AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0044920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044920 MtrunA17_Chr1g0211661 87.227 869 69 4 1 827 1 869 0.0 1448
Msa0044920 MtrunA17_Chr1g0211711 73.684 589 141 5 246 823 406 991 0.0 897
Msa0044920 MtrunA17_Chr1g0211711 50.000 162 59 5 42 194 7 155 3.46e-25 113
Msa0044920 MtrunA17_Chr1g0211711 74.603 63 16 0 919 981 990 1052 6.64e-22 102
Msa0044920 MtrunA17_Chr1g0183311 68.730 614 154 4 248 823 209 822 0.0 878
Msa0044920 MtrunA17_Chr1g0183311 75.410 61 15 0 921 981 823 883 1.43e-21 101
Msa0044920 MtrunA17_Chr5g0448301 61.196 719 183 10 79 793 5 631 0.0 806
Msa0044920 MtrunA17_Chr5g0448301 53.293 167 53 6 40 200 2 149 7.01e-30 126
Msa0044920 MtrunA17_Chr5g0426961 68.870 575 171 2 250 823 208 775 0.0 805
Msa0044920 MtrunA17_Chr5g0426961 76.562 64 15 0 919 982 774 837 1.30e-22 104
Msa0044920 MtrunA17_Chr1g0211691 69.871 541 146 7 247 771 406 945 0.0 751
Msa0044920 MtrunA17_Chr1g0211691 63.131 198 65 2 1 194 1 194 4.53e-58 216
Msa0044920 MtrunA17_Chr5g0420361 60.960 625 206 9 229 823 122 738 0.0 748
Msa0044920 MtrunA17_Chr5g0420361 73.171 41 11 0 921 961 739 779 1.43e-11 68.9
Msa0044920 MtrunA17_Chr6g0472441 58.537 615 192 11 242 823 76 660 0.0 702
Msa0044920 MtrunA17_Chr6g0472441 64.151 53 16 1 921 973 661 710 1.27e-11 68.9
Msa0044920 MtrunA17_Chr2g0289121 45.455 572 269 9 258 823 228 762 2.81e-148 462
Msa0044920 MtrunA17_Chr2g0289121 59.649 57 23 0 921 977 763 819 1.55e-12 72.0
Msa0044920 MtrunA17_Chr4g0075261 42.927 615 265 15 253 823 235 807 8.00e-146 457
Msa0044920 MtrunA17_Chr4g0075261 56.140 57 25 0 921 977 808 864 2.58e-12 71.2
Msa0044920 MtrunA17_Chr7g0275771 46.970 462 227 7 265 711 218 676 2.05e-122 397
Msa0044920 MtrunA17_Chr7g0275771 65.591 93 32 0 729 821 773 865 4.32e-33 138
Msa0044920 MtrunA17_Chr7g0275771 50.725 69 34 0 921 989 868 936 1.16e-13 75.9
Msa0044920 MtrunA17_Chr2g0289031 52.819 337 149 3 489 823 8 336 3.73e-108 342
Msa0044920 MtrunA17_Chr2g0289031 56.140 57 25 0 921 977 337 393 1.05e-11 68.2
Msa0044920 MtrunA17_Chr1g0192011 33.715 611 320 10 258 826 339 906 1.08e-107 359
Msa0044920 MtrunA17_Chr1g0147021 45.880 449 205 9 265 707 950 1366 7.62e-105 360
Msa0044920 MtrunA17_Chr1g0147021 69.318 88 27 0 736 823 1551 1638 4.04e-33 139
Msa0044920 MtrunA17_Chr1g0147021 68.085 47 15 0 922 968 1640 1686 1.97e-12 72.0
Msa0044920 MtrunA17_Chr2g0281051 33.868 623 334 14 265 823 289 897 1.87e-91 313
Msa0044920 MtrunA17_Chr4g0048531 35.657 502 231 13 405 823 727 1219 1.22e-78 281
Msa0044920 MtrunA17_Chr4g0048531 30.303 132 89 1 220 348 302 433 1.11e-14 79.3
Msa0044920 MtrunA17_Chr8g0364421 51.953 256 92 3 293 548 5 229 1.14e-74 245
Msa0044920 MtrunA17_Chr7g0231061 58.242 182 71 2 550 728 12 191 7.31e-61 206
Msa0044920 MtrunA17_Chr8g0361381 52.973 185 83 2 487 671 28 208 1.12e-55 192
Msa0044920 MtrunA17_Chr2g0289091 55.634 142 62 1 563 704 23 163 2.03e-43 164
Msa0044920 MtrunA17_Chr2g0289091 64.286 98 33 1 728 823 301 398 4.14e-34 136
Msa0044920 MtrunA17_Chr6g0469821 58.219 146 47 3 1 138 1 140 5.68e-39 141
Msa0044920 MtrunA17_Chr8g0361391 62.500 96 35 1 735 830 50 144 2.25e-35 132
Msa0044920 MtrunA17_Chr8g0340381 54.930 142 41 4 584 721 36 158 9.90e-33 125
Msa0044920 MtrunA17_Chr1g0211671 100.000 59 0 0 921 979 17 75 1.89e-32 122
Msa0044920 MtrunA17_Chr2g0289041 37.342 158 92 4 258 414 53 204 8.73e-28 112
Msa0044920 MtrunA17_Chr1g0211701 77.966 59 13 0 921 979 59 117 4.98e-24 99.8
Msa0044920 MtrunA17_Chr1g0211701 81.818 55 10 0 769 823 4 58 5.27e-24 99.8
Msa0044920 MtrunA17_Chr1g0211681 53.261 92 35 2 55 138 1 92 1.39e-17 79.0
Msa0044920 MtrunA17_Chr2g0289101 36.923 130 76 3 312 440 5 129 9.54e-17 79.0
Msa0044920 MtrunA17_Chr1g0210321 44.545 110 41 6 839 931 73 179 2.00e-15 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044920 AT1G11950.1 49.378 563 259 10 264 823 272 811 9.50e-169 518
Msa0044920 AT1G11950.1 54.386 57 26 0 921 977 812 868 1.14e-12 72.8
Msa0044920 AT1G11950.3 49.378 563 259 10 264 823 272 811 9.50e-169 518
Msa0044920 AT1G11950.3 54.386 57 26 0 921 977 812 868 1.14e-12 72.8
Msa0044920 AT1G62310.1 48.789 578 276 9 251 823 275 837 9.14e-167 513
Msa0044920 AT1G11950.2 48.644 553 258 10 264 813 272 801 5.75e-162 498
Msa0044920 AT3G07610.1 56.744 430 175 4 395 823 415 834 2.61e-153 482
Msa0044920 AT3G07610.1 46.552 116 62 0 254 369 225 340 6.00e-26 116
Msa0044920 AT3G07610.3 54.120 449 179 5 395 823 415 856 1.65e-145 462
Msa0044920 AT3G07610.3 46.552 116 62 0 254 369 225 340 5.92e-26 116
Msa0044920 AT4G00990.3 45.415 458 225 7 248 699 143 581 1.70e-117 380
Msa0044920 AT4G00990.3 65.517 87 30 0 735 821 684 770 5.34e-30 128
Msa0044920 AT4G00990.2 45.415 458 225 7 248 699 143 581 1.73e-117 380
Msa0044920 AT4G00990.2 65.517 87 30 0 735 821 684 770 5.38e-30 128
Msa0044920 AT4G00990.1 45.415 458 225 7 248 699 143 581 5.89e-117 380
Msa0044920 AT4G00990.1 65.517 87 30 0 735 821 684 770 5.39e-30 128
Msa0044920 AT4G00990.1 56.140 57 25 0 921 977 773 829 1.18e-12 72.8
Msa0044920 AT3G07610.2 57.244 283 114 2 395 677 415 690 1.21e-94 318
Msa0044920 AT3G07610.2 46.552 116 62 0 254 369 225 340 1.22e-25 114
Msa0044920 AT1G09060.4 30.897 602 343 11 258 828 293 852 2.37e-79 279
Msa0044920 AT1G09060.3 30.897 602 343 11 258 828 293 852 2.37e-79 279
Msa0044920 AT1G09060.2 30.897 602 343 11 258 828 279 838 3.27e-79 279
Msa0044920 AT1G09060.1 30.897 602 343 11 258 828 279 838 3.27e-79 279
Msa0044920 AT4G21430.1 34.218 377 209 5 480 823 485 855 6.46e-62 228
Msa0044920 AT3G24230.1 35.366 164 75 7 808 940 67 230 1.73e-11 68.2

Find 246 sgRNAs with CRISPR-Local

Find 762 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAGATATTCTTTCAATT+TGG 0.093161 1_1:-76576959 None:intergenic
GCCGATTCTACCTGCTTTAA+AGG 0.132025 1_1:-76577018 None:intergenic
GCCTCCTTCTGATTTATTTC+AGG 0.172247 1_1:+76576007 Msa0044920:CDS
GTTACATCTCATATCAAATT+TGG 0.177557 1_1:+76583034 Msa0044920:CDS
AAATCATACTCAAGCTTAAT+TGG 0.220679 1_1:-76573892 None:intergenic
ATCCAAAACTACATCGTATT+TGG 0.227892 1_1:-76574457 None:intergenic
GGAAATCCGGTTGTGATTAT+TGG 0.228341 1_1:+76578182 Msa0044920:CDS
AGCTCCCAAAATGGCGAAAA+TGG 0.240614 1_1:+76582917 Msa0044920:intron
CGGTTCATTGTCTGAGGAAT+TGG 0.247802 1_1:-76578269 None:intergenic
TCACATTCATTATCAGCTTT+TGG 0.248622 1_1:-76574054 None:intergenic
GGATTTGTGTATTCTTTATA+AGG 0.268369 1_1:-76576071 None:intergenic
GTCGCAGCGATTGGCTTAAA+TGG 0.273010 1_1:+76575958 Msa0044920:CDS
AGTACATTGCTGACAATTAC+AGG 0.278275 1_1:-76574366 None:intergenic
CCAAGAACATATATTGCTTA+TGG 0.280860 1_1:+76576158 Msa0044920:CDS
ATCCCAGAGAGCACCTTCTA+AGG 0.286251 1_1:-76576914 None:intergenic
TGTCATTTCTTTGACATTGA+TGG 0.286327 1_1:-76572937 None:intergenic
CTCCGTGGTGGGAAGCTTCT+AGG 0.287089 1_1:+76573859 Msa0044920:CDS
TCTAGATATTCTTTCAATTT+GGG 0.290597 1_1:-76576958 None:intergenic
CTCCAAATACGATGTAGTTT+TGG 0.304082 1_1:+76574455 Msa0044920:CDS
ACTAACTCAGAGATGCAATT+TGG 0.317312 1_1:-76574111 None:intergenic
CGACAGCGACACCACCGTTT+TGG 0.322177 1_1:-76572455 None:intergenic
TCAGACCATTTATCTGAATA+TGG 0.327236 1_1:+76577484 Msa0044920:CDS
CCATAAGCAATATATGTTCT+TGG 0.328103 1_1:-76576158 None:intergenic
AATGGCGAAAATGGTGATCT+AGG 0.328223 1_1:+76582926 Msa0044920:CDS
CAACCTTGCTGTGAAGTTGC+CGG 0.339593 1_1:+76576109 Msa0044920:CDS
ATGCTCCATATTCAGATAAA+TGG 0.340188 1_1:-76577489 None:intergenic
CTTATTTGCCGTTCCTTGTC+AGG 0.349234 1_1:+76583012 Msa0044920:CDS
TTGTGATGTCAGCGGCGAAT+AGG 0.356503 1_1:-76578348 None:intergenic
AGGGATGCAGAAGCGTTGTT+AGG 0.362991 1_1:+76572622 Msa0044920:CDS
ATGAAACTTAAGAAAGAGTA+TGG 0.363484 1_1:+76577515 Msa0044920:CDS
GAACGTAAGCCATCAGAAAT+TGG 0.378011 1_1:+76578225 Msa0044920:CDS
ATTCGTGAGTGGTCAAGATC+TGG 0.381498 1_1:+76573997 Msa0044920:CDS
ATCCCTTAGAAGGTGCTCTC+TGG 0.383194 1_1:+76576911 Msa0044920:CDS
GTGTACTACAGCTCCCAAAA+TGG 0.386667 1_1:+76582908 Msa0044920:intron
CACGACATGGCTGAGTGTTC+CGG 0.386914 1_1:-76578305 None:intergenic
TGTGATGTCAGCGGCGAATA+GGG 0.394626 1_1:-76578347 None:intergenic
CTAAAGATGAGCGTGTGTTC+TGG 0.394804 1_1:+76573669 Msa0044920:CDS
CTCAAAGCTAAATATAAAAC+CGG 0.396606 1_1:+76573637 Msa0044920:CDS
CTCAACCTCCTCCTCGTTGT+TGG 0.396999 1_1:-76573430 None:intergenic
GTTCTTGCTCGAAACCTGTT+AGG 0.397008 1_1:+76574202 Msa0044920:CDS
TAGAGGAGACTCGTGATAAT+AGG 0.397753 1_1:+76574178 Msa0044920:CDS
TGATCAGGAATGGGTTCATC+TGG 0.401180 1_1:-76572241 None:intergenic
GGTGGCGGTGCTACTTGAAT+TGG 0.404321 1_1:+76578203 Msa0044920:CDS
ATCCTCCAACGGTACCGTTT+CGG 0.404627 1_1:-76572302 None:intergenic
ATATCATCGGTGTACCTAAC+AGG 0.407455 1_1:-76574216 None:intergenic
AGGCAGTTAATTGTTTAGAT+TGG 0.408112 1_1:+76574484 Msa0044920:CDS
TTCAATGGCACTGGAGCAAA+GGG 0.413215 1_1:+76574340 Msa0044920:CDS
TATGTTCTTGGCCCCATGTC+AGG 0.417723 1_1:-76576146 None:intergenic
AATATCCACCAATTCTTCAC+TGG 0.420686 1_1:+76575924 Msa0044920:CDS
GACGATGAAGGTTCGGTTGA+AGG 0.422097 1_1:+76572481 Msa0044920:CDS
CTCGTATTTAACGGGAAATC+CGG 0.427671 1_1:+76578169 Msa0044920:CDS
AGGTTGAGAGAACCACTAAA+AGG 0.429360 1_1:-76576092 None:intergenic
CAGAAATTGAAAAGATGAAG+AGG 0.429960 1_1:+76572602 Msa0044920:CDS
AAGGAACTGCTCGTATTTAA+CGG 0.432547 1_1:+76578160 Msa0044920:CDS
CGAGGTCGCAATTATCTACA+TGG 0.434006 1_1:+76573916 Msa0044920:CDS
AATGTACTTGAATGCACATC+TGG 0.441844 1_1:+76574381 Msa0044920:CDS
TTTGTCTCTCCCGAACATAT+TGG 0.442105 1_1:+76579074 Msa0044920:CDS
AGGCTCTTCATCATTTCAAC+TGG 0.442693 1_1:+76572687 Msa0044920:CDS
TACTACTAGTCTTACAATCA+TGG 0.444577 1_1:-76578443 None:intergenic
GGAATGGGTTCATCTGGATC+AGG 0.444988 1_1:-76572235 None:intergenic
GCAGCGGATCTGTGATTTAT+CGG 0.450090 1_1:-76579134 None:intergenic
AACAGAATAAAGGAAGAAAC+TGG 0.451192 1_1:+76572646 Msa0044920:CDS
GTTGGAGAGGATCCCTTAGA+AGG 0.451802 1_1:+76576901 Msa0044920:CDS
GAAGCACTCACCAATATGTT+CGG 0.452411 1_1:-76579084 None:intergenic
GAACCGACGAATTGCGTCAC+CGG 0.456111 1_1:+76578286 Msa0044920:CDS
TACCGTTTCGGCGCCAACAT+TGG 0.457827 1_1:-76572290 None:intergenic
TTCTTCACTGGGTACACAAA+TGG 0.460684 1_1:+76575936 Msa0044920:CDS
CGCCGAAACGGTACCGTTGG+AGG 0.461207 1_1:+76572300 Msa0044920:CDS
TCTTCCACATTTAAGACGGT+TGG 0.461419 1_1:+76573479 Msa0044920:CDS
GAAGTATCCTTCTCAGTTCA+AGG 0.464781 1_1:-76574086 None:intergenic
AGCACCTTGAGCAAGATAAG+AGG 0.465265 1_1:+76576806 Msa0044920:CDS
TTAATGACACTAATTTCCTC+AGG 0.465562 1_1:-76576769 None:intergenic
GGCCAATGTTGGCGCCGAAA+CGG 0.467500 1_1:+76572288 Msa0044920:CDS
TTACCTTCAGATTTCTGACT+TGG 0.467821 1_1:-76577703 None:intergenic
AATGCACATCTGGTTTAAGC+TGG 0.467845 1_1:+76574391 Msa0044920:CDS
TTGATGCTCTTCTTCTTCGT+CGG 0.470722 1_1:+76582951 Msa0044920:CDS
TCTTTCAATTTCAACACCTC+AGG 0.472947 1_1:-76575981 None:intergenic
GTTTCTCGATGATCATGATC+AGG 0.474522 1_1:-76572256 None:intergenic
ATTTGGAGTTGGTTATTTGA+CGG 0.476343 1_1:-76574440 None:intergenic
AGGAACTGCTCGTATTTAAC+GGG 0.477452 1_1:+76578161 Msa0044920:CDS
TTGTGTACCCAGTGAAGAAT+TGG 0.478196 1_1:-76575932 None:intergenic
