AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0486100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0486100 MtrunA17_Chr1g0211661 87.227 869 69 4 1 827 1 869 0.0 1448
Msa0486100 MtrunA17_Chr1g0211711 73.684 589 141 5 246 823 406 991 0.0 897
Msa0486100 MtrunA17_Chr1g0211711 50.000 162 59 5 42 194 7 155 3.46e-25 113
Msa0486100 MtrunA17_Chr1g0211711 74.603 63 16 0 919 981 990 1052 6.64e-22 102
Msa0486100 MtrunA17_Chr1g0183311 68.730 614 154 4 248 823 209 822 0.0 878
Msa0486100 MtrunA17_Chr1g0183311 75.410 61 15 0 921 981 823 883 1.43e-21 101
Msa0486100 MtrunA17_Chr5g0448301 61.196 719 183 10 79 793 5 631 0.0 806
Msa0486100 MtrunA17_Chr5g0448301 53.293 167 53 6 40 200 2 149 7.01e-30 126
Msa0486100 MtrunA17_Chr5g0426961 68.870 575 171 2 250 823 208 775 0.0 805
Msa0486100 MtrunA17_Chr5g0426961 76.562 64 15 0 919 982 774 837 1.30e-22 104
Msa0486100 MtrunA17_Chr1g0211691 69.871 541 146 7 247 771 406 945 0.0 751
Msa0486100 MtrunA17_Chr1g0211691 63.131 198 65 2 1 194 1 194 4.53e-58 216
Msa0486100 MtrunA17_Chr5g0420361 60.960 625 206 9 229 823 122 738 0.0 748
Msa0486100 MtrunA17_Chr5g0420361 73.171 41 11 0 921 961 739 779 1.43e-11 68.9
Msa0486100 MtrunA17_Chr6g0472441 58.537 615 192 11 242 823 76 660 0.0 702
Msa0486100 MtrunA17_Chr6g0472441 64.151 53 16 1 921 973 661 710 1.27e-11 68.9
Msa0486100 MtrunA17_Chr2g0289121 45.455 572 269 9 258 823 228 762 2.81e-148 462
Msa0486100 MtrunA17_Chr2g0289121 59.649 57 23 0 921 977 763 819 1.55e-12 72.0
Msa0486100 MtrunA17_Chr4g0075261 42.927 615 265 15 253 823 235 807 8.00e-146 457
Msa0486100 MtrunA17_Chr4g0075261 56.140 57 25 0 921 977 808 864 2.58e-12 71.2
Msa0486100 MtrunA17_Chr7g0275771 46.970 462 227 7 265 711 218 676 2.05e-122 397
Msa0486100 MtrunA17_Chr7g0275771 65.591 93 32 0 729 821 773 865 4.32e-33 138
Msa0486100 MtrunA17_Chr7g0275771 50.725 69 34 0 921 989 868 936 1.16e-13 75.9
Msa0486100 MtrunA17_Chr2g0289031 52.819 337 149 3 489 823 8 336 3.73e-108 342
Msa0486100 MtrunA17_Chr2g0289031 56.140 57 25 0 921 977 337 393 1.05e-11 68.2
Msa0486100 MtrunA17_Chr1g0192011 33.715 611 320 10 258 826 339 906 1.08e-107 359
Msa0486100 MtrunA17_Chr1g0147021 45.880 449 205 9 265 707 950 1366 7.62e-105 360
Msa0486100 MtrunA17_Chr1g0147021 69.318 88 27 0 736 823 1551 1638 4.04e-33 139
Msa0486100 MtrunA17_Chr1g0147021 68.085 47 15 0 922 968 1640 1686 1.97e-12 72.0
Msa0486100 MtrunA17_Chr2g0281051 33.868 623 334 14 265 823 289 897 1.87e-91 313
Msa0486100 MtrunA17_Chr4g0048531 35.657 502 231 13 405 823 727 1219 1.22e-78 281
Msa0486100 MtrunA17_Chr4g0048531 30.303 132 89 1 220 348 302 433 1.11e-14 79.3
Msa0486100 MtrunA17_Chr8g0364421 51.953 256 92 3 293 548 5 229 1.14e-74 245
Msa0486100 MtrunA17_Chr7g0231061 58.242 182 71 2 550 728 12 191 7.31e-61 206
Msa0486100 MtrunA17_Chr8g0361381 52.973 185 83 2 487 671 28 208 1.12e-55 192
Msa0486100 MtrunA17_Chr2g0289091 55.634 142 62 1 563 704 23 163 2.03e-43 164
Msa0486100 MtrunA17_Chr2g0289091 64.286 98 33 1 728 823 301 398 4.14e-34 136
Msa0486100 MtrunA17_Chr6g0469821 58.219 146 47 3 1 138 1 140 5.68e-39 141
Msa0486100 MtrunA17_Chr8g0361391 62.500 96 35 1 735 830 50 144 2.25e-35 132
Msa0486100 MtrunA17_Chr8g0340381 54.930 142 41 4 584 721 36 158 9.90e-33 125
Msa0486100 MtrunA17_Chr1g0211671 100.000 59 0 0 921 979 17 75 1.89e-32 122
Msa0486100 MtrunA17_Chr2g0289041 37.342 158 92 4 258 414 53 204 8.73e-28 112
Msa0486100 MtrunA17_Chr1g0211701 77.966 59 13 0 921 979 59 117 4.98e-24 99.8
Msa0486100 MtrunA17_Chr1g0211701 81.818 55 10 0 769 823 4 58 5.27e-24 99.8
Msa0486100 MtrunA17_Chr1g0211681 53.261 92 35 2 55 138 1 92 1.39e-17 79.0
Msa0486100 MtrunA17_Chr2g0289101 36.923 130 76 3 312 440 5 129 9.54e-17 79.0
Msa0486100 MtrunA17_Chr1g0210321 44.545 110 41 6 839 931 73 179 2.00e-15 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0486100 AT1G11950.1 49.378 563 259 10 264 823 272 811 9.50e-169 518
Msa0486100 AT1G11950.1 54.386 57 26 0 921 977 812 868 1.14e-12 72.8
Msa0486100 AT1G11950.3 49.378 563 259 10 264 823 272 811 9.50e-169 518
Msa0486100 AT1G11950.3 54.386 57 26 0 921 977 812 868 1.14e-12 72.8
Msa0486100 AT1G62310.1 48.789 578 276 9 251 823 275 837 9.14e-167 513
Msa0486100 AT1G11950.2 48.644 553 258 10 264 813 272 801 5.75e-162 498
Msa0486100 AT3G07610.1 56.744 430 175 4 395 823 415 834 2.61e-153 482
