATTCAACAATTATGATTGA+TGG + chr1_4:72546221-72546240 None:intergenic 25.0%
! GTATATACCTTAAAGTCAAA+TGG - chr1_4:72546279-72546298 Msa0183580:intron 25.0%
! AATGAGACTTATATTTAGAG+AGG - chr1_4:72546454-72546473 Msa0183580:intron 25.0%
!! AGAAATAACATTTTCCTTTG+AGG - chr1_4:72546500-72546519 Msa0183580:intron 25.0%
! ATATCTACCTTAAAGTCAAA+TGG - chr1_4:72546613-72546632 Msa0183580:intron 25.0%
! TATAATATGCATCCATCTAT+TGG - chr1_4:72546758-72546777 Msa0183580:intron 25.0%
! ATGAAACTTATATTAGGAGT+AGG - chr1_4:72546819-72546838 Msa0183580:intron 25.0%
! GTTTATTGAATTTAACACGA+AGG + chr1_4:72547169-72547188 None:intergenic 25.0%
! TATCTACGTATGATATTAGT+TGG - chr1_4:72547303-72547322 Msa0183580:intron 25.0%
! TAAATAATAGACCTAAGTAG+TGG + chr1_4:72547472-72547491 None:intergenic 25.0%
! CTTAGGTCTATTATTTAGAT+TGG - chr1_4:72547475-72547494 Msa0183580:intron 25.0%
! TCATTATGTTTGTTCTTATG+TGG - chr1_4:72547546-72547565 Msa0183580:intron 25.0%
! TTACCGTTTCAAAAATTACA+TGG + chr1_4:72547672-72547691 None:intergenic 25.0%
! GTAATTAAGAATGACGATTA+TGG - chr1_4:72547688-72547707 Msa0183580:CDS 25.0%
! AAGAAGCTTCAATAAAATTC+AGG + chr1_4:72547804-72547823 None:intergenic 25.0%
!!! TATTTTATTTTTTTGGGGGA+GGG + chr1_4:72547843-72547862 None:intergenic 25.0%
!!! TTATTTTATTTTTTTGGGGG+AGG + chr1_4:72547844-72547863 None:intergenic 25.0%
!!! TAGATTTTGCTATTGGATAA+TGG - chr1_4:72547909-72547928 Msa0183580:CDS 25.0%
! CCAATAACAAAATCTATAAC+CGG + chr1_4:72547952-72547971 None:intergenic 25.0%
AACAAACAGGTTTATTTGTG+AGG - chr1_4:72541501-72541520 Msa0183580:three_prime_UTR 30.0%
!! AATTAACAAGTGCTGAATCT+CGG - chr1_4:72541932-72541951 Msa0183580:intron 30.0%
AGAAGAAATGTGATGTTGTT+TGG - chr1_4:72542080-72542099 Msa0183580:intron 30.0%
! AAATGTGATGTTGTTTGGTT+TGG - chr1_4:72542085-72542104 Msa0183580:intron 30.0%
!! ATGTTGTTTGGTTTGGTTTA+GGG - chr1_4:72542092-72542111 Msa0183580:intron 30.0%
! AATATTTGTTAGTACGGTGT+GGG - chr1_4:72542288-72542307 Msa0183580:intron 30.0%
TCACAAACAAAAAACACACA+CGG - chr1_4:72542365-72542384 Msa0183580:intron 30.0%
!! TACTCTTATGCTTTTTGACA+AGG + chr1_4:72542465-72542484 None:intergenic 30.0%
! ACCTTTTTCTGATTTTACCT+AGG - chr1_4:72542508-72542527 Msa0183580:intron 30.0%
TCCTAGGTAAAATCAGAAAA+AGG + chr1_4:72542512-72542531 None:intergenic 30.0%
!!! TACGATCTTTGTTTTCTTCT+TGG - chr1_4:72542610-72542629 Msa0183580:intron 30.0%
!!! ATCTTTGTTTTCTTCTTGGT+TGG - chr1_4:72542614-72542633 Msa0183580:intron 30.0%
GTACACAGAAAATATAGAGA+GGG + chr1_4:72542717-72542736 None:intergenic 30.0%
AGTACACAGAAAATATAGAG+AGG + chr1_4:72542718-72542737 None:intergenic 30.0%
!!! TTTTGCTTTTTTCTTCCACA+TGG - chr1_4:72542739-72542758 Msa0183580:intron 30.0%
AACCTAAAACCTTATTCACA+TGG - chr1_4:72542897-72542916 Msa0183580:intron 30.0%
! AACCATGTGAATAAGGTTTT+AGG + chr1_4:72542902-72542921 None:intergenic 30.0%
AATTGGTTACCTTTGATCTT+TGG - chr1_4:72543135-72543154 Msa0183580:intron 30.0%
! TTTTGCAATCCAAAGATCAA+AGG + chr1_4:72543147-72543166 None:intergenic 30.0%
! TTTGACAAGACTTTTCTCAT+TGG + chr1_4:72543193-72543212 None:intergenic 30.0%
TGTGATACTTAATTAACCCA+AGG + chr1_4:72543554-72543573 None:intergenic 30.0%
CACATGTCTTGATTTCAAAA+GGG + chr1_4:72544121-72544140 None:intergenic 30.0%