TTAAGTTTCTTGTGGACTTG+TGG 0.479397 1_1:-76572769 None:intergenic
GACTTGTAGGAATTGAGCCT+TGG 0.481982 1_1:+76577627 Msa0044920:intron
ATCCGCTGCGGACAAGTTTG+AGG 0.482235 1_1:+76579148 Msa0044920:CDS
ACACAAATGGTCGCAGCGAT+TGG 0.484713 1_1:+76575949 Msa0044920:CDS
AGCTGAAACGTCGTCGTTGA+AGG 0.484777 1_1:+76572354 Msa0044920:CDS
CGATGATCATGATCAGGAAT+GGG 0.491693 1_1:-76572250 None:intergenic
AGGTGATAACATTGCAGCTA+GGG 0.495234 1_1:+76572501 Msa0044920:CDS
TGTTGAAAATAAGTTCTTGT+CGG 0.496312 1_1:-76578378 None:intergenic
TCGATGATCATGATCAGGAA+TGG 0.497827 1_1:-76572251 None:intergenic
TCCCTTAGAAGGTGCTCTCT+GGG 0.498565 1_1:+76576912 Msa0044920:CDS
ATCAAGTGCAACCTTGATGC+AGG 0.498619 1_1:-76579051 None:intergenic
AGAAATTGGTGAATTACAAA+CGG 0.500398 1_1:+76578239 Msa0044920:CDS
GTTGTTAGGGAACAGAATAA+AGG 0.500566 1_1:+76572636 Msa0044920:CDS
CACATCAAGCATAGCATGTA+CGG 0.501504 1_1:-76579779 None:intergenic
ATCAATGTCAAAGAAATGAC+AGG 0.501804 1_1:+76572939 Msa0044920:CDS
GAGACGCGGCAGAAAGAGAA+AGG 0.502047 1_1:+76572717 Msa0044920:CDS
TGCGGAATTCCTCTGTCAAA+CGG 0.503979 1_1:-76579106 None:intergenic
GTCGAAGGACGATGAAGGTT+CGG 0.505191 1_1:+76572474 Msa0044920:CDS
CCGCCACCAATAATCACAAC+CGG 0.505196 1_1:-76578188 None:intergenic
AGGTGTTGAAATTGAAAGAT+TGG 0.508050 1_1:+76575985 Msa0044920:CDS
AGGGATCCTCTCCAACCATC+AGG 0.508501 1_1:-76576894 None:intergenic
AACTACATCGTATTTGGAGT+TGG 0.509194 1_1:-76574451 None:intergenic
GGGATGCAGAAGCGTTGTTA+GGG 0.509891 1_1:+76572623 Msa0044920:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 1_1:+76574339 Msa0044920:CDS
GTTGACTCATATCGCTAAAG+TGG 0.516636 1_1:+76576738 Msa0044920:CDS
ATGATTTGACGTTAGCGCCA+TGG 0.517379 1_1:-76578417 None:intergenic
ACTGGTAAAGATGTGGTAGC+TGG 0.518953 1_1:+76572664 Msa0044920:CDS
ATGGCGAAAATGGTGATCTA+GGG 0.522076 1_1:+76582927 Msa0044920:CDS
TCAGGCTTTACACAATAATC+CGG 0.522487 1_1:-76576128 None:intergenic
CGCAGCAACAGAGGAGACAA+AGG 0.527535 1_1:-76573834 None:intergenic
AAGCACTCACCAATATGTTC+GGG 0.527844 1_1:-76579083 None:intergenic
GCTGATAATGAATGTGATCA+TGG 0.528933 1_1:+76574060 Msa0044920:CDS
TGTAATTCACCAATTTCTGA+TGG 0.529410 1_1:-76578234 None:intergenic
TCTGTTGCAGTCCTGCATCA+AGG 0.530126 1_1:+76579040 Msa0044920:intron
TGAAGAACAAATGATTGAGA+AGG 0.530667 1_1:+76573503 Msa0044920:CDS
AAGAGGGAGCTACATGGTGA+TGG 0.531116 1_1:+76576823 Msa0044920:CDS
GTTGCTGCGAGCTCCGTGGT+GGG 0.531732 1_1:+76573848 Msa0044920:CDS
GATAAATGGTCTGATCATGA+AGG 0.531871 1_1:-76577475 None:intergenic
AGAGGGAGCTACATGGTGAT+GGG 0.532113 1_1:+76576824 Msa0044920:CDS
ATGGTTTCCTTGAACTGAGA+AGG 0.533086 1_1:+76574079 Msa0044920:CDS
GACGTTAGCGCCATGGTCGT+CGG 0.534128 1_1:-76578410 None:intergenic
AATCCGGTTGTGATTATTGG+TGG 0.534903 1_1:+76578185 Msa0044920:CDS
CAAACCAGCAGGAATGAAAA+CGG 0.534926 1_1:-76577675 None:intergenic
GCTACATGGTGATGGGGAGG+CGG 0.535164 1_1:+76576831 Msa0044920:CDS
TGTGTATTCTTTATAAGGCA+AGG 0.535177 1_1:-76576066 None:intergenic
TATGGATTTACTCAAAATCT+CGG 0.535793 1_1:+76576176 Msa0044920:CDS
TATAGGAATACCTCGTCTCC+TGG 0.539286 1_1:-76573535 None:intergenic
TATGCATGTTGGCGCCAAAA+CGG 0.540397 1_1:+76572441 Msa0044920:CDS
AACGGTGGTGTCGCTGTCGA+AGG 0.540573 1_1:+76572459 Msa0044920:CDS
TGTGTTATTGTGTATATCAT+CGG 0.540704 1_1:-76574229 None:intergenic
TTCGTGAGTGGTCAAGATCT+GGG 0.542666 1_1:+76573998 Msa0044920:CDS
CAATTGCATTCCTTTAAAGC+AGG 0.542700 1_1:+76577008 Msa0044920:CDS
TCGGCGCCAACATTGGCCGT+AGG 0.543112 1_1:-76572283 None:intergenic
GCTCCCTCTTATCTTGCTCA+AGG 0.544578 1_1:-76576810 None:intergenic
ACTTGGTGAGGCAAACCAGC+AGG 0.547834 1_1:-76577686 None:intergenic
GCACCTTGAGCAAGATAAGA+GGG 0.549030 1_1:+76576807 Msa0044920:CDS
TTAGATGCACAAAATGCAAA+CGG 0.550175 1_1:+76572972 Msa0044920:CDS
TCCCAGAGAGCACCTTCTAA+GGG 0.550365 1_1:-76576913 None:intergenic
TCATCCAACCGTCTTAAATG+TGG 0.550657 1_1:-76573483 None:intergenic
AACTCAGAGATGCAATTTGG+AGG 0.551495 1_1:-76574108 None:intergenic
TGGTGTAGATCTACAGCCCT+TGG 0.555022 1_1:-76574300 None:intergenic
TCATTGTCTGAGGAATTGGT+TGG 0.558511 1_1:-76578265 None:intergenic
TTGACATTGATGGCACATTG+AGG 0.559359 1_1:-76572927 None:intergenic
GTGGCACAAGCTATCGGTGT+TGG 0.561909 1_1:+76572331 Msa0044920:CDS
TGTTGCTGCGAGCTCCGTGG+TGG 0.562600 1_1:+76573847 Msa0044920:CDS
ATATCCACCAATTCTTCACT+GGG 0.564592 1_1:+76575925 Msa0044920:CDS
TTCTCTAAGTATCTGCTGAA+AGG 0.564863 1_1:+76573453 Msa0044920:CDS
TTCAGATTTCTGACTTGGTG+AGG 0.565040 1_1:-76577698 None:intergenic
GACTTCTTCCACATTTAAGA+CGG 0.566290 1_1:+76573475 Msa0044920:CDS
AGAAATTGAAAAGATGAAGA+GGG 0.567266 1_1:+76572603 Msa0044920:CDS
TGTACCCAGTGAAGAATTGG+TGG 0.567688 1_1:-76575929 None:intergenic
ATTTGAAATTTCAATGGCGG+AGG 0.570807 1_1:+76572156 None:intergenic
AAGGTGATAACATTGCAGCT+AGG 0.571180 1_1:+76572500 Msa0044920:CDS
ACACAACCTACGGCCAATGT+TGG 0.573109 1_1:+76572277 Msa0044920:CDS
TGAAAATAAGTTCTTGTCGG+AGG 0.576918 1_1:-76578375 None:intergenic
CAAGATAAGAGGGAGCTACA+TGG 0.577423 1_1:+76576817 Msa0044920:CDS
ATGCACATCTGGTTTAAGCT+GGG 0.577804 1_1:+76574392 Msa0044920:CDS
CAACTCTCTGACACTAATGA+TGG 0.579184 1_1:+76576868 Msa0044920:CDS
CGCCGCCGCAGCTTTAGCAG+AGG 0.580166 1_1:-76572530 None:intergenic
CACGGAGCTCGCAGCAACAG+AGG 0.580415 1_1:-76573843 None:intergenic
GGAGCTACATGGTGATGGGG+AGG 0.581361 1_1:+76576828 Msa0044920:CDS
ACTATAGGAAATGAAGCGTA+AGG 0.584966 1_1:+76573401 Msa0044920:intron
GGTGACGTGGCACAAGCTAT+CGG 0.585670 1_1:+76572325 Msa0044920:CDS
ATAAATGGTCTGATCATGAA+GGG 0.587122 1_1:-76577474 None:intergenic
CATCATTAGTGTCAGAGAGT+TGG 0.587536 1_1:-76576867 None:intergenic
AATCAAGCTTCAAGATGTAG+AGG 0.589159 1_1:+76574161 Msa0044920:CDS
TATTGTGTAAAGCCTGACAT+GGG 0.589216 1_1:+76576134 Msa0044920:CDS
TGAAACCAACAACGAGGAGG+AGG 0.589775 1_1:+76573425 Msa0044920:CDS
AGTTCCTGAAATAAATCAGA+AGG 0.590173 1_1:-76576011 None:intergenic
AGATGTAACCTGACAAGGAA+CGG 0.590718 1_1:-76583020 None:intergenic
GAATGGGTTCATCTGGATCA+GGG 0.590909 1_1:-76572234 None:intergenic
CACTAATGATGGTGACCTGA+TGG 0.592137 1_1:+76576879 Msa0044920:CDS
TGGACAAGGAATGCTACCAT+CGG 0.593451 1_1:-76574034 None:intergenic
TCGTGATTCATGAACCACTC+TGG 0.593650 1_1:+76578323 Msa0044920:CDS
TGGCGCCGAAACGGTACCGT+TGG 0.594492 1_1:+76572297 Msa0044920:CDS
AATCAGCGAGAGTAATGCTA+AGG 0.594627 1_1:+76572792 Msa0044920:CDS
GTTCCGGTGACGCAATTCGT+CGG 0.595552 1_1:-76578289 None:intergenic
TTGAGAAGGAAAGAGAAGCC+AGG 0.596035 1_1:+76573517 Msa0044920:CDS
GAAAGAGAAGCCAGGAGACG+AGG 0.596795 1_1:+76573525 Msa0044920:CDS
AATGATGGTGACCTGATGGT+TGG 0.598278 1_1:+76576883 Msa0044920:CDS
AACTTCTGAATAAAAGTCCA+AGG 0.598579 1_1:-76577644 None:intergenic
CCGGTTGTGATTATTGGTGG+CGG 0.600774 1_1:+76578188 Msa0044920:CDS
ATTCGTCGGTTCATTGTCTG+AGG 0.606379 1_1:-76578275 None:intergenic
AGAAAGTGTATCACATGCAG+AGG 0.606509 1_1:+76573963 Msa0044920:CDS
CACCTAGAAGCTTCCCACCA+CGG 0.608942 1_1:-76573861 None:intergenic
TCATCGAGAAACACAACCTA+CGG 0.610549 1_1:+76572267 Msa0044920:CDS
GGGTTCATCTGGATCAGGGA+GGG 0.610921 1_1:-76572230 None:intergenic
TGTGATTTATCGGAAGCTTG+CGG 0.611620 1_1:-76579124 None:intergenic
GGAAGAAACTGGTAAAGATG+TGG 0.613492 1_1:+76572657 Msa0044920:CDS
GAAACGGTACCGTTGGAGGA+TGG 0.613747 1_1:+76572304 Msa0044920:CDS
TTATTGTGTAAAGCCTGACA+TGG 0.616770 1_1:+76576133 Msa0044920:CDS
CTCTGTTGCTGCGAGCTCCG+TGG 0.620459 1_1:+76573844 Msa0044920:CDS
TCGCTGTCGAAGGACGATGA+AGG 0.626327 1_1:+76572469 Msa0044920:CDS
TCCTGAAATAAATCAGAAGG+AGG 0.633909 1_1:-76576008 None:intergenic
ATATGAGATGTAACCTGACA+AGG 0.636211 1_1:-76583025 None:intergenic
TATACACAATAACACAAGGA+AGG 0.636388 1_1:+76574236 Msa0044920:CDS
ATCCTCTGCTAAAGCTGCGG+CGG 0.638471 1_1:+76572528 Msa0044920:CDS
TCACCAAGTCAGAAATCTGA+AGG 0.640211 1_1:+76577700 Msa0044920:CDS
AGTTTCAGAACCGACGACCA+TGG 0.642281 1_1:+76578400 Msa0044920:CDS
CGTACATGCTATGCTTGATG+TGG 0.642539 1_1:+76579780 Msa0044920:CDS
AACCTCAAACTTGTCCGCAG+CGG 0.644100 1_1:-76579150 None:intergenic
AATGCACGCCACATGACTAG+TGG 0.646851 1_1:-76574417 None:intergenic
ACCGTTGGAGGATGGTGACG+TGG 0.648574 1_1:+76572312 Msa0044920:CDS
GGTAAAGATGTGGTAGCTGG+AGG 0.648889 1_1:+76572667 Msa0044920:CDS
GAGGTTTATTGTGATGTCAG+CGG 0.649113 1_1:-76578356 None:intergenic
CAAGGAACGGCAAATAAGAG+AGG 0.650805 1_1:-76583007 None:intergenic
TTCATCCTCTGCTAAAGCTG+CGG 0.652304 1_1:+76572525 Msa0044920:CDS
TCATCTTTAGAATAATCCGC+CGG 0.653440 1_1:-76573656 None:intergenic
GAGGGAGCTACATGGTGATG+GGG 0.656552 1_1:+76576825 Msa0044920:CDS
CGTGGTGGGAAGCTTCTAGG+TGG 0.658159 1_1:+76573862 Msa0044920:CDS
TAATTGTTTAGATTGGTGTG+AGG 0.659042 1_1:+76574491 Msa0044920:CDS
TAAATGGTCTGATCATGAAG+GGG 0.660847 1_1:-76577473 None:intergenic
GCGGCGGCGATAATGAAATG+CGG 0.661761 1_1:+76572544 Msa0044920:CDS
AAAGCTAAATATAAAACCGG+CGG 0.661902 1_1:+76573640 Msa0044920:CDS
TGAGTGCTTCCGTTTGACAG+AGG 0.665002 1_1:+76579097 Msa0044920:CDS
GCCACGTCACCATCCTCCAA+CGG 0.665173 1_1:-76572313 None:intergenic
AATCCGGCAACTTCACAGCA+AGG 0.666731 1_1:-76576112 None:intergenic
TAAAGTGGAACTAAAACCTG+AGG 0.669552 1_1:+76576753 Msa0044920:CDS
CGATTGGCTTAAATGGCCTG+AGG 0.670626 1_1:+76575965 Msa0044920:CDS
GGGTGGCATGCAAATGCCGA+TGG 0.671435 1_1:+76574018 Msa0044920:CDS
GCTGGGAACCACTAGTCATG+TGG 0.677762 1_1:+76574409 Msa0044920:CDS
ATGAGTCTACGATTCGTGAG+TGG 0.678627 1_1:+76573986 Msa0044920:CDS
ACGCGGCAGAAAGAGAAAGG+CGG 0.678843 1_1:+76572720 Msa0044920:CDS
TGGGTTCATCTGGATCAGGG+AGG 0.685323 1_1:-76572231 None:intergenic
TCAATGTCAAAGAAATGACA+GGG 0.687101 1_1:+76572940 Msa0044920:CDS
TTTACTCAAAATCTCGGACG+CGG 0.689301 1_1:+76576182 Msa0044920:CDS
ATGAACTCAGCATGATGACG+AGG 0.692646 1_1:-76576038 None:intergenic
ATTGTGTAAAGCCTGACATG+GGG 0.693819 1_1:+76576135 Msa0044920:CDS
GTGGTTCATGAATCACGACA+TGG 0.695942 1_1:-76578318 None:intergenic
CTGCATCAGACACATCACAA+TGG 0.698372 1_1:-76576223 None:intergenic
GGTCGCAATTATCTACATGG+TGG 0.698999 1_1:+76573919 Msa0044920:CDS
GGCTGAAACCAACAACGAGG+AGG 0.705772 1_1:+76573422 Msa0044920:CDS
TGGTGACCTGATGGTTGGAG+AGG 0.707195 1_1:+76576888 Msa0044920:CDS
ATGATATACACAATAACACA+AGG 0.707929 1_1:+76574232 Msa0044920:CDS
GGACGATGAACGTGATGACG+TGG 0.712626 1_1:+76572375 Msa0044920:CDS
AAATGGTCTGATCATGAAGG+GGG 0.713662 1_1:-76577472 None:intergenic
GCATGTTGGCGCCAAAACGG+TGG 0.714446 1_1:+76572444 Msa0044920:CDS
AGGGCTGTAGATCTACACCA+TGG 0.722496 1_1:+76574303 Msa0044920:CDS
GCGGCGAATAGGGTCCAGAG+TGG 0.740679 1_1:-76578337 None:intergenic
CAACTGGTGAGAAAGAGACG+CGG 0.745058 1_1:+76572703 Msa0044920:CDS
GATAAATCACAGATCCGCTG+CGG 0.750646 1_1:+76579136 Msa0044920:CDS
CGATGAACGTGATGACGTGG+TGG 0.763971 1_1:+76572378 Msa0044920:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 1_1:+76574341 Msa0044920:CDS
GTGAGTGGTCAAGATCTGGG+TGG 0.773278 1_1:+76574001 Msa0044920:CDS
TAAGGCTGAAACCAACAACG+AGG 0.802053 1_1:+76573419 Msa0044920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATAATTTATTTATTTT+TGG - chr1_1:76575522-76575541 None:intergenic 0.0%
!!! TTCATTTTATAATTTGATTT+TGG + chr1_1:76573590-76573609 Msa0044920:intron 10.0%