Msa0486100 AT3G07610.1 46.552 116 62 0 254 369 225 340 6.00e-26 116
Msa0486100 AT3G07610.3 54.120 449 179 5 395 823 415 856 1.65e-145 462
Msa0486100 AT3G07610.3 46.552 116 62 0 254 369 225 340 5.92e-26 116
Msa0486100 AT4G00990.3 45.415 458 225 7 248 699 143 581 1.70e-117 380
Msa0486100 AT4G00990.3 65.517 87 30 0 735 821 684 770 5.34e-30 128
Msa0486100 AT4G00990.2 45.415 458 225 7 248 699 143 581 1.73e-117 380
Msa0486100 AT4G00990.2 65.517 87 30 0 735 821 684 770 5.38e-30 128
Msa0486100 AT4G00990.1 45.415 458 225 7 248 699 143 581 5.89e-117 380
Msa0486100 AT4G00990.1 65.517 87 30 0 735 821 684 770 5.39e-30 128
Msa0486100 AT4G00990.1 56.140 57 25 0 921 977 773 829 1.18e-12 72.8
Msa0486100 AT3G07610.2 57.244 283 114 2 395 677 415 690 1.21e-94 318
Msa0486100 AT3G07610.2 46.552 116 62 0 254 369 225 340 1.22e-25 114
Msa0486100 AT1G09060.4 30.897 602 343 11 258 828 293 852 2.37e-79 279
Msa0486100 AT1G09060.3 30.897 602 343 11 258 828 293 852 2.37e-79 279
Msa0486100 AT1G09060.2 30.897 602 343 11 258 828 279 838 3.27e-79 279
Msa0486100 AT1G09060.1 30.897 602 343 11 258 828 279 838 3.27e-79 279
Msa0486100 AT4G21430.1 34.218 377 209 5 480 823 485 855 6.46e-62 228
Msa0486100 AT3G24230.1 35.366 164 75 7 808 940 67 230 1.73e-11 68.2

Find 246 sgRNAs with CRISPR-Local

Find 762 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAGATATTCTTTCAATT+TGG 0.093161 3_4:-3878655 None:intergenic
GCCGATTCTACCTGCTTTAA+AGG 0.132025 3_4:-3878714 None:intergenic
GCCTCCTTCTGATTTATTTC+AGG 0.172247 3_4:+3877703 Msa0486100:CDS
GTTACATCTCATATCAAATT+TGG 0.177557 3_4:+3884730 Msa0486100:CDS
AAATCATACTCAAGCTTAAT+TGG 0.220679 3_4:-3875588 None:intergenic
ATCCAAAACTACATCGTATT+TGG 0.227892 3_4:-3876153 None:intergenic
GGAAATCCGGTTGTGATTAT+TGG 0.228341 3_4:+3879878 Msa0486100:CDS
AGCTCCCAAAATGGCGAAAA+TGG 0.240614 3_4:+3884613 Msa0486100:intron
CGGTTCATTGTCTGAGGAAT+TGG 0.247802 3_4:-3879965 None:intergenic
TCACATTCATTATCAGCTTT+TGG 0.248622 3_4:-3875750 None:intergenic
GGATTTGTGTATTCTTTATA+AGG 0.268369 3_4:-3877767 None:intergenic
GTCGCAGCGATTGGCTTAAA+TGG 0.273010 3_4:+3877654 Msa0486100:CDS
AGTACATTGCTGACAATTAC+AGG 0.278275 3_4:-3876062 None:intergenic
CCAAGAACATATATTGCTTA+TGG 0.280860 3_4:+3877854 Msa0486100:CDS
ATCCCAGAGAGCACCTTCTA+AGG 0.286251 3_4:-3878610 None:intergenic
TGTCATTTCTTTGACATTGA+TGG 0.286327 3_4:-3874633 None:intergenic
CTCCGTGGTGGGAAGCTTCT+AGG 0.287089 3_4:+3875555 Msa0486100:CDS
TCTAGATATTCTTTCAATTT+GGG 0.290597 3_4:-3878654 None:intergenic
CTCCAAATACGATGTAGTTT+TGG 0.304082 3_4:+3876151 Msa0486100:CDS
ACTAACTCAGAGATGCAATT+TGG 0.317312 3_4:-3875807 None:intergenic
CGACAGCGACACCACCGTTT+TGG 0.322177 3_4:-3874151 None:intergenic
TCAGACCATTTATCTGAATA+TGG 0.327236 3_4:+3879180 Msa0486100:CDS
CCATAAGCAATATATGTTCT+TGG 0.328103 3_4:-3877854 None:intergenic
AATGGCGAAAATGGTGATCT+AGG 0.328223 3_4:+3884622 Msa0486100:CDS
CAACCTTGCTGTGAAGTTGC+CGG 0.339593 3_4:+3877805 Msa0486100:CDS
ATGCTCCATATTCAGATAAA+TGG 0.340188 3_4:-3879185 None:intergenic
CTTATTTGCCGTTCCTTGTC+AGG 0.349234 3_4:+3884708 Msa0486100:CDS
TTGTGATGTCAGCGGCGAAT+AGG 0.356503 3_4:-3880044 None:intergenic
AGGGATGCAGAAGCGTTGTT+AGG 0.362991 3_4:+3874318 Msa0486100:CDS
ATGAAACTTAAGAAAGAGTA+TGG 0.363484 3_4:+3879211 Msa0486100:CDS
GAACGTAAGCCATCAGAAAT+TGG 0.378011 3_4:+3879921 Msa0486100:CDS
ATTCGTGAGTGGTCAAGATC+TGG 0.381498 3_4:+3875693 Msa0486100:CDS
ATCCCTTAGAAGGTGCTCTC+TGG 0.383194 3_4:+3878607 Msa0486100:CDS
GTGTACTACAGCTCCCAAAA+TGG 0.386667 3_4:+3884604 Msa0486100:intron
CACGACATGGCTGAGTGTTC+CGG 0.386914 3_4:-3880001 None:intergenic
TGTGATGTCAGCGGCGAATA+GGG 0.394626 3_4:-3880043 None:intergenic
CTAAAGATGAGCGTGTGTTC+TGG 0.394804 3_4:+3875365 Msa0486100:CDS
CTCAAAGCTAAATATAAAAC+CGG 0.396606 3_4:+3875333 Msa0486100:CDS
CTCAACCTCCTCCTCGTTGT+TGG 0.396999 3_4:-3875126 None:intergenic
GTTCTTGCTCGAAACCTGTT+AGG 0.397008 3_4:+3875898 Msa0486100:CDS
TAGAGGAGACTCGTGATAAT+AGG 0.397753 3_4:+3875874 Msa0486100:CDS
TGATCAGGAATGGGTTCATC+TGG 0.401180 3_4:-3873937 None:intergenic
GGTGGCGGTGCTACTTGAAT+TGG 0.404321 3_4:+3879899 Msa0486100:CDS
ATCCTCCAACGGTACCGTTT+CGG 0.404627 3_4:-3873998 None:intergenic
ATATCATCGGTGTACCTAAC+AGG 0.407455 3_4:-3875912 None:intergenic
AGGCAGTTAATTGTTTAGAT+TGG 0.408112 3_4:+3876180 Msa0486100:CDS
TTCAATGGCACTGGAGCAAA+GGG 0.413215 3_4:+3876036 Msa0486100:CDS