TCACATGTCTTGATTTCAAA+AGG + chr1_4:72544122-72544141 None:intergenic 30.0%
GTAAATGTGATGAATATTGC+AGG - chr1_4:72544500-72544519 Msa0183580:CDS 30.0%
!! CATCATTAAACCTTGTTGTT+GGG + chr1_4:72544881-72544900 None:intergenic 30.0%
! CTGTTACTTGAAAGGAAATT+CGG + chr1_4:72544946-72544965 None:intergenic 30.0%
! TGTTAGTACTGTTACTTGAA+AGG + chr1_4:72544954-72544973 None:intergenic 30.0%
CACTTGAATGTGAATAATGA+AGG - chr1_4:72544997-72545016 Msa0183580:intron 30.0%
GAAGGAACAAATTTCTTCAA+TGG - chr1_4:72545015-72545034 Msa0183580:intron 30.0%
!! AAAAGCTTTGGAAACAATAC+TGG - chr1_4:72545222-72545241 Msa0183580:intron 30.0%
TCAATATTTGATCAAAGTGG+AGG - chr1_4:72545393-72545412 Msa0183580:intron 30.0%
TCAATTACCTATAGTAACCT+AGG - chr1_4:72545748-72545767 Msa0183580:intron 30.0%
TAACATTCCTAGGTTACTAT+AGG + chr1_4:72545758-72545777 None:intergenic 30.0%
GTAAAACATGTAACATTCCT+AGG + chr1_4:72545768-72545787 None:intergenic 30.0%
GTAATCATCACATGATCATA+TGG + chr1_4:72545810-72545829 None:intergenic 30.0%
GATGATTACATTGTGATTAG+TGG - chr1_4:72545821-72545840 Msa0183580:intron 30.0%
TGATTACATTGTGATTAGTG+GGG - chr1_4:72545823-72545842 Msa0183580:intron 30.0%
AATGTGAATAGGAGGAATTT+AGG - chr1_4:72545944-72545963 Msa0183580:intron 30.0%
ATGTGAATAGGAGGAATTTA+GGG - chr1_4:72545945-72545964 Msa0183580:intron 30.0%
AATTGACATTAATTCCACAC+AGG - chr1_4:72545976-72545995 Msa0183580:intron 30.0%
TATATGTAACTACCGTTGAA+AGG - chr1_4:72546174-72546193 Msa0183580:intron 30.0%
! CAATCAACCATTTGACTTTA+AGG + chr1_4:72546289-72546308 None:intergenic 30.0%
! AATAACTTGTATCCATCCAT+TGG - chr1_4:72546426-72546445 Msa0183580:intron 30.0%
TAAGTCTCATTCTAAACCAA+TGG + chr1_4:72546445-72546464 None:intergenic 30.0%
ACATTGTAAATGCCTTTCAA+CGG + chr1_4:72546539-72546558 None:intergenic 30.0%
! CAATCAACCATTTGACTTTA+AGG + chr1_4:72546289-72546308 None:intergenic 30.0%
TCTCATTCTAAACCAATAGA+TGG + chr1_4:72546773-72546792 None:intergenic 30.0%
TTGATATATATTTGGTTGGC+TGG - chr1_4:72547007-72547026 Msa0183580:intron 30.0%
TATTTGTTCAGACACAAGTT+TGG + chr1_4:72547057-72547076 None:intergenic 30.0%
ATTTGTGTGACAAATGTATG+AGG + chr1_4:72547114-72547133 None:intergenic 30.0%
ATTGAATTTAACACGAAGGA+AGG + chr1_4:72547165-72547184 None:intergenic 30.0%
! AAAAAGAGTACAAGAGAATG+CGG + chr1_4:72547519-72547538 None:intergenic 30.0%
TAAGAATGACGATTATGGTT+TGG - chr1_4:72547693-72547712 Msa0183580:CDS 30.0%
!!! ATTTTATTTTTTTGGGGGAG+GGG + chr1_4:72547842-72547861 None:intergenic 30.0%
!! CCGGTTATAGATTTTGTTAT+TGG - chr1_4:72547949-72547968 Msa0183580:CDS 30.0%
! AAACCTGTTTGTTGCCATTA+GGG + chr1_4:72541494-72541513 None:intergenic 35.0%
! TAAACCTGTTTGTTGCCATT+AGG + chr1_4:72541495-72541514 None:intergenic 35.0%
ATTTGTGAGGTATGCAACAA+AGG - chr1_4:72541514-72541533 Msa0183580:three_prime_UTR 35.0%
TTTGTGAGGTATGCAACAAA+GGG - chr1_4:72541515-72541534 Msa0183580:three_prime_UTR 35.0%
TACAAAAGAGCCTAAGAGAA+AGG - chr1_4:72541609-72541628 Msa0183580:three_prime_UTR 35.0%
CACAGATAAACCTTTCTCTT+AGG + chr1_4:72541622-72541641 None:intergenic 35.0%
AGTATGCTGTTCAATCTGAT+TGG - chr1_4:72541764-72541783 Msa0183580:intron 35.0%
CGGTAGAATAGACTGTAATA+AGG - chr1_4:72541952-72541971 Msa0183580:intron 35.0%
!! GATGTTGTTTGGTTTGGTTT+AGG - chr1_4:72542091-72542110 Msa0183580:intron 35.0%