!!! TCATTTTATAATTTGATTTT+GGG + chr1_1:76573591-76573610 Msa0044920:intron 10.0%
!!! AACATATTTATTTTTTTAAC+TGG + chr1_1:76574732-76574751 Msa0044920:intron 10.0%
!! ATAATATTCTAATATTATGT+TGG - chr1_1:76579348-76579367 None:intergenic 10.0%
!!! ATAATCTTTACTTATATTTT+TGG + chr1_1:76581037-76581056 Msa0044920:intron 10.0%
!! TCACAATTGAAATAAAATTA+TGG + chr1_1:76575318-76575337 Msa0044920:intron 15.0%
!! TTATATAAATATGTATATGC+TGG + chr1_1:76575546-76575565 Msa0044920:intron 15.0%
!! AAATAAACAGATAAATGAAA+TGG - chr1_1:76576403-76576422 None:intergenic 15.0%
!!! TTTTTTGTAATTTTGCTATA+AGG + chr1_1:76576708-76576727 Msa0044920:intron 15.0%
!! ACTAAAATTTGTATTACAAT+TGG - chr1_1:76578097-76578116 None:intergenic 15.0%
!!! AGATTGTTTAGTATTTTTTA+TGG + chr1_1:76578824-76578843 Msa0044920:intron 15.0%
!! TACAAAATATATCAAAAAGT+TGG - chr1_1:76578850-76578869 None:intergenic 15.0%
!!! ATATATTTTGTAACTTTACA+AGG + chr1_1:76578858-76578877 Msa0044920:intron 15.0%
!!! TTTTACTTTTCCTATATATA+AGG + chr1_1:76579198-76579217 Msa0044920:intron 15.0%
!! ATGAAAATAACTAAGTAATA+TGG + chr1_1:76579261-76579280 Msa0044920:intron 15.0%
!!! AATATTTTAGTTTATCTCAT+AGG - chr1_1:76579325-76579344 None:intergenic 15.0%
!! AACATTGGATAAAAATAAAA+AGG + chr1_1:76580586-76580605 Msa0044920:intron 15.0%
!! ATTACTTTGTAAACTAATTA+AGG - chr1_1:76581284-76581303 None:intergenic 15.0%
!!! ATATGTAACTAAATCTTTTT+AGG + chr1_1:76581585-76581604 Msa0044920:intron 15.0%
!! TTAGGAATAATTTATTTCAA+AGG + chr1_1:76581707-76581726 Msa0044920:intron 15.0%
!! AATATCCAACATAATAAATA+GGG + chr1_1:76582424-76582443 Msa0044920:intron 15.0%
!! AATAAAATACAAGAGTTAAA+AGG - chr1_1:76582537-76582556 None:intergenic 15.0%
!!! TCAGATTTTATAATTTGAAT+AGG + chr1_1:76582746-76582765 Msa0044920:intron 15.0%
!!! CAGATTTTATAATTTGAATA+GGG + chr1_1:76582747-76582766 Msa0044920:intron 15.0%
!!! TTAATTTTTTTGTCTCATTT+TGG + chr1_1:76582869-76582888 Msa0044920:intron 15.0%
!! TAGATTTCAAATATAGACTA+CGG - chr1_1:76573369-76573388 None:intergenic 20.0%
!!! ATATTTGAAATCTATCCATT+TGG + chr1_1:76573375-76573394 Msa0044920:intron 20.0%
!!! GAGATTTAAAACATTTTCAA+TGG + chr1_1:76574325-76574344 Msa0044920:CDS 20.0%
!!! AATCCAAATTTTAAGAATGT+CGG - chr1_1:76574609-76574628 None:intergenic 20.0%
!! TCATTTATAAACATAGTTTG+AGG + chr1_1:76574678-76574697 Msa0044920:intron 20.0%
!! AATAGATAAATTGAATGAAG+AGG - chr1_1:76575074-76575093 None:intergenic 20.0%
!! TCTTCATTCAATTTATCTAT+TGG + chr1_1:76575073-76575092 Msa0044920:intron 20.0%
!! TTTGACTGTTATTATGTATT+AGG + chr1_1:76575100-76575119 Msa0044920:intron 20.0%
!! TTGACTGTTATTATGTATTA+GGG + chr1_1:76575101-76575120 Msa0044920:intron 20.0%
!!! TATTGTATTAGGTAGTTTTT+AGG + chr1_1:76575451-76575470 Msa0044920:intron 20.0%
!! TATTACCTGCAAATTTAAAT+GGG - chr1_1:76575601-76575620 None:intergenic 20.0%
!!! TCAAAACCTTTTTATATTTC+TGG + chr1_1:76576252-76576271 Msa0044920:intron 20.0%
!!! ATTTGTGTTTTTTTTACGAA+AGG + chr1_1:76576300-76576319 Msa0044920:intron 20.0%
!! TCAAATGAAGAAATTATCTA+TGG - chr1_1:76576488-76576507 None:intergenic 20.0%
!!! ATTTGATTTGTTATTTCTCT+TGG + chr1_1:76576502-76576521 Msa0044920:intron 20.0%
!!! ATAAACTGCAAAGTATTTTT+AGG + chr1_1:76576574-76576593 Msa0044920:intron 20.0%
!! CTCATAATAAAATATTCACT+TGG - chr1_1:76576670-76576689 None:intergenic 20.0%
!!! CAAGTGAATATTTTATTATG+AGG + chr1_1:76576668-76576687 Msa0044920:intron 20.0%
!! TCTAGATATTCTTTCAATTT+GGG - chr1_1:76576961-76576980 None:intergenic 20.0%
!! TGTAAACTTCAAATTTGATA+CGG - chr1_1:76577392-76577411 None:intergenic 20.0%
!!! TATCAAATTTGAAGTTTACA+AGG + chr1_1:76577392-76577411 Msa0044920:intron 20.0%
!!! CTTGTAATCTTGTTTTAATT+GGG - chr1_1:76577776-76577795 None:intergenic 20.0%
!!! TCTTGTAATCTTGTTTTAAT+TGG - chr1_1:76577777-76577796 None:intergenic 20.0%
!! TTGTCCAAAATTTATTTACA+TGG + chr1_1:76578644-76578663 Msa0044920:intron 20.0%
!!! TGTACCATGTAAATAAATTT+TGG - chr1_1:76578651-76578670 None:intergenic 20.0%
!! AATTTACTACCTATTCAATA+GGG - chr1_1:76579240-76579259 None:intergenic 20.0%
!! TTCTTTATAACAAAACAGAA+AGG + chr1_1:76580145-76580164 Msa0044920:intron 20.0%
!! AATATAATTCACCAGAATAT+AGG - chr1_1:76580480-76580499 None:intergenic 20.0%
!! TATATTCTGGTGAATTATAT+TGG + chr1_1:76580479-76580498 Msa0044920:intron 20.0%
!! TAGTTATATCTTTCATTTGA+AGG + chr1_1:76580561-76580580 Msa0044920:intron 20.0%
!!! AATCAAACATGATTTGTTTT+TGG - chr1_1:76580692-76580711 None:intergenic 20.0%
!!! AAACAAATCATGTTTGATTT+AGG + chr1_1:76580693-76580712 Msa0044920:intron 20.0%
!! TTGTAAACTAATTAAGGAAT+TGG - chr1_1:76581278-76581297 None:intergenic 20.0%
!! TAACTCTAGATTATATACTT+AGG + chr1_1:76581734-76581753 Msa0044920:intron 20.0%
!! GAATATCCAACATAATAAAT+AGG + chr1_1:76582423-76582442 Msa0044920:intron 20.0%
!! ATATCCAACATAATAAATAG+GGG + chr1_1:76582425-76582444 Msa0044920:intron 20.0%
! AGAAATTGAAAAGATGAAGA+GGG + chr1_1:76572603-76572622 Msa0044920:CDS 25.0%
! TCTGCTCATTTATATATGTT+TGG + chr1_1:76572835-76572854 Msa0044920:intron 25.0%
! CTGCTCATTTATATATGTTT+GGG + chr1_1:76572836-76572855 Msa0044920:intron 25.0%
!! CATTTATATATGTTTGGGTT+TGG + chr1_1:76572841-76572860 Msa0044920:intron 25.0%
!!! TTAATCAACAGTGTTTTGAA+GGG + chr1_1:76572900-76572919 Msa0044920:intron 25.0%
! ACAAAGTAAAACAGAAGTTA+AGG - chr1_1:76573039-76573058 None:intergenic 25.0%
!!! AATATGCCTTGTTTGATAAT+TGG + chr1_1:76573106-76573125 Msa0044920:intron 25.0%
!!! ATATGCCTTGTTTGATAATT+GGG + chr1_1:76573107-76573126 Msa0044920:intron 25.0%
! TGTAATATGTGCAATAACTT+CGG - chr1_1:76573140-76573159 None:intergenic 25.0%
! TATTGCACATATTACATGTT+TGG + chr1_1:76573144-76573163 Msa0044920:intron 25.0%
!! CATATTACATGTTTGGATTT+TGG + chr1_1:76573151-76573170 Msa0044920:intron 25.0%
! ATATCACTCTCTTTCAATTT+AGG - chr1_1:76573229-76573248 None:intergenic 25.0%
! ATTTCCTATAGTAAACCAAA+TGG - chr1_1:76573393-76573412 None:intergenic 25.0%
! CTCAAAGCTAAATATAAAAC+CGG + chr1_1:76573637-76573656 Msa0044920:CDS 25.0%
! AAATCATACTCAAGCTTAAT+TGG - chr1_1:76573895-76573914 None:intergenic 25.0%
!! TGTGTTATTGTGTATATCAT+CGG - chr1_1:76574232-76574251 None:intergenic 25.0%
! ATGATATACACAATAACACA+AGG + chr1_1:76574232-76574251 Msa0044920:CDS 25.0%
!! ACAAATTTTTATACTGTCCA+AGG + chr1_1:76574283-76574302 Msa0044920:CDS 25.0%
!! CAAATTTTTATACTGTCCAA+GGG + chr1_1:76574284-76574303 Msa0044920:CDS 25.0%
!!! GAAAATGTTTTAAATCTCCA+TGG - chr1_1:76574323-76574342 None:intergenic 25.0%
! TAACCGACATTCTTAAAATT+TGG + chr1_1:76574603-76574622 Msa0044920:intron 25.0%
! TACTGTTGAAATACAACATT+AGG + chr1_1:76574813-76574832 Msa0044920:intron 25.0%
! ACTGTTGAAATACAACATTA+GGG + chr1_1:76574814-76574833 Msa0044920:intron 25.0%
!! TATCTAAATTTCTTGCTATC+TGG + chr1_1:76574996-76575015 Msa0044920:intron 25.0%
! ATGTGATGCAAAAACAAATT+GGG - chr1_1:76575025-76575044 None:intergenic 25.0%
! TATGTGATGCAAAAACAAAT+TGG - chr1_1:76575026-76575045 None:intergenic 25.0%
!!! ACGAGTATTTTTTACAAACA+CGG - chr1_1:76575177-76575196 None:intergenic 25.0%
!!! ACAATTTTTGAAGGATGTTT+TGG - chr1_1:76575410-76575429 None:intergenic 25.0%
!! TGTTGGTATACAATTTTTGA+AGG - chr1_1:76575419-76575438 None:intergenic 25.0%
! AAAAATTGTATACCAACAGA+GGG + chr1_1:76575421-76575440 Msa0044920:intron 25.0%
! GTATTACCTGCAAATTTAAA+TGG - chr1_1:76575602-76575621 None:intergenic 25.0%
! GGATTTGTGTATTCTTTATA+AGG - chr1_1:76576074-76576093 None:intergenic 25.0%
! TATGGATTTACTCAAAATCT+CGG + chr1_1:76576176-76576195 Msa0044920:CDS 25.0%
! AACATGCCAGAAATATAAAA+AGG - chr1_1:76576261-76576280 None:intergenic 25.0%
!! TAAAGAAGTGCATAATTTGT+AGG + chr1_1:76576353-76576372 Msa0044920:intron 25.0%
! CTCTAGATATTCTTTCAATT+TGG - chr1_1:76576962-76576981 None:intergenic 25.0%
! TCCAAAAGTTACAAAAAACA+GGG - chr1_1:76577127-76577146 None:intergenic 25.0%
!!! TGTTTTTTGTAACTTTTGGA+GGG + chr1_1:76577127-76577146 Msa0044920:intron 25.0%
! TGTGTATTTGAATCTTAACT+CGG - chr1_1:76577188-76577207 None:intergenic 25.0%
! AACATAATATAAAGTCTGAC+TGG + chr1_1:76577229-76577248 Msa0044920:intron 25.0%
!!! CTGACTGGTTTATTAATTTA+CGG + chr1_1:76577244-76577263 Msa0044920:intron 25.0%
! ACTGTAATCATAGTAATGAA+AGG - chr1_1:76577271-76577290 None:intergenic 25.0%
! ATTCAAGAAAATAAACAGCA+AGG - chr1_1:76577422-76577441 None:intergenic 25.0%
! ATGAAACTTAAGAAAGAGTA+TGG + chr1_1:76577515-76577534 Msa0044920:CDS 25.0%
!!! GACTAGTTTGATCATTTAAA+TGG + chr1_1:76577578-76577597 Msa0044920:intron 25.0%
! AGAAATTGGTGAATTACAAA+CGG + chr1_1:76578239-76578258 Msa0044920:CDS 25.0%
! TGTTGAAAATAAGTTCTTGT+CGG - chr1_1:76578381-76578400 None:intergenic 25.0%
! ATCTCAAACATTATGAGAAA+AGG + chr1_1:76578467-76578486 Msa0044920:intron 25.0%
! TCTCAAACATTATGAGAAAA+GGG + chr1_1:76578468-76578487 Msa0044920:intron 25.0%
! GTTAAAATGTGGTGATTAAA+TGG + chr1_1:76578557-76578576 Msa0044920:intron 25.0%
!! AACGTCTATAAAATTTTGCT+TGG + chr1_1:76578698-76578717 Msa0044920:intron 25.0%
! TACAAGGCTAAAATTGAATT+TGG + chr1_1:76578874-76578893 Msa0044920:intron 25.0%
!! AGTCTTGTATCCTTATATAT+AGG - chr1_1:76579211-76579230 None:intergenic 25.0%
! GAATTTACTACCTATTCAAT+AGG - chr1_1:76579241-76579260 None:intergenic 25.0%
! TCATGTCAACAATTTCTTAT+TGG + chr1_1:76579543-76579562 Msa0044920:intron 25.0%
! CATGTCAACAATTTCTTATT+GGG + chr1_1:76579544-76579563 Msa0044920:intron 25.0%
!!! TTTATGTACTGTTTTTTTCC+TGG + chr1_1:76579569-76579588 Msa0044920:intron 25.0%
! AAGATTTCATACATTCAACA+AGG - chr1_1:76579635-76579654 None:intergenic 25.0%
! TTGTTGAATGTATGAAATCT+TGG + chr1_1:76579634-76579653 Msa0044920:intron 25.0%
! TCATGTCAACAATTTCTTAT+TGG + chr1_1:76579543-76579562 Msa0044920:intron 25.0%
! CATGTCAACAATTTCTTATT+GGG + chr1_1:76579544-76579563 Msa0044920:intron 25.0%
! TTGAAAAATTAGAGAAAGCA+AGG + chr1_1:76579803-76579822 Msa0044920:CDS 25.0%
! ATGATTGCCATTAAATTTAC+AGG + chr1_1:76580013-76580032 Msa0044920:intron 25.0%
! ATTTATTGAGTCACTTGATT+AGG + chr1_1:76580106-76580125 Msa0044920:intron 25.0%
!!! GTTCCATATTTTGTTTTAAC+CGG + chr1_1:76580167-76580186 Msa0044920:intron 25.0%
! TATGTAGTGAACAAAATATC+AGG + chr1_1:76580516-76580535 Msa0044920:intron 25.0%
! TTTCATTTGAAGGAAAACAT+TGG + chr1_1:76580571-76580590 Msa0044920:intron 25.0%
!! ATTTCATATTCCCAGTTTTT+GGG - chr1_1:76580899-76580918 None:intergenic 25.0%
! TTCAAATGACTAGATAAATG+GGG - chr1_1:76580984-76581003 None:intergenic 25.0%
! CTTCAAATGACTAGATAAAT+GGG - chr1_1:76580985-76581004 None:intergenic 25.0%
! ACTTCAAATGACTAGATAAA+TGG - chr1_1:76580986-76581005 None:intergenic 25.0%
!! TTTTCCAATTACATTCACTT+TGG + chr1_1:76581309-76581328 Msa0044920:intron 25.0%
!!! TATATTCTCCTTGTTTTTCT+AGG + chr1_1:76581520-76581539 Msa0044920:intron 25.0%
! AAACATATCCTAGAAAAACA+AGG - chr1_1:76581531-76581550 None:intergenic 25.0%
!!! GTTCGCTAATAAGTTTTATT+AGG + chr1_1:76581689-76581708 Msa0044920:intron 25.0%
! ATGTAACTAGTTAGTGATTA+AGG + chr1_1:76581948-76581967 Msa0044920:intron 25.0%
!!! ATGTCGCGTTTATTTATTTT+AGG - chr1_1:76582393-76582412 None:intergenic 25.0%
! TATCCAACATAATAAATAGG+GGG + chr1_1:76582426-76582445 Msa0044920:intron 25.0%