TATGTTCTTGGCCCCATGTC+AGG 0.417723 3_4:-3877842 None:intergenic
AATATCCACCAATTCTTCAC+TGG 0.420686 3_4:+3877620 Msa0486100:CDS
GACGATGAAGGTTCGGTTGA+AGG 0.422097 3_4:+3874177 Msa0486100:CDS
CTCGTATTTAACGGGAAATC+CGG 0.427671 3_4:+3879865 Msa0486100:CDS
AGGTTGAGAGAACCACTAAA+AGG 0.429360 3_4:-3877788 None:intergenic
CAGAAATTGAAAAGATGAAG+AGG 0.429960 3_4:+3874298 Msa0486100:CDS
AAGGAACTGCTCGTATTTAA+CGG 0.432547 3_4:+3879856 Msa0486100:CDS
CGAGGTCGCAATTATCTACA+TGG 0.434006 3_4:+3875612 Msa0486100:CDS
AATGTACTTGAATGCACATC+TGG 0.441844 3_4:+3876077 Msa0486100:CDS
TTTGTCTCTCCCGAACATAT+TGG 0.442105 3_4:+3880770 Msa0486100:CDS
AGGCTCTTCATCATTTCAAC+TGG 0.442693 3_4:+3874383 Msa0486100:CDS
TACTACTAGTCTTACAATCA+TGG 0.444577 3_4:-3880139 None:intergenic
GGAATGGGTTCATCTGGATC+AGG 0.444988 3_4:-3873931 None:intergenic
GCAGCGGATCTGTGATTTAT+CGG 0.450090 3_4:-3880830 None:intergenic
AACAGAATAAAGGAAGAAAC+TGG 0.451192 3_4:+3874342 Msa0486100:CDS
GTTGGAGAGGATCCCTTAGA+AGG 0.451802 3_4:+3878597 Msa0486100:CDS
GAAGCACTCACCAATATGTT+CGG 0.452411 3_4:-3880780 None:intergenic
GAACCGACGAATTGCGTCAC+CGG 0.456111 3_4:+3879982 Msa0486100:CDS
TACCGTTTCGGCGCCAACAT+TGG 0.457827 3_4:-3873986 None:intergenic
TTCTTCACTGGGTACACAAA+TGG 0.460684 3_4:+3877632 Msa0486100:CDS
CGCCGAAACGGTACCGTTGG+AGG 0.461207 3_4:+3873996 Msa0486100:CDS
TCTTCCACATTTAAGACGGT+TGG 0.461419 3_4:+3875175 Msa0486100:CDS
GAAGTATCCTTCTCAGTTCA+AGG 0.464781 3_4:-3875782 None:intergenic
AGCACCTTGAGCAAGATAAG+AGG 0.465265 3_4:+3878502 Msa0486100:CDS
TTAATGACACTAATTTCCTC+AGG 0.465562 3_4:-3878465 None:intergenic
GGCCAATGTTGGCGCCGAAA+CGG 0.467500 3_4:+3873984 Msa0486100:CDS
TTACCTTCAGATTTCTGACT+TGG 0.467821 3_4:-3879399 None:intergenic
AATGCACATCTGGTTTAAGC+TGG 0.467845 3_4:+3876087 Msa0486100:CDS
TTGATGCTCTTCTTCTTCGT+CGG 0.470722 3_4:+3884647 Msa0486100:CDS
TCTTTCAATTTCAACACCTC+AGG 0.472947 3_4:-3877677 None:intergenic
GTTTCTCGATGATCATGATC+AGG 0.474522 3_4:-3873952 None:intergenic
ATTTGGAGTTGGTTATTTGA+CGG 0.476343 3_4:-3876136 None:intergenic
AGGAACTGCTCGTATTTAAC+GGG 0.477452 3_4:+3879857 Msa0486100:CDS
TTGTGTACCCAGTGAAGAAT+TGG 0.478196 3_4:-3877628 None:intergenic
TTAAGTTTCTTGTGGACTTG+TGG 0.479397 3_4:-3874465 None:intergenic
GACTTGTAGGAATTGAGCCT+TGG 0.481982 3_4:+3879323 Msa0486100:intron
ATCCGCTGCGGACAAGTTTG+AGG 0.482235 3_4:+3880844 Msa0486100:CDS
ACACAAATGGTCGCAGCGAT+TGG 0.484713 3_4:+3877645 Msa0486100:CDS
AGCTGAAACGTCGTCGTTGA+AGG 0.484777 3_4:+3874050 Msa0486100:CDS
CGATGATCATGATCAGGAAT+GGG 0.491693 3_4:-3873946 None:intergenic
AGGTGATAACATTGCAGCTA+GGG 0.495234 3_4:+3874197 Msa0486100:CDS
TGTTGAAAATAAGTTCTTGT+CGG 0.496312 3_4:-3880074 None:intergenic
TCGATGATCATGATCAGGAA+TGG 0.497827 3_4:-3873947 None:intergenic
TCCCTTAGAAGGTGCTCTCT+GGG 0.498565 3_4:+3878608 Msa0486100:CDS
ATCAAGTGCAACCTTGATGC+AGG 0.498619 3_4:-3880747 None:intergenic
AGAAATTGGTGAATTACAAA+CGG 0.500398 3_4:+3879935 Msa0486100:CDS
GTTGTTAGGGAACAGAATAA+AGG 0.500566 3_4:+3874332 Msa0486100:CDS
CACATCAAGCATAGCATGTA+CGG 0.501504 3_4:-3881475 None:intergenic
ATCAATGTCAAAGAAATGAC+AGG 0.501804 3_4:+3874635 Msa0486100:CDS
GAGACGCGGCAGAAAGAGAA+AGG 0.502047 3_4:+3874413 Msa0486100:CDS
TGCGGAATTCCTCTGTCAAA+CGG 0.503979 3_4:-3880802 None:intergenic
GTCGAAGGACGATGAAGGTT+CGG 0.505191 3_4:+3874170 Msa0486100:CDS
CCGCCACCAATAATCACAAC+CGG 0.505196 3_4:-3879884 None:intergenic
AGGTGTTGAAATTGAAAGAT+TGG 0.508050 3_4:+3877681 Msa0486100:CDS
AGGGATCCTCTCCAACCATC+AGG 0.508501 3_4:-3878590 None:intergenic
AACTACATCGTATTTGGAGT+TGG 0.509194 3_4:-3876147 None:intergenic
GGGATGCAGAAGCGTTGTTA+GGG 0.509891 3_4:+3874319 Msa0486100:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 3_4:+3876035 Msa0486100:CDS
GTTGACTCATATCGCTAAAG+TGG 0.516636 3_4:+3878434 Msa0486100:CDS
ATGATTTGACGTTAGCGCCA+TGG 0.517379 3_4:-3880113 None:intergenic
ACTGGTAAAGATGTGGTAGC+TGG 0.518953 3_4:+3874360 Msa0486100:CDS
ATGGCGAAAATGGTGATCTA+GGG 0.522076 3_4:+3884623 Msa0486100:CDS
TCAGGCTTTACACAATAATC+CGG 0.522487 3_4:-3877824 None:intergenic
CGCAGCAACAGAGGAGACAA+AGG 0.527535 3_4:-3875530 None:intergenic
AAGCACTCACCAATATGTTC+GGG 0.527844 3_4:-3880779 None:intergenic
GCTGATAATGAATGTGATCA+TGG 0.528933 3_4:+3875756 Msa0486100:CDS
TGTAATTCACCAATTTCTGA+TGG 0.529410 3_4:-3879930 None:intergenic
TCTGTTGCAGTCCTGCATCA+AGG 0.530126 3_4:+3880736 Msa0486100:intron
