AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0098200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0098200 MtrunA17_Chr1g0210821 96.743 522 11 4 4 523 54 571 0.0 1017
Msa0098200 MtrunA17_Chr1g0162971 57.975 395 110 15 4 388 51 399 8.69e-131 387
Msa0098200 MtrunA17_Chr1g0199101 48.889 495 194 14 4 480 57 510 1.33e-125 377
Msa0098200 MtrunA17_Chr1g0163001 45.572 542 174 19 5 498 54 522 3.37e-123 371
Msa0098200 MtrunA17_Chr4g0040571 45.436 493 203 17 4 473 49 498 1.21e-108 333
Msa0098200 MtrunA17_Chr2g0330171 89.542 153 16 0 4 156 56 208 3.18e-105 323
Msa0098200 MtrunA17_Chr8g0342421 88.889 153 17 0 4 156 72 224 5.10e-105 324
Msa0098200 MtrunA17_Chr7g0263941 87.582 153 19 0 4 156 44 196 2.46e-104 318
Msa0098200 MtrunA17_Chr1g0181381 83.851 161 25 1 4 163 48 208 4.37e-102 316
Msa0098200 MtrunA17_Chr7g0268961 83.871 155 25 0 2 156 30 184 9.06e-102 315
Msa0098200 MtrunA17_Chr8g0373541 84.667 150 23 0 4 153 43 192 2.31e-100 312
Msa0098200 MtrunA17_Chr1g0185121 47.849 372 102 10 4 366 50 338 7.37e-100 308
Msa0098200 MtrunA17_Chr1g0191991 85.333 150 22 0 4 153 73 222 2.12e-99 310
Msa0098200 MtrunA17_Chr4g0029521 75.294 170 39 2 4 170 48 217 5.25e-97 302
Msa0098200 MtrunA17_Chr1g0151351 82.119 151 26 1 4 153 51 201 2.30e-95 297
Msa0098200 MtrunA17_Chr2g0326381 81.169 154 28 1 4 156 42 195 1.95e-94 293
Msa0098200 MtrunA17_Chr3g0141431 75.676 148 35 1 4 150 32 179 1.84e-86 272
Msa0098200 MtrunA17_Chr2g0324991 83.206 131 22 0 5 135 3 133 4.92e-86 262
Msa0098200 MtrunA17_Chr8g0375521 52.020 198 93 2 4 199 37 234 1.00e-70 232
Msa0098200 MtrunA17_Chr6g0479921 62.329 146 54 1 4 148 39 184 2.28e-68 227
Msa0098200 MtrunA17_Chr1g0200421 35.762 151 85 4 8 146 236 386 2.71e-24 106
Msa0098200 MtrunA17_Chr3g0123941 29.843 191 120 5 4 186 118 302 5.06e-22 97.1
Msa0098200 MtrunA17_Chr2g0320341 34.868 152 85 4 6 143 227 378 1.65e-21 96.7
Msa0098200 MtrunA17_Chr8g0352011 36.301 146 83 5 10 146 166 310 1.22e-19 90.5
Msa0098200 MtrunA17_Chr5g0422571 35.417 144 82 4 15 148 106 248 1.33e-19 89.4
Msa0098200 MtrunA17_Chr7g0258011 33.540 161 89 6 10 153 176 335 3.86e-19 89.0
Msa0098200 MtrunA17_Chr1g0198651 35.862 145 78 5 15 146 107 249 6.38e-19 87.4
Msa0098200 MtrunA17_Chr4g0053341 33.775 151 90 4 5 146 69 218 1.37e-18 85.1
Msa0098200 MtrunA17_Chr8g0382121 31.757 148 90 5 7 143 109 256 2.06e-18 86.3
Msa0098200 MtrunA17_Chr1g0173841 34.932 146 85 5 10 146 215 359 2.12e-18 87.4
Msa0098200 MtrunA17_Chr2g0328921 33.562 146 87 5 10 146 138 282 8.40e-18 84.3
Msa0098200 MtrunA17_Chr2g0321291 34.694 147 84 5 10 146 133 277 2.34e-17 83.2
Msa0098200 MtrunA17_Chr4g0026521 34.014 147 85 5 10 146 118 262 4.25e-17 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0098200 AT2G02070.2 48.593 533 151 20 6 470 64 541 1.71e-125 380
Msa0098200 AT2G02070.1 48.593 533 151 20 6 470 64 541 1.71e-125 380
Msa0098200 AT2G02080.1 47.071 478 168 15 4 461 64 476 2.76e-120 363
Msa0098200 AT2G02080.4 47.071 478 168 15 4 461 64 476 2.76e-120 363
Msa0098200 AT2G02080.5 47.071 478 168 15 4 461 64 476 2.76e-120 363
Msa0098200 AT2G02080.3 47.071 478 168 15 4 461 64 476 2.76e-120 363
Msa0098200 AT2G02080.6 46.121 464 165 14 18 461 1 399 4.04e-111 337
Msa0098200 AT2G02080.2 46.121 464 165 14 18 461 1 399 4.04e-111 337
Msa0098200 AT1G14580.1 86.335 161 22 0 4 164 63 223 5.11e-107 328
Msa0098200 AT1G14580.2 86.335 161 22 0 4 164 63 223 5.11e-107 328
Msa0098200 AT1G14580.3 86.335 161 22 0 4 164 77 237 9.77e-107 327
Msa0098200 AT5G66730.1 42.553 470 210 10 4 464 42 460 4.83e-106 326
Msa0098200 AT1G03840.1 45.155 485 220 15 4 473 51 504 4.35e-105 324
Msa0098200 AT5G44160.2 43.096 478 210 12 1 473 5 425 7.03e-105 321
Msa0098200 AT1G03840.2 44.948 485 221 15 4 473 49 502 2.36e-104 322
Msa0098200 AT5G44160.1 43.158 475 208 11 4 473 47 464 2.42e-104 321
Msa0098200 AT3G50700.1 85.621 153 22 0 4 156 44 196 2.63e-102 315
Msa0098200 AT3G45260.2 86.364 154 20 1 4 156 49 202 3.74e-99 307
Msa0098200 AT3G45260.1 86.364 154 20 1 4 156 49 202 3.74e-99 307
Msa0098200 AT5G03150.1 83.019 159 26 1 4 161 63 221 2.44e-98 306
Msa0098200 AT3G13810.6 83.544 158 25 1 4 160 61 218 9.49e-98 305
Msa0098200 AT1G55110.3 83.439 157 25 1 4 159 73 229 1.14e-97 303
Msa0098200 AT1G55110.1 83.439 157 25 1 4 159 73 229 1.14e-97 303
Msa0098200 AT1G55110.2 83.439 157 25 1 4 159 73 229 1.14e-97 303
Msa0098200 AT3G13810.4 83.544 158 25 1 4 160 80 237 1.16e-97 305
Msa0098200 AT3G13810.1 83.544 158 25 1 4 160 80 237 1.16e-97 305
Msa0098200 AT3G13810.5 83.544 158 25 1 4 160 75 232 1.27e-97 305
Msa0098200 AT4G02670.1 83.766 154 24 1 4 156 63 216 3.59e-97 300
Msa0098200 AT4G02670.2 83.766 154 24 1 4 156 65 218 3.94e-97 300
Msa0098200 AT3G13810.3 83.439 157 25 1 5 160 68 224 5.11e-97 303
Msa0098200 AT3G13810.2 83.439 157 25 1 5 160 82 238 6.13e-97 303
Msa0098200 AT5G60470.2 81.169 154 28 1 4 156 54 207 3.36e-95 297
Msa0098200 AT5G60470.3 81.169 154 28 1 4 156 50 203 3.62e-95 297
Msa0098200 AT5G60470.1 78.981 157 32 1 1 156 42 198 8.85e-95 296
Msa0098200 AT2G01940.1 60.366 164 61 3 4 163 54 217 1.34e-69 230
Msa0098200 AT1G25250.1 62.162 148 53 2 3 147 19 166 3.42e-68 224
Msa0098200 AT1G25250.3 61.905 147 53 2 4 147 43 189 1.83e-67 223
Msa0098200 AT1G68130.1 62.329 146 53 2 4 147 51 196 3.03e-67 223
Msa0098200 AT2G01940.3 59.639 166 60 5 4 163 54 218 6.64e-66 220
Msa0098200 AT2G01940.2 57.812 128 50 3 40 163 1 128 6.72e-46 164
Msa0098200 AT1G68130.2 61.818 110 40 2 40 147 1 110 1.52e-44 160
Msa0098200 AT1G25250.2 60.360 111 41 2 40 147 1 111 8.84e-44 157
Msa0098200 AT1G34370.3 33.987 153 87 3 8 146 19 171 2.05e-23 100
Msa0098200 AT1G34370.2 33.987 153 87 3 8 146 229 381 3.36e-23 103
Msa0098200 AT1G34370.1 33.987 153 87 3 8 146 229 381 3.36e-23 103
Msa0098200 AT5G22890.1 31.737 167 99 5 8 159 202 368 1.34e-21 97.1