! CTACTTATCACTTTATTACT+TGG + chr1_1:76582621-76582640 Msa0044920:intron 25.0%
! TTATTACTTGGTAAACGATT+TGG + chr1_1:76582633-76582652 Msa0044920:intron 25.0%
!!! AATGTTTTAACGTCTTTTTG+TGG - chr1_1:76582726-76582745 None:intergenic 25.0%
! TAAATATGTTACAACTTCGA+GGG + chr1_1:76582819-76582838 Msa0044920:intron 25.0%
! AATAAGAGAGGAAAAAATTG+TGG - chr1_1:76582998-76583017 None:intergenic 25.0%
! GTTACATCTCATATCAAATT+TGG + chr1_1:76583034-76583053 Msa0044920:CDS 25.0%
!!! ATATCTTGTTTTTCTCGATC+AGG - chr1_1:76572424-76572443 None:intergenic 30.0%
GAAAAACAAGATATGCATGT+TGG + chr1_1:76572430-76572449 Msa0044920:CDS 30.0%
CAGAAATTGAAAAGATGAAG+AGG + chr1_1:76572602-76572621 Msa0044920:CDS 30.0%
AACAGAATAAAGGAAGAAAC+TGG + chr1_1:76572646-76572665 Msa0044920:CDS 30.0%
!! CTTAATCAACAGTGTTTTGA+AGG + chr1_1:76572899-76572918 Msa0044920:intron 30.0%
!!! TAATCAACAGTGTTTTGAAG+GGG + chr1_1:76572901-76572920 Msa0044920:intron 30.0%
! TGTCATTTCTTTGACATTGA+TGG - chr1_1:76572940-76572959 None:intergenic 30.0%
ATCAATGTCAAAGAAATGAC+AGG + chr1_1:76572939-76572958 Msa0044920:CDS 30.0%
TCAATGTCAAAGAAATGACA+GGG + chr1_1:76572940-76572959 Msa0044920:CDS 30.0%
TTAGATGCACAAAATGCAAA+CGG + chr1_1:76572972-76572991 Msa0044920:CDS 30.0%
GCACATCATGTATACAAAAT+TGG + chr1_1:76573005-76573024 Msa0044920:intron 30.0%
TACATCCCAATTATCAAACA+AGG - chr1_1:76573115-76573134 None:intergenic 30.0%
!!! TTTTTTGTTGCCTTTTGCTA+AGG + chr1_1:76573200-76573219 Msa0044920:intron 30.0%
! ATTTAGGATACCTTAGCAAA+AGG - chr1_1:76573213-76573232 None:intergenic 30.0%
AAGAATAGTTAATCGTGGAA+GGG - chr1_1:76573337-76573356 None:intergenic 30.0%
ATCAGAAGAATAGTTAATCG+TGG - chr1_1:76573342-76573361 None:intergenic 30.0%
! CTATCCATTTGGTTTACTAT+AGG + chr1_1:76573386-76573405 Msa0044920:intron 30.0%
TGAAGAACAAATGATTGAGA+AGG + chr1_1:76573503-76573522 Msa0044920:CDS 30.0%
! CAAATTTTCTCCGACTATAT+AGG - chr1_1:76573555-76573574 None:intergenic 30.0%
!!! ATTTTGGGATGTGAATTACA+GGG + chr1_1:76573606-76573625 Msa0044920:intron 30.0%
AAAGCTAAATATAAAACCGG+CGG + chr1_1:76573640-76573659 Msa0044920:CDS 30.0%
! TCACATTCATTATCAGCTTT+TGG - chr1_1:76574057-76574076 None:intergenic 30.0%
TATACACAATAACACAAGGA+AGG + chr1_1:76574236-76574255 Msa0044920:CDS 30.0%
! TAAAACATTTTCAATGGCAC+TGG + chr1_1:76574331-76574350 Msa0044920:CDS 30.0%
! ATTTGGAGTTGGTTATTTGA+CGG - chr1_1:76574443-76574462 None:intergenic 30.0%
ATCCAAAACTACATCGTATT+TGG - chr1_1:76574460-76574479 None:intergenic 30.0%
AGGCAGTTAATTGTTTAGAT+TGG + chr1_1:76574484-76574503 Msa0044920:CDS 30.0%
TAATTGTTTAGATTGGTGTG+AGG + chr1_1:76574491-76574510 Msa0044920:CDS 30.0%
TGATTTCTCAATCCTTATGA+TGG + chr1_1:76574520-76574539 Msa0044920:intron 30.0%
TTAGAAACAAGTTTCACACA+TGG - chr1_1:76574577-76574596 None:intergenic 30.0%
CAAGATATTGAATGAGAAGT+AGG - chr1_1:76574961-76574980 None:intergenic 30.0%
TGCAATGACAACAATTAATC+TGG - chr1_1:76575050-76575069 None:intergenic 30.0%
CTGTTATTATGTATTAGGGA+TGG + chr1_1:76575105-76575124 Msa0044920:intron 30.0%
!!! TTTTTTACAAACACGGGTAT+GGG - chr1_1:76575170-76575189 None:intergenic 30.0%
!!! ATTTTTTACAAACACGGGTA+TGG - chr1_1:76575171-76575190 None:intergenic 30.0%
!!! CGAGTATTTTTTACAAACAC+GGG - chr1_1:76575176-76575195 None:intergenic 30.0%
TACCTATAGGTTATGAGAAA+GGG - chr1_1:76575237-76575256 None:intergenic 30.0%
! TCTTTTCATAGTTAAAGTGC+GGG - chr1_1:76575287-76575306 None:intergenic 30.0%
! GTCTTTTCATAGTTAAAGTG+CGG - chr1_1:76575288-76575307 None:intergenic 30.0%
CAAAAATTGTATACCAACAG+AGG + chr1_1:76575420-76575439 Msa0044920:intron 30.0%
AAAATTGTATACCAACAGAG+GGG + chr1_1:76575422-76575441 Msa0044920:intron 30.0%
! AAATATGTATATGCTGGTTG+CGG + chr1_1:76575552-76575571 Msa0044920:intron 30.0%
CTGCAAATTTAAATGGGTAA+GGG - chr1_1:76575595-76575614 None:intergenic 30.0%
TTAAATTTGCAGGTAATACC+CGG + chr1_1:76575603-76575622 Msa0044920:intron 30.0%
TGGACAAAGAAAATTCAACA+AGG - chr1_1:76575780-76575799 None:intergenic 30.0%
AGCAACAGAATATCAAGTAA+AGG - chr1_1:76575853-76575872 None:intergenic 30.0%
TTTACTTGATATTCTGTTGC+TGG + chr1_1:76575852-76575871 Msa0044920:intron 30.0%
!! AGGTGTTGAAATTGAAAGAT+TGG + chr1_1:76575985-76576004 Msa0044920:CDS 30.0%
AGTTCCTGAAATAAATCAGA+AGG - chr1_1:76576014-76576033 None:intergenic 30.0%
TGTGTATTCTTTATAAGGCA+AGG - chr1_1:76576069-76576088 None:intergenic 30.0%
! GAATACACAAATCCTTTTAG+TGG + chr1_1:76576080-76576099 Msa0044920:CDS 30.0%
CCATAAGCAATATATGTTCT+TGG - chr1_1:76576161-76576180 None:intergenic 30.0%
CCAAGAACATATATTGCTTA+TGG + chr1_1:76576158-76576177 Msa0044920:CDS 30.0%
! AGTGTTCTTTTTATGACTAG+TGG + chr1_1:76576550-76576569 Msa0044920:intron 30.0%
TTAATGACACTAATTTCCTC+AGG - chr1_1:76576772-76576791 None:intergenic 30.0%
!!! TTTTCCATTATCTAGCTCTA+TGG + chr1_1:76577049-76577068 Msa0044920:intron 30.0%
!!! TCCCTGTTTTTTGTAACTTT+TGG + chr1_1:76577123-76577142 Msa0044920:intron 30.0%
CTCCAAAAGTTACAAAAAAC+AGG - chr1_1:76577128-76577147 None:intergenic 30.0%
!!! CTGTTTTTTGTAACTTTTGG+AGG + chr1_1:76577126-76577145 Msa0044920:intron 30.0%
TTCTTGAATGAGATATCCTT+TGG + chr1_1:76577433-76577452 Msa0044920:intron 30.0%
TCAATAACCTACATTACCAA+AGG - chr1_1:76577452-76577471 None:intergenic 30.0%
ATAAATGGTCTGATCATGAA+GGG - chr1_1:76577477-76577496 None:intergenic 30.0%
TCAGACCATTTATCTGAATA+TGG + chr1_1:76577484-76577503 Msa0044920:CDS 30.0%
ATGCTCCATATTCAGATAAA+TGG - chr1_1:76577492-76577511 None:intergenic 30.0%
ATGTTGAAATGTCAACAAAG+TGG - chr1_1:76577606-76577625 None:intergenic 30.0%
!! ACATTTCAACATTGACTTGT+AGG + chr1_1:76577614-76577633 Msa0044920:intron 30.0%
AACTTCTGAATAAAAGTCCA+AGG - chr1_1:76577647-76577666 None:intergenic 30.0%
! TTGGACTTTTATTCAGAAGT+TGG + chr1_1:76577646-76577665 Msa0044920:CDS 30.0%
! TGGACTTTTATTCAGAAGTT+GGG + chr1_1:76577647-76577666 Msa0044920:CDS 30.0%
AACAGTATCTATGATACTGT+AGG - chr1_1:76577744-76577763 None:intergenic 30.0%
! AAGCTGATGACGTTAAAATT+GGG - chr1_1:76577819-76577838 None:intergenic 30.0%
! AAAGCTGATGACGTTAAAAT+TGG - chr1_1:76577820-76577839 None:intergenic 30.0%
GAGTCACTTAAAAGAAAGAT+TGG - chr1_1:76577973-76577992 None:intergenic 30.0%
!! TTTAGTAGCTTTGATTTGAG+TGG - chr1_1:76578014-76578033 None:intergenic 30.0%
TGTAATTCACCAATTTCTGA+TGG - chr1_1:76578237-76578256 None:intergenic 30.0%
!! TACTACTAGTCTTACAATCA+TGG - chr1_1:76578446-76578465 None:intergenic 30.0%
AACAGAGAGAAAACCAAAAA+CGG + chr1_1:76578522-76578541 Msa0044920:intron 30.0%
AACCAAAAACGGAAATCAAA+CGG + chr1_1:76578533-76578552 Msa0044920:intron 30.0%
! AATCAAACGGTGTTAAAATG+TGG + chr1_1:76578546-76578565 Msa0044920:intron 30.0%
!!! TACGTGTGTCTTGTTTTAAT+TGG + chr1_1:76578580-76578599 Msa0044920:intron 30.0%
!!! ACGTGTGTCTTGTTTTAATT+GGG + chr1_1:76578581-76578600 Msa0044920:intron 30.0%
! TGTGTTTTATCTCTTATCCT+TGG + chr1_1:76578777-76578796 Msa0044920:intron 30.0%
AAAAGTGAGTTTGTGATGTA+TGG - chr1_1:76578953-76578972 None:intergenic 30.0%
TCAAATCAATGAAAGTAGTC+TGG - chr1_1:76579178-76579197 None:intergenic 30.0%
ACTCTTAATCCCTATTGAAT+AGG + chr1_1:76579228-76579247 Msa0044920:intron 30.0%
!! ATCTCATAGGATTAGTTTCT+TGG - chr1_1:76579312-76579331 None:intergenic 30.0%
AAGATTTCATACACTCAACA+AGG - chr1_1:76579480-76579499 None:intergenic 30.0%
CAATAAATTACACTCCCAAA+TGG - chr1_1:76580094-76580113 None:intergenic 30.0%
! TGATTAGGTTTGGTAATCTT+TGG + chr1_1:76580121-76580140 Msa0044920:intron 30.0%
! GATTAGGTTTGGTAATCTTT+GGG + chr1_1:76580122-76580141 Msa0044920:intron 30.0%
! TCATAACTTGTATGTACCTA+TGG + chr1_1:76580238-76580257 Msa0044920:intron 30.0%
!! ATCAGGTTGATTCAAGTATA+TGG + chr1_1:76580269-76580288 Msa0044920:intron 30.0%
!! TCAGGTTGATTCAAGTATAT+GGG + chr1_1:76580270-76580289 Msa0044920:intron 30.0%
! CAGCATGTTTTGTAAAATGT+GGG + chr1_1:76580369-76580388 Msa0044920:intron 30.0%
!!! GTAATGTATGTTTTAGTAGC+AGG - chr1_1:76580412-76580431 None:intergenic 30.0%
GCTACTAAAACATACATTAC+TGG + chr1_1:76580412-76580431 Msa0044920:intron 30.0%
ATTCACCAGAATATAGGATA+GGG - chr1_1:76580474-76580493 None:intergenic 30.0%
AATTCACCAGAATATAGGAT+AGG - chr1_1:76580475-76580494 None:intergenic 30.0%
AACAAAGTTTATCTCGCTAT+AGG - chr1_1:76580614-76580633 None:intergenic 30.0%
TGTCTTGTGATCTAAACATA+GGG - chr1_1:76580657-76580676 None:intergenic 30.0%
TTTACTCTAGTTAATTGTCG+TGG - chr1_1:76580776-76580795 None:intergenic 30.0%
GAAAACATCAGTCATGTTAA+CGG - chr1_1:76580820-76580839 None:intergenic 30.0%
!!! TTGTTTTTTCTCCCAAAAAC+TGG + chr1_1:76580885-76580904 Msa0044920:intron 30.0%
!!! TGTTTTTTCTCCCAAAAACT+GGG + chr1_1:76580886-76580905 Msa0044920:intron 30.0%
! CATTTCATATTCCCAGTTTT+TGG - chr1_1:76580900-76580919 None:intergenic 30.0%
TAAAATGAGCATGAATTTGG+TGG - chr1_1:76580926-76580945 None:intergenic 30.0%
GCATAAAATGAGCATGAATT+TGG - chr1_1:76580929-76580948 None:intergenic 30.0%
! GTTTTTCTTGATGTACACTT+AGG + chr1_1:76581011-76581030 Msa0044920:intron 30.0%
ACAAGAGGATTCAAATCTAA+CGG - chr1_1:76581071-76581090 None:intergenic 30.0%
GTATGATACTAGATAGAAGT+TGG + chr1_1:76581234-76581253 Msa0044920:intron 30.0%
TATAGTGAAAGTTTCTACCT+AGG - chr1_1:76581420-76581439 None:intergenic 30.0%
!!! TCAGTTTTGAACGAGAAATT+AGG - chr1_1:76581455-76581474 None:intergenic 30.0%
TCACTAACTAGTTACATCTT+AGG - chr1_1:76581945-76581964 None:intergenic 30.0%
AAGATATCCAAAGGTAATGA+AGG - chr1_1:76582143-76582162 None:intergenic 30.0%
TTCATTACCTTTGGATATCT+TGG + chr1_1:76582142-76582161 Msa0044920:intron 30.0%
CTCAAAGGTAATTGAAAACA+TGG - chr1_1:76582183-76582202 None:intergenic 30.0%
! CATGTTTTCAATTACCTTTG+AGG + chr1_1:76582181-76582200 Msa0044920:intron 30.0%
TTATACTATCTCAGTTGACT+AGG - chr1_1:76582274-76582293 None:intergenic 30.0%
AGGTATACTATACAAGTGAT+GGG - chr1_1:76582373-76582392 None:intergenic 30.0%
TAGGTATACTATACAAGTGA+TGG - chr1_1:76582374-76582393 None:intergenic 30.0%
! ACATAGAAAGTTGCATGTTT+TGG - chr1_1:76582484-76582503 None:intergenic 30.0%
! TCTTTTTGTGGTTTTTATGG+GGG - chr1_1:76582714-76582733 None:intergenic 30.0%
! GTCTTTTTGTGGTTTTTATG+GGG - chr1_1:76582715-76582734 None:intergenic 30.0%
! CGTCTTTTTGTGGTTTTTAT+GGG - chr1_1:76582716-76582735 None:intergenic 30.0%
! ACGTCTTTTTGTGGTTTTTA+TGG - chr1_1:76582717-76582736 None:intergenic 30.0%
GTAAATATGTTACAACTTCG+AGG + chr1_1:76582818-76582837 Msa0044920:intron 30.0%
GTTGTTAGGGAACAGAATAA+AGG + chr1_1:76572636-76572655 Msa0044920:CDS 35.0%
GAAAGAAACCACCAAAAATG+AGG + chr1_1:76572744-76572763 Msa0044920:CDS 35.0%
TTAAGTTTCTTGTGGACTTG+TGG - chr1_1:76572772-76572791 None:intergenic 35.0%
!!! CGCTGATTTTAAGTTTCTTG+TGG - chr1_1:76572780-76572799 None:intergenic 35.0%
AGAACAAACTGACACAACAT+AGG - chr1_1:76573076-76573095 None:intergenic 35.0%
GAAGAATAGTTAATCGTGGA+AGG - chr1_1:76573338-76573357 None:intergenic 35.0%
ACTATAGGAAATGAAGCGTA+AGG + chr1_1:76573401-76573420 Msa0044920:intron 35.0%
TTCTCTAAGTATCTGCTGAA+AGG + chr1_1:76573453-76573472 Msa0044920:CDS 35.0%
GACTTCTTCCACATTTAAGA+CGG + chr1_1:76573475-76573494 Msa0044920:CDS 35.0%