TGAAGAACAAATGATTGAGA+AGG 0.530667 3_4:+3875199 Msa0486100:CDS
AAGAGGGAGCTACATGGTGA+TGG 0.531116 3_4:+3878519 Msa0486100:CDS
GTTGCTGCGAGCTCCGTGGT+GGG 0.531732 3_4:+3875544 Msa0486100:CDS
GATAAATGGTCTGATCATGA+AGG 0.531871 3_4:-3879171 None:intergenic
AGAGGGAGCTACATGGTGAT+GGG 0.532113 3_4:+3878520 Msa0486100:CDS
ATGGTTTCCTTGAACTGAGA+AGG 0.533086 3_4:+3875775 Msa0486100:CDS
GACGTTAGCGCCATGGTCGT+CGG 0.534128 3_4:-3880106 None:intergenic
AATCCGGTTGTGATTATTGG+TGG 0.534903 3_4:+3879881 Msa0486100:CDS
CAAACCAGCAGGAATGAAAA+CGG 0.534926 3_4:-3879371 None:intergenic
GCTACATGGTGATGGGGAGG+CGG 0.535164 3_4:+3878527 Msa0486100:CDS
TGTGTATTCTTTATAAGGCA+AGG 0.535177 3_4:-3877762 None:intergenic
TATGGATTTACTCAAAATCT+CGG 0.535793 3_4:+3877872 Msa0486100:CDS
TATAGGAATACCTCGTCTCC+TGG 0.539286 3_4:-3875231 None:intergenic
TATGCATGTTGGCGCCAAAA+CGG 0.540397 3_4:+3874137 Msa0486100:CDS
AACGGTGGTGTCGCTGTCGA+AGG 0.540573 3_4:+3874155 Msa0486100:CDS
TGTGTTATTGTGTATATCAT+CGG 0.540704 3_4:-3875925 None:intergenic
TTCGTGAGTGGTCAAGATCT+GGG 0.542666 3_4:+3875694 Msa0486100:CDS
CAATTGCATTCCTTTAAAGC+AGG 0.542700 3_4:+3878704 Msa0486100:CDS
TCGGCGCCAACATTGGCCGT+AGG 0.543112 3_4:-3873979 None:intergenic
GCTCCCTCTTATCTTGCTCA+AGG 0.544578 3_4:-3878506 None:intergenic
ACTTGGTGAGGCAAACCAGC+AGG 0.547834 3_4:-3879382 None:intergenic
GCACCTTGAGCAAGATAAGA+GGG 0.549030 3_4:+3878503 Msa0486100:CDS
TTAGATGCACAAAATGCAAA+CGG 0.550175 3_4:+3874668 Msa0486100:CDS
TCCCAGAGAGCACCTTCTAA+GGG 0.550365 3_4:-3878609 None:intergenic
TCATCCAACCGTCTTAAATG+TGG 0.550657 3_4:-3875179 None:intergenic
AACTCAGAGATGCAATTTGG+AGG 0.551495 3_4:-3875804 None:intergenic
TGGTGTAGATCTACAGCCCT+TGG 0.555022 3_4:-3875996 None:intergenic
TCATTGTCTGAGGAATTGGT+TGG 0.558511 3_4:-3879961 None:intergenic
TTGACATTGATGGCACATTG+AGG 0.559359 3_4:-3874623 None:intergenic
GTGGCACAAGCTATCGGTGT+TGG 0.561909 3_4:+3874027 Msa0486100:CDS
TGTTGCTGCGAGCTCCGTGG+TGG 0.562600 3_4:+3875543 Msa0486100:CDS
ATATCCACCAATTCTTCACT+GGG 0.564592 3_4:+3877621 Msa0486100:CDS
TTCTCTAAGTATCTGCTGAA+AGG 0.564863 3_4:+3875149 Msa0486100:CDS
TTCAGATTTCTGACTTGGTG+AGG 0.565040 3_4:-3879394 None:intergenic
GACTTCTTCCACATTTAAGA+CGG 0.566290 3_4:+3875171 Msa0486100:CDS
AGAAATTGAAAAGATGAAGA+GGG 0.567266 3_4:+3874299 Msa0486100:CDS
TGTACCCAGTGAAGAATTGG+TGG 0.567688 3_4:-3877625 None:intergenic
ATTTGAAATTTCAATGGCGG+AGG 0.570807 3_4:+3873852 None:intergenic
AAGGTGATAACATTGCAGCT+AGG 0.571180 3_4:+3874196 Msa0486100:CDS
ACACAACCTACGGCCAATGT+TGG 0.573109 3_4:+3873973 Msa0486100:CDS
TGAAAATAAGTTCTTGTCGG+AGG 0.576918 3_4:-3880071 None:intergenic
CAAGATAAGAGGGAGCTACA+TGG 0.577423 3_4:+3878513 Msa0486100:CDS
ATGCACATCTGGTTTAAGCT+GGG 0.577804 3_4:+3876088 Msa0486100:CDS
CAACTCTCTGACACTAATGA+TGG 0.579184 3_4:+3878564 Msa0486100:CDS
CGCCGCCGCAGCTTTAGCAG+AGG 0.580166 3_4:-3874226 None:intergenic
CACGGAGCTCGCAGCAACAG+AGG 0.580415 3_4:-3875539 None:intergenic
GGAGCTACATGGTGATGGGG+AGG 0.581361 3_4:+3878524 Msa0486100:CDS
ACTATAGGAAATGAAGCGTA+AGG 0.584966 3_4:+3875097 Msa0486100:intron
GGTGACGTGGCACAAGCTAT+CGG 0.585670 3_4:+3874021 Msa0486100:CDS
ATAAATGGTCTGATCATGAA+GGG 0.587122 3_4:-3879170 None:intergenic
CATCATTAGTGTCAGAGAGT+TGG 0.587536 3_4:-3878563 None:intergenic
AATCAAGCTTCAAGATGTAG+AGG 0.589159 3_4:+3875857 Msa0486100:CDS
TATTGTGTAAAGCCTGACAT+GGG 0.589216 3_4:+3877830 Msa0486100:CDS
TGAAACCAACAACGAGGAGG+AGG 0.589775 3_4:+3875121 Msa0486100:CDS
AGTTCCTGAAATAAATCAGA+AGG 0.590173 3_4:-3877707 None:intergenic
AGATGTAACCTGACAAGGAA+CGG 0.590718 3_4:-3884716 None:intergenic
GAATGGGTTCATCTGGATCA+GGG 0.590909 3_4:-3873930 None:intergenic
CACTAATGATGGTGACCTGA+TGG 0.592137 3_4:+3878575 Msa0486100:CDS
TGGACAAGGAATGCTACCAT+CGG 0.593451 3_4:-3875730 None:intergenic
TCGTGATTCATGAACCACTC+TGG 0.593650 3_4:+3880019 Msa0486100:CDS
TGGCGCCGAAACGGTACCGT+TGG 0.594492 3_4:+3873993 Msa0486100:CDS
AATCAGCGAGAGTAATGCTA+AGG 0.594627 3_4:+3874488 Msa0486100:CDS
GTTCCGGTGACGCAATTCGT+CGG 0.595552 3_4:-3879985 None:intergenic
TTGAGAAGGAAAGAGAAGCC+AGG 0.596035 3_4:+3875213 Msa0486100:CDS
GAAAGAGAAGCCAGGAGACG+AGG 0.596795 3_4:+3875221 Msa0486100:CDS
AATGATGGTGACCTGATGGT+TGG 0.598278 3_4:+3878579 Msa0486100:CDS
AACTTCTGAATAAAAGTCCA+AGG 0.598579 3_4:-3879340 None:intergenic
CCGGTTGTGATTATTGGTGG+CGG 0.600774 3_4:+3879884 Msa0486100:CDS