Msa0098200 AT1G13290.1 35.570 149 82 6 15 151 93 239 2.33e-18 86.3
Msa0098200 AT1G51220.1 32.877 146 88 5 10 146 165 309 3.24e-18 86.3
Msa0098200 AT3G57670.1 34.247 146 86 5 10 146 204 348 3.56e-18 87.0
Msa0098200 AT3G20880.1 33.562 146 87 5 10 146 243 387 6.88e-18 86.3
Msa0098200 AT1G34790.1 35.333 150 85 6 7 146 129 276 1.20e-17 84.3
Msa0098200 AT1G08290.1 36.765 136 73 6 22 146 179 312 1.59e-16 81.3

Find 139 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCTGTTTGTTGCCATTA+GGG 0.258326 1_3:-4139361 None:intergenic
AAGAAGCTTCAATAAAATTC+AGG 0.266894 1_3:-4145671 None:intergenic
ACTTGATCTAATTAAAGATT+TGG 0.270733 1_3:+4145620 Msa0098200:three_prime_UTR
GTTTGTTGCCATTAGGGTCT+TGG 0.290354 1_3:-4139355 None:intergenic
GATCATGAGGAACAAAGTTT+TGG 0.296420 1_3:-4142730 None:intergenic
ATGGCACCAGTTAGAGAAAT+TGG 0.304925 1_3:-4142467 None:intergenic
AGCATCATCTTCCTACTAAA+AGG 0.316308 1_3:+4143564 Msa0098200:exon
TGGGCATTTGTGCAGCTACC+TGG 0.317019 1_3:-4142547 None:intergenic
TAAACCTGTTTGTTGCCATT+AGG 0.329788 1_3:-4139362 None:intergenic
TAATGTTACTGTTTCCTCCT+TGG 0.332632 1_3:-4142964 None:intergenic
GGTGCTGGTGGTGGTGGAGC+AGG 0.337056 1_3:+4143526 Msa0098200:CDS
CAAAGTGGAGGAGGAGGAGG+AGG 0.344709 1_3:+4143283 Msa0098200:CDS
GCCATTGGATCTCATCTCTA+TGG 0.345561 1_3:+4142485 Msa0098200:CDS
AATGTTACTGTTTCCTCCTT+GGG 0.349156 1_3:-4142963 None:intergenic
GCAAGTAACTCAGCATCTTC+TGG 0.352752 1_3:+4143124 Msa0098200:CDS
ACTTCTCTTCTCAAAAGCTT+TGG 0.354902 1_3:+4143088 Msa0098200:CDS
TTTGTTGCCATTAGGGTCTT+GGG 0.357166 1_3:-4139354 None:intergenic
AGAGGAGGTGCTGGTGGTGG+TGG 0.360705 1_3:+4143520 Msa0098200:CDS
TCTTGTTGTTGTTGCATGTT+GGG 0.364031 1_3:-4142566 None:intergenic
ATCAATGCTGCACAATCATT+TGG 0.366618 1_3:+4143490 Msa0098200:CDS
CACAGATAAACCTTTCTCTT+AGG 0.370336 1_3:-4139489 None:intergenic
TCTTCAGAAAGCTGCTCAAA+TGG 0.372700 1_3:+4143030 Msa0098200:CDS
GGTGGTGGAAGTGGGAACTA+TGG 0.381676 1_3:+4143175 Msa0098200:CDS
GAAGGAACAAATTTCTTCAA+TGG 0.382802 1_3:+4142893 Msa0098200:CDS
GGAAGTGGGAACTATGGTTT+TGG 0.392846 1_3:+4143181 Msa0098200:CDS
GCAGCCGCCGCCAATCGGAC+CGG 0.393198 1_3:+4142629 Msa0098200:CDS
CATCATTAAACCTTGTTGTT+GGG 0.395369 1_3:-4142756 None:intergenic
AGTGGTGTTGTTGGAGGAGG+AGG 0.395753 1_3:+4143397 Msa0098200:CDS
CTGTTACTTGAAAGGAAATT+CGG 0.396306 1_3:-4142821 None:intergenic
GCAAACATGGTGAGAAGAAA+TGG 0.396336 1_3:+4139589 Msa0098200:CDS
GCATCATTAAACCTTGTTGT+TGG 0.396925 1_3:-4142757 None:intergenic
GGTGTAGGGCTTGGAAGAGG+AGG 0.397969 1_3:+4143310 Msa0098200:CDS
CAGCCACCAATTTCTCTAAC+TGG 0.400711 1_3:+4142461 Msa0098200:CDS
AGTGCTATCACCTCTGCATC+TGG 0.401274 1_3:-4139327 None:intergenic
AGAGAAATTGGTGGCTGTCT+TGG 0.401882 1_3:-4142455 None:intergenic
GGAAGAGGAGGTGCTGGTGG+TGG 0.401937 1_3:+4143517 Msa0098200:CDS
AAAAGCTTTGGAAACAATAC+TGG 0.403135 1_3:+4143100 Msa0098200:CDS
GATCAAAGTGGAGGAGGAGG+AGG 0.417269 1_3:+4143280 Msa0098200:CDS
TGATCCTAGCAGAGTGCAAA+TGG 0.420116 1_3:+4143153 Msa0098200:CDS
CAGCCGCCGCCAATCGGACC+GGG 0.427027 1_3:+4142630 Msa0098200:CDS
GGAGGAGGAAGAGGAGGTGC+TGG 0.428094 1_3:+4143511 Msa0098200:CDS
GTCGAATTGCCCGGTCCGAT+TGG 0.429459 1_3:-4142639 None:intergenic
GTCTTGTTGTTGTTGCATGT+TGG 0.430394 1_3:-4142567 None:intergenic
GGTGTTGTTGGAGGAGGAGG+AGG 0.431211 1_3:+4143400 Msa0098200:CDS
TCGGCGCAGCCGCCGCCAAT+CGG 0.440183 1_3:+4142624 Msa0098200:CDS
TCATGAACAGAGTAACTTGC+AGG 0.442583 1_3:+4143213 Msa0098200:CDS
GCGTTCATCATGACCCTTCA+AGG 0.451309 1_3:+4139526 Msa0098200:CDS
GTGCAAATGGGTGGTGGAAG+TGG 0.451777 1_3:+4143166 Msa0098200:CDS
AGGGCACTTGGTGACCTCAC+TGG 0.452289 1_3:+4139546 Msa0098200:CDS
AATTTCTTCAATGGATCAGC+TGG 0.456222 1_3:+4142902 Msa0098200:CDS
CAGAGCCTTCTGTGATGCAT+TGG 0.460268 1_3:+4142421 Msa0098200:CDS
TTTGATCAAAGTGGAGGAGG+AGG 0.461762 1_3:+4143277 Msa0098200:CDS
CCAATAACAAAATCTATAAC+CGG 0.463076 1_3:-4145819 None:intergenic
CAATCATTTGGAGGAGGAAG+AGG 0.464548 1_3:+4143502 Msa0098200:CDS
AGTATGCTGTTCAATCTGAT+TGG 0.466037 1_3:+4139634 Msa0098200:CDS
ATTTCTCTAACTGGTGCCAT+TGG 0.468145 1_3:+4142470 Msa0098200:CDS
CTGTGATGCATTGGCTCAAG+AGG 0.473610 1_3:+4142430 Msa0098200:CDS
CGTTAGGTCTGAAAGTAGCC+TGG 0.474282 1_3:-4142676 None:intergenic
GTAGGGCTTGGAAGAGGAGG+TGG 0.476945 1_3:+4143313 Msa0098200:CDS
CTTCAGAAAGCTGCTCAAAT+GGG 0.479620 1_3:+4143031 Msa0098200:CDS
TTTGTGAGGTATGCAACAAA+GGG 0.479716 1_3:+4139385 Msa0098200:CDS
ATGAATGTTATTGTTGAAGA+AGG 0.481652 1_3:-4142699 None:intergenic
ACTATCTCCCAAGACCCTAA+TGG 0.482980 1_3:+4139347 Msa0098200:CDS
AGAAGCATGAGTGGTGTTGT+TGG 0.483138 1_3:+4143388 Msa0098200:CDS
GCAACTTCAAGTAATGGAAA+TGG 0.483733 1_3:+4143055 Msa0098200:CDS
GGAGGAAGAGGAGGTGCTGG+TGG 0.484284 1_3:+4143514 Msa0098200:CDS
GATTGCTGTTGTTGCTATTG+TGG 0.486706 1_3:-4142787 None:intergenic
AGACCCTAATGGCAACAAAC+AGG 0.487796 1_3:+4139358 Msa0098200:CDS
TGATGAACGCATGTGGGCTC+AGG 0.492840 1_3:-4139513 None:intergenic
CATGTGGTGGTCGAATTGCC+CGG 0.492902 1_3:-4142648 None:intergenic
TACAAAAGAGCCTAAGAGAA+AGG 0.500506 1_3:+4139479 Msa0098200:CDS
ACAGTCACACCTATATTCTC+TGG 0.503404 1_3:-4139682 None:intergenic
AACAGTAACATTAATGCTGC+TGG 0.504605 1_3:+4142974 Msa0098200:CDS
ATTAAACCTTGTTGTTGGGA+AGG 0.505891 1_3:-4142752 None:intergenic
GGGCACTTGGTGACCTCACT+GGG 0.506772 1_3:+4139547 Msa0098200:CDS
TTATTGTTGAAGAAGGCGTT+AGG 0.509288 1_3:-4142692 None:intergenic
ATGGGTGCAACTTCAAGTAA+TGG 0.513566 1_3:+4143049 Msa0098200:CDS
TGTTAGTACTGTTACTTGAA+AGG 0.514803 1_3:-4142829 None:intergenic
CATGACCCTTCAAGGGCACT+TGG 0.515364 1_3:+4139534 Msa0098200:CDS
AATTTGGCAGCTTCTTTGGA+AGG 0.518324 1_3:+4143451 Msa0098200:CDS
GAAGAGGACACAACTTGCCT+TGG 0.519873 1_3:+4139439 Msa0098200:CDS
GGGCATTTGTGCAGCTACCT+GGG 0.522215 1_3:-4142546 None:intergenic
AGCAGAGTGCAAATGGGTGG+TGG 0.522557 1_3:+4143160 Msa0098200:CDS