! ACGAGGTATTCCTATATAGT+CGG + chr1_1:76573542-76573561 Msa0044920:intron 35.0%
!!! GATTTTGGGATGTGAATTAC+AGG + chr1_1:76573605-76573624 Msa0044920:intron 35.0%
!! TCATCTTTAGAATAATCCGC+CGG - chr1_1:76573659-76573678 None:intergenic 35.0%
! AAGCTTGAGTATGATTTTCG+AGG + chr1_1:76573898-76573917 Msa0044920:CDS 35.0%
! TCATTATCAGCTTTTGGACA+AGG - chr1_1:76574051-76574070 None:intergenic 35.0%
! GCTGATAATGAATGTGATCA+TGG + chr1_1:76574060-76574079 Msa0044920:CDS 35.0%
ACTAACTCAGAGATGCAATT+TGG - chr1_1:76574114-76574133 None:intergenic 35.0%
AATCAAGCTTCAAGATGTAG+AGG + chr1_1:76574161-76574180 Msa0044920:CDS 35.0%
AGTACATTGCTGACAATTAC+AGG - chr1_1:76574369-76574388 None:intergenic 35.0%
AATGTACTTGAATGCACATC+TGG + chr1_1:76574381-76574400 Msa0044920:CDS 35.0%
! AACTACATCGTATTTGGAGT+TGG - chr1_1:76574454-76574473 None:intergenic 35.0%
! CTCCAAATACGATGTAGTTT+TGG + chr1_1:76574455-76574474 Msa0044920:CDS 35.0%
TTTCTCAATCCTTATGATGG+AGG + chr1_1:76574523-76574542 Msa0044920:intron 35.0%
! TTCTCAATCCTTATGATGGA+GGG + chr1_1:76574524-76574543 Msa0044920:intron 35.0%
!! CGGTTTTGTAGAGTTAAGTT+AGG - chr1_1:76574635-76574654 None:intergenic 35.0%
GTTTGATAAGAGTTCCACAT+TGG - chr1_1:76574715-76574734 None:intergenic 35.0%
!!! GCCAATTTTTTGAGTGCAAT+TGG + chr1_1:76574857-76574876 Msa0044920:intron 35.0%
GCCAATTGCACTCAAAAAAT+TGG - chr1_1:76574861-76574880 None:intergenic 35.0%
! CAGCGTTTGTTGAAAATGTT+GGG - chr1_1:76574935-76574954 None:intergenic 35.0%
TTATGTATTAGGGATGGCAA+TGG + chr1_1:76575111-76575130 Msa0044920:intron 35.0%
TATGTATTAGGGATGGCAAT+GGG + chr1_1:76575112-76575131 Msa0044920:intron 35.0%
! TTTTTACAAACACGGGTATG+GGG - chr1_1:76575169-76575188 None:intergenic 35.0%
GTACCTATAGGTTATGAGAA+AGG - chr1_1:76575238-76575257 None:intergenic 35.0%
!! AGGGGATTGGTTATTGTATT+AGG + chr1_1:76575440-76575459 Msa0044920:intron 35.0%
! AATATGTATATGCTGGTTGC+GGG + chr1_1:76575553-76575572 Msa0044920:intron 35.0%
CCTGCAAATTTAAATGGGTA+AGG - chr1_1:76575596-76575615 None:intergenic 35.0%
CCTTACCCATTTAAATTTGC+AGG + chr1_1:76575593-76575612 Msa0044920:intron 35.0%
AAAAATACCCACAATGGGTA+GGG - chr1_1:76575662-76575681 None:intergenic 35.0%
TAAAAATACCCACAATGGGT+AGG - chr1_1:76575663-76575682 None:intergenic 35.0%
!!! TATTTTTAGCGGGTATCCAT+CGG + chr1_1:76575675-76575694 Msa0044920:intron 35.0%
TGCAGTAAGTATACGTAACA+GGG - chr1_1:76575720-76575739 None:intergenic 35.0%
ATGCAGTAAGTATACGTAAC+AGG - chr1_1:76575721-76575740 None:intergenic 35.0%
ACTGCATGTTGATGTTAAGT+TGG + chr1_1:76575734-76575753 Msa0044920:intron 35.0%
! TTGAGTTGTTCATTGAATGC+AGG + chr1_1:76575893-76575912 Msa0044920:intron 35.0%
TGAGTTGTTCATTGAATGCA+GGG + chr1_1:76575894-76575913 Msa0044920:intron 35.0%
AATATCCACCAATTCTTCAC+TGG + chr1_1:76575924-76575943 Msa0044920:CDS 35.0%
ATATCCACCAATTCTTCACT+GGG + chr1_1:76575925-76575944 Msa0044920:CDS 35.0%
TCTTTCAATTTCAACACCTC+AGG - chr1_1:76575984-76576003 None:intergenic 35.0%
TCCTGAAATAAATCAGAAGG+AGG - chr1_1:76576011-76576030 None:intergenic 35.0%
TCAGGCTTTACACAATAATC+CGG - chr1_1:76576131-76576150 None:intergenic 35.0%
TTATTGTGTAAAGCCTGACA+TGG + chr1_1:76576133-76576152 Msa0044920:CDS 35.0%
TATTGTGTAAAGCCTGACAT+GGG + chr1_1:76576134-76576153 Msa0044920:CDS 35.0%
GTGCTAACAAAGAATTGATC+AGG - chr1_1:76576624-76576643 None:intergenic 35.0%
TAAAGTGGAACTAAAACCTG+AGG + chr1_1:76576753-76576772 Msa0044920:CDS 35.0%
!! CAATTGCATTCCTTTAAAGC+AGG + chr1_1:76577008-76577027 Msa0044920:CDS 35.0%
!! TCCTTTAAAGCAGGTAGAAT+CGG + chr1_1:76577017-76577036 Msa0044920:intron 35.0%
TTAGCAGCAGAGAAAGTAAA+TGG - chr1_1:76577088-76577107 None:intergenic 35.0%
TTCAAATACACATGCCACAA+AGG + chr1_1:76577196-76577215 Msa0044920:intron 35.0%
TGTTTCAACACAATCCTTTG+TGG - chr1_1:76577213-76577232 None:intergenic 35.0%
AAATGCATTTCCTTTCTCTC+TGG - chr1_1:76577313-76577332 None:intergenic 35.0%
! TGATTCAACCAATGACCTTT+TGG - chr1_1:76577353-76577372 None:intergenic 35.0%
!! GAGATATCCTTTGGTAATGT+AGG + chr1_1:76577442-76577461 Msa0044920:intron 35.0%
TAAATGGTCTGATCATGAAG+GGG - chr1_1:76577476-76577495 None:intergenic 35.0%
GATAAATGGTCTGATCATGA+AGG - chr1_1:76577478-76577497 None:intergenic 35.0%
!! GTTCCTTTGTTGTTTGTAGA+TGG + chr1_1:76577556-76577575 Msa0044920:intron 35.0%
AGTCCATCTACAAACAACAA+AGG - chr1_1:76577562-76577581 None:intergenic 35.0%
TTACCTTCAGATTTCTGACT+TGG - chr1_1:76577706-76577725 None:intergenic 35.0%
! TTTCGTTAGTTTAGTCACAC+AGG + chr1_1:76577837-76577856 Msa0044920:intron 35.0%
AGTTTAGTCACACAGGATAA+TGG + chr1_1:76577844-76577863 Msa0044920:intron 35.0%
AAAGAAAGATTGGAGCTCAT+AGG - chr1_1:76577963-76577982 None:intergenic 35.0%
!! GTGCATTCTTTGTTATTCAC+CGG + chr1_1:76578119-76578138 Msa0044920:intron 35.0%
AAGGAACTGCTCGTATTTAA+CGG + chr1_1:76578160-76578179 Msa0044920:CDS 35.0%
TGAAAATAAGTTCTTGTCGG+AGG - chr1_1:76578378-76578397 None:intergenic 35.0%
CAGCAAAAACAGTACCTATA+TGG + chr1_1:76578606-76578625 Msa0044920:intron 35.0%
TATAGACGTTACACACTTCT+TGG - chr1_1:76578688-76578707 None:intergenic 35.0%
! ATAAAATTTTGCTTGGAGCG+AGG + chr1_1:76578705-76578724 Msa0044920:intron 35.0%
TTTAGAGAATACAAGCACCA+AGG - chr1_1:76578797-76578816 None:intergenic 35.0%
ATGGCTTCAACAATTTGCAT+AGG - chr1_1:76578934-76578953 None:intergenic 35.0%
!! CATAGGATTAGTTTCTTGGT+TGG - chr1_1:76579308-76579327 None:intergenic 35.0%
! TTTTATATATCCTCGCTCAC+CGG + chr1_1:76579376-76579395 Msa0044920:intron 35.0%
TTGACATGATGACATAACAC+GGG - chr1_1:76579532-76579551 None:intergenic 35.0%
GTTGACATGATGACATAACA+CGG - chr1_1:76579533-76579552 None:intergenic 35.0%
! TTTTACTGATGACTGCTTCT+TGG + chr1_1:76579737-76579756 Msa0044920:intron 35.0%
!!! CTTCAGGCGTTTTTTTGTTA+TGG + chr1_1:76579840-76579859 Msa0044920:intron 35.0%
! ACTGTTCACTTTGTTGTCAA+AGG + chr1_1:76579890-76579909 Msa0044920:intron 35.0%
TGCCATTAAATTTACAGGTC+TGG + chr1_1:76580018-76580037 Msa0044920:intron 35.0%
GCCATTAAATTTACAGGTCT+GGG + chr1_1:76580019-76580038 Msa0044920:intron 35.0%
TCCCAGACCTGTAAATTTAA+TGG - chr1_1:76580023-76580042 None:intergenic 35.0%
GTATATTTACGCACAAACCT+TGG - chr1_1:76580049-76580068 None:intergenic 35.0%
TTTGTGCGTAAATATACCAG+AGG + chr1_1:76580052-76580071 Msa0044920:intron 35.0%
TTGTGCGTAAATATACCAGA+GGG + chr1_1:76580053-76580072 Msa0044920:intron 35.0%
AGAGAGAGATTGAATCCATT+TGG + chr1_1:76580076-76580095 Msa0044920:intron 35.0%
GAGAGAGATTGAATCCATTT+GGG + chr1_1:76580077-76580096 Msa0044920:intron 35.0%
TTGAGTCACTTGATTAGGTT+TGG + chr1_1:76580111-76580130 Msa0044920:intron 35.0%
!! GCACCGGTTAAAACAAAATA+TGG - chr1_1:76580173-76580192 None:intergenic 35.0%
! GTATAATGTTTCAAGTGCAC+CGG - chr1_1:76580189-76580208 None:intergenic 35.0%
AAACGTACACCAATACAAGT+CGG - chr1_1:76580213-76580232 None:intergenic 35.0%
TTACAAAACATGCTGCAACA+AGG - chr1_1:76580364-76580383 None:intergenic 35.0%
! GCAGCATGTTTTGTAAAATG+TGG + chr1_1:76580368-76580387 Msa0044920:intron 35.0%
TACTTCCCTATCCTATATTC+TGG + chr1_1:76580466-76580485 Msa0044920:intron 35.0%
GTGTCTTGTGATCTAAACAT+AGG - chr1_1:76580658-76580677 None:intergenic 35.0%
! CATTTTATGCATTTGTCGAG+AGG + chr1_1:76580939-76580958 Msa0044920:intron 35.0%
TCAATCTAACGGTTAAGCAT+TGG - chr1_1:76581167-76581186 None:intergenic 35.0%
AACCGTTAGATTGACATGTT+TGG + chr1_1:76581173-76581192 Msa0044920:intron 35.0%
TGCCAAACATGTCAATCTAA+CGG - chr1_1:76581178-76581197 None:intergenic 35.0%
ACAGCCAAAGTGAATGTAAT+TGG - chr1_1:76581316-76581335 None:intergenic 35.0%
CAAAACTGAAGCAATTCAAG+AGG + chr1_1:76581466-76581485 Msa0044920:intron 35.0%
!! TTCAAGAGGAAGGTATTTCT+AGG + chr1_1:76581480-76581499 Msa0044920:intron 35.0%
CTCCTAAGTACTTACTACTA+GGG - chr1_1:76581888-76581907 None:intergenic 35.0%
! TCTCTCATAGTTCTACAAAC+CGG - chr1_1:76582012-76582031 None:intergenic 35.0%
AGTGTCCTAAGATTCATAGA+TGG + chr1_1:76582096-76582115 Msa0044920:intron 35.0%
GTGTCCTAAGATTCATAGAT+GGG + chr1_1:76582097-76582116 Msa0044920:intron 35.0%
TCTACCCATCTATGAATCTT+AGG - chr1_1:76582104-76582123 None:intergenic 35.0%
!! GTTTTCAATTACCTTTGAGG+TGG + chr1_1:76582184-76582203 Msa0044920:intron 35.0%
TAGTATAAACCCCACATGTA+AGG + chr1_1:76582286-76582305 Msa0044920:intron 35.0%
TGGGACGTTACTAACATAAT+TGG - chr1_1:76582345-76582364 None:intergenic 35.0%
TTATGTTAGTAACGTCCCAA+CGG + chr1_1:76582346-76582365 Msa0044920:intron 35.0%
GGTATACTATACAAGTGATG+GGG - chr1_1:76582372-76582391 None:intergenic 35.0%
CTTCCCCCTATTTATTATGT+TGG - chr1_1:76582432-76582451 None:intergenic 35.0%
GGTTACAGAAAAGTAAGTAG+CGG - chr1_1:76582463-76582482 None:intergenic 35.0%
!! AGTAGAGTATCGTATCCATA+GGG - chr1_1:76582606-76582625 None:intergenic 35.0%
!! AAGTAGAGTATCGTATCCAT+AGG - chr1_1:76582607-76582626 None:intergenic 35.0%
!! ATCACCATTTTCGCCATTTT+GGG - chr1_1:76582924-76582943 None:intergenic 35.0%
ATATGAGATGTAACCTGACA+AGG - chr1_1:76583028-76583047 None:intergenic 35.0%
CGATGATCATGATCAGGAAT+GGG - chr1_1:76572253-76572272 None:intergenic 40.0%
TCGATGATCATGATCAGGAA+TGG - chr1_1:76572254-76572273 None:intergenic 40.0%
GTTTCTCGATGATCATGATC+AGG - chr1_1:76572259-76572278 None:intergenic 40.0%
TCATCGAGAAACACAACCTA+CGG + chr1_1:76572267-76572286 Msa0044920:CDS 40.0%
AAGGTGATAACATTGCAGCT+AGG + chr1_1:76572500-76572519 Msa0044920:CDS 40.0%
AGGTGATAACATTGCAGCTA+GGG + chr1_1:76572501-76572520 Msa0044920:CDS 40.0%
GGCAGAAAGAAAAAGAAACG+TGG + chr1_1:76572565-76572584 Msa0044920:CDS 40.0%
GGAAGAAACTGGTAAAGATG+TGG + chr1_1:76572657-76572676 Msa0044920:CDS 40.0%
AGGCTCTTCATCATTTCAAC+TGG + chr1_1:76572687-76572706 Msa0044920:CDS 40.0%
!! TTGTGGAACCTCATTTTTGG+TGG - chr1_1:76572755-76572774 None:intergenic 40.0%
! GACTTGTGGAACCTCATTTT+TGG - chr1_1:76572758-76572777 None:intergenic 40.0%
AATCAGCGAGAGTAATGCTA+AGG + chr1_1:76572792-76572811 Msa0044920:CDS 40.0%
! GGTGTTATACGCTGTAATTG+TGG + chr1_1:76572862-76572881 Msa0044920:intron 40.0%
! TTGACATTGATGGCACATTG+AGG - chr1_1:76572930-76572949 None:intergenic 40.0%
! TTTTGTGCATCTAACAACGC+TGG - chr1_1:76572966-76572985 None:intergenic 40.0%
GAAAGAGAGTGATATTGCCA+AGG + chr1_1:76573234-76573253 Msa0044920:intron 40.0%
TGCAATTATCACAGCACACA+GGG - chr1_1:76573264-76573283 None:intergenic 40.0%
TTGCAATTATCACAGCACAC+AGG - chr1_1:76573265-76573284 None:intergenic 40.0%
AATAGTTAATCGTGGAAGGG+TGG - chr1_1:76573334-76573353 None:intergenic 40.0%
! TCTTCCACATTTAAGACGGT+TGG + chr1_1:76573479-76573498 Msa0044920:CDS 40.0%
TCATCCAACCGTCTTAAATG+TGG - chr1_1:76573486-76573505 None:intergenic 40.0%
TGTTCTGGTAAGGACTGATT+TGG + chr1_1:76573684-76573703 Msa0044920:intron 40.0%
! AGCATTTTGTACAGCTTCTG+TGG - chr1_1:76573807-76573826 None:intergenic 40.0%
! AGAAAGTGTATCACATGCAG+AGG + chr1_1:76573963-76573982 Msa0044920:CDS 40.0%
ATGGTTTCCTTGAACTGAGA+AGG + chr1_1:76574079-76574098 Msa0044920:CDS 40.0%
! GAAGTATCCTTCTCAGTTCA+AGG - chr1_1:76574089-76574108 None:intergenic 40.0%
AACTCAGAGATGCAATTTGG+AGG - chr1_1:76574111-76574130 None:intergenic 40.0%
TAGAGGAGACTCGTGATAAT+AGG + chr1_1:76574178-76574197 Msa0044920:CDS 40.0%
ATATCATCGGTGTACCTAAC+AGG - chr1_1:76574219-76574238 None:intergenic 40.0%