ATTCGTCGGTTCATTGTCTG+AGG 0.606379 3_4:-3879971 None:intergenic
AGAAAGTGTATCACATGCAG+AGG 0.606509 3_4:+3875659 Msa0486100:CDS
CACCTAGAAGCTTCCCACCA+CGG 0.608942 3_4:-3875557 None:intergenic
TCATCGAGAAACACAACCTA+CGG 0.610549 3_4:+3873963 Msa0486100:CDS
GGGTTCATCTGGATCAGGGA+GGG 0.610921 3_4:-3873926 None:intergenic
TGTGATTTATCGGAAGCTTG+CGG 0.611620 3_4:-3880820 None:intergenic
GGAAGAAACTGGTAAAGATG+TGG 0.613492 3_4:+3874353 Msa0486100:CDS
GAAACGGTACCGTTGGAGGA+TGG 0.613747 3_4:+3874000 Msa0486100:CDS
TTATTGTGTAAAGCCTGACA+TGG 0.616770 3_4:+3877829 Msa0486100:CDS
CTCTGTTGCTGCGAGCTCCG+TGG 0.620459 3_4:+3875540 Msa0486100:CDS
TCGCTGTCGAAGGACGATGA+AGG 0.626327 3_4:+3874165 Msa0486100:CDS
TCCTGAAATAAATCAGAAGG+AGG 0.633909 3_4:-3877704 None:intergenic
ATATGAGATGTAACCTGACA+AGG 0.636211 3_4:-3884721 None:intergenic
TATACACAATAACACAAGGA+AGG 0.636388 3_4:+3875932 Msa0486100:CDS
ATCCTCTGCTAAAGCTGCGG+CGG 0.638471 3_4:+3874224 Msa0486100:CDS
TCACCAAGTCAGAAATCTGA+AGG 0.640211 3_4:+3879396 Msa0486100:CDS
AGTTTCAGAACCGACGACCA+TGG 0.642281 3_4:+3880096 Msa0486100:CDS
CGTACATGCTATGCTTGATG+TGG 0.642539 3_4:+3881476 Msa0486100:CDS
AACCTCAAACTTGTCCGCAG+CGG 0.644100 3_4:-3880846 None:intergenic
AATGCACGCCACATGACTAG+TGG 0.646851 3_4:-3876113 None:intergenic
ACCGTTGGAGGATGGTGACG+TGG 0.648574 3_4:+3874008 Msa0486100:CDS
GGTAAAGATGTGGTAGCTGG+AGG 0.648889 3_4:+3874363 Msa0486100:CDS
GAGGTTTATTGTGATGTCAG+CGG 0.649113 3_4:-3880052 None:intergenic
CAAGGAACGGCAAATAAGAG+AGG 0.650805 3_4:-3884703 None:intergenic
TTCATCCTCTGCTAAAGCTG+CGG 0.652304 3_4:+3874221 Msa0486100:CDS
TCATCTTTAGAATAATCCGC+CGG 0.653440 3_4:-3875352 None:intergenic
GAGGGAGCTACATGGTGATG+GGG 0.656552 3_4:+3878521 Msa0486100:CDS
CGTGGTGGGAAGCTTCTAGG+TGG 0.658159 3_4:+3875558 Msa0486100:CDS
TAATTGTTTAGATTGGTGTG+AGG 0.659042 3_4:+3876187 Msa0486100:CDS
TAAATGGTCTGATCATGAAG+GGG 0.660847 3_4:-3879169 None:intergenic
GCGGCGGCGATAATGAAATG+CGG 0.661761 3_4:+3874240 Msa0486100:CDS
AAAGCTAAATATAAAACCGG+CGG 0.661902 3_4:+3875336 Msa0486100:CDS
TGAGTGCTTCCGTTTGACAG+AGG 0.665002 3_4:+3880793 Msa0486100:CDS
GCCACGTCACCATCCTCCAA+CGG 0.665173 3_4:-3874009 None:intergenic
AATCCGGCAACTTCACAGCA+AGG 0.666731 3_4:-3877808 None:intergenic
TAAAGTGGAACTAAAACCTG+AGG 0.669552 3_4:+3878449 Msa0486100:CDS
CGATTGGCTTAAATGGCCTG+AGG 0.670626 3_4:+3877661 Msa0486100:CDS
GGGTGGCATGCAAATGCCGA+TGG 0.671435 3_4:+3875714 Msa0486100:CDS
GCTGGGAACCACTAGTCATG+TGG 0.677762 3_4:+3876105 Msa0486100:CDS
ATGAGTCTACGATTCGTGAG+TGG 0.678627 3_4:+3875682 Msa0486100:CDS
ACGCGGCAGAAAGAGAAAGG+CGG 0.678843 3_4:+3874416 Msa0486100:CDS
TGGGTTCATCTGGATCAGGG+AGG 0.685323 3_4:-3873927 None:intergenic
TCAATGTCAAAGAAATGACA+GGG 0.687101 3_4:+3874636 Msa0486100:CDS
TTTACTCAAAATCTCGGACG+CGG 0.689301 3_4:+3877878 Msa0486100:CDS
ATGAACTCAGCATGATGACG+AGG 0.692646 3_4:-3877734 None:intergenic
ATTGTGTAAAGCCTGACATG+GGG 0.693819 3_4:+3877831 Msa0486100:CDS
GTGGTTCATGAATCACGACA+TGG 0.695942 3_4:-3880014 None:intergenic
CTGCATCAGACACATCACAA+TGG 0.698372 3_4:-3877919 None:intergenic
GGTCGCAATTATCTACATGG+TGG 0.698999 3_4:+3875615 Msa0486100:CDS
GGCTGAAACCAACAACGAGG+AGG 0.705772 3_4:+3875118 Msa0486100:CDS
TGGTGACCTGATGGTTGGAG+AGG 0.707195 3_4:+3878584 Msa0486100:CDS
ATGATATACACAATAACACA+AGG 0.707929 3_4:+3875928 Msa0486100:CDS
GGACGATGAACGTGATGACG+TGG 0.712626 3_4:+3874071 Msa0486100:CDS
AAATGGTCTGATCATGAAGG+GGG 0.713662 3_4:-3879168 None:intergenic
GCATGTTGGCGCCAAAACGG+TGG 0.714446 3_4:+3874140 Msa0486100:CDS
AGGGCTGTAGATCTACACCA+TGG 0.722496 3_4:+3875999 Msa0486100:CDS
GCGGCGAATAGGGTCCAGAG+TGG 0.740679 3_4:-3880033 None:intergenic
CAACTGGTGAGAAAGAGACG+CGG 0.745058 3_4:+3874399 Msa0486100:CDS
GATAAATCACAGATCCGCTG+CGG 0.750646 3_4:+3880832 Msa0486100:CDS
CGATGAACGTGATGACGTGG+TGG 0.763971 3_4:+3874074 Msa0486100:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 3_4:+3876037 Msa0486100:CDS
GTGAGTGGTCAAGATCTGGG+TGG 0.773278 3_4:+3875697 Msa0486100:CDS
TAAGGCTGAAACCAACAACG+AGG 0.802053 3_4:+3875115 Msa0486100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATAATTTATTTATTTT+TGG - chr3_4:3877218-3877237 None:intergenic 0.0%
!!! TTCATTTTATAATTTGATTT+TGG + chr3_4:3875286-3875305 Msa0486100:intron 10.0%
!!! TCATTTTATAATTTGATTTT+GGG + chr3_4:3875287-3875306 Msa0486100:intron 10.0%