GTCTTCTGCTTAAGCTTCCA+AGG 0.523295 1_3:-4139456 None:intergenic
AACAAACAGGTTTATTTGTG+AGG 0.525054 1_3:+4139371 Msa0098200:CDS
GAATTGCCCGGTCCGATTGG+CGG 0.525454 1_3:-4142636 None:intergenic
AGCATGAGTGGTGTTGTTGG+AGG 0.531782 1_3:+4143391 Msa0098200:CDS
CTGGGCTATGCTTAGACCCA+TGG 0.532898 1_3:-4142528 None:intergenic
TTGCCCGGTCCGATTGGCGG+CGG 0.533309 1_3:-4142633 None:intergenic
ATGAGTGGTGTTGTTGGAGG+AGG 0.534700 1_3:+4143394 Msa0098200:CDS
ACTGTGGCACTCTCTTCTCC+AGG 0.535575 1_3:+4139700 Msa0098200:CDS
ATTTGTGAGGTATGCAACAA+AGG 0.537155 1_3:+4139384 Msa0098200:CDS
GCTGGTGGTGGTGGAGCAGG+AGG 0.537179 1_3:+4143529 Msa0098200:CDS
CCACCCATTTGCACTCTGCT+AGG 0.537342 1_3:-4143157 None:intergenic
TGCTGTTCAATCTGATTGGA+AGG 0.548901 1_3:+4139638 Msa0098200:CDS
AAAACATTGCTGAAGAGTGA+TGG 0.549747 1_3:-4142938 None:intergenic
ATATTTGATCAAAGTGGAGG+AGG 0.551599 1_3:+4143274 Msa0098200:CDS
CACTTGAATGTGAATAATGA+AGG 0.553613 1_3:+4142875 Msa0098200:CDS
AACTCAGCATCTTCTGGTGG+CGG 0.555348 1_3:+4143130 Msa0098200:CDS
GTCCTCTTCTGTGAAGCTGT+AGG 0.557568 1_3:-4139425 None:intergenic
ACTTCAATATTTGATCAAAG+TGG 0.557815 1_3:+4143268 Msa0098200:CDS
TGCAAATGGGTGGTGGAAGT+GGG 0.558745 1_3:+4143167 Msa0098200:CDS
AACCTACAGCTTCACAGAAG+AGG 0.559175 1_3:+4139423 Msa0098200:CDS
AGGTCACCAAGTGCCCTTGA+AGG 0.560455 1_3:-4139540 None:intergenic
GTTAGGTCTGAAAGTAGCCT+GGG 0.562635 1_3:-4142675 None:intergenic
AATGCTGCACAATCATTTGG+AGG 0.572623 1_3:+4143493 Msa0098200:CDS
CAGTAGCTGAATTGCTGTGG+TGG 0.574152 1_3:-4142589 None:intergenic
AGAGCACAGTGATGCATATG+TGG 0.574545 1_3:+4145643 Msa0098200:three_prime_UTR
AAACACTACTCTCGCAAACA+TGG 0.582241 1_3:+4139576 Msa0098200:CDS
TGTGATGCATTGGCTCAAGA+GGG 0.582830 1_3:+4142431 Msa0098200:CDS
CATGATCCTTCCCAACAACA+AGG 0.585888 1_3:+4142746 Msa0098200:CDS
TCAATATTTGATCAAAGTGG+AGG 0.596270 1_3:+4143271 Msa0098200:CDS
CTTGTGGCACCAGAGAATAT+AGG 0.598109 1_3:+4139673 Msa0098200:CDS
GATCCTAGCAGAGTGCAAAT+GGG 0.599256 1_3:+4143154 Msa0098200:CDS
TTGAGCCAATGCATCACAGA+AGG 0.600273 1_3:-4142426 None:intergenic
CATGGGTCTAAGCATAGCCC+AGG 0.603094 1_3:+4142529 Msa0098200:CDS
TCCATAGAGATGAGATCCAA+TGG 0.603687 1_3:-4142486 None:intergenic
GGTCACCAAGTGCCCTTGAA+GGG 0.610749 1_3:-4139539 None:intergenic
GCTGCACAATCATTTGGAGG+AGG 0.614779 1_3:+4143496 Msa0098200:CDS
CGTTCATCATGACCCTTCAA+GGG 0.615083 1_3:+4139527 Msa0098200:CDS
TCATTTGGAGGAGGAAGAGG+AGG 0.625621 1_3:+4143505 Msa0098200:CDS
GGAAACAGATCCAGATGCAG+AGG 0.628242 1_3:+4139317 Msa0098200:CDS
GCTACTGAAATCTTGAGACT+CGG 0.628908 1_3:+4142605 Msa0098200:CDS
TCAAGCAACAACAACACCAT+GGG 0.629958 1_3:+4142512 Msa0098200:CDS
GCACCAGTTAGAGAAATTGG+TGG 0.631481 1_3:-4142464 None:intergenic
AAGGCACATTCTAAGACTTG+TGG 0.632080 1_3:+4139657 Msa0098200:CDS
CTCAAGCAACAACAACACCA+TGG 0.635294 1_3:+4142511 Msa0098200:CDS
TGTTGTTGGGAAGGATCATG+AGG 0.647582 1_3:-4142743 None:intergenic
AGGGTCATGATGAACGCATG+TGG 0.655416 1_3:-4139520 None:intergenic
GAGATTGTGAGAAGCATGAG+TGG 0.666823 1_3:+4143379 Msa0098200:CDS
AGTAACTCAGCATCTTCTGG+TGG 0.670356 1_3:+4143127 Msa0098200:CDS
GAGCACAGTGATGCATATGT+GGG 0.676016 1_3:+4145644 Msa0098200:three_prime_UTR
GGGTCATGATGAACGCATGT+GGG 0.680517 1_3:-4139519 None:intergenic
TTAGGTCTGAAAGTAGCCTG+GGG 0.680570 1_3:-4142674 None:intergenic
AGAGAATATAGGTGTGACTG+TGG 0.696795 1_3:+4139684 Msa0098200:CDS
TTTCAGTAGCTGAATTGCTG+TGG 0.697116 1_3:-4142592 None:intergenic
CCTAGCAGAGTGCAAATGGG+TGG 0.714810 1_3:+4143157 Msa0098200:CDS
AGTGTTTCTTAATCCCAGTG+AGG 0.718099 1_3:-4139560 None:intergenic
TAGGTCTGAAAGTAGCCTGG+GGG 0.734494 1_3:-4142673 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATACTATATAATTAGA+AGG - chr1_3:4141877-4141896 None:intergenic 10.0%
!!! ATAGTATTTTATTTTTTATG+AGG + chr1_3:4141886-4141905 Msa0098200:intron 10.0%
!! TTAAGTCTATTAAAAAAAAA+TGG + chr1_3:4142082-4142101 Msa0098200:intron 10.0%
!! ATAATTAATGAATATTGTAA+TGG + chr1_3:4142329-4142348 Msa0098200:intron 10.0%
!!! GTTTTTAAAATACTATTTTA+AGG + chr1_3:4144010-4144029 Msa0098200:intron 10.0%
!!! TAAAAATATTTTTATGATTG+AGG - chr1_3:4144445-4144464 None:intergenic 10.0%
!!! AATCATAAAAATATTTTTAC+TGG + chr1_3:4144446-4144465 Msa0098200:intron 10.0%
!!! TTCTTTTTTTGATATATTTT+TGG + chr1_3:4144870-4144889 Msa0098200:intron 10.0%
!!! ATTTTATTTTATTTTTTTGG+GGG - chr1_3:4145717-4145736 None:intergenic 10.0%
!!! TTTTGTGAATGAAAAATAAT+GGG - chr1_3:4140743-4140762 None:intergenic 15.0%
!!! GCATAAAATTTTGATTAAAT+TGG - chr1_3:4140866-4140885 None:intergenic 15.0%
!! TAAGAATATATTCAATGTTA+AGG - chr1_3:4141182-4141201 None:intergenic 15.0%
!!! AATAAATTTGTTGAAAATGA+TGG - chr1_3:4141613-4141632 None:intergenic 15.0%
!!! TCTACAATTTTAACAAATTT+TGG + chr1_3:4143915-4143934 Msa0098200:intron 15.0%
!!! GTAAATACTCTTTTATATAT+TGG + chr1_3:4144211-4144230 Msa0098200:intron 15.0%
!!! TAATACTAATTTAGTTTAGA+AGG - chr1_3:4144593-4144612 None:intergenic 15.0%
!! TTGAAAATGAAACTTATATT+AGG + chr1_3:4144683-4144702 Msa0098200:intron 15.0%
!! AAGAAAGTAAAAAATTGAAA+AGG - chr1_3:4144855-4144874 None:intergenic 15.0%
!!! TTTTTTGATATATTTTTGGT+TGG + chr1_3:4144874-4144893 Msa0098200:intron 15.0%
!!! TTTTCTATGTTACTATATTT+GGG + chr1_3:4145079-4145098 Msa0098200:intron 15.0%
!!! TTAATTAGATCAAGTTTTAA+TGG - chr1_3:4145615-4145634 None:intergenic 15.0%
!!! ATTTTATTAGATTTTGCTAT+TGG + chr1_3:4145772-4145791 Msa0098200:three_prime_UTR 15.0%
!! AAATAACTGTTTGACAAAAA+TGG - chr1_3:4139902-4139921 None:intergenic 20.0%
!! TCTTTATTATCTAGTGAATT+TGG + chr1_3:4140040-4140059 Msa0098200:intron 20.0%
!!! TTGATTTGATTAAGATTCTA+TGG + chr1_3:4140108-4140127 Msa0098200:intron 20.0%
!!! TGTTTCAATATTTGTTAGTA+CGG + chr1_3:4140154-4140173 Msa0098200:intron 20.0%
!!! ATGGTTTTTGAAGTTTATTT+TGG + chr1_3:4140628-4140647 Msa0098200:intron 20.0%
!!! GTTTTGTGAATGAAAAATAA+TGG - chr1_3:4140744-4140763 None:intergenic 20.0%