! AATGCACATCTGGTTTAAGC+TGG + chr1_1:76574391-76574410 Msa0044920:CDS 40.0%
! ATGCACATCTGGTTTAAGCT+GGG + chr1_1:76574392-76574411 Msa0044920:CDS 40.0%
!!! CGATGTAGTTTTGGATGTGA+AGG + chr1_1:76574464-76574483 Msa0044920:CDS 40.0%
! TCTCAATCCTTATGATGGAG+GGG + chr1_1:76574525-76574544 Msa0044920:intron 40.0%
AGGCTATATCTCATCCAATG+TGG + chr1_1:76574698-76574717 Msa0044920:intron 40.0%
!! GCACTCAAAAAATTGGCTTG+AGG - chr1_1:76574854-76574873 None:intergenic 40.0%
! GCAGCGTTTGTTGAAAATGT+TGG - chr1_1:76574936-76574955 None:intergenic 40.0%
TGCCCTTTCTCATAACCTAT+AGG + chr1_1:76575232-76575251 Msa0044920:intron 40.0%
! ATGAGCACTAAGGTACCTAT+AGG - chr1_1:76575250-76575269 None:intergenic 40.0%
CATAGTTAAAGTGCGGGTAA+TGG - chr1_1:76575281-76575300 None:intergenic 40.0%
! ATATGTATATGCTGGTTGCG+GGG + chr1_1:76575554-76575573 Msa0044920:intron 40.0%
CCGCTAAAAATACCCACAAT+GGG - chr1_1:76575667-76575686 None:intergenic 40.0%
!!! CCCATTGTGGGTATTTTTAG+CGG + chr1_1:76575664-76575683 Msa0044920:intron 40.0%
!!! CCATTGTGGGTATTTTTAGC+GGG + chr1_1:76575665-76575684 Msa0044920:intron 40.0%
!!! ATTTTTAGCGGGTATCCATC+GGG + chr1_1:76575676-76575695 Msa0044920:intron 40.0%
GTAAGTATACGTAACAGGGA+TGG - chr1_1:76575716-76575735 None:intergenic 40.0%
TTGTGTACCCAGTGAAGAAT+TGG - chr1_1:76575935-76575954 None:intergenic 40.0%
TTCTTCACTGGGTACACAAA+TGG + chr1_1:76575936-76575955 Msa0044920:CDS 40.0%
GCCTCCTTCTGATTTATTTC+AGG + chr1_1:76576007-76576026 Msa0044920:CDS 40.0%
AGGTTGAGAGAACCACTAAA+AGG - chr1_1:76576095-76576114 None:intergenic 40.0%
ATTGTGTAAAGCCTGACATG+GGG + chr1_1:76576135-76576154 Msa0044920:CDS 40.0%
TTTACTCAAAATCTCGGACG+CGG + chr1_1:76576182-76576201 Msa0044920:CDS 40.0%
! GTTGACTCATATCGCTAAAG+TGG + chr1_1:76576738-76576757 Msa0044920:CDS 40.0%
CATCATTAGTGTCAGAGAGT+TGG - chr1_1:76576870-76576889 None:intergenic 40.0%
CAACTCTCTGACACTAATGA+TGG + chr1_1:76576868-76576887 Msa0044920:CDS 40.0%
!!! GTGCTCTCTGGGATATTTTT+CGG + chr1_1:76576923-76576942 Msa0044920:CDS 40.0%
GCATCCATAGAGCTAGATAA+TGG - chr1_1:76577056-76577075 None:intergenic 40.0%
AGAAAGTAAATGGTCACGAG+GGG - chr1_1:76577078-76577097 None:intergenic 40.0%
GAGAAAGTAAATGGTCACGA+GGG - chr1_1:76577079-76577098 None:intergenic 40.0%
AGAGAAAGTAAATGGTCACG+AGG - chr1_1:76577080-76577099 None:intergenic 40.0%
GATGTAGATACCAGTCCAAA+AGG + chr1_1:76577335-76577354 Msa0044920:intron 40.0%
ATACCAGTCCAAAAGGTCAT+TGG + chr1_1:76577342-76577361 Msa0044920:intron 40.0%
AAATGGTCTGATCATGAAGG+GGG - chr1_1:76577475-76577494 None:intergenic 40.0%
CAAACCAGCAGGAATGAAAA+CGG - chr1_1:76577678-76577697 None:intergenic 40.0%
!! TTCAGATTTCTGACTTGGTG+AGG - chr1_1:76577701-76577720 None:intergenic 40.0%
TCACCAAGTCAGAAATCTGA+AGG + chr1_1:76577700-76577719 Msa0044920:CDS 40.0%
!! CTTATTTCTGTCCAGAAAGG+CGG - chr1_1:76577872-76577891 None:intergenic 40.0%
GCCTTTCTGGACAGAAATAA+GGG + chr1_1:76577871-76577890 Msa0044920:intron 40.0%
!! TCCCTTATTTCTGTCCAGAA+AGG - chr1_1:76577875-76577894 None:intergenic 40.0%
AAATAAGGGATGCCATTGCA+AGG + chr1_1:76577885-76577904 Msa0044920:intron 40.0%
AGTGCTTTATGTGACATCCA+CGG - chr1_1:76577921-76577940 None:intergenic 40.0%
GTATGCTATTGAGTATGGTG+GGG - chr1_1:76578048-76578067 None:intergenic 40.0%
CGTATGCTATTGAGTATGGT+GGG - chr1_1:76578049-76578068 None:intergenic 40.0%
TCGTATGCTATTGAGTATGG+TGG - chr1_1:76578050-76578069 None:intergenic 40.0%
AGGTCGTATGCTATTGAGTA+TGG - chr1_1:76578053-76578072 None:intergenic 40.0%
GTTAGTAAACCACAGCTTCA+AGG - chr1_1:76578073-76578092 None:intergenic 40.0%
TCTGGGAAGTAACACAAAAC+CGG - chr1_1:76578141-76578160 None:intergenic 40.0%
!!! GTTTTGTGTTACTTCCCAGA+AGG + chr1_1:76578141-76578160 Msa0044920:intron 40.0%
AAATACGAGCAGTTCCTTCT+GGG - chr1_1:76578158-76578177 None:intergenic 40.0%
TAAATACGAGCAGTTCCTTC+TGG - chr1_1:76578159-76578178 None:intergenic 40.0%
AGGAACTGCTCGTATTTAAC+GGG + chr1_1:76578161-76578180 Msa0044920:CDS 40.0%
CTCGTATTTAACGGGAAATC+CGG + chr1_1:76578169-76578188 Msa0044920:CDS 40.0%
GGAAATCCGGTTGTGATTAT+TGG + chr1_1:76578182-76578201 Msa0044920:CDS 40.0%
AATCCGGTTGTGATTATTGG+TGG + chr1_1:76578185-76578204 Msa0044920:CDS 40.0%
GAACGTAAGCCATCAGAAAT+TGG + chr1_1:76578225-76578244 Msa0044920:CDS 40.0%
TCATTGTCTGAGGAATTGGT+TGG - chr1_1:76578268-76578287 None:intergenic 40.0%
GAGGTTTATTGTGATGTCAG+CGG - chr1_1:76578359-76578378 None:intergenic 40.0%
AAGAGAATCGACACAGATAG+AGG + chr1_1:76578491-76578510 Msa0044920:intron 40.0%
AGAGAATCGACACAGATAGA+GGG + chr1_1:76578492-76578511 Msa0044920:intron 40.0%
!! CACCGTTTGATTTCCGTTTT+TGG - chr1_1:76578538-76578557 None:intergenic 40.0%
CAGTACCTATATGGTACTGT+AGG + chr1_1:76578615-76578634 Msa0044920:intron 40.0%
ACTTGCCTACAGTACCATAT+AGG - chr1_1:76578623-76578642 None:intergenic 40.0%
TCCTAATTAGTACAGCGTGA+TGG + chr1_1:76578902-76578921 Msa0044920:intron 40.0%
TTTGTCTCTCCCGAACATAT+TGG + chr1_1:76579074-76579093 Msa0044920:CDS 40.0%
AAGCACTCACCAATATGTTC+GGG - chr1_1:76579086-76579105 None:intergenic 40.0%
! GAAGCACTCACCAATATGTT+CGG - chr1_1:76579087-76579106 None:intergenic 40.0%
TGTGATTTATCGGAAGCTTG+CGG - chr1_1:76579127-76579146 None:intergenic 40.0%
GCATAACAGTATTGCTGACA+AGG + chr1_1:76579414-76579433 Msa0044920:intron 40.0%
CGGGAACATAGAACTGAAAT+TGG - chr1_1:76579513-76579532 None:intergenic 40.0%
CAATATTAGAAGCAGACACC+AGG - chr1_1:76579590-76579609 None:intergenic 40.0%
CGGGAACATAGAACTGAAAT+AGG - chr1_1:76579513-76579532 None:intergenic 40.0%
TTGACATGATGACAGAACAC+GGG - chr1_1:76579687-76579706 None:intergenic 40.0%
GTTGACATGATGACAGAACA+CGG - chr1_1:76579688-76579707 None:intergenic 40.0%
CACATCAAGCATAGCATGTA+CGG - chr1_1:76579782-76579801 None:intergenic 40.0%
GGTTAGTGATTGCAAACTTC+AGG + chr1_1:76579824-76579843 Msa0044920:intron 40.0%
!!! GCAGTTTTGTTAGTCTCTCT+AGG + chr1_1:76579947-76579966 Msa0044920:intron 40.0%
!! CATTATACGCCGACTTGTAT+TGG + chr1_1:76580201-76580220 Msa0044920:intron 40.0%
! TACCTATGGTGCTAACTATC+AGG + chr1_1:76580252-76580271 Msa0044920:intron 40.0%
AACCTGATAGTTAGCACCAT+AGG - chr1_1:76580257-76580276 None:intergenic 40.0%
TAGAGTAAATTGCACTCACC+TGG + chr1_1:76580787-76580806 Msa0044920:intron 40.0%
! GCAAAGAAAAGCACAACAAG+AGG - chr1_1:76581086-76581105 None:intergenic 40.0%
!! TGCTCATCATGAGAAGTGTT+TGG + chr1_1:76581103-76581122 Msa0044920:intron 40.0%
!! ATGAGAAGTGTTTGGATCCT+CGG + chr1_1:76581111-76581130 Msa0044920:intron 40.0%
!! ATCTAACGGTTAAGCATTGG+CGG - chr1_1:76581164-76581183 None:intergenic 40.0%
AGATAGAAGTTGGATGCACA+CGG + chr1_1:76581244-76581263 Msa0044920:intron 40.0%
GGTTTGAGCTAAAAGAAGCA+GGG - chr1_1:76581399-76581418 None:intergenic 40.0%
AGGTTTGAGCTAAAAGAAGC+AGG - chr1_1:76581400-76581419 None:intergenic 40.0%
!!! GCTTCTTTTAGCTCAAACCT+AGG + chr1_1:76581400-76581419 Msa0044920:intron 40.0%
ACTGAAGCAATTCAAGAGGA+AGG + chr1_1:76581470-76581489 Msa0044920:intron 40.0%
!! GAAGGTATTTCTAGGAGCTT+TGG + chr1_1:76581488-76581507 Msa0044920:intron 40.0%
GACCCTAGTAGTAAGTACTT+AGG + chr1_1:76581883-76581902 Msa0044920:intron 40.0%
CCTCCTAAGTACTTACTACT+AGG - chr1_1:76581889-76581908 None:intergenic 40.0%
CCTAGTAGTAAGTACTTAGG+AGG + chr1_1:76581886-76581905 Msa0044920:intron 40.0%
GTAAACCTAGTAGAACCTTC+CGG + chr1_1:76581990-76582009 Msa0044920:intron 40.0%
! TCATAGTTCTACAAACCGGA+AGG - chr1_1:76582008-76582027 None:intergenic 40.0%
! ATGAAGGCCAATGTTTCTGT+AGG - chr1_1:76582127-76582146 None:intergenic 40.0%
!! ACATTGGCCTTCATTACCTT+TGG + chr1_1:76582133-76582152 Msa0044920:intron 40.0%
ACAGGATGATCCTTACATGT+GGG - chr1_1:76582299-76582318 None:intergenic 40.0%
CAGAAAAGTAAGTAGCGGTT+AGG - chr1_1:76582458-76582477 None:intergenic 40.0%
! GATCACCATTTTCGCCATTT+TGG - chr1_1:76582925-76582944 None:intergenic 40.0%
AATGGCGAAAATGGTGATCT+AGG + chr1_1:76582926-76582945 Msa0044920:CDS 40.0%
ATGGCGAAAATGGTGATCTA+GGG + chr1_1:76582927-76582946 Msa0044920:CDS 40.0%
TTGATGCTCTTCTTCTTCGT+CGG + chr1_1:76582951-76582970 Msa0044920:CDS 40.0%
AGATGTAACCTGACAAGGAA+CGG - chr1_1:76583023-76583042 None:intergenic 40.0%
! GAATGGGTTCATCTGGATCA+GGG - chr1_1:76572237-76572256 None:intergenic 45.0%
! TGATCAGGAATGGGTTCATC+TGG - chr1_1:76572244-76572263 None:intergenic 45.0%
TATGCATGTTGGCGCCAAAA+CGG + chr1_1:76572441-76572460 Msa0044920:CDS 45.0%
TTCATCCTCTGCTAAAGCTG+CGG + chr1_1:76572525-76572544 Msa0044920:CDS 45.0%
ACTGGTAAAGATGTGGTAGC+TGG + chr1_1:76572664-76572683 Msa0044920:CDS 45.0%
GCAATTGCAAAGCATGCTTG+CGG + chr1_1:76573281-76573300 Msa0044920:intron 45.0%
TAAGGCTGAAACCAACAACG+AGG + chr1_1:76573419-76573438 Msa0044920:CDS 45.0%
TTGAGAAGGAAAGAGAAGCC+AGG + chr1_1:76573517-76573536 Msa0044920:CDS 45.0%
TATAGGAATACCTCGTCTCC+TGG - chr1_1:76573538-76573557 None:intergenic 45.0%
CTAAAGATGAGCGTGTGTTC+TGG + chr1_1:76573669-76573688 Msa0044920:CDS 45.0%
CGAGGTCGCAATTATCTACA+TGG + chr1_1:76573916-76573935 Msa0044920:CDS 45.0%
GGTCGCAATTATCTACATGG+TGG + chr1_1:76573919-76573938 Msa0044920:CDS 45.0%
ATGAGTCTACGATTCGTGAG+TGG + chr1_1:76573986-76574005 Msa0044920:CDS 45.0%
ATTCGTGAGTGGTCAAGATC+TGG + chr1_1:76573997-76574016 Msa0044920:CDS 45.0%
TTCGTGAGTGGTCAAGATCT+GGG + chr1_1:76573998-76574017 Msa0044920:CDS 45.0%
TGGACAAGGAATGCTACCAT+CGG - chr1_1:76574037-76574056 None:intergenic 45.0%
GTTCTTGCTCGAAACCTGTT+AGG + chr1_1:76574202-76574221 Msa0044920:CDS 45.0%
! TTTCAATGGCACTGGAGCAA+AGG + chr1_1:76574339-76574358 Msa0044920:CDS 45.0%
! TTCAATGGCACTGGAGCAAA+GGG + chr1_1:76574340-76574359 Msa0044920:CDS 45.0%
GTAAGAACCCCTCCATCATA+AGG - chr1_1:76574535-76574554 None:intergenic 45.0%
! TATGATGGAGGGGTTCTTAC+AGG + chr1_1:76574535-76574554 Msa0044920:intron 45.0%
TCTACAAAACCGCCTTGTGA+GGG + chr1_1:76574643-76574662 Msa0044920:intron 45.0%
GATATACATCTCCCCTCACA+AGG - chr1_1:76574658-76574677 None:intergenic 45.0%
ACTGTAGTACCCTACCCATA+GGG - chr1_1:76575140-76575159 None:intergenic 45.0%
!! TAAAGTGCGGGTAATGGATG+CGG - chr1_1:76575275-76575294 None:intergenic 45.0%
TGTATACCAACAGAGGGGAT+TGG + chr1_1:76575427-76575446 Msa0044920:intron 45.0%
CAATAACCAATCCCCTCTGT+TGG - chr1_1:76575436-76575455 None:intergenic 45.0%
AAACCCTGCTTTCATGGCTT+CGG - chr1_1:76575637-76575656 None:intergenic 45.0%
AGGGTAAAACCCTGCTTTCA+TGG - chr1_1:76575643-76575662 None:intergenic 45.0%
! GGTTTTACCCTACCCATTGT+GGG + chr1_1:76575652-76575671 Msa0044920:intron 45.0%
CCCGCTAAAAATACCCACAA+TGG - chr1_1:76575668-76575687 None:intergenic 45.0%
TACGTAACAGGGATGGCAAT+TGG - chr1_1:76575709-76575728 None:intergenic 45.0%
AGACTGTTAGGCAGTACAAC+TGG - chr1_1:76575800-76575819 None:intergenic 45.0%
GTTGTACTGCCTAACAGTCT+CGG + chr1_1:76575800-76575819 Msa0044920:intron 45.0%
TTGTACTGCCTAACAGTCTC+GGG + chr1_1:76575801-76575820 Msa0044920:intron 45.0%
ACAATTCACCCGAGACTGTT+AGG - chr1_1:76575812-76575831 None:intergenic 45.0%
TGTACCCAGTGAAGAATTGG+TGG - chr1_1:76575932-76575951 None:intergenic 45.0%
! ATGAACTCAGCATGATGACG+AGG - chr1_1:76576041-76576060 None:intergenic 45.0%
CTGCATCAGACACATCACAA+TGG - chr1_1:76576226-76576245 None:intergenic 45.0%