!!! AACATATTTATTTTTTTAAC+TGG + chr3_4:3876428-3876447 Msa0486100:intron 10.0%
!! ATAATATTCTAATATTATGT+TGG - chr3_4:3881044-3881063 None:intergenic 10.0%
!!! ATAATCTTTACTTATATTTT+TGG + chr3_4:3882733-3882752 Msa0486100:intron 10.0%
!! TCACAATTGAAATAAAATTA+TGG + chr3_4:3877014-3877033 Msa0486100:intron 15.0%
!! TTATATAAATATGTATATGC+TGG + chr3_4:3877242-3877261 Msa0486100:intron 15.0%
!! AAATAAACAGATAAATGAAA+TGG - chr3_4:3878099-3878118 None:intergenic 15.0%
!!! TTTTTTGTAATTTTGCTATA+AGG + chr3_4:3878404-3878423 Msa0486100:intron 15.0%
!! ACTAAAATTTGTATTACAAT+TGG - chr3_4:3879793-3879812 None:intergenic 15.0%
!!! AGATTGTTTAGTATTTTTTA+TGG + chr3_4:3880520-3880539 Msa0486100:intron 15.0%
!! TACAAAATATATCAAAAAGT+TGG - chr3_4:3880546-3880565 None:intergenic 15.0%
!!! ATATATTTTGTAACTTTACA+AGG + chr3_4:3880554-3880573 Msa0486100:intron 15.0%
!!! TTTTACTTTTCCTATATATA+AGG + chr3_4:3880894-3880913 Msa0486100:intron 15.0%
!! ATGAAAATAACTAAGTAATA+TGG + chr3_4:3880957-3880976 Msa0486100:intron 15.0%
!!! AATATTTTAGTTTATCTCAT+AGG - chr3_4:3881021-3881040 None:intergenic 15.0%
!! AACATTGGATAAAAATAAAA+AGG + chr3_4:3882282-3882301 Msa0486100:intron 15.0%
!! ATTACTTTGTAAACTAATTA+AGG - chr3_4:3882981-3883000 None:intergenic 15.0%
!!! ATATGTAACTAAATCTTTTT+AGG + chr3_4:3883282-3883301 Msa0486100:intron 15.0%
!! TTAGGAATAATTTATTTCAA+AGG + chr3_4:3883404-3883423 Msa0486100:intron 15.0%
!! AATATCCAACATAATAAATA+GGG + chr3_4:3884120-3884139 Msa0486100:intron 15.0%
!! AATAAAATACAAGAGTTAAA+AGG - chr3_4:3884233-3884252 None:intergenic 15.0%
!!! TCAGATTTTATAATTTGAAT+AGG + chr3_4:3884442-3884461 Msa0486100:intron 15.0%
!!! CAGATTTTATAATTTGAATA+GGG + chr3_4:3884443-3884462 Msa0486100:intron 15.0%
!!! TTAATTTTTTTGTCTCATTT+TGG + chr3_4:3884565-3884584 Msa0486100:intron 15.0%
!! TAGATTTCAAATATAGACTA+CGG - chr3_4:3875065-3875084 None:intergenic 20.0%
!!! ATATTTGAAATCTATCCATT+TGG + chr3_4:3875071-3875090 Msa0486100:intron 20.0%
!!! GAGATTTAAAACATTTTCAA+TGG + chr3_4:3876021-3876040 Msa0486100:CDS 20.0%
!!! AATCCAAATTTTAAGAATGT+CGG - chr3_4:3876305-3876324 None:intergenic 20.0%
!! TCATTTATAAACATAGTTTG+AGG + chr3_4:3876374-3876393 Msa0486100:intron 20.0%
!! AATAGATAAATTGAATGAAG+AGG - chr3_4:3876770-3876789 None:intergenic 20.0%
!! TCTTCATTCAATTTATCTAT+TGG + chr3_4:3876769-3876788 Msa0486100:intron 20.0%
!! TTTGACTGTTATTATGTATT+AGG + chr3_4:3876796-3876815 Msa0486100:intron 20.0%
!! TTGACTGTTATTATGTATTA+GGG + chr3_4:3876797-3876816 Msa0486100:intron 20.0%
!!! TATTGTATTAGGTAGTTTTT+AGG + chr3_4:3877147-3877166 Msa0486100:intron 20.0%
!! TATTACCTGCAAATTTAAAT+GGG - chr3_4:3877297-3877316 None:intergenic 20.0%
!!! TCAAAACCTTTTTATATTTC+TGG + chr3_4:3877948-3877967 Msa0486100:intron 20.0%
!!! ATTTGTGTTTTTTTTACGAA+AGG + chr3_4:3877996-3878015 Msa0486100:intron 20.0%
!! TCAAATGAAGAAATTATCTA+TGG - chr3_4:3878184-3878203 None:intergenic 20.0%
!!! ATTTGATTTGTTATTTCTCT+TGG + chr3_4:3878198-3878217 Msa0486100:intron 20.0%
!!! ATAAACTGCAAAGTATTTTT+AGG + chr3_4:3878270-3878289 Msa0486100:intron 20.0%
!! CTCATAATAAAATATTCACT+TGG - chr3_4:3878366-3878385 None:intergenic 20.0%
!!! CAAGTGAATATTTTATTATG+AGG + chr3_4:3878364-3878383 Msa0486100:intron 20.0%
!! TCTAGATATTCTTTCAATTT+GGG - chr3_4:3878657-3878676 None:intergenic 20.0%
!! TGTAAACTTCAAATTTGATA+CGG - chr3_4:3879088-3879107 None:intergenic 20.0%
!!! TATCAAATTTGAAGTTTACA+AGG + chr3_4:3879088-3879107 Msa0486100:intron 20.0%
!!! CTTGTAATCTTGTTTTAATT+GGG - chr3_4:3879472-3879491 None:intergenic 20.0%
!!! TCTTGTAATCTTGTTTTAAT+TGG - chr3_4:3879473-3879492 None:intergenic 20.0%
!! TTGTCCAAAATTTATTTACA+TGG + chr3_4:3880340-3880359 Msa0486100:intron 20.0%
!!! TGTACCATGTAAATAAATTT+TGG - chr3_4:3880347-3880366 None:intergenic 20.0%
!! AATTTACTACCTATTCAATA+GGG - chr3_4:3880936-3880955 None:intergenic 20.0%
!! TTCTTTATAACAAAACAGAA+AGG + chr3_4:3881841-3881860 Msa0486100:intron 20.0%
!! AATATAATTCACCAGAATAT+AGG - chr3_4:3882176-3882195 None:intergenic 20.0%
!! TATATTCTGGTGAATTATAT+TGG + chr3_4:3882175-3882194 Msa0486100:intron 20.0%
!! TAGTTATATCTTTCATTTGA+AGG + chr3_4:3882257-3882276 Msa0486100:intron 20.0%
!!! AATCAAACATGATTTGTTTT+TGG - chr3_4:3882388-3882407 None:intergenic 20.0%
!!! AAACAAATCATGTTTGATTT+AGG + chr3_4:3882389-3882408 Msa0486100:intron 20.0%
!! TTGTAAACTAATTAAGGAAT+TGG - chr3_4:3882975-3882994 None:intergenic 20.0%