TTCTTCAAGTGACTATAGAG+AGG - chr1_4:72542137-72542156 Msa0183580:intron 35.0%
! CAATATTTGTTAGTACGGTG+TGG - chr1_4:72542287-72542306 Msa0183580:intron 35.0%
! TTTTCAGAGATCATTCACGT+GGG + chr1_4:72542339-72542358 None:intergenic 35.0%
!! AAAATGAAGCACTGTTTCCT+AGG + chr1_4:72542528-72542547 None:intergenic 35.0%
!! GATTAGATTGGTCGTGATTT+TGG + chr1_4:72542829-72542848 None:intergenic 35.0%
GAACTTGAACCATGTGAATA+AGG + chr1_4:72542909-72542928 None:intergenic 35.0%
TAAAATTATGTTGGTCCGAG+TGG + chr1_4:72542936-72542955 None:intergenic 35.0%
ACGATCACAAATCTTTCTAC+CGG + chr1_4:72543024-72543043 None:intergenic 35.0%
! ACACGCAAATTTTTGTCCTT+GGG - chr1_4:72543535-72543554 Msa0183580:intron 35.0%
AATTGCCCAACTAGAATCAT+AGG + chr1_4:72543958-72543977 None:intergenic 35.0%
TCTTGATTTCAAAAGGGATG+GGG + chr1_4:72544115-72544134 None:intergenic 35.0%
GTCTTGATTTCAAAAGGGAT+GGG + chr1_4:72544116-72544135 None:intergenic 35.0%
TGTCTTGATTTCAAAAGGGA+TGG + chr1_4:72544117-72544136 None:intergenic 35.0%
!! TCTTGTTGTTGTTGCATGTT+GGG + chr1_4:72544691-72544710 None:intergenic 35.0%
!! TTATTGTTGAAGAAGGCGTT+AGG + chr1_4:72544817-72544836 None:intergenic 35.0%
!!! TGAGGAACAAAGTTTTGGTT+TGG + chr1_4:72544850-72544869 None:intergenic 35.0%
! GATCATGAGGAACAAAGTTT+TGG + chr1_4:72544855-72544874 None:intergenic 35.0%
!! ATTAAACCTTGTTGTTGGGA+AGG + chr1_4:72544877-72544896 None:intergenic 35.0%
! GCATCATTAAACCTTGTTGT+TGG + chr1_4:72544882-72544901 None:intergenic 35.0%
AATTTCTTCAATGGATCAGC+TGG - chr1_4:72545024-72545043 Msa0183580:intron 35.0%
AAAACATTGCTGAAGAGTGA+TGG + chr1_4:72545063-72545082 None:intergenic 35.0%
AATGTTACTGTTTCCTCCTT+GGG + chr1_4:72545088-72545107 None:intergenic 35.0%
TAATGTTACTGTTTCCTCCT+TGG + chr1_4:72545089-72545108 None:intergenic 35.0%
AACAGTAACATTAATGCTGC+TGG - chr1_4:72545096-72545115 Msa0183580:intron 35.0%
! GCAACTTCAAGTAATGGAAA+TGG - chr1_4:72545177-72545196 Msa0183580:intron 35.0%
ACTTCTCTTCTCAAAAGCTT+TGG - chr1_4:72545210-72545229 Msa0183580:intron 35.0%
ATATTTGATCAAAGTGGAGG+AGG - chr1_4:72545396-72545415 Msa0183580:intron 35.0%
!!! TTTTAACTTGGCAGCTTCTT+TGG - chr1_4:72545572-72545591 Msa0183580:intron 35.0%
AGCATCATCTTCCTACTAAA+AGG - chr1_4:72545695-72545714 Msa0183580:intron 35.0%
GATTACATTGTGATTAGTGG+GGG - chr1_4:72545824-72545843 Msa0183580:intron 35.0%
AAAAGAGCAATGTGAATAGG+AGG - chr1_4:72545936-72545955 Msa0183580:intron 35.0%
! TTTTCTTGAACAGCGGTAAA+TGG + chr1_4:72546018-72546037 None:intergenic 35.0%
!! GACAACTTTTTCTTGAACAG+CGG + chr1_4:72546025-72546044 None:intergenic 35.0%
TCTCATTCTAAACCAATGGA+TGG + chr1_4:72546441-72546460 None:intergenic 35.0%
GTAGGTACATATATCCTCAA+AGG + chr1_4:72546517-72546536 None:intergenic 35.0%
TATATGTACCTACCGTTGAA+AGG - chr1_4:72546524-72546543 Msa0183580:intron 35.0%
! TGTGATAAAAAGTGTGTGTG+TGG - chr1_4:72546886-72546905 Msa0183580:intron 35.0%
AATTTAACACGAAGGAAGGA+AGG + chr1_4:72547161-72547180 None:intergenic 35.0%
TAATAAGTACTCTGCACTCA+TGG + chr1_4:72547582-72547601 None:intergenic 35.0%
!!! ATTATGGTTTGGCTTTTTGC+AGG - chr1_4:72547704-72547723 Msa0183580:CDS 35.0%
!!! TTATGGTTTGGCTTTTTGCA+GGG - chr1_4:72547705-72547724 Msa0183580:CDS 35.0%
!! GATCAAGTTTTAATGGAGCA+TGG + chr1_4:72547738-72547757 None:intergenic 35.0%