AGCACCTTGAGCAAGATAAG+AGG + chr1_1:76576806-76576825 Msa0044920:CDS 45.0%
GCACCTTGAGCAAGATAAGA+GGG + chr1_1:76576807-76576826 Msa0044920:CDS 45.0%
CAAGATAAGAGGGAGCTACA+TGG + chr1_1:76576817-76576836 Msa0044920:CDS 45.0%
! CACTAATGATGGTGACCTGA+TGG + chr1_1:76576879-76576898 Msa0044920:CDS 45.0%
! AATGATGGTGACCTGATGGT+TGG + chr1_1:76576883-76576902 Msa0044920:CDS 45.0%
! GCCGATTCTACCTGCTTTAA+AGG - chr1_1:76577021-76577040 None:intergenic 45.0%
!! AACTTTTGGAGGGTTGCACT+AGG + chr1_1:76577137-76577156 Msa0044920:intron 45.0%
TGTTCAGTGACCAGAGAGAA+AGG + chr1_1:76577300-76577319 Msa0044920:intron 45.0%
! CAACCAATGACCTTTTGGAC+TGG - chr1_1:76577348-76577367 None:intergenic 45.0%
GACTTGTAGGAATTGAGCCT+TGG + chr1_1:76577627-76577646 Msa0044920:intron 45.0%
CGCCTTTCTGGACAGAAATA+AGG + chr1_1:76577870-76577889 Msa0044920:intron 45.0%
CGGTTCATTGTCTGAGGAAT+TGG - chr1_1:76578272-76578291 None:intergenic 45.0%
!! ATTCGTCGGTTCATTGTCTG+AGG - chr1_1:76578278-76578297 None:intergenic 45.0%
GTGGTTCATGAATCACGACA+TGG - chr1_1:76578321-76578340 None:intergenic 45.0%
TCGTGATTCATGAACCACTC+TGG + chr1_1:76578323-76578342 Msa0044920:CDS 45.0%
ATGATTTGACGTTAGCGCCA+TGG - chr1_1:76578420-76578439 None:intergenic 45.0%
GCCATCACGCTGTACTAATT+AGG - chr1_1:76578906-76578925 None:intergenic 45.0%
ATCAAGTGCAACCTTGATGC+AGG - chr1_1:76579054-76579073 None:intergenic 45.0%
TGCGGAATTCCTCTGTCAAA+CGG - chr1_1:76579109-76579128 None:intergenic 45.0%
GCAGCGGATCTGTGATTTAT+CGG - chr1_1:76579137-76579156 None:intergenic 45.0%
GATAAATCACAGATCCGCTG+CGG + chr1_1:76579136-76579155 Msa0044920:CDS 45.0%
! GTACGGCAATTTTCTTCACC+TGG - chr1_1:76579765-76579784 None:intergenic 45.0%
CGTACATGCTATGCTTGATG+TGG + chr1_1:76579780-76579799 Msa0044920:CDS 45.0%
ATTCAATCTCTCTCTCCCTC+TGG - chr1_1:76580071-76580090 None:intergenic 45.0%
! CATGTTAACGGTGTCAATCC+AGG - chr1_1:76580808-76580827 None:intergenic 45.0%
GATCTTTAACGAGAAGCAGC+TGG - chr1_1:76580848-76580867 None:intergenic 45.0%
TACTAGGGTCAACTCGCATT+CGG - chr1_1:76581873-76581892 None:intergenic 45.0%
ATTAAGGAAACACGCGACTC+TGG + chr1_1:76581964-76581983 Msa0044920:intron 45.0%
TTAAGGAAACACGCGACTCT+GGG + chr1_1:76581965-76581984 Msa0044920:intron 45.0%
ACAAACCGGAAGGTTCTACT+AGG - chr1_1:76581998-76582017 None:intergenic 45.0%
GGGTAGACCTACAGAAACAT+TGG + chr1_1:76582117-76582136 Msa0044920:intron 45.0%
CACAGTAATCCTTACGTGTG+AGG - chr1_1:76582215-76582234 None:intergenic 45.0%
AGGTATCTCCCTCCAATGTT+CGG - chr1_1:76582254-76582273 None:intergenic 45.0%
CAGGATGATCCTTACATGTG+GGG - chr1_1:76582298-76582317 None:intergenic 45.0%
CACAGGATGATCCTTACATG+TGG - chr1_1:76582300-76582319 None:intergenic 45.0%
AGGATCATCCTGTGATCAAC+AGG + chr1_1:76582306-76582325 Msa0044920:intron 45.0%
AGACGAAACGACAATCCCTA+TGG + chr1_1:76582588-76582607 Msa0044920:intron 45.0%
CGCCCTATGTAGAATCTCAA+CGG + chr1_1:76582681-76582700 Msa0044920:intron 45.0%
CGCCGTTGAGATTCTACATA+GGG - chr1_1:76582686-76582705 None:intergenic 45.0%
ACGCCGTTGAGATTCTACAT+AGG - chr1_1:76582687-76582706 None:intergenic 45.0%
GTGTACTACAGCTCCCAAAA+TGG + chr1_1:76582908-76582927 Msa0044920:intron 45.0%
AGCTCCCAAAATGGCGAAAA+TGG + chr1_1:76582917-76582936 Msa0044920:intron 45.0%
CAAGGAACGGCAAATAAGAG+AGG - chr1_1:76583010-76583029 None:intergenic 45.0%
CTTATTTGCCGTTCCTTGTC+AGG + chr1_1:76583012-76583031 Msa0044920:CDS 45.0%
! GGAATGGGTTCATCTGGATC+AGG - chr1_1:76572238-76572257 None:intergenic 50.0%
ACACAACCTACGGCCAATGT+TGG + chr1_1:76572277-76572296 Msa0044920:CDS 50.0%
ATCCTCCAACGGTACCGTTT+CGG - chr1_1:76572305-76572324 None:intergenic 50.0%
AGCTGAAACGTCGTCGTTGA+AGG + chr1_1:76572354-76572373 Msa0044920:CDS 50.0%
GTCGAAGGACGATGAAGGTT+CGG + chr1_1:76572474-76572493 Msa0044920:CDS 50.0%
! GACGATGAAGGTTCGGTTGA+AGG + chr1_1:76572481-76572500 Msa0044920:CDS 50.0%
!! AGGGATGCAGAAGCGTTGTT+AGG + chr1_1:76572622-76572641 Msa0044920:CDS 50.0%
!! GGGATGCAGAAGCGTTGTTA+GGG + chr1_1:76572623-76572642 Msa0044920:CDS 50.0%
GGTAAAGATGTGGTAGCTGG+AGG + chr1_1:76572667-76572686 Msa0044920:CDS 50.0%
CAACTGGTGAGAAAGAGACG+CGG + chr1_1:76572703-76572722 Msa0044920:CDS 50.0%
TGAAACCAACAACGAGGAGG+AGG + chr1_1:76573425-76573444 Msa0044920:CDS 50.0%
GATGAGCGTGTGTTCTGGTA+AGG + chr1_1:76573674-76573693 Msa0044920:intron 50.0%
TGGTGTAGATCTACAGCCCT+TGG - chr1_1:76574303-76574322 None:intergenic 50.0%
AGGGCTGTAGATCTACACCA+TGG + chr1_1:76574303-76574322 Msa0044920:CDS 50.0%
! TCAATGGCACTGGAGCAAAG+GGG + chr1_1:76574341-76574360 Msa0044920:CDS 50.0%
AATGCACGCCACATGACTAG+TGG - chr1_1:76574420-76574439 None:intergenic 50.0%
CTCTACAAAACCGCCTTGTG+AGG + chr1_1:76574642-76574661 Msa0044920:intron 50.0%
CTACAAAACCGCCTTGTGAG+GGG + chr1_1:76574644-76574663 Msa0044920:intron 50.0%
ATACATCTCCCCTCACAAGG+CGG - chr1_1:76574655-76574674 None:intergenic 50.0%
GATGGCAATGGGTACCCTAT+GGG + chr1_1:76575123-76575142 Msa0044920:intron 50.0%
CAATGGGTACCCTATGGGTA+GGG + chr1_1:76575128-76575147 Msa0044920:intron 50.0%
CACTGTAGTACCCTACCCAT+AGG - chr1_1:76575141-76575160 None:intergenic 50.0%
ACAAACACGGGTATGGGGAA+GGG - chr1_1:76575164-76575183 None:intergenic 50.0%
TACAAACACGGGTATGGGGA+AGG - chr1_1:76575165-76575184 None:intergenic 50.0%
AGTTGTTGCCCACGAGGATA+CGG - chr1_1:76575208-76575227 None:intergenic 50.0%
CACTAAAGTTGTTGCCCACG+AGG - chr1_1:76575214-76575233 None:intergenic 50.0%
!! AAAGTGCGGGTAATGGATGC+GGG - chr1_1:76575274-76575293 None:intergenic 50.0%
! GCTTTCATGGCTTCGGGTTT+GGG - chr1_1:76575630-76575649 None:intergenic 50.0%
! TGCTTTCATGGCTTCGGGTT+TGG - chr1_1:76575631-76575650 None:intergenic 50.0%
AAACCCGAAGCCATGAAAGC+AGG + chr1_1:76575630-76575649 Msa0044920:intron 50.0%
AACCCGAAGCCATGAAAGCA+GGG + chr1_1:76575631-76575650 Msa0044920:intron 50.0%
AACCCTGCTTTCATGGCTTC+GGG - chr1_1:76575636-76575655 None:intergenic 50.0%
! GGGTTTTACCCTACCCATTG+TGG + chr1_1:76575651-76575670 Msa0044920:intron 50.0%
ACACAAATGGTCGCAGCGAT+TGG + chr1_1:76575949-76575968 Msa0044920:CDS 50.0%
!! GTCGCAGCGATTGGCTTAAA+TGG + chr1_1:76575958-76575977 Msa0044920:CDS 50.0%
!! CGATTGGCTTAAATGGCCTG+AGG + chr1_1:76575965-76575984 Msa0044920:CDS 50.0%
! CAACCTTGCTGTGAAGTTGC+CGG + chr1_1:76576109-76576128 Msa0044920:CDS 50.0%
AATCCGGCAACTTCACAGCA+AGG - chr1_1:76576115-76576134 None:intergenic 50.0%
TATGTTCTTGGCCCCATGTC+AGG - chr1_1:76576149-76576168 None:intergenic 50.0%
GCTCCCTCTTATCTTGCTCA+AGG - chr1_1:76576813-76576832 None:intergenic 50.0%
AAGAGGGAGCTACATGGTGA+TGG + chr1_1:76576823-76576842 Msa0044920:CDS 50.0%
AGAGGGAGCTACATGGTGAT+GGG + chr1_1:76576824-76576843 Msa0044920:CDS 50.0%
GTTGGAGAGGATCCCTTAGA+AGG + chr1_1:76576901-76576920 Msa0044920:CDS 50.0%
!! ATCCCTTAGAAGGTGCTCTC+TGG + chr1_1:76576911-76576930 Msa0044920:CDS 50.0%
!! TCCCTTAGAAGGTGCTCTCT+GGG + chr1_1:76576912-76576931 Msa0044920:CDS 50.0%
!! TCCCAGAGAGCACCTTCTAA+GGG - chr1_1:76576916-76576935 None:intergenic 50.0%
!! ATCCCAGAGAGCACCTTCTA+AGG - chr1_1:76576917-76576936 None:intergenic 50.0%
!!! GATGCCGTTTTCATTCCTGC+TGG + chr1_1:76577671-76577690 Msa0044920:CDS 50.0%
! GGATAATGGTACCGCCTTTC+TGG + chr1_1:76577858-76577877 Msa0044920:intron 50.0%
! AGTATGGTGGGGTTGGAGAT+AGG - chr1_1:76578037-76578056 None:intergenic 50.0%
! GCTATTGAGTATGGTGGGGT+TGG - chr1_1:76578044-76578063 None:intergenic 50.0%
AGCATACGACCTTGAAGCTG+TGG + chr1_1:76578061-76578080 Msa0044920:intron 50.0%
CCGCCACCAATAATCACAAC+CGG - chr1_1:76578191-76578210 None:intergenic 50.0%
CCGGTTGTGATTATTGGTGG+CGG + chr1_1:76578188-76578207 Msa0044920:CDS 50.0%
TGTGATGTCAGCGGCGAATA+GGG - chr1_1:76578350-76578369 None:intergenic 50.0%
TTGTGATGTCAGCGGCGAAT+AGG - chr1_1:76578351-76578370 None:intergenic 50.0%
AGTTTCAGAACCGACGACCA+TGG + chr1_1:76578400-76578419 Msa0044920:CDS 50.0%
TCTGTTGCAGTCCTGCATCA+AGG + chr1_1:76579040-76579059 Msa0044920:intron 50.0%
TGAGTGCTTCCGTTTGACAG+AGG + chr1_1:76579097-76579116 Msa0044920:CDS 50.0%
AACCTCAAACTTGTCCGCAG+CGG - chr1_1:76579153-76579172 None:intergenic 50.0%
TATATATCCTCGCTCACCGG+AGG + chr1_1:76579379-76579398 Msa0044920:intron 50.0%
ATATATCCTCGCTCACCGGA+GGG + chr1_1:76579380-76579399 Msa0044920:intron 50.0%
GATGACTGCTTCTTGGTACC+AGG + chr1_1:76579744-76579763 Msa0044920:intron 50.0%
TTACAGGTCTGGGAAAGCCA+AGG + chr1_1:76580029-76580048 Msa0044920:intron 50.0%
TAAGGAAACACGCGACTCTG+GGG + chr1_1:76581966-76581985 Msa0044920:intron 50.0%
GTGAGGTCTTACCACCTCAA+AGG - chr1_1:76582198-76582217 None:intergenic 50.0%
GTGGTAAGACCTCACACGTA+AGG + chr1_1:76582203-76582222 Msa0044920:intron 50.0%
AGGATTACTGTGTGACCAGC+AGG + chr1_1:76582223-76582242 Msa0044920:intron 50.0%
AGGTGCAACCGAACATTGGA+GGG + chr1_1:76582243-76582262 Msa0044920:intron 50.0%
AAGCTGCACCTGTTGATCAC+AGG - chr1_1:76582317-76582336 None:intergenic 50.0%
TGTGATCAACAGGTGCAGCT+TGG + chr1_1:76582316-76582335 Msa0044920:intron 50.0%
! ATACAAGTGATGGGGCCGTT+GGG - chr1_1:76582364-76582383 None:intergenic 50.0%
! TATACAAGTGATGGGGCCGT+TGG - chr1_1:76582365-76582384 None:intergenic 50.0%
!! AGGGCGTTGATGTGTGGATT+AGG - chr1_1:76582667-76582686 None:intergenic 50.0%
!! CTACATAGGGCGTTGATGTG+TGG - chr1_1:76582673-76582692 None:intergenic 50.0%
AGGGTGCACGAGAAACTCAT+AGG + chr1_1:76582766-76582785 Msa0044920:intron 50.0%
GGGTGCACGAGAAACTCATA+GGG + chr1_1:76582767-76582786 Msa0044920:intron 50.0%
GGGTTCATCTGGATCAGGGA+GGG - chr1_1:76572233-76572252 None:intergenic 55.0%
TGGGTTCATCTGGATCAGGG+AGG - chr1_1:76572234-76572253 None:intergenic 55.0%
TACCGTTTCGGCGCCAACAT+TGG - chr1_1:76572293-76572312 None:intergenic 55.0%
GAAACGGTACCGTTGGAGGA+TGG + chr1_1:76572304-76572323 Msa0044920:CDS 55.0%
GGTGACGTGGCACAAGCTAT+CGG + chr1_1:76572325-76572344 Msa0044920:CDS 55.0%
GTGGCACAAGCTATCGGTGT+TGG + chr1_1:76572331-76572350 Msa0044920:CDS 55.0%
! GGACGATGAACGTGATGACG+TGG + chr1_1:76572375-76572394 Msa0044920:CDS 55.0%
! CGATGAACGTGATGACGTGG+TGG + chr1_1:76572378-76572397 Msa0044920:CDS 55.0%
TCGCTGTCGAAGGACGATGA+AGG + chr1_1:76572469-76572488 Msa0044920:CDS 55.0%
ATCCTCTGCTAAAGCTGCGG+CGG + chr1_1:76572528-76572547 Msa0044920:CDS 55.0%
GCGGCGGCGATAATGAAATG+CGG + chr1_1:76572544-76572563 Msa0044920:CDS 55.0%
GAGACGCGGCAGAAAGAGAA+AGG + chr1_1:76572717-76572736 Msa0044920:CDS 55.0%
ACGCGGCAGAAAGAGAAAGG+CGG + chr1_1:76572720-76572739 Msa0044920:CDS 55.0%
GGCTGAAACCAACAACGAGG+AGG + chr1_1:76573422-76573441 Msa0044920:CDS 55.0%
CTCAACCTCCTCCTCGTTGT+TGG - chr1_1:76573433-76573452 None:intergenic 55.0%
GAAAGAGAAGCCAGGAGACG+AGG + chr1_1:76573525-76573544 Msa0044920:CDS 55.0%
CGCAGCAACAGAGGAGACAA+AGG - chr1_1:76573837-76573856 None:intergenic 55.0%
CACCTAGAAGCTTCCCACCA+CGG - chr1_1:76573864-76573883 None:intergenic 55.0%
GTGAGTGGTCAAGATCTGGG+TGG + chr1_1:76574001-76574020 Msa0044920:CDS 55.0%
GCTGGGAACCACTAGTCATG+TGG + chr1_1:76574409-76574428 Msa0044920:CDS 55.0%
GGATGGCAATGGGTACCCTA+TGG + chr1_1:76575122-76575141 Msa0044920:intron 55.0%
GCAATGGGTACCCTATGGGT+AGG + chr1_1:76575127-76575146 Msa0044920:intron 55.0%