!! AAGAAACACTAAAATTATGT+TGG - chr1_3:4140815-4140834 None:intergenic 20.0%
!!! TTGAATCGTATGATTTTAAT+TGG + chr1_3:4140988-4141007 Msa0098200:intron 20.0%
!!! TTATTGTCTTTTACTTGAAA+AGG + chr1_3:4141490-4141509 Msa0098200:intron 20.0%
!! TAGTAATCTATGTATAATTC+AGG + chr1_3:4141527-4141546 Msa0098200:intron 20.0%
!!! TTTACTTTTTAGGATAAAAC+TGG - chr1_3:4142028-4142047 None:intergenic 20.0%
!! TAACTAGGTATAATAATAGT+TGG - chr1_3:4142255-4142274 None:intergenic 20.0%
!! ACAAGAAAAAATTGTATGAA+AGG - chr1_3:4142287-4142306 None:intergenic 20.0%
!! ATATATACCTTAAAGTCAAA+TGG + chr1_3:4144148-4144167 Msa0098200:intron 20.0%
!!! CTTTTCTATGTTACTATATT+TGG + chr1_3:4145078-4145097 Msa0098200:intron 20.0%
!! TTTCTATGTTACTATATTTG+GGG + chr1_3:4145080-4145099 Msa0098200:intron 20.0%
!!! TAGCTTAATTTTATCTAATC+AGG + chr1_3:4145112-4145131 Msa0098200:intron 20.0%
!!! TAACCATGTAATTTTTGAAA+CGG + chr1_3:4145536-4145555 Msa0098200:intron 20.0%
!! ACTTGATCTAATTAAAGATT+TGG + chr1_3:4145620-4145639 Msa0098200:three_prime_UTR 20.0%
!!! TATTAGTTTCAAGATTTTCA+TGG + chr1_3:4145746-4145765 Msa0098200:three_prime_UTR 20.0%
!!! GGATATTTTAATTTAACTAC+CGG + chr1_3:4145800-4145819 Msa0098200:three_prime_UTR 20.0%
! GAATTGTTATATATGTTACC+TGG - chr1_3:4139721-4139740 None:intergenic 25.0%
!!! ACACACATGTTTTGTTAATA+TGG + chr1_3:4139763-4139782 Msa0098200:intron 25.0%
!!! TATTTTTTTCAACCACGAAA+TGG + chr1_3:4139917-4139936 Msa0098200:intron 25.0%
!!! ATTTTTTTCAACCACGAAAT+GGG + chr1_3:4139918-4139937 Msa0098200:intron 25.0%
! TATTATCTAGTGAATTTGGT+TGG + chr1_3:4140044-4140063 Msa0098200:intron 25.0%
!! TGATTAAGATTCTATGGTTT+TGG + chr1_3:4140114-4140133 Msa0098200:intron 25.0%
! ATGAGACTCGTATAATTATA+AGG - chr1_3:4140278-4140297 None:intergenic 25.0%
! AGCATAAGAGTAGAATATTA+TGG + chr1_3:4140343-4140362 Msa0098200:intron 25.0%
! GAATAGGATGAAAAAGAAAT+GGG - chr1_3:4140425-4140444 None:intergenic 25.0%
! TGAATAGGATGAAAAAGAAA+TGG - chr1_3:4140426-4140445 None:intergenic 25.0%
! AATAAACTTCAAAAACCATG+TGG - chr1_3:4140627-4140646 None:intergenic 25.0%
!!! ACTATTTTCTTGTTTCTCAT+AGG + chr1_3:4140651-4140670 Msa0098200:intron 25.0%
!!! CTCATAGGTTTTTTATAACA+TGG + chr1_3:4140666-4140685 Msa0098200:intron 25.0%
! CTCATTAAACATGATTAGAT+TGG - chr1_3:4140711-4140730 None:intergenic 25.0%
! CAATCTAATCATGTTTAATG+AGG + chr1_3:4140709-4140728 Msa0098200:intron 25.0%
! TTATATGTTTGAAGACAGAA+TGG + chr1_3:4140836-4140855 Msa0098200:intron 25.0%
! TATATGTTTGAAGACAGAAT+GGG + chr1_3:4140837-4140856 Msa0098200:intron 25.0%
!! TCAAAATTTTATGCAATCAC+CGG + chr1_3:4140872-4140891 Msa0098200:intron 25.0%
!!! TGTTAAGGAATTGATAATGT+AGG - chr1_3:4141167-4141186 None:intergenic 25.0%
! GTAATTAATTTCATTCCACT+TGG + chr1_3:4141299-4141318 Msa0098200:intron 25.0%
! AAGTATCACATTCTTTCATT+TGG + chr1_3:4141434-4141453 Msa0098200:intron 25.0%
! ATACATAGATTACTAGAAGT+GGG - chr1_3:4141522-4141541 None:intergenic 25.0%
! TATACATAGATTACTAGAAG+TGG - chr1_3:4141523-4141542 None:intergenic 25.0%
!! AAAAGCACATAAAATGTACT+AGG - chr1_3:4141705-4141724 None:intergenic 25.0%
!! TTTAATCATTAGTTTCTCAG+AGG - chr1_3:4141739-4141758 None:intergenic 25.0%
!!! TTTTTTCCTATGATTCTAGT+TGG + chr1_3:4141819-4141838 Msa0098200:intron 25.0%
!!! TTTTTCCTATGATTCTAGTT+GGG + chr1_3:4141820-4141839 Msa0098200:intron 25.0%
! ACTTAATTCAAATCGATATG+AGG - chr1_3:4142068-4142087 None:intergenic 25.0%
!! GAAATTGTTGTTAATAACAG+CGG + chr1_3:4142111-4142130 Msa0098200:intron 25.0%
! ATACGAGAACAATTGTAAAA+TGG - chr1_3:4142140-4142159 None:intergenic 25.0%
! GAAAGGAAAATCATTTAACT+AGG - chr1_3:4142270-4142289 None:intergenic 25.0%
! ATGAATGTTATTGTTGAAGA+AGG - chr1_3:4142702-4142721 None:intergenic 25.0%
! ACTTCAATATTTGATCAAAG+TGG + chr1_3:4143268-4143287 Msa0098200:CDS 25.0%
! ATGATTACATTGTGATTAGT+GGG + chr1_3:4143694-4143713 Msa0098200:intron 25.0%
! TAAAAAAGAGCAATGTGAAT+AGG + chr1_3:4143805-4143824 Msa0098200:intron 25.0%
! ACATTGTAAATACCTTTCAA+CGG - chr1_3:4144058-4144077 None:intergenic 25.0%
! AACAATTATGATTGATGGAA+TGG - chr1_3:4144085-4144104 None:intergenic 25.0%
! GATTCAACAATTATGATTGA+TGG - chr1_3:4144090-4144109 None:intergenic 25.0%
! AATGAGACTTATATTTAGAG+AGG + chr1_3:4144322-4144341 Msa0098200:intron 25.0%
!! AGAAATAACATTTTCCTTTG+AGG + chr1_3:4144369-4144388 Msa0098200:intron 25.0%
! ATATCTACCTTAAAGTCAAA+TGG + chr1_3:4144482-4144501 Msa0098200:intron 25.0%
! TATAATATGCATCCATCTAT+TGG + chr1_3:4144628-4144647 Msa0098200:intron 25.0%
! ATGAAACTTATATTAGGAGT+AGG + chr1_3:4144689-4144708 Msa0098200:intron 25.0%
! GTTTATTGAATTTAACACGA+AGG - chr1_3:4145040-4145059 None:intergenic 25.0%
! TATCTACGTATGATATTAGT+TGG + chr1_3:4145175-4145194 Msa0098200:intron 25.0%
! TAAATAATAGACCTAAGTAG+TGG - chr1_3:4145342-4145361 None:intergenic 25.0%
! CTTAGGTCTATTATTTAGAT+TGG + chr1_3:4145345-4145364 Msa0098200:intron 25.0%
! TTACCGTTTCAAAAATTACA+TGG - chr1_3:4145542-4145561 None:intergenic 25.0%
! GTAATTAAGAATGACGATTA+TGG + chr1_3:4145558-4145577 Msa0098200:intron 25.0%
! AAGAAGCTTCAATAAAATTC+AGG - chr1_3:4145674-4145693 None:intergenic 25.0%
!!! TATTTTATTTTTTTGGGGGA+GGG - chr1_3:4145713-4145732 None:intergenic 25.0%
!!! TTATTTTATTTTTTTGGGGG+AGG - chr1_3:4145714-4145733 None:intergenic 25.0%
!!! TAGATTTTGCTATTGGATAA+TGG + chr1_3:4145779-4145798 Msa0098200:three_prime_UTR 25.0%
! CCAATAACAAAATCTATAAC+CGG - chr1_3:4145822-4145841 None:intergenic 25.0%
AACAAACAGGTTTATTTGTG+AGG + chr1_3:4139371-4139390 Msa0098200:CDS 30.0%
!! AATTAACAAGTGCTGAATCT+CGG + chr1_3:4139794-4139813 Msa0098200:intron 30.0%
AGAAGAAATGTGATGTTGTT+TGG + chr1_3:4139942-4139961 Msa0098200:intron 30.0%
! AAATGTGATGTTGTTTGGTT+TGG + chr1_3:4139947-4139966 Msa0098200:intron 30.0%
!! ATGTTGTTTGGTTTGGTTTA+GGG + chr1_3:4139954-4139973 Msa0098200:intron 30.0%
!!! AAGATTCTATGGTTTTGGTA+TGG + chr1_3:4140119-4140138 Msa0098200:intron 30.0%