!!! TTTTATTTTTTTGGGGGAGG+GGG + chr1_4:72547841-72547860 None:intergenic 35.0%
TTTGTTGCCATTAGGGTCTT+GGG + chr1_4:72541487-72541506 None:intergenic 40.0%
AGTGTTTCTTAATCCCAGTG+AGG + chr1_4:72541693-72541712 None:intergenic 40.0%
AAACACTACTCTCGCAAACA+TGG - chr1_4:72541706-72541725 Msa0183580:intron 40.0%
GCAAACATGGTGAGAAGAAA+TGG - chr1_4:72541719-72541738 Msa0183580:intron 40.0%
TGCTGTTCAATCTGATTGGA+AGG - chr1_4:72541768-72541787 Msa0183580:intron 40.0%
!! AAGGCACATTCTAAGACTTG+TGG - chr1_4:72541787-72541806 Msa0183580:intron 40.0%
ACAGTCACACCTATATTCTC+TGG + chr1_4:72541815-72541834 None:intergenic 40.0%
AGAGAATATAGGTGTGACTG+TGG - chr1_4:72541814-72541833 Msa0183580:intron 40.0%
CACGATTGTAAGTGAGAGAA+TGG + chr1_4:72541978-72541997 None:intergenic 40.0%
CATTTCTTCTTCCCATTTCG+TGG + chr1_4:72542070-72542089 None:intergenic 40.0%
! GTTTTCAGAGATCATTCACG+TGG + chr1_4:72542340-72542359 None:intergenic 40.0%
CAAACAAAAAACACACACGG+AGG - chr1_4:72542368-72542387 Msa0183580:intron 40.0%
AACAACACCACACAACTTCA+TGG + chr1_4:72542591-72542610 None:intergenic 40.0%
!! ATGAAAAGAAGCACCTGCAA+GGG + chr1_4:72542663-72542682 None:intergenic 40.0%
! GGTTCAAGTTCAATTCCACT+CGG - chr1_4:72542918-72542937 Msa0183580:intron 40.0%
! TCCACTTGGTTGTGTCTTTT+AGG - chr1_4:72543443-72543462 Msa0183580:intron 40.0%
TCCTAAAAGACACAACCAAG+TGG + chr1_4:72543447-72543466 None:intergenic 40.0%
! ACTTGGTTGTGTCTTTTAGG+AGG - chr1_4:72543446-72543465 Msa0183580:intron 40.0%
! CACACGCAAATTTTTGTCCT+TGG - chr1_4:72543534-72543553 Msa0183580:intron 40.0%
AGATTACTAGAAGTGGGACT+TGG + chr1_4:72543646-72543665 None:intergenic 40.0%
!! GAAAAAGTTGATGCCGAAAC+TGG - chr1_4:72544065-72544084 Msa0183580:CDS 40.0%
TTTCTGCAACTTGCCAGTTT+CGG + chr1_4:72544081-72544100 None:intergenic 40.0%
TTGATTTCAAAAGGGATGGG+GGG + chr1_4:72544113-72544132 None:intergenic 40.0%
CTTGATTTCAAAAGGGATGG+GGG + chr1_4:72544114-72544133 None:intergenic 40.0%
ATGGCACCAGTTAGAGAAAT+TGG + chr1_4:72544592-72544611 None:intergenic 40.0%
!! ATTTCTCTAACTGGTGCCAT+TGG - chr1_4:72544592-72544611 Msa0183580:CDS 40.0%
TCCATAGAGATGAGATCCAA+TGG + chr1_4:72544611-72544630 None:intergenic 40.0%
TCAAGCAACAACAACACCAT+GGG - chr1_4:72544634-72544653 Msa0183580:CDS 40.0%
!! GTCTTGTTGTTGTTGCATGT+TGG + chr1_4:72544692-72544711 None:intergenic 40.0%
TTTCAGTAGCTGAATTGCTG+TGG + chr1_4:72544717-72544736 None:intergenic 40.0%
GCTACTGAAATCTTGAGACT+CGG - chr1_4:72544727-72544746 Msa0183580:CDS 40.0%
! GATTGCTGTTGTTGCTATTG+TGG + chr1_4:72544912-72544931 None:intergenic 40.0%
! TTCAGCAATGTTTTCTCCCA+AGG - chr1_4:72545069-72545088 Msa0183580:intron 40.0%
TCTTCAGAAAGCTGCTCAAA+TGG - chr1_4:72545152-72545171 Msa0183580:intron 40.0%
CTTCAGAAAGCTGCTCAAAT+GGG - chr1_4:72545153-72545172 Msa0183580:intron 40.0%
ATGGGTGCAACTTCAAGTAA+TGG - chr1_4:72545171-72545190 Msa0183580:intron 40.0%
! TCATGAACAGAGTAACTTGC+AGG - chr1_4:72545335-72545354 Msa0183580:intron 40.0%
! ATGAACTCTTTTGCTGCTAC+AGG - chr1_4:72545363-72545382 Msa0183580:intron 40.0%
!!! ACTCGTGACTTTTTAGGTGT+TGG - chr1_4:72545477-72545496 Msa0183580:intron 40.0%
!!! ACATGCAGCTGCTTTTAACT+TGG - chr1_4:72545560-72545579 Msa0183580:intron 40.0%
CAATCATTTAGAGGAGGAAG+AGG - chr1_4:72545633-72545652 Msa0183580:intron 40.0%
! TGACGTACGTACCTTTTAGT+AGG + chr1_4:72545709-72545728 None:intergenic 40.0%