!! TAACTCTAGATTATATACTT+AGG + chr3_4:3883431-3883450 Msa0486100:intron 20.0%
!! GAATATCCAACATAATAAAT+AGG + chr3_4:3884119-3884138 Msa0486100:intron 20.0%
!! ATATCCAACATAATAAATAG+GGG + chr3_4:3884121-3884140 Msa0486100:intron 20.0%
! AGAAATTGAAAAGATGAAGA+GGG + chr3_4:3874299-3874318 Msa0486100:CDS 25.0%
! TCTGCTCATTTATATATGTT+TGG + chr3_4:3874531-3874550 Msa0486100:intron 25.0%
! CTGCTCATTTATATATGTTT+GGG + chr3_4:3874532-3874551 Msa0486100:intron 25.0%
!! CATTTATATATGTTTGGGTT+TGG + chr3_4:3874537-3874556 Msa0486100:intron 25.0%
!!! TTAATCAACAGTGTTTTGAA+GGG + chr3_4:3874596-3874615 Msa0486100:intron 25.0%
! ACAAAGTAAAACAGAAGTTA+AGG - chr3_4:3874735-3874754 None:intergenic 25.0%
!!! AATATGCCTTGTTTGATAAT+TGG + chr3_4:3874802-3874821 Msa0486100:intron 25.0%
!!! ATATGCCTTGTTTGATAATT+GGG + chr3_4:3874803-3874822 Msa0486100:intron 25.0%
! TGTAATATGTGCAATAACTT+CGG - chr3_4:3874836-3874855 None:intergenic 25.0%
! TATTGCACATATTACATGTT+TGG + chr3_4:3874840-3874859 Msa0486100:intron 25.0%
!! CATATTACATGTTTGGATTT+TGG + chr3_4:3874847-3874866 Msa0486100:intron 25.0%
! ATATCACTCTCTTTCAATTT+AGG - chr3_4:3874925-3874944 None:intergenic 25.0%
! ATTTCCTATAGTAAACCAAA+TGG - chr3_4:3875089-3875108 None:intergenic 25.0%
! CTCAAAGCTAAATATAAAAC+CGG + chr3_4:3875333-3875352 Msa0486100:CDS 25.0%
! AAATCATACTCAAGCTTAAT+TGG - chr3_4:3875591-3875610 None:intergenic 25.0%
!! TGTGTTATTGTGTATATCAT+CGG - chr3_4:3875928-3875947 None:intergenic 25.0%
! ATGATATACACAATAACACA+AGG + chr3_4:3875928-3875947 Msa0486100:CDS 25.0%
!! ACAAATTTTTATACTGTCCA+AGG + chr3_4:3875979-3875998 Msa0486100:CDS 25.0%
!! CAAATTTTTATACTGTCCAA+GGG + chr3_4:3875980-3875999 Msa0486100:CDS 25.0%
!!! GAAAATGTTTTAAATCTCCA+TGG - chr3_4:3876019-3876038 None:intergenic 25.0%
! TAACCGACATTCTTAAAATT+TGG + chr3_4:3876299-3876318 Msa0486100:intron 25.0%
! TACTGTTGAAATACAACATT+AGG + chr3_4:3876509-3876528 Msa0486100:intron 25.0%
! ACTGTTGAAATACAACATTA+GGG + chr3_4:3876510-3876529 Msa0486100:intron 25.0%
!! TATCTAAATTTCTTGCTATC+TGG + chr3_4:3876692-3876711 Msa0486100:intron 25.0%
! ATGTGATGCAAAAACAAATT+GGG - chr3_4:3876721-3876740 None:intergenic 25.0%
! TATGTGATGCAAAAACAAAT+TGG - chr3_4:3876722-3876741 None:intergenic 25.0%
!!! ACGAGTATTTTTTACAAACA+CGG - chr3_4:3876873-3876892 None:intergenic 25.0%
!!! ACAATTTTTGAAGGATGTTT+TGG - chr3_4:3877106-3877125 None:intergenic 25.0%
!! TGTTGGTATACAATTTTTGA+AGG - chr3_4:3877115-3877134 None:intergenic 25.0%
! AAAAATTGTATACCAACAGA+GGG + chr3_4:3877117-3877136 Msa0486100:intron 25.0%
! GTATTACCTGCAAATTTAAA+TGG - chr3_4:3877298-3877317 None:intergenic 25.0%
! GGATTTGTGTATTCTTTATA+AGG - chr3_4:3877770-3877789 None:intergenic 25.0%
! TATGGATTTACTCAAAATCT+CGG + chr3_4:3877872-3877891 Msa0486100:CDS 25.0%
! AACATGCCAGAAATATAAAA+AGG - chr3_4:3877957-3877976 None:intergenic 25.0%
!! TAAAGAAGTGCATAATTTGT+AGG + chr3_4:3878049-3878068 Msa0486100:intron 25.0%
! CTCTAGATATTCTTTCAATT+TGG - chr3_4:3878658-3878677 None:intergenic 25.0%
! TCCAAAAGTTACAAAAAACA+GGG - chr3_4:3878823-3878842 None:intergenic 25.0%
!!! TGTTTTTTGTAACTTTTGGA+GGG + chr3_4:3878823-3878842 Msa0486100:intron 25.0%
! TGTGTATTTGAATCTTAACT+CGG - chr3_4:3878884-3878903 None:intergenic 25.0%
! AACATAATATAAAGTCTGAC+TGG + chr3_4:3878925-3878944 Msa0486100:intron 25.0%
!!! CTGACTGGTTTATTAATTTA+CGG + chr3_4:3878940-3878959 Msa0486100:intron 25.0%
! ACTGTAATCATAGTAATGAA+AGG - chr3_4:3878967-3878986 None:intergenic 25.0%
! ATTCAAGAAAATAAACAGCA+AGG - chr3_4:3879118-3879137 None:intergenic 25.0%
! ATGAAACTTAAGAAAGAGTA+TGG + chr3_4:3879211-3879230 Msa0486100:CDS 25.0%
!!! GACTAGTTTGATCATTTAAA+TGG + chr3_4:3879274-3879293 Msa0486100:intron 25.0%
! AGAAATTGGTGAATTACAAA+CGG + chr3_4:3879935-3879954 Msa0486100:CDS 25.0%
! TGTTGAAAATAAGTTCTTGT+CGG - chr3_4:3880077-3880096 None:intergenic 25.0%
! ATCTCAAACATTATGAGAAA+AGG + chr3_4:3880163-3880182 Msa0486100:intron 25.0%
! TCTCAAACATTATGAGAAAA+GGG + chr3_4:3880164-3880183 Msa0486100:intron 25.0%
! GTTAAAATGTGGTGATTAAA+TGG + chr3_4:3880253-3880272 Msa0486100:intron 25.0%
!! AACGTCTATAAAATTTTGCT+TGG + chr3_4:3880394-3880413 Msa0486100:intron 25.0%
! TACAAGGCTAAAATTGAATT+TGG + chr3_4:3880570-3880589 Msa0486100:intron 25.0%
!! AGTCTTGTATCCTTATATAT+AGG - chr3_4:3880907-3880926 None:intergenic 25.0%
! GAATTTACTACCTATTCAAT+AGG - chr3_4:3880937-3880956 None:intergenic 25.0%