! AATATTTGTTAGTACGGTGT+GGG + chr1_3:4140160-4140179 Msa0098200:intron 30.0%
TCACAAACAAAAAACACACA+CGG + chr1_3:4140237-4140256 Msa0098200:intron 30.0%
!! TACTCTTATGCTTTTTGACA+AGG - chr1_3:4140335-4140354 None:intergenic 30.0%
! ACCTTTTTCTGATTTTACCT+AGG + chr1_3:4140378-4140397 Msa0098200:intron 30.0%
TCCTAGGTAAAATCAGAAAA+AGG - chr1_3:4140382-4140401 None:intergenic 30.0%
!!! TACGATCTTTGTTTTCTTCT+TGG + chr1_3:4140480-4140499 Msa0098200:intron 30.0%
!!! ATCTTTGTTTTCTTCTTGGT+TGG + chr1_3:4140484-4140503 Msa0098200:intron 30.0%
GTACACAGAAAATATAGAGA+GGG - chr1_3:4140587-4140606 None:intergenic 30.0%
AGTACACAGAAAATATAGAG+AGG - chr1_3:4140588-4140607 None:intergenic 30.0%
!!! TTTTGCTTTTTTCTTCCACA+TGG + chr1_3:4140609-4140628 Msa0098200:intron 30.0%
AACCTAAAACCTTATTCACA+TGG + chr1_3:4140767-4140786 Msa0098200:intron 30.0%
! AACCATGTGAATAAGGTTTT+AGG - chr1_3:4140772-4140791 None:intergenic 30.0%
AATTGGTTACCTTTGATCTT+TGG + chr1_3:4141005-4141024 Msa0098200:intron 30.0%
! TTTTGCAATCCAAAGATCAA+AGG - chr1_3:4141017-4141036 None:intergenic 30.0%
! TTTGACAAGACTTTTCTCAT+TGG - chr1_3:4141063-4141082 None:intergenic 30.0%
TGTGATACTTAATTAACCCA+AGG - chr1_3:4141424-4141443 None:intergenic 30.0%
CACATGTCTTGATTTCAAAA+GGG - chr1_3:4141991-4142010 None:intergenic 30.0%
TCACATGTCTTGATTTCAAA+AGG - chr1_3:4141992-4142011 None:intergenic 30.0%
GTAAATGTGATGAATATTGC+AGG + chr1_3:4142378-4142397 Msa0098200:intron 30.0%
!! CATCATTAAACCTTGTTGTT+GGG - chr1_3:4142759-4142778 None:intergenic 30.0%
! CTGTTACTTGAAAGGAAATT+CGG - chr1_3:4142824-4142843 None:intergenic 30.0%
! TGTTAGTACTGTTACTTGAA+AGG - chr1_3:4142832-4142851 None:intergenic 30.0%
CACTTGAATGTGAATAATGA+AGG + chr1_3:4142875-4142894 Msa0098200:CDS 30.0%
GAAGGAACAAATTTCTTCAA+TGG + chr1_3:4142893-4142912 Msa0098200:CDS 30.0%
!! AAAAGCTTTGGAAACAATAC+TGG + chr1_3:4143100-4143119 Msa0098200:CDS 30.0%
TCAATATTTGATCAAAGTGG+AGG + chr1_3:4143271-4143290 Msa0098200:CDS 30.0%
!!! TTTTAATTTGGCAGCTTCTT+TGG + chr1_3:4143447-4143466 Msa0098200:CDS 30.0%
TCAATTACCTATAGTAACCT+AGG + chr1_3:4143620-4143639 Msa0098200:intron 30.0%
TAACATTCCTAGGTTACTAT+AGG - chr1_3:4143630-4143649 None:intergenic 30.0%
GTAAAACATGTAACATTCCT+AGG - chr1_3:4143640-4143659 None:intergenic 30.0%
GTAATCATCACATGATCATA+TGG - chr1_3:4143682-4143701 None:intergenic 30.0%
GATGATTACATTGTGATTAG+TGG + chr1_3:4143693-4143712 Msa0098200:intron 30.0%
TGATTACATTGTGATTAGTG+GGG + chr1_3:4143695-4143714 Msa0098200:intron 30.0%
AGCAATGTGAATAGGAATTT+AGG + chr1_3:4143813-4143832 Msa0098200:intron 30.0%
GCAATGTGAATAGGAATTTA+GGG + chr1_3:4143814-4143833 Msa0098200:intron 30.0%
AATTGACATTAATTCCACAC+AGG + chr1_3:4143845-4143864 Msa0098200:intron 30.0%
TATATGTAACTACCGTTGAA+AGG + chr1_3:4144043-4144062 Msa0098200:intron 30.0%
! CAATCAACCATTTGACTTTA+AGG - chr1_3:4144158-4144177 None:intergenic 30.0%
! AATAACTTGTATCCATCCAT+TGG + chr1_3:4144294-4144313 Msa0098200:intron 30.0%
TAAGTCTCATTCTAAACCAA+TGG - chr1_3:4144313-4144332 None:intergenic 30.0%
! CAATCAACCATTTGACTTTA+AGG - chr1_3:4144158-4144177 None:intergenic 30.0%
TCTCATTCTAAACCAATAGA+TGG - chr1_3:4144643-4144662 None:intergenic 30.0%
!!! TTGATATATTTTTGGTTGGC+TGG + chr1_3:4144878-4144897 Msa0098200:intron 30.0%
TATTTGTTCAGACACAAGTT+TGG - chr1_3:4144928-4144947 None:intergenic 30.0%
ATTTGTGTGACAAATGTATG+AGG - chr1_3:4144985-4145004 None:intergenic 30.0%
ATTGAATTTAACACGAAGGA+AGG - chr1_3:4145036-4145055 None:intergenic 30.0%
! AAAAAGAGTACAAGAGAATG+CGG - chr1_3:4145389-4145408 None:intergenic 30.0%
TAAGAATGACGATTATGGTT+TGG + chr1_3:4145563-4145582 Msa0098200:intron 30.0%
!!! ATTTTATTTTTTTGGGGGAG+GGG - chr1_3:4145712-4145731 None:intergenic 30.0%
!! CCGGTTATAGATTTTGTTAT+TGG + chr1_3:4145819-4145838 Msa0098200:three_prime_UTR 30.0%
! AAACCTGTTTGTTGCCATTA+GGG - chr1_3:4139364-4139383 None:intergenic 35.0%
! TAAACCTGTTTGTTGCCATT+AGG - chr1_3:4139365-4139384 None:intergenic 35.0%
ATTTGTGAGGTATGCAACAA+AGG + chr1_3:4139384-4139403 Msa0098200:CDS 35.0%
TTTGTGAGGTATGCAACAAA+GGG + chr1_3:4139385-4139404 Msa0098200:CDS 35.0%
TACAAAAGAGCCTAAGAGAA+AGG + chr1_3:4139479-4139498 Msa0098200:CDS 35.0%
CACAGATAAACCTTTCTCTT+AGG - chr1_3:4139492-4139511 None:intergenic 35.0%
AGTATGCTGTTCAATCTGAT+TGG + chr1_3:4139634-4139653 Msa0098200:CDS 35.0%
CGGTAGAATAGACTGTAATA+AGG + chr1_3:4139814-4139833 Msa0098200:intron 35.0%
!! GATGTTGTTTGGTTTGGTTT+AGG + chr1_3:4139953-4139972 Msa0098200:intron 35.0%
TTCTTCAAGTGACTATAGAG+AGG + chr1_3:4139999-4140018 Msa0098200:intron 35.0%
!!! TCTATGGTTTTGGTATGGTT+TGG + chr1_3:4140124-4140143 Msa0098200:intron 35.0%
! CAATATTTGTTAGTACGGTG+TGG + chr1_3:4140159-4140178 Msa0098200:intron 35.0%
! TTTTCAGAGATCATTCACGT+GGG - chr1_3:4140211-4140230 None:intergenic 35.0%
!! AAAATGAAGCACTGTTTCCT+AGG - chr1_3:4140398-4140417 None:intergenic 35.0%
!! GATTAGATTGGTCGTGATTT+TGG - chr1_3:4140699-4140718 None:intergenic 35.0%
GAACTTGAACCATGTGAATA+AGG - chr1_3:4140779-4140798 None:intergenic 35.0%
TAAAATTATGTTGGTCCGAG+TGG - chr1_3:4140806-4140825 None:intergenic 35.0%
ACGATCACAAATCTTTCTAC+CGG - chr1_3:4140894-4140913 None:intergenic 35.0%
! ACACGCAAATTTTTGTCCTT+GGG + chr1_3:4141405-4141424 Msa0098200:intron 35.0%
AATTGCCCAACTAGAATCAT+AGG - chr1_3:4141828-4141847 None:intergenic 35.0%
TCTTGATTTCAAAAGGGATG+GGG - chr1_3:4141985-4142004 None:intergenic 35.0%
GTCTTGATTTCAAAAGGGAT+GGG - chr1_3:4141986-4142005 None:intergenic 35.0%
TGTCTTGATTTCAAAAGGGA+TGG - chr1_3:4141987-4142006 None:intergenic 35.0%
!! TCTTGTTGTTGTTGCATGTT+GGG - chr1_3:4142569-4142588 None:intergenic 35.0%
!! TTATTGTTGAAGAAGGCGTT+AGG - chr1_3:4142695-4142714 None:intergenic 35.0%
!!! TGAGGAACAAAGTTTTGGTT+TGG - chr1_3:4142728-4142747 None:intergenic 35.0%
! GATCATGAGGAACAAAGTTT+TGG - chr1_3:4142733-4142752 None:intergenic 35.0%