TGTAAATGCCTTTCAACGGT+AGG + chr1_4:72546535-72546554 None:intergenic 40.0%
! ATATATTTGGTTGGCTGGCA+AGG - chr1_4:72547012-72547031 Msa0183580:intron 40.0%
TGTGTGACAAATGTATGAGG+TGG + chr1_4:72547111-72547130 None:intergenic 40.0%
GAATGTATCATGCACGTATC+TGG - chr1_4:72547422-72547441 Msa0183580:intron 40.0%
TGTTCCTTTCTCCACTACTT+AGG - chr1_4:72547458-72547477 Msa0183580:intron 40.0%
! TAGACCTAAGTAGTGGAGAA+AGG + chr1_4:72547465-72547484 None:intergenic 40.0%
!!! TTTATTTTTTTGGGGGAGGG+GGG + chr1_4:72547840-72547859 None:intergenic 40.0%
ACTATCTCCCAAGACCCTAA+TGG - chr1_4:72541477-72541496 Msa0183580:three_prime_UTR 45.0%
! GTTTGTTGCCATTAGGGTCT+TGG + chr1_4:72541488-72541507 None:intergenic 45.0%
AGACCCTAATGGCAACAAAC+AGG - chr1_4:72541488-72541507 Msa0183580:three_prime_UTR 45.0%
! GCTGTAGGTTTTGCTCTCTT+TGG + chr1_4:72541543-72541562 None:intergenic 45.0%
AACCTACAGCTTCACAGAAG+AGG - chr1_4:72541553-72541572 Msa0183580:three_prime_UTR 45.0%
GTCTTCTGCTTAAGCTTCCA+AGG + chr1_4:72541589-72541608 None:intergenic 45.0%
CGTTCATCATGACCCTTCAA+GGG - chr1_4:72541657-72541676 Msa0183580:three_prime_UTR 45.0%
CTTGTGGCACCAGAGAATAT+AGG - chr1_4:72541803-72541822 Msa0183580:intron 45.0%
TACGGTGTGGGCAAATGAAA+TGG - chr1_4:72542300-72542319 Msa0183580:intron 45.0%
GTGTGGGCAAATGAAATGGA+TGG - chr1_4:72542304-72542323 Msa0183580:intron 45.0%
CAAAAAACACACACGGAGGA+AGG - chr1_4:72542372-72542391 Msa0183580:intron 45.0%
GGAAAGAGAAAGAGAGAGAG+AGG + chr1_4:72542444-72542463 None:intergenic 45.0%
TGGCATAGCAACACGTGAAT+AGG + chr1_4:72542571-72542590 None:intergenic 45.0%
TGCTATGCCATGAAGTTGTG+TGG - chr1_4:72542581-72542600 Msa0183580:intron 45.0%
!! CATGAAAAGAAGCACCTGCA+AGG + chr1_4:72542664-72542683 None:intergenic 45.0%
CTTGACATTGCAGTTCTTCG+TGG - chr1_4:72543366-72543385 Msa0183580:intron 45.0%
TTGAGCCAATGCATCACAGA+AGG + chr1_4:72544551-72544570 None:intergenic 45.0%
!! TGTGATGCATTGGCTCAAGA+GGG - chr1_4:72544553-72544572 Msa0183580:CDS 45.0%
! AGAGAAATTGGTGGCTGTCT+TGG + chr1_4:72544580-72544599 None:intergenic 45.0%
CAGCCACCAATTTCTCTAAC+TGG - chr1_4:72544583-72544602 Msa0183580:CDS 45.0%
GCACCAGTTAGAGAAATTGG+TGG + chr1_4:72544589-72544608 None:intergenic 45.0%
GCCATTGGATCTCATCTCTA+TGG - chr1_4:72544607-72544626 Msa0183580:CDS 45.0%
CTCAAGCAACAACAACACCA+TGG - chr1_4:72544633-72544652 Msa0183580:CDS 45.0%
TTAGGTCTGAAAGTAGCCTG+GGG + chr1_4:72544799-72544818 None:intergenic 45.0%
GTTAGGTCTGAAAGTAGCCT+GGG + chr1_4:72544800-72544819 None:intergenic 45.0%
TGTTGTTGGGAAGGATCATG+AGG + chr1_4:72544868-72544887 None:intergenic 45.0%
CATGATCCTTCCCAACAACA+AGG - chr1_4:72544868-72544887 Msa0183580:CDS 45.0%
! AGCAATGTTTTCTCCCAAGG+AGG - chr1_4:72545072-72545091 Msa0183580:intron 45.0%
!! GCTTTTGAGAAGAGAAGTCG+CGG + chr1_4:72545208-72545227 None:intergenic 45.0%
GCAAGTAACTCAGCATCTTC+TGG - chr1_4:72545246-72545265 Msa0183580:intron 45.0%
AGTAACTCAGCATCTTCTGG+TGG - chr1_4:72545249-72545268 Msa0183580:intron 45.0%
TGATCCTAGCAGAGTGCAAA+TGG - chr1_4:72545275-72545294 Msa0183580:intron 45.0%
GATCCTAGCAGAGTGCAAAT+GGG - chr1_4:72545276-72545295 Msa0183580:intron 45.0%
! GGAAGTGGGAACTATGGTTT+TGG - chr1_4:72545303-72545322 Msa0183580:intron 45.0%