GTTGTTGCCCACGAGGATAC+GGG - chr1_1:76575207-76575226 None:intergenic 55.0%
GGATGCGGGTATGAGCACTA+AGG - chr1_1:76575260-76575279 None:intergenic 55.0%
! TATATGCTGGTTGCGGGGCT+GGG + chr1_1:76575559-76575578 Msa0044920:intron 55.0%
CAGGGATGGCAATTGGAACC+AGG - chr1_1:76575702-76575721 None:intergenic 55.0%
! GAGGGAGCTACATGGTGATG+GGG + chr1_1:76576825-76576844 Msa0044920:CDS 55.0%
TGGTGACCTGATGGTTGGAG+AGG + chr1_1:76576888-76576907 Msa0044920:CDS 55.0%
AGGGATCCTCTCCAACCATC+AGG - chr1_1:76576897-76576916 None:intergenic 55.0%
! ACTTGGTGAGGCAAACCAGC+AGG - chr1_1:76577689-76577708 None:intergenic 55.0%
GGTGAGAGCAAGCCTTGCAA+TGG - chr1_1:76577900-76577919 None:intergenic 55.0%
!! GGTGGCGGTGCTACTTGAAT+TGG + chr1_1:76578203-76578222 Msa0044920:CDS 55.0%
GAACCGACGAATTGCGTCAC+CGG + chr1_1:76578286-76578305 Msa0044920:CDS 55.0%
GTTCCGGTGACGCAATTCGT+CGG - chr1_1:76578292-76578311 None:intergenic 55.0%
CACGACATGGCTGAGTGTTC+CGG - chr1_1:76578308-76578327 None:intergenic 55.0%
ATCCGCTGCGGACAAGTTTG+AGG + chr1_1:76579148-76579167 Msa0044920:CDS 55.0%
ATGCAAGCACACTTGCCCTC+CGG - chr1_1:76579398-76579417 None:intergenic 55.0%
CAATGTTCGGTTGCACCTGC+TGG - chr1_1:76582241-76582260 None:intergenic 55.0%
CAGCAGGTGCAACCGAACAT+TGG + chr1_1:76582239-76582258 Msa0044920:intron 55.0%
CAGGTGCAACCGAACATTGG+AGG + chr1_1:76582242-76582261 Msa0044920:intron 55.0%
! GGCCAATGTTGGCGCCGAAA+CGG + chr1_1:76572288-76572307 Msa0044920:CDS 60.0%
! ACCGTTGGAGGATGGTGACG+TGG + chr1_1:76572312-76572331 Msa0044920:CDS 60.0%
GCCACGTCACCATCCTCCAA+CGG - chr1_1:76572316-76572335 None:intergenic 60.0%
GCATGTTGGCGCCAAAACGG+TGG + chr1_1:76572444-76572463 Msa0044920:CDS 60.0%
! CGACAGCGACACCACCGTTT+TGG - chr1_1:76572458-76572477 None:intergenic 60.0%
!! AACGGTGGTGTCGCTGTCGA+AGG + chr1_1:76572459-76572478 Msa0044920:CDS 60.0%
ACAGCACACAGGGCATGCCT+TGG - chr1_1:76573254-76573273 None:intergenic 60.0%
! CTCCGTGGTGGGAAGCTTCT+AGG + chr1_1:76573859-76573878 Msa0044920:CDS 60.0%
! CGTGGTGGGAAGCTTCTAGG+TGG + chr1_1:76573862-76573881 Msa0044920:CDS 60.0%
GGGTGGCATGCAAATGCCGA+TGG + chr1_1:76574018-76574037 Msa0044920:CDS 60.0%
! GTATATGCTGGTTGCGGGGC+TGG + chr1_1:76575558-76575577 Msa0044920:intron 60.0%
! ATGGCTTCGGGTTTGGGTCC+GGG - chr1_1:76575624-76575643 None:intergenic 60.0%
! CATGGCTTCGGGTTTGGGTC+CGG - chr1_1:76575625-76575644 None:intergenic 60.0%
GCAATTGGAACCAGGCCCGA+TGG - chr1_1:76575694-76575713 None:intergenic 60.0%
!! GGAGCTACATGGTGATGGGG+AGG + chr1_1:76576828-76576847 Msa0044920:CDS 60.0%
!! GCTACATGGTGATGGGGAGG+CGG + chr1_1:76576831-76576850 Msa0044920:CDS 60.0%
! TGCAAGGCTTGCTCTCACCG+TGG + chr1_1:76577901-76577920 Msa0044920:intron 60.0%
GACGTTAGCGCCATGGTCGT+CGG - chr1_1:76578413-76578432 None:intergenic 60.0%
TGCACACATGCATGCTGCCG+AGG - chr1_1:76581131-76581150 None:intergenic 60.0%
TCGGCGCCAACATTGGCCGT+AGG - chr1_1:76572286-76572305 None:intergenic 65.0%
! TGGCGCCGAAACGGTACCGT+TGG + chr1_1:76572297-76572316 Msa0044920:CDS 65.0%
CGCCGAAACGGTACCGTTGG+AGG + chr1_1:76572300-76572319 Msa0044920:CDS 65.0%
CACGGAGCTCGCAGCAACAG+AGG - chr1_1:76573846-76573865 None:intergenic 65.0%
CTCTGTTGCTGCGAGCTCCG+TGG + chr1_1:76573844-76573863 Msa0044920:CDS 65.0%
TGTTGCTGCGAGCTCCGTGG+TGG + chr1_1:76573847-76573866 Msa0044920:CDS 65.0%
GTTGCTGCGAGCTCCGTGGT+GGG + chr1_1:76573848-76573867 Msa0044920:CDS 65.0%
TGCCCAAGCCCGTATCCTCG+TGG + chr1_1:76575196-76575215 Msa0044920:intron 65.0%
GCCCAAGCCCGTATCCTCGT+GGG + chr1_1:76575197-76575216 Msa0044920:intron 65.0%
GCCCACGAGGATACGGGCTT+GGG - chr1_1:76575201-76575220 None:intergenic 65.0%
TGCCCACGAGGATACGGGCT+TGG - chr1_1:76575202-76575221 None:intergenic 65.0%
! TAGCGGGTATCCATCGGGCC+TGG + chr1_1:76575681-76575700 Msa0044920:intron 65.0%
GCGGCGAATAGGGTCCAGAG+TGG - chr1_1:76578340-76578359 None:intergenic 65.0%
! CGCCGCCGCAGCTTTAGCAG+AGG - chr1_1:76572533-76572552 None:intergenic 70.0%
CACTTGCCCTCCGGTGAGCG+AGG - chr1_1:76579389-76579408 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 76572169 76583075 76572169 ID=Msa0044920;Name=Msa0044920
chr1_1 mRNA 76572169 76583075 76572169 ID=Msa0044920-mRNA-1;Parent=Msa0044920;Name=Msa0044920-mRNA-1;_AED=0.40;_eAED=0.42;_QI=0|0.16|0.15|0.84|1|1|13|0|1031
chr1_1 exon 76572169 76572813 76572169 ID=Msa0044920-mRNA-1:exon:26097;Parent=Msa0044920-mRNA-1
chr1_1 exon 76572921 76573013 76572921 ID=Msa0044920-mRNA-1:exon:26098;Parent=Msa0044920-mRNA-1
chr1_1 exon 76573408 76573546 76573408 ID=Msa0044920-mRNA-1:exon:26099;Parent=Msa0044920-mRNA-1
chr1_1 exon 76573627 76573690 76573627 ID=Msa0044920-mRNA-1:exon:26100;Parent=Msa0044920-mRNA-1
chr1_1 exon 76573774 76574512 76573774 ID=Msa0044920-mRNA-1:exon:26101;Parent=Msa0044920-mRNA-1
chr1_1 exon 76575915 76576244 76575915 ID=Msa0044920-mRNA-1:exon:26102;Parent=Msa0044920-mRNA-1
chr1_1 exon 76576730 76577029 76576730 ID=Msa0044920-mRNA-1:exon:26103;Parent=Msa0044920-mRNA-1
chr1_1 exon 76577464 76577536 76577464 ID=Msa0044920-mRNA-1:exon:26104;Parent=Msa0044920-mRNA-1
chr1_1 exon 76577636 76577721 76577636 ID=Msa0044920-mRNA-1:exon:26105;Parent=Msa0044920-mRNA-1
chr1_1 exon 76578160 76578450 76578160 ID=Msa0044920-mRNA-1:exon:26106;Parent=Msa0044920-mRNA-1
chr1_1 exon 76579050 76579169 76579050 ID=Msa0044920-mRNA-1:exon:26107;Parent=Msa0044920-mRNA-1
chr1_1 exon 76579766 76579824 76579766 ID=Msa0044920-mRNA-1:exon:26108;Parent=Msa0044920-mRNA-1
chr1_1 exon 76582919 76583075 76582919 ID=Msa0044920-mRNA-1:exon:26109;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76572169 76572813 76572169 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76572921 76573013 76572921 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76573408 76573546 76573408 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76573627 76573690 76573627 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76573774 76574512 76573774 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76575915 76576244 76575915 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76576730 76577029 76576730 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76577464 76577536 76577464 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76577636 76577721 76577636 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76578160 76578450 76578160 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76579050 76579169 76579050 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76579766 76579824 76579766 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
chr1_1 CDS 76582919 76583075 76582919 ID=Msa0044920-mRNA-1:cds;Parent=Msa0044920-mRNA-1
Gene Sequence

>Msa0044920

ATGGCGGAGGAAGAGAACAACGACATAGTCACATATATTGTGAAAATCAAAGTCACACTCACCCTCCCTGATCCAGATGAACCCATTCCTGATCATGATCATCGAGAAACACAACCTACGGCCAATGTTGGCGCCGAAACGGTACCGTTGGAGGATGGTGACGTGGCACAAGCTATCGGTGTTGGAGCTGAAACGTCGTCGTTGAAGGACGATGAACGTGATGACGTGGTGGAAGCAGCTGAAGAATCTATTCCTGATCGAGAAAAACAAGATATGCATGTTGGCGCCAAAACGGTGGTGTCGCTGTCGAAGGACGATGAAGGTTCGGTTGAAGGTGATAACATTGCAGCTAGGGATTCATCCTCTGCTAAAGCTGCGGCGGCGATAATGAAATGCGGCAGAAAGAAAAAGAAACGTGGAAGAAAGAGTTTTGCAGAAATTGAAAAGATGAAGAGGGATGCAGAAGCGTTGTTAGGGAACAGAATAAAGGAAGAAACTGGTAAAGATGTGGTAGCTGGAGGCTCTTCATCATTTCAACTGGTGAGAAAGAGACGCGGCAGAAAGAGAAAGGCGGAGAAAGAAACCACCAAAAATGAGGTTCCACAAGTCCACAAGAAACTTAAAATCAGCGAGAGTAATGCTAAGGGGTTTCCTCAATGTGCCATCAATGTCAAAGAAATGACAGGGCCAGCGTTGTTAGATGCACAAAATGCAAACGGAAAAGATTTTGCACATCATGAAATGAAGCGTAAGGCTGAAACCAACAACGAGGAGGAGGTTGAGTTCTCTAAGTATCTGCTGAAAGGACTTCTTCCACATTTAAGACGGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAGGAGACGAGGGCTCTCACTCTCAAAGCTAAATATAAAACCGGCGGATTATTCTAAAGATGAGCGTGTGTTCTGTGACAACTGTAAAACATCAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACCTTTGTCTCCTCTGTTGCTGCGAGCTCCGTGGTGGGAAGCTTCTAGGTGGTGCAGATCCAATTAAGCTTGAGTATGATTTTCGAGGTCGCAATTATCTACATGGTGGAAATGAAGAAAAACATGTTAAAGAAAGTGTATCACATGCAGAGGATGAGTCTACGATTCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGCCGATGGTAGCATTCCTTGTCCAAAAGCTGATAATGAATGTGATCATGGTTTCCTTGAACTGAGAAGGATACTTCCTCCAAATTGCATCTCTGAGTTAGTTTGTAAAGCAAACAAACTTGCAGAAACAATCAAGCTTCAAGATGTAGAGGAGACTCGTGATAATAGGTGTTCTTGCTCGAAACCTGTTAGGTACACCGATGATATACACAATAACACAAGGAAGGCAGCTTTTCATGAAGATTCAAGTGACAAATTTTTATACTGTCCAAGGGCTGTAGATCTACACCATGGAGATTTAAAACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGCACATCTGGTTTAAGCTGGGAACCACTAGTCATGTGGCGTGCATTCCGTCAAATAACCAACTCCAAATACGATGTAGTTTTGGATGTGAAGGCAGTTAATTGTTTAGATTGGTGTGAGGGAGATATTAATATCCACCAATTCTTCACTGGGTACACAAATGGTCGCAGCGATTGGCTTAAATGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACTTTTACCTCGTCATCATGCTGAGTTCATATCTTCCTTGCCTTATAAAGAATACACAAATCCTTTTAGTGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTGTAAAGCCTGACATGGGGCCAAGAACATATATTGCTTATGGATTTACTCAAAATCTCGGACGCGGTGATTCTGTGACTAAGCTCCATTGTGATGTGTCTGATGCAGTAAATGTGTTGACTCATATCGCTAAAGTGGAACTAAAACCTGAGGAAATTAGTGTCATTAAGAAATTGACACGTAAGCACCTTGAGCAAGATAAGAGGGAGCTACATGGTGATGGGGAGGCGGTTGATATGTTTCACCAACTCTCTGACACTAATGATGGTGACCTGATGGTTGGAGAGGATCCCTTAGAAGGTGCTCTCTGGGATATTTTTCGGAGAGAAGATGTACCCAAATTGAAAGAATATCTAGAGAAGCATTTCAGAGAGTTCAGACATGTCAATTGCATTCCTTTAAAGCAGGTTATTGACCCCCTTCATGATCAGACCATTTATCTGAATATGGAGCATAAGATGAAACTTAAGAAAGAGTATGGAATTGAGCCTTGGACTTTTATTCAGAAGTTGGGAGATGCCGTTTTCATTCCTGCTGGTTTGCCTCACCAAGTCAGAAATCTGAAGAAGGAACTGCTCGTATTTAACGGGAAATCCGGTTGTGATTATTGGTGGCGGTGCTACTTGAATTGGAACGTAAGCCATCAGAAATTGGTGAATTACAAACGGTTTCCAACCAATTCCTCAGACAATGAACCGACGAATTGCGTCACCGGAACACTCAGCCATGTCGTGATTCATGAACCACTCTGGACCCTATTCGCCGCTGACATCACAATAAACCTCCGACAAGAACTTATTTTCAACAGTTTCAGAACCGACGACCATGGCGCTAACGTCAAATCATCAGCCATGATTTCCTGCATCAAGGTTGCACTTGATTTTGTCTCTCCCGAACATATTGGTGAGTGCTTCCGTTTGACAGAGGAATTCCGCAAGCTTCCGATAAATCACAGATCCGCTGCGGACAAGTTTGAGGTGAAGAAAATTGCCGTACATGCTATGCTTGATGTGGTTGAAAAATTAGAGAAAGCAAGCTCCCAAAATGGCGAAAATGGTGATCTAGGGTTTGATGCTCTTCTTCTTCGTCGGCTCATCGATTCTTCATCTATTCCACAATTTTTTCCTCTCTTATTTGCCGTTCCTTGTCAGGTTACATCTCATATCAAATTTGGTTTTGAATTTCGTTTGTAA
Protein sequence

>Msa0044920

MAEEENNDIVTYIVKIKVTLTLPDPDEPIPDHDHRETQPTANVGAETVPLEDGDVAQAIGVGAETSSLKDDERDDVVEAAEESIPDREKQDMHVGAKTVVSLSKDDEGSVEGDNIAARDSSSAKAAAAIMKCGRKKKKRGRKSFAEIEKMKRDAEALLGNRIKEETGKDVVAGGSSSFQLVRKRRGRKRKAEKETTKNEVPQVHKKLKISESNAKGFPQCAINVKEMTGPALLDAQNANGKDFAHHEMKRKAETNNEEEVEFSKYLLKGLLPHLRRLDEEQMIEKEREARRRGLSLSKLNIKPADYSKDERVFCDNCKTSIFDYHRSCTKCSFDLCLLCCCELRGGKLLGGADPIKLEYDFRGRNYLHGGNEEKHVKESVSHAEDESTIREWSRSGWHANADGSIPCPKADNECDHGFLELRRILPPNCISELVCKANKLAETIKLQDVEETRDNRCSCSKPVRYTDDIHNNTRKAAFHEDSSDKFLYCPRAVDLHHGDLKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQITNSKYDVVLDVKAVNCLDWCEGDINIHQFFTGYTNGRSDWLKWPEVLKLKDWPPSDLFQELLPRHHAEFISSLPYKEYTNPFSGSLNLAVKLPDYCVKPDMGPRTYIAYGFTQNLGRGDSVTKLHCDVSDAVNVLTHIAKVELKPEEISVIKKLTRKHLEQDKRELHGDGEAVDMFHQLSDTNDGDLMVGEDPLEGALWDIFRREDVPKLKEYLEKHFREFRHVNCIPLKQVIDPLHDQTIYLNMEHKMKLKKEYGIEPWTFIQKLGDAVFIPAGLPHQVRNLKKELLVFNGKSGCDYWWRCYLNWNVSHQKLVNYKRFPTNSSDNEPTNCVTGTLSHVVIHEPLWTLFAADITINLRQELIFNSFRTDDHGANVKSSAMISCIKVALDFVSPEHIGECFRLTEEFRKLPINHRSAADKFEVKKIAVHAMLDVVEKLEKASSQNGENGDLGFDALLLRRLIDSSSIPQFFPLLFAVPCQVTSHIKFGFEFRL*