!! ATTAAACCTTGTTGTTGGGA+AGG - chr1_3:4142755-4142774 None:intergenic 35.0%
! GCATCATTAAACCTTGTTGT+TGG - chr1_3:4142760-4142779 None:intergenic 35.0%
AATTTCTTCAATGGATCAGC+TGG + chr1_3:4142902-4142921 Msa0098200:CDS 35.0%
AAAACATTGCTGAAGAGTGA+TGG - chr1_3:4142941-4142960 None:intergenic 35.0%
AATGTTACTGTTTCCTCCTT+GGG - chr1_3:4142966-4142985 None:intergenic 35.0%
TAATGTTACTGTTTCCTCCT+TGG - chr1_3:4142967-4142986 None:intergenic 35.0%
AACAGTAACATTAATGCTGC+TGG + chr1_3:4142974-4142993 Msa0098200:CDS 35.0%
! GCAACTTCAAGTAATGGAAA+TGG + chr1_3:4143055-4143074 Msa0098200:CDS 35.0%
ACTTCTCTTCTCAAAAGCTT+TGG + chr1_3:4143088-4143107 Msa0098200:CDS 35.0%
ATATTTGATCAAAGTGGAGG+AGG + chr1_3:4143274-4143293 Msa0098200:CDS 35.0%
!!! ACATGCAGCTGCTTTTAATT+TGG + chr1_3:4143435-4143454 Msa0098200:CDS 35.0%
ATCAATGCTGCACAATCATT+TGG + chr1_3:4143490-4143509 Msa0098200:CDS 35.0%
AGCATCATCTTCCTACTAAA+AGG + chr1_3:4143564-4143583 Msa0098200:exon 35.0%
GATTACATTGTGATTAGTGG+GGG + chr1_3:4143696-4143715 Msa0098200:intron 35.0%
! TTTTCTTGAACAGCGGTAAA+TGG - chr1_3:4143887-4143906 None:intergenic 35.0%
!! GACAACTTTTTCTTGAACAG+CGG - chr1_3:4143894-4143913 None:intergenic 35.0%
TCTCATTCTAAACCAATGGA+TGG - chr1_3:4144309-4144328 None:intergenic 35.0%
GTAGGTACATATATCCTCAA+AGG - chr1_3:4144386-4144405 None:intergenic 35.0%
TATATGTACCTACCGTTGAA+AGG + chr1_3:4144393-4144412 Msa0098200:intron 35.0%
ACCTTGTAAATGCCTTTCAA+CGG - chr1_3:4144408-4144427 None:intergenic 35.0%
AATTTAACACGAAGGAAGGA+AGG - chr1_3:4145032-4145051 None:intergenic 35.0%
TAATAAGTACTCTGCACTCA+TGG - chr1_3:4145452-4145471 None:intergenic 35.0%
!!! ATTATGGTTTGGCTTTTTGC+AGG + chr1_3:4145574-4145593 Msa0098200:intron 35.0%
!!! TTATGGTTTGGCTTTTTGCA+GGG + chr1_3:4145575-4145594 Msa0098200:intron 35.0%
!! GATCAAGTTTTAATGGAGCA+TGG - chr1_3:4145608-4145627 None:intergenic 35.0%
!!! TTTTATTTTTTTGGGGGAGG+GGG - chr1_3:4145711-4145730 None:intergenic 35.0%
TTTGTTGCCATTAGGGTCTT+GGG - chr1_3:4139357-4139376 None:intergenic 40.0%
AGTGTTTCTTAATCCCAGTG+AGG - chr1_3:4139563-4139582 None:intergenic 40.0%
AAACACTACTCTCGCAAACA+TGG + chr1_3:4139576-4139595 Msa0098200:CDS 40.0%
GCAAACATGGTGAGAAGAAA+TGG + chr1_3:4139589-4139608 Msa0098200:CDS 40.0%
TGCTGTTCAATCTGATTGGA+AGG + chr1_3:4139638-4139657 Msa0098200:CDS 40.0%
!! AAGGCACATTCTAAGACTTG+TGG + chr1_3:4139657-4139676 Msa0098200:CDS 40.0%
ACAGTCACACCTATATTCTC+TGG - chr1_3:4139685-4139704 None:intergenic 40.0%
AGAGAATATAGGTGTGACTG+TGG + chr1_3:4139684-4139703 Msa0098200:CDS 40.0%
CAAAACATGTGTGTGTGTGA+AGG - chr1_3:4139757-4139776 None:intergenic 40.0%
CACGATTGTAAGTGAGAGAA+TGG - chr1_3:4139840-4139859 None:intergenic 40.0%
CATTTCTTCTTCCCATTTCG+TGG - chr1_3:4139932-4139951 None:intergenic 40.0%
! GTTTTCAGAGATCATTCACG+TGG - chr1_3:4140212-4140231 None:intergenic 40.0%
CAAACAAAAAACACACACGG+AGG + chr1_3:4140240-4140259 Msa0098200:intron 40.0%
AACAACACCACACAACTTCA+TGG - chr1_3:4140461-4140480 None:intergenic 40.0%
!! ATGAAAAGAAGCACCTGCAA+GGG - chr1_3:4140533-4140552 None:intergenic 40.0%
! GGTTCAAGTTCAATTCCACT+CGG + chr1_3:4140788-4140807 Msa0098200:intron 40.0%
! TCCACTTGGTTGTGTCTTTT+AGG + chr1_3:4141313-4141332 Msa0098200:intron 40.0%
TCCTAAAAGACACAACCAAG+TGG - chr1_3:4141317-4141336 None:intergenic 40.0%
! ACTTGGTTGTGTCTTTTAGG+AGG + chr1_3:4141316-4141335 Msa0098200:intron 40.0%
! CACACGCAAATTTTTGTCCT+TGG + chr1_3:4141404-4141423 Msa0098200:intron 40.0%
AGATTACTAGAAGTGGGACT+TGG - chr1_3:4141516-4141535 None:intergenic 40.0%
!! GAAAAAGTTGATGCCGAAAC+TGG + chr1_3:4141935-4141954 Msa0098200:intron 40.0%
TTTCTGCAACTTGCCAGTTT+CGG - chr1_3:4141951-4141970 None:intergenic 40.0%
TTGATTTCAAAAGGGATGGG+GGG - chr1_3:4141983-4142002 None:intergenic 40.0%
CTTGATTTCAAAAGGGATGG+GGG - chr1_3:4141984-4142003 None:intergenic 40.0%
ATGGCACCAGTTAGAGAAAT+TGG - chr1_3:4142470-4142489 None:intergenic 40.0%
!! ATTTCTCTAACTGGTGCCAT+TGG + chr1_3:4142470-4142489 Msa0098200:CDS 40.0%
TCCATAGAGATGAGATCCAA+TGG - chr1_3:4142489-4142508 None:intergenic 40.0%
TCAAGCAACAACAACACCAT+GGG + chr1_3:4142512-4142531 Msa0098200:CDS 40.0%
!! GTCTTGTTGTTGTTGCATGT+TGG - chr1_3:4142570-4142589 None:intergenic 40.0%
TTTCAGTAGCTGAATTGCTG+TGG - chr1_3:4142595-4142614 None:intergenic 40.0%
GCTACTGAAATCTTGAGACT+CGG + chr1_3:4142605-4142624 Msa0098200:CDS 40.0%
! GATTGCTGTTGTTGCTATTG+TGG - chr1_3:4142790-4142809 None:intergenic 40.0%
! TTCAGCAATGTTTTCTCCCA+AGG + chr1_3:4142947-4142966 Msa0098200:CDS 40.0%
TCTTCAGAAAGCTGCTCAAA+TGG + chr1_3:4143030-4143049 Msa0098200:CDS 40.0%
CTTCAGAAAGCTGCTCAAAT+GGG + chr1_3:4143031-4143050 Msa0098200:CDS 40.0%
ATGGGTGCAACTTCAAGTAA+TGG + chr1_3:4143049-4143068 Msa0098200:CDS 40.0%
! TCATGAACAGAGTAACTTGC+AGG + chr1_3:4143213-4143232 Msa0098200:CDS 40.0%
! ATGAACTCTTTTGCTGCTAC+AGG + chr1_3:4143241-4143260 Msa0098200:CDS 40.0%
! CAGCTAACTCGTGACTTTTT+AGG + chr1_3:4143346-4143365 Msa0098200:CDS 40.0%
!! ACTCGTGACTTTTTAGGAGT+TGG + chr1_3:4143352-4143371 Msa0098200:CDS 40.0%
AATTTGGCAGCTTCTTTGGA+AGG + chr1_3:4143451-4143470 Msa0098200:CDS 40.0%
AATGCTGCACAATCATTTGG+AGG + chr1_3:4143493-4143512 Msa0098200:CDS 40.0%
! TGACGTACGTACCTTTTAGT+AGG - chr1_3:4143578-4143597 None:intergenic 40.0%
! TGTGAATAGGAATTTAGGGC+AGG + chr1_3:4143818-4143837 Msa0098200:intron 40.0%
TGTAAATGCCTTTCAACGGT+AGG - chr1_3:4144404-4144423 None:intergenic 40.0%
!! ACCGTTGAAAGGCATTTACA+AGG + chr1_3:4144404-4144423 Msa0098200:intron 40.0%
! GTGACAAAAAAGTGTGTGTG+TGG + chr1_3:4144757-4144776 Msa0098200:intron 40.0%
!!! ATATTTTTGGTTGGCTGGCA+AGG + chr1_3:4144883-4144902 Msa0098200:intron 40.0%
TGTGTGACAAATGTATGAGG+TGG - chr1_3:4144982-4145001 None:intergenic 40.0%
GAATGTATCATGCACGTATC+TGG + chr1_3:4145292-4145311 Msa0098200:intron 40.0%