!!! AGTGGGAACTATGGTTTTGG+TGG - chr1_4:72545306-72545325 Msa0183580:intron 45.0%
!!! GGAACTATGGTTTTGGTGGT+GGG - chr1_4:72545310-72545329 Msa0183580:intron 45.0%
TTTGATCAAAGTGGAGGAGG+AGG - chr1_4:72545399-72545418 Msa0183580:intron 45.0%
!!! CAGCTGACTCGTGACTTTTT+AGG - chr1_4:72545471-72545490 Msa0183580:intron 45.0%
! GAGATTGTGAGAAGCATGAG+TGG - chr1_4:72545504-72545523 Msa0183580:intron 45.0%
!! AGAAGCATGAGTGGTGTTGT+TGG - chr1_4:72545513-72545532 Msa0183580:intron 45.0%
AACTTGGCAGCTTCTTTGGA+AGG - chr1_4:72545576-72545595 Msa0183580:intron 45.0%
GCTGCTGCACAATCATTTAG+AGG - chr1_4:72545624-72545643 Msa0183580:intron 45.0%
GCTGCACAATCATTTAGAGG+AGG - chr1_4:72545627-72545646 Msa0183580:intron 45.0%
TCATTTAGAGGAGGAAGAGG+AGG - chr1_4:72545636-72545655 Msa0183580:intron 45.0%
! GAATAGGAGGAATTTAGGGC+AGG - chr1_4:72545949-72545968 Msa0183580:intron 45.0%
ATTCATTGTGTACGCCTGTG+TGG + chr1_4:72545993-72546012 None:intergenic 45.0%
GTCTGACAAGTTGTCTTGCA+TGG - chr1_4:72546908-72546927 Msa0183580:intron 45.0%
AGAGCACAGTGATGCATATG+TGG - chr1_4:72547773-72547792 Msa0183580:CDS 45.0%
GAGCACAGTGATGCATATGT+GGG - chr1_4:72547774-72547793 Msa0183580:CDS 45.0%
!!! AAAATTTTATTTTACTTTTT+AGG + chr1_4:72544168-72544187 None:intergenic 5.0%
!!! AATTTTATTTTATTTTTTTG+GGG + chr1_4:72547848-72547867 None:intergenic 5.0%
!!! GAATTTTATTTTATTTTTTT+GGG + chr1_4:72547849-72547868 None:intergenic 5.0%
!!! AGAATTTTATTTTATTTTTT+TGG + chr1_4:72547850-72547869 None:intergenic 5.0%
GGAAACAGATCCAGATGCAG+AGG - chr1_4:72541447-72541466 Msa0183580:three_prime_UTR 50.0%
AGTGCTATCACCTCTGCATC+TGG + chr1_4:72541460-72541479 None:intergenic 50.0%
GTCCTCTTCTGTGAAGCTGT+AGG + chr1_4:72541558-72541577 None:intergenic 50.0%
GAAGAGGACACAACTTGCCT+TGG - chr1_4:72541569-72541588 Msa0183580:three_prime_UTR 50.0%
GGGTCATGATGAACGCATGT+GGG + chr1_4:72541652-72541671 None:intergenic 50.0%
AGGGTCATGATGAACGCATG+TGG + chr1_4:72541653-72541672 None:intergenic 50.0%
GCGTTCATCATGACCCTTCA+AGG - chr1_4:72541656-72541675 Msa0183580:three_prime_UTR 50.0%
GTGTGTGTGTGTGTGTGTGA+AGG + chr1_4:72541887-72541906 None:intergenic 50.0%
TCAGAGATCATTCACGTGGG+TGG + chr1_4:72542336-72542355 None:intergenic 50.0%
CAGAGCCTTCTGTGATGCAT+TGG - chr1_4:72544543-72544562 Msa0183580:CDS 50.0%
!! CTGTGATGCATTGGCTCAAG+AGG - chr1_4:72544552-72544571 Msa0183580:CDS 50.0%
CAGTAGCTGAATTGCTGTGG+TGG + chr1_4:72544714-72544733 None:intergenic 50.0%
TAGGTCTGAAAGTAGCCTGG+GGG + chr1_4:72544798-72544817 None:intergenic 50.0%
CGTTAGGTCTGAAAGTAGCC+TGG + chr1_4:72544801-72544820 None:intergenic 50.0%
AACTCAGCATCTTCTGGTGG+CGG - chr1_4:72545252-72545271 Msa0183580:intron 50.0%
!! TGCAAATGGGTGGTGGAAGT+GGG - chr1_4:72545289-72545308 Msa0183580:intron 50.0%
!!! GGGAACTATGGTTTTGGTGG+TGG - chr1_4:72545309-72545328 Msa0183580:intron 50.0%
!! AGCATGAGTGGTGTTGTTGG+AGG - chr1_4:72545516-72545535 Msa0183580:intron 50.0%
!! ATGAGTGGTGTTGTTGGAGG+AGG - chr1_4:72545519-72545538 Msa0183580:intron 50.0%
TGATGAACGCATGTGGGCTC+AGG + chr1_4:72541646-72541665 None:intergenic 55.0%
!! CATGACCCTTCAAGGGCACT+TGG - chr1_4:72541664-72541683 Msa0183580:three_prime_UTR 55.0%
GGTCACCAAGTGCCCTTGAA+GGG + chr1_4:72541672-72541691 None:intergenic 55.0%
AGGTCACCAAGTGCCCTTGA+AGG + chr1_4:72541673-72541692 None:intergenic 55.0%