TGTTCCTTTCTCCACTACTT+AGG + chr1_3:4145328-4145347 Msa0098200:intron 40.0%
! TAGACCTAAGTAGTGGAGAA+AGG - chr1_3:4145335-4145354 None:intergenic 40.0%
!!! TTTATTTTTTTGGGGGAGGG+GGG - chr1_3:4145710-4145729 None:intergenic 40.0%
ACTATCTCCCAAGACCCTAA+TGG + chr1_3:4139347-4139366 Msa0098200:CDS 45.0%
! GTTTGTTGCCATTAGGGTCT+TGG - chr1_3:4139358-4139377 None:intergenic 45.0%
AGACCCTAATGGCAACAAAC+AGG + chr1_3:4139358-4139377 Msa0098200:CDS 45.0%
! GCTGTAGGTTTTGCTCTCTT+TGG - chr1_3:4139413-4139432 None:intergenic 45.0%
AACCTACAGCTTCACAGAAG+AGG + chr1_3:4139423-4139442 Msa0098200:CDS 45.0%
GTCTTCTGCTTAAGCTTCCA+AGG - chr1_3:4139459-4139478 None:intergenic 45.0%
CGTTCATCATGACCCTTCAA+GGG + chr1_3:4139527-4139546 Msa0098200:CDS 45.0%
CTTGTGGCACCAGAGAATAT+AGG + chr1_3:4139673-4139692 Msa0098200:CDS 45.0%
TACGGTGTGGGCAAATGAAA+TGG + chr1_3:4140172-4140191 Msa0098200:intron 45.0%
GTGTGGGCAAATGAAATGGA+TGG + chr1_3:4140176-4140195 Msa0098200:intron 45.0%
CAAAAAACACACACGGAGGA+AGG + chr1_3:4140244-4140263 Msa0098200:intron 45.0%
AAGGAGAGAGAAAGAGAGAG+AGG - chr1_3:4140316-4140335 None:intergenic 45.0%
TGGCATAGCAACACGTGAAT+AGG - chr1_3:4140441-4140460 None:intergenic 45.0%
TGCTATGCCATGAAGTTGTG+TGG + chr1_3:4140451-4140470 Msa0098200:intron 45.0%
!! CATGAAAAGAAGCACCTGCA+AGG - chr1_3:4140534-4140553 None:intergenic 45.0%
CTTGACATTGCAGTTCTTCG+TGG + chr1_3:4141236-4141255 Msa0098200:intron 45.0%
TTGAGCCAATGCATCACAGA+AGG - chr1_3:4142429-4142448 None:intergenic 45.0%
!! TGTGATGCATTGGCTCAAGA+GGG + chr1_3:4142431-4142450 Msa0098200:CDS 45.0%
! AGAGAAATTGGTGGCTGTCT+TGG - chr1_3:4142458-4142477 None:intergenic 45.0%
CAGCCACCAATTTCTCTAAC+TGG + chr1_3:4142461-4142480 Msa0098200:CDS 45.0%
GCACCAGTTAGAGAAATTGG+TGG - chr1_3:4142467-4142486 None:intergenic 45.0%
GCCATTGGATCTCATCTCTA+TGG + chr1_3:4142485-4142504 Msa0098200:CDS 45.0%
CTCAAGCAACAACAACACCA+TGG + chr1_3:4142511-4142530 Msa0098200:CDS 45.0%
TTAGGTCTGAAAGTAGCCTG+GGG - chr1_3:4142677-4142696 None:intergenic 45.0%
GTTAGGTCTGAAAGTAGCCT+GGG - chr1_3:4142678-4142697 None:intergenic 45.0%
TGTTGTTGGGAAGGATCATG+AGG - chr1_3:4142746-4142765 None:intergenic 45.0%
CATGATCCTTCCCAACAACA+AGG + chr1_3:4142746-4142765 Msa0098200:CDS 45.0%
! AGCAATGTTTTCTCCCAAGG+AGG + chr1_3:4142950-4142969 Msa0098200:CDS 45.0%
!! GCTTTTGAGAAGAGAAGTCG+CGG - chr1_3:4143086-4143105 None:intergenic 45.0%
GCAAGTAACTCAGCATCTTC+TGG + chr1_3:4143124-4143143 Msa0098200:CDS 45.0%
AGTAACTCAGCATCTTCTGG+TGG + chr1_3:4143127-4143146 Msa0098200:CDS 45.0%
TGATCCTAGCAGAGTGCAAA+TGG + chr1_3:4143153-4143172 Msa0098200:CDS 45.0%
GATCCTAGCAGAGTGCAAAT+GGG + chr1_3:4143154-4143173 Msa0098200:CDS 45.0%
! GGAAGTGGGAACTATGGTTT+TGG + chr1_3:4143181-4143200 Msa0098200:CDS 45.0%
!!! AGTGGGAACTATGGTTTTGG+TGG + chr1_3:4143184-4143203 Msa0098200:CDS 45.0%
!!! GGAACTATGGTTTTGGTGGT+GGG + chr1_3:4143188-4143207 Msa0098200:CDS 45.0%
TTTGATCAAAGTGGAGGAGG+AGG + chr1_3:4143277-4143296 Msa0098200:CDS 45.0%
! GAGATTGTGAGAAGCATGAG+TGG + chr1_3:4143379-4143398 Msa0098200:CDS 45.0%
!! AGAAGCATGAGTGGTGTTGT+TGG + chr1_3:4143388-4143407 Msa0098200:CDS 45.0%
CAATCATTTGGAGGAGGAAG+AGG + chr1_3:4143502-4143521 Msa0098200:CDS 45.0%
ATTCATTGTGTACGCCTGTG+TGG - chr1_3:4143862-4143881 None:intergenic 45.0%
GTCTGACAAGTTGTCTTGCA+TGG + chr1_3:4144779-4144798 Msa0098200:intron 45.0%
AGAGCACAGTGATGCATATG+TGG + chr1_3:4145643-4145662 Msa0098200:three_prime_UTR 45.0%
GAGCACAGTGATGCATATGT+GGG + chr1_3:4145644-4145663 Msa0098200:three_prime_UTR 45.0%
!!! AAAATTTTATTTTACTTTTT+AGG - chr1_3:4142038-4142057 None:intergenic 5.0%
!!! AATTTTATTTTATTTTTTTG+GGG - chr1_3:4145718-4145737 None:intergenic 5.0%
!!! GAATTTTATTTTATTTTTTT+GGG - chr1_3:4145719-4145738 None:intergenic 5.0%
!!! AGAATTTTATTTTATTTTTT+TGG - chr1_3:4145720-4145739 None:intergenic 5.0%
GGAAACAGATCCAGATGCAG+AGG + chr1_3:4139317-4139336 Msa0098200:CDS 50.0%
AGTGCTATCACCTCTGCATC+TGG - chr1_3:4139330-4139349 None:intergenic 50.0%
GTCCTCTTCTGTGAAGCTGT+AGG - chr1_3:4139428-4139447 None:intergenic 50.0%
GAAGAGGACACAACTTGCCT+TGG + chr1_3:4139439-4139458 Msa0098200:CDS 50.0%
GGGTCATGATGAACGCATGT+GGG - chr1_3:4139522-4139541 None:intergenic 50.0%
AGGGTCATGATGAACGCATG+TGG - chr1_3:4139523-4139542 None:intergenic 50.0%
GCGTTCATCATGACCCTTCA+AGG + chr1_3:4139526-4139545 Msa0098200:CDS 50.0%
TCAGAGATCATTCACGTGGG+TGG - chr1_3:4140208-4140227 None:intergenic 50.0%
CAGAGCCTTCTGTGATGCAT+TGG + chr1_3:4142421-4142440 Msa0098200:CDS 50.0%
!! CTGTGATGCATTGGCTCAAG+AGG + chr1_3:4142430-4142449 Msa0098200:CDS 50.0%
CAGTAGCTGAATTGCTGTGG+TGG - chr1_3:4142592-4142611 None:intergenic 50.0%
TAGGTCTGAAAGTAGCCTGG+GGG - chr1_3:4142676-4142695 None:intergenic 50.0%
CGTTAGGTCTGAAAGTAGCC+TGG - chr1_3:4142679-4142698 None:intergenic 50.0%
AACTCAGCATCTTCTGGTGG+CGG + chr1_3:4143130-4143149 Msa0098200:CDS 50.0%
!! TGCAAATGGGTGGTGGAAGT+GGG + chr1_3:4143167-4143186 Msa0098200:CDS 50.0%
!!! GGGAACTATGGTTTTGGTGG+TGG + chr1_3:4143187-4143206 Msa0098200:CDS 50.0%
!! AGCATGAGTGGTGTTGTTGG+AGG + chr1_3:4143391-4143410 Msa0098200:CDS 50.0%
!! ATGAGTGGTGTTGTTGGAGG+AGG + chr1_3:4143394-4143413 Msa0098200:CDS 50.0%
GCTGCACAATCATTTGGAGG+AGG + chr1_3:4143496-4143515 Msa0098200:CDS 50.0%
TCATTTGGAGGAGGAAGAGG+AGG + chr1_3:4143505-4143524 Msa0098200:CDS 50.0%
TGATGAACGCATGTGGGCTC+AGG - chr1_3:4139516-4139535 None:intergenic 55.0%
!! CATGACCCTTCAAGGGCACT+TGG + chr1_3:4139534-4139553 Msa0098200:CDS 55.0%
GGTCACCAAGTGCCCTTGAA+GGG - chr1_3:4139542-4139561 None:intergenic 55.0%
AGGTCACCAAGTGCCCTTGA+AGG - chr1_3:4139543-4139562 None:intergenic 55.0%
ACTGTGGCACTCTCTTCTCC+AGG + chr1_3:4139700-4139719 Msa0098200:CDS 55.0%
TCAGTACACTGTGCCCTTGC+AGG + chr1_3:4140517-4140536 Msa0098200:intron 55.0%
CTGGGCTATGCTTAGACCCA+TGG - chr1_3:4142531-4142550 None:intergenic 55.0%