ACTGTGGCACTCTCTTCTCC+AGG - chr1_4:72541830-72541849 Msa0183580:intron 55.0%
TCAGTACACTGTGCCCTTGC+AGG - chr1_4:72542647-72542666 Msa0183580:intron 55.0%
CTGGGCTATGCTTAGACCCA+TGG + chr1_4:72544653-72544672 None:intergenic 55.0%
CATGGGTCTAAGCATAGCCC+AGG - chr1_4:72544651-72544670 Msa0183580:CDS 55.0%
GGGCATTTGTGCAGCTACCT+GGG + chr1_4:72544671-72544690 None:intergenic 55.0%
TGGGCATTTGTGCAGCTACC+TGG + chr1_4:72544672-72544691 None:intergenic 55.0%
CATGTGGTGGTCGAATTGCC+CGG + chr1_4:72544773-72544792 None:intergenic 55.0%
CCACCCATTTGCACTCTGCT+AGG + chr1_4:72545282-72545301 None:intergenic 55.0%
CCTAGCAGAGTGCAAATGGG+TGG - chr1_4:72545279-72545298 Msa0183580:intron 55.0%
AGCAGAGTGCAAATGGGTGG+TGG - chr1_4:72545282-72545301 Msa0183580:intron 55.0%
!! GTGCAAATGGGTGGTGGAAG+TGG - chr1_4:72545288-72545307 Msa0183580:intron 55.0%
!! GGTGGTGGAAGTGGGAACTA+TGG - chr1_4:72545297-72545316 Msa0183580:intron 55.0%
GATCAAAGTGGAGGAGGAGG+AGG - chr1_4:72545402-72545421 Msa0183580:intron 55.0%
!! AGTGGTGTTGTTGGAGGAGG+AGG - chr1_4:72545522-72545541 Msa0183580:intron 55.0%
TTGGAGGAGGAGGAGGACAA+AGG - chr1_4:72545532-72545551 Msa0183580:intron 55.0%
TGGAGGAGGAGGAGGACAAA+GGG - chr1_4:72545533-72545552 Msa0183580:intron 55.0%
! AGGGCACTTGGTGACCTCAC+TGG - chr1_4:72541676-72541695 Msa0183580:three_prime_UTR 60.0%
! GGGCACTTGGTGACCTCACT+GGG - chr1_4:72541677-72541696 Msa0183580:three_prime_UTR 60.0%
GAATTGCCCGGTCCGATTGG+CGG + chr1_4:72544761-72544780 None:intergenic 60.0%
GTCGAATTGCCCGGTCCGAT+TGG + chr1_4:72544764-72544783 None:intergenic 60.0%
! AAGTAGCCTGGGGGAGCATG+TGG + chr1_4:72544789-72544808 None:intergenic 60.0%
CAAAGTGGAGGAGGAGGAGG+AGG - chr1_4:72545405-72545424 Msa0183580:intron 60.0%
!! GGTGTTGTTGGAGGAGGAGG+AGG - chr1_4:72545525-72545544 Msa0183580:intron 60.0%
! AGAGGAGGAAGAGGAGGTGC+TGG - chr1_4:72545642-72545661 Msa0183580:intron 60.0%
! TAGCCTGGGGGAGCATGTGG+TGG + chr1_4:72544786-72544805 None:intergenic 65.0%
AGTGGAGGAGGAGGAGGAGG+AGG - chr1_4:72545408-72545427 Msa0183580:intron 65.0%
GAGGAGGAGGAGGAGGAGGA+GGG - chr1_4:72545412-72545431 Msa0183580:intron 65.0%
AGGAGGAGGAGGAGGAGGAG+GGG - chr1_4:72545413-72545432 Msa0183580:intron 65.0%
! GAGGAGGAGGAGGGGGTGTA+GGG - chr1_4:72545421-72545440 Msa0183580:intron 65.0%
!! GGAGGAAGAGGAGGTGCTGG+TGG - chr1_4:72545645-72545664 Msa0183580:intron 65.0%
!! GGAAGAGGAGGTGCTGGTGG+TGG - chr1_4:72545648-72545667 Msa0183580:intron 65.0%
!! AGAGGAGGTGCTGGTGGTGG+TGG - chr1_4:72545651-72545670 Msa0183580:intron 65.0%
TTTGGGGGAGGGGGGTTCGA+CGG + chr1_4:72547832-72547851 None:intergenic 65.0%
TTGCCCGGTCCGATTGGCGG+CGG + chr1_4:72544758-72544777 None:intergenic 70.0%
CGACCACCACATGCTCCCCC+AGG - chr1_4:72544780-72544799 Msa0183580:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG - chr1_4:72545411-72545430 Msa0183580:intron 70.0%
GGAGGAGGAGGAGGAGGAGG+GGG - chr1_4:72545411-72545430 Msa0183580:intron 70.0%
! GGAGGAGGAGGAGGGGGTGT+AGG - chr1_4:72545420-72545439 Msa0183580:intron 70.0%
!! GGTGCTGGTGGTGGTGGAGC+AGG - chr1_4:72545657-72545676 Msa0183580:intron 70.0%
!! GCTGGTGGTGGTGGAGCAGG+AGG - chr1_4:72545660-72545679 Msa0183580:intron 70.0%
TCGGCGCAGCCGCCGCCAAT+CGG - chr1_4:72544746-72544765 Msa0183580:CDS 75.0%