CATGGGTCTAAGCATAGCCC+AGG + chr1_3:4142529-4142548 Msa0098200:CDS 55.0%
GGGCATTTGTGCAGCTACCT+GGG - chr1_3:4142549-4142568 None:intergenic 55.0%
TGGGCATTTGTGCAGCTACC+TGG - chr1_3:4142550-4142569 None:intergenic 55.0%
CATGTGGTGGTCGAATTGCC+CGG - chr1_3:4142651-4142670 None:intergenic 55.0%
CCACCCATTTGCACTCTGCT+AGG - chr1_3:4143160-4143179 None:intergenic 55.0%
CCTAGCAGAGTGCAAATGGG+TGG + chr1_3:4143157-4143176 Msa0098200:CDS 55.0%
AGCAGAGTGCAAATGGGTGG+TGG + chr1_3:4143160-4143179 Msa0098200:CDS 55.0%
!! GTGCAAATGGGTGGTGGAAG+TGG + chr1_3:4143166-4143185 Msa0098200:CDS 55.0%
!! GGTGGTGGAAGTGGGAACTA+TGG + chr1_3:4143175-4143194 Msa0098200:CDS 55.0%
GATCAAAGTGGAGGAGGAGG+AGG + chr1_3:4143280-4143299 Msa0098200:CDS 55.0%
!! AGTGGTGTTGTTGGAGGAGG+AGG + chr1_3:4143397-4143416 Msa0098200:CDS 55.0%
TTGGAGGAGGAGGAGGACAA+AGG + chr1_3:4143407-4143426 Msa0098200:CDS 55.0%
TGGAGGAGGAGGAGGACAAA+GGG + chr1_3:4143408-4143427 Msa0098200:CDS 55.0%
! AGGGCACTTGGTGACCTCAC+TGG + chr1_3:4139546-4139565 Msa0098200:CDS 60.0%
! GGGCACTTGGTGACCTCACT+GGG + chr1_3:4139547-4139566 Msa0098200:CDS 60.0%
GAATTGCCCGGTCCGATTGG+CGG - chr1_3:4142639-4142658 None:intergenic 60.0%
GTCGAATTGCCCGGTCCGAT+TGG - chr1_3:4142642-4142661 None:intergenic 60.0%
! AAGTAGCCTGGGGGAGCATG+TGG - chr1_3:4142667-4142686 None:intergenic 60.0%
CAAAGTGGAGGAGGAGGAGG+AGG + chr1_3:4143283-4143302 Msa0098200:CDS 60.0%
!! GGTGTTGTTGGAGGAGGAGG+AGG + chr1_3:4143400-4143419 Msa0098200:CDS 60.0%
! TAGCCTGGGGGAGCATGTGG+TGG - chr1_3:4142664-4142683 None:intergenic 65.0%
AGTGGAGGAGGAGGAGGAGG+AGG + chr1_3:4143286-4143305 Msa0098200:CDS 65.0%
GTGGAGGAGGAGGAGGAGGA+GGG + chr1_3:4143287-4143306 Msa0098200:CDS 65.0%
TGGAGGAGGAGGAGGAGGAG+GGG + chr1_3:4143288-4143307 Msa0098200:CDS 65.0%
! GGAGGAGGAAGAGGAGGTGC+TGG + chr1_3:4143511-4143530 Msa0098200:CDS 65.0%
!! GGAGGAAGAGGAGGTGCTGG+TGG + chr1_3:4143514-4143533 Msa0098200:CDS 65.0%
!! GGAAGAGGAGGTGCTGGTGG+TGG + chr1_3:4143517-4143536 Msa0098200:CDS 65.0%
!! AGAGGAGGTGCTGGTGGTGG+TGG + chr1_3:4143520-4143539 Msa0098200:CDS 65.0%
TTTGGGGGAGGGGGGTTCGA+CGG - chr1_3:4145702-4145721 None:intergenic 65.0%
TTGCCCGGTCCGATTGGCGG+CGG - chr1_3:4142636-4142655 None:intergenic 70.0%
CGACCACCACATGCTCCCCC+AGG + chr1_3:4142658-4142677 Msa0098200:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+GGG + chr1_3:4143289-4143308 Msa0098200:CDS 70.0%
!! GGTGCTGGTGGTGGTGGAGC+AGG + chr1_3:4143526-4143545 Msa0098200:CDS 70.0%
!! GCTGGTGGTGGTGGAGCAGG+AGG + chr1_3:4143529-4143548 Msa0098200:CDS 70.0%
TCGGCGCAGCCGCCGCCAAT+CGG + chr1_3:4142624-4142643 Msa0098200:CDS 75.0%
GCAGCCGCCGCCAATCGGAC+CGG + chr1_3:4142629-4142648 Msa0098200:CDS 75.0%
CAGCCGCCGCCAATCGGACC+GGG + chr1_3:4142630-4142649 Msa0098200:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 4139315 4145873 4139315 ID=Msa0098200;Name=Msa0098200
chr1_3 mRNA 4139315 4145873 4139315 ID=Msa0098200-mRNA-1;Parent=Msa0098200;Name=Msa0098200-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.66|1|0.5|0.33|3|299|523
chr1_3 exon 4139315 4139721 4139315 ID=Msa0098200-mRNA-1:exon:1329;Parent=Msa0098200-mRNA-1
chr1_3 exon 4142400 4143585 4142400 ID=Msa0098200-mRNA-1:exon:1330;Parent=Msa0098200-mRNA-1
chr1_3 exon 4145596 4145873 4145596 ID=Msa0098200-mRNA-1:exon:1331;Parent=Msa0098200-mRNA-1
chr1_3 CDS 4139315 4139721 4139315 ID=Msa0098200-mRNA-1:cds;Parent=Msa0098200-mRNA-1
chr1_3 CDS 4142400 4143564 4142400 ID=Msa0098200-mRNA-1:cds;Parent=Msa0098200-mRNA-1
chr1_3 three_prime_UTR 4143565 4143585 4143565 ID=Msa0098200-mRNA-1:three_prime_utr;Parent=Msa0098200-mRNA-1
chr1_3 three_prime_UTR 4145596 4145873 4145596 ID=Msa0098200-mRNA-1:three_prime_utr;Parent=Msa0098200-mRNA-1
Gene Sequence

>Msa0098200

ATGGAAACAGATCCAGATGCAGAGGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTTATTTGTGAGGTATGCAACAAAGGGTTCCAAAGAGAGCAAAACCTACAGCTTCACAGAAGAGGACACAACTTGCCTTGGAAGCTTAAGCAGAAGACTACAAAAGAGCCTAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGCGTTCATCATGACCCTTCAAGGGCACTTGGTGACCTCACTGGGATTAAGAAACACTACTCTCGCAAACATGGTGAGAAGAAATGGAAGTGTGATAAGTGCTCTAAGAAGTATGCTGTTCAATCTGATTGGAAGGCACATTCTAAGACTTGTGGCACCAGAGAATATAGGTGTGACTGTGGCACTCTCTTCTCCAGGAGAGACAGTTTCATAACTCACAGAGCCTTCTGTGATGCATTGGCTCAAGAGGGTCCAAGACAGCCACCAATTTCTCTAACTGGTGCCATTGGATCTCATCTCTATGGAAGCTCAAGCAACAACAACACCATGGGTCTAAGCATAGCCCAGGTAGCTGCACAAATGCCCAACATGCAACAACAACAAGACCACCACAGCAATTCAGCTACTGAAATCTTGAGACTCGGCGCAGCCGCCGCCAATCGGACCGGGCAATTCGACCACCACATGCTCCCCCAGGCTACTTTCAGACCTAACGCCTTCTTCAACAATAACATTCATGAGCCAAACCAAAACTTTGTTCCTCATGATCCTTCCCAACAACAAGGTTTAATGATGCAGAATAGCCACAATAGCAACAACAGCAATCTCTTCAACATTCCGAATTTCCTTTCAAGTAACAGTACTAACAGTAGCAACAACTCATTCTCTGAACACTTGAATGTGAATAATGAAGGAACAAATTTCTTCAATGGATCAGCTGGAACAAGTAGTGCTCCATCACTCTTCAGCAATGTTTTCTCCCAAGGAGGAAACAGTAACATTAATGCTGCTGGTACTGCTATATCATCAATGTCAGCAACTGCACTTCTTCAGAAAGCTGCTCAAATGGGTGCAACTTCAAGTAATGGAAATGGCACTACCGCGACTTCTCTTCTCAAAAGCTTTGGAAACAATACTGGTGCAAGTAACTCAGCATCTTCTGGTGGCGGTGATCCTAGCAGAGTGCAAATGGGTGGTGGAAGTGGGAACTATGGTTTTGGTGGTGGGAATCATGAACAGAGTAACTTGCAGGATTTGATGAACTCTTTTGCTGCTACAGGAAATACTTCAATATTTGATCAAAGTGGAGGAGGAGGAGGAGGAGGGGGTGTAGGGCTTGGAAGAGGAGGTGGTGATAGCAGTCAGCTAACTCGTGACTTTTTAGGAGTTGGTCATGAGATTGTGAGAAGCATGAGTGGTGTTGTTGGAGGAGGAGGAGGACAAAGGGATCAACATGCAGCTGCTTTTAATTTGGCAGCTTCTTTGGAAGGAGATCAGAGAAACAATATCAATGCTGCACAATCATTTGGAGGAGGAAGAGGAGGTGCTGGTGGTGGTGGAGCAGGAGGAAATTTTCATTGA
Protein sequence

>Msa0098200

METDPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQEGPRQPPISLTGAIGSHLYGSSSNNNTMGLSIAQVAAQMPNMQQQQDHHSNSATEILRLGAAAANRTGQFDHHMLPQATFRPNAFFNNNIHEPNQNFVPHDPSQQQGLMMQNSHNSNNSNLFNIPNFLSSNSTNSSNNSFSEHLNVNNEGTNFFNGSAGTSSAPSLFSNVFSQGGNSNINAAGTAISSMSATALLQKAAQMGATSSNGNGTTATSLLKSFGNNTGASNSASSGGGDPSRVQMGGGSGNYGFGGGNHEQSNLQDLMNSFAATGNTSIFDQSGGGGGGGGVGLGRGGGDSSQLTRDFLGVGHEIVRSMSGVVGGGGGQRDQHAAAFNLAASLEGDQRNNINAAQSFGGGRGGAGGGGAGGNFH*