GCAGCCGCCGCCAATCGGAC+CGG - chr1_4:72544751-72544770 Msa0183580:CDS 75.0%
CAGCCGCCGCCAATCGGACC+GGG - chr1_4:72544752-72544771 Msa0183580:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 72541445 72548003 72541445 ID=Msa0183580;Name=Msa0183580
chr1_4 mRNA 72541445 72548003 72541445 ID=Msa0183580-mRNA-1;Parent=Msa0183580;Name=Msa0183580-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|1|0.66|1|0.5|0.33|3|299|526
chr1_4 exon 72541445 72541722 72541445 ID=Msa0183580-mRNA-1:exon:24547;Parent=Msa0183580-mRNA-1
chr1_4 exon 72543732 72544926 72543732 ID=Msa0183580-mRNA-1:exon:24546;Parent=Msa0183580-mRNA-1
chr1_4 exon 72547597 72548003 72547597 ID=Msa0183580-mRNA-1:exon:24545;Parent=Msa0183580-mRNA-1
chr1_4 CDS 72547597 72548003 72547597 ID=Msa0183580-mRNA-1:cds;Parent=Msa0183580-mRNA-1
chr1_4 CDS 72543753 72544926 72543753 ID=Msa0183580-mRNA-1:cds;Parent=Msa0183580-mRNA-1
chr1_4 three_prime_UTR 72543732 72543752 72543732 ID=Msa0183580-mRNA-1:three_prime_utr;Parent=Msa0183580-mRNA-1
chr1_4 three_prime_UTR 72541445 72541722 72541445 ID=Msa0183580-mRNA-1:three_prime_utr;Parent=Msa0183580-mRNA-1
Gene Sequence

>Msa0183580

ATGGAAACAGATCCAGATGCAGAGGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTTATTTGTGAGGTATGCAACAAAGGGTTCCAAAGAGAGCAAAACCTACAGCTTCACAGAAGAGGACACAACTTGCCTTGGAAGCTTAAGCAGAAGACTACAAAAGAGCCTAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGCGTTCATCATGACCCTTCAAGGGCACTTGGTGACCTCACTGGGATTAAGAAACACTACTCTCGCAAACATGGTGAGAAGAAATGGAAGTGTGATAAGTGCTCTAAGAAGTATGCTGTTCAATCTGATTGGAAGGCACATTCTAAGACTTGTGGCACCAGAGAATATAGGTGTGACTGTGGCACTCTCTTCTCCAGGAGAGACAGTTTCATAACTCACAGAGCCTTCTGTGATGCATTGGCTCAAGAGGGTCCAAGACAGCCACCAATTTCTCTAACTGGTGCCATTGGATCTCATCTCTATGGAAGCTCAAGCAACAACAACACCATGGGTCTAAGCATAGCCCAGGTAGCTGCACAAATGCCCAACATGCAACAACAACAAGACCACCACAGCAATTCAGCTACTGAAATCTTGAGACTCGGCGCAGCCGCCGCCAATCGGACCGGGCAATTCGACCACCACATGCTCCCCCAGGCTACTTTCAGACCTAACGCCTTCTTCAACAATAACATTCATGAGCCAAACCAAAACTTTGTTCCTCATGATCCTTCCCAACAACAAGGTTTAATGATGCAGAATAGCCACAATAGCAACAACAGCAATCTCTTCAACATTCCGAATTTCCTTTCAAGTAACAGTACTAACAGTAGCAACAACTCATTCTCTGAACACTTGAATGTGAATAATGAAGGAACAAATTTCTTCAATGGATCAGCTGGAACAAGTAGTGCTCCATCACTCTTCAGCAATGTTTTCTCCCAAGGAGGAAACAGTAACATTAATGCTGCTGGTACTGCTATATCATCAATGTCAGCAACTGCACTTCTTCAGAAAGCTGCTCAAATGGGTGCAACTTCAAGTAATGGAAATGGCACTACCGCGACTTCTCTTCTCAAAAGCTTTGGAAACAATACTGGTGCAAGTAACTCAGCATCTTCTGGTGGCGGTGATCCTAGCAGAGTGCAAATGGGTGGTGGAAGTGGGAACTATGGTTTTGGTGGTGGGAATCATGAACAGAGTAACTTGCAGGATTTGATGAACTCTTTTGCTGCTACAGGAAATACTTCAATATTTGATCAAAGTGGAGGAGGAGGAGGAGGAGGAGGGGGTGTAGGGCTTGGAAGAGGAGGTGGTGATAGCAGTCAGCTGACTCGTGACTTTTTAGGTGTTGGTCATGAGATTGTGAGAAGCATGAGTGGTGTTGTTGGAGGAGGAGGAGGACAAAGGGATCAACATGCAGCTGCTTTTAACTTGGCAGCTTCTTTGGAAGGAGATCAGAGAAACAATATCAATGCTGCTGCTGCACAATCATTTAGAGGAGGAAGAGGAGGTGCTGGTGGTGGTGGAGCAGGAGGAAATTTTCATTGA
Protein sequence

>Msa0183580

METDPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQEGPRQPPISLTGAIGSHLYGSSSNNNTMGLSIAQVAAQMPNMQQQQDHHSNSATEILRLGAAAANRTGQFDHHMLPQATFRPNAFFNNNIHEPNQNFVPHDPSQQQGLMMQNSHNSNNSNLFNIPNFLSSNSTNSSNNSFSEHLNVNNEGTNFFNGSAGTSSAPSLFSNVFSQGGNSNINAAGTAISSMSATALLQKAAQMGATSSNGNGTTATSLLKSFGNNTGASNSASSGGGDPSRVQMGGGSGNYGFGGGNHEQSNLQDLMNSFAATGNTSIFDQSGGGGGGGGGVGLGRGGGDSSQLTRDFLGVGHEIVRSMSGVVGGGGGQRDQHAAAFNLAASLEGDQRNNINAAAAQSFRGGRGGAGGGGAGGNFH*