! TCATGTCAACAATTTCTTAT+TGG + chr3_4:3881239-3881258 Msa0486100:intron 25.0%
! CATGTCAACAATTTCTTATT+GGG + chr3_4:3881240-3881259 Msa0486100:intron 25.0%
!!! TTTATGTACTGTTTTTTTCC+TGG + chr3_4:3881265-3881284 Msa0486100:intron 25.0%
! AAGATTTCATACATTCAACA+AGG - chr3_4:3881331-3881350 None:intergenic 25.0%
! TTGTTGAATGTATGAAATCT+TGG + chr3_4:3881330-3881349 Msa0486100:intron 25.0%
! TCATGTCAACAATTTCTTAT+TGG + chr3_4:3881239-3881258 Msa0486100:intron 25.0%
! CATGTCAACAATTTCTTATT+GGG + chr3_4:3881240-3881259 Msa0486100:intron 25.0%
! TTGAAAAATTAGAGAAAGCA+AGG + chr3_4:3881499-3881518 Msa0486100:CDS 25.0%
! ATGATTGCCATTAAATTTAC+AGG + chr3_4:3881709-3881728 Msa0486100:intron 25.0%
! ATTTATTGAGTCACTTGATT+AGG + chr3_4:3881802-3881821 Msa0486100:intron 25.0%
!!! GTTCCATATTTTGTTTTAAC+CGG + chr3_4:3881863-3881882 Msa0486100:intron 25.0%
! TATGTAGTGAACAAAATATC+AGG + chr3_4:3882212-3882231 Msa0486100:intron 25.0%
! TTTCATTTGAAGGAAAACAT+TGG + chr3_4:3882267-3882286 Msa0486100:intron 25.0%
!! ATTTCATATTCCCAGTTTTT+GGG - chr3_4:3882595-3882614 None:intergenic 25.0%
! TTCAAATGACTAGATAAATG+GGG - chr3_4:3882680-3882699 None:intergenic 25.0%
! CTTCAAATGACTAGATAAAT+GGG - chr3_4:3882681-3882700 None:intergenic 25.0%
! ACTTCAAATGACTAGATAAA+TGG - chr3_4:3882682-3882701 None:intergenic 25.0%
!! TTTTCCAATTACATTCACTT+TGG + chr3_4:3883006-3883025 Msa0486100:intron 25.0%
!!! TATATTCTCCTTGTTTTTCT+AGG + chr3_4:3883217-3883236 Msa0486100:intron 25.0%
! AAACATATCCTAGAAAAACA+AGG - chr3_4:3883228-3883247 None:intergenic 25.0%
!!! GTTCGCTAATAAGTTTTATT+AGG + chr3_4:3883386-3883405 Msa0486100:intron 25.0%
! ATGTAACTAGTTAGTGATTA+AGG + chr3_4:3883645-3883664 Msa0486100:intron 25.0%
!!! ATGTCGCGTTTATTTATTTT+AGG - chr3_4:3884089-3884108 None:intergenic 25.0%
! TATCCAACATAATAAATAGG+GGG + chr3_4:3884122-3884141 Msa0486100:intron 25.0%
! CTACTTATCACTTTATTACT+TGG + chr3_4:3884317-3884336 Msa0486100:intron 25.0%
! TTATTACTTGGTAAACGATT+TGG + chr3_4:3884329-3884348 Msa0486100:intron 25.0%
!!! AATGTTTTAACGTCTTTTTG+TGG - chr3_4:3884422-3884441 None:intergenic 25.0%
! TAAATATGTTACAACTTCGA+GGG + chr3_4:3884515-3884534 Msa0486100:intron 25.0%
! AATAAGAGAGGAAAAAATTG+TGG - chr3_4:3884694-3884713 None:intergenic 25.0%
! GTTACATCTCATATCAAATT+TGG + chr3_4:3884730-3884749 Msa0486100:CDS 25.0%
!!! ATATCTTGTTTTTCTCGATC+AGG - chr3_4:3874120-3874139 None:intergenic 30.0%
GAAAAACAAGATATGCATGT+TGG + chr3_4:3874126-3874145 Msa0486100:CDS 30.0%
CAGAAATTGAAAAGATGAAG+AGG + chr3_4:3874298-3874317 Msa0486100:CDS 30.0%
AACAGAATAAAGGAAGAAAC+TGG + chr3_4:3874342-3874361 Msa0486100:CDS 30.0%
!! CTTAATCAACAGTGTTTTGA+AGG + chr3_4:3874595-3874614 Msa0486100:intron 30.0%
!!! TAATCAACAGTGTTTTGAAG+GGG + chr3_4:3874597-3874616 Msa0486100:intron 30.0%
! TGTCATTTCTTTGACATTGA+TGG - chr3_4:3874636-3874655 None:intergenic 30.0%
ATCAATGTCAAAGAAATGAC+AGG + chr3_4:3874635-3874654 Msa0486100:CDS 30.0%
TCAATGTCAAAGAAATGACA+GGG + chr3_4:3874636-3874655 Msa0486100:CDS 30.0%
TTAGATGCACAAAATGCAAA+CGG + chr3_4:3874668-3874687 Msa0486100:CDS 30.0%
GCACATCATGTATACAAAAT+TGG + chr3_4:3874701-3874720 Msa0486100:intron 30.0%
TACATCCCAATTATCAAACA+AGG - chr3_4:3874811-3874830 None:intergenic 30.0%
!!! TTTTTTGTTGCCTTTTGCTA+AGG + chr3_4:3874896-3874915 Msa0486100:intron 30.0%
! ATTTAGGATACCTTAGCAAA+AGG - chr3_4:3874909-3874928 None:intergenic 30.0%
AAGAATAGTTAATCGTGGAA+GGG - chr3_4:3875033-3875052 None:intergenic 30.0%
ATCAGAAGAATAGTTAATCG+TGG - chr3_4:3875038-3875057 None:intergenic 30.0%
! CTATCCATTTGGTTTACTAT+AGG + chr3_4:3875082-3875101 Msa0486100:intron 30.0%
TGAAGAACAAATGATTGAGA+AGG + chr3_4:3875199-3875218 Msa0486100:CDS 30.0%
! CAAATTTTCTCCGACTATAT+AGG - chr3_4:3875251-3875270 None:intergenic 30.0%
!!! ATTTTGGGATGTGAATTACA+GGG + chr3_4:3875302-3875321 Msa0486100:intron 30.0%
AAAGCTAAATATAAAACCGG+CGG + chr3_4:3875336-3875355 Msa0486100:CDS 30.0%
! TCACATTCATTATCAGCTTT+TGG - chr3_4:3875753-3875772 None:intergenic 30.0%
TATACACAATAACACAAGGA+AGG + chr3_4:3875932-3875951 Msa0486100:CDS 30.0%
! TAAAACATTTTCAATGGCAC+TGG + chr3_4:3876027-3876046 Msa0486100:CDS 30.0%
! ATTTGGAGTTGGTTATTTGA+CGG - chr3_4:3876139-3876158 None:intergenic 30.0%
ATCCAAAACTACATCGTATT+TGG - chr3_4:3876156-3876175 None:intergenic 30.0%
AGGCAGTTAATTGTTTAGAT+TGG + chr3_4:3876180-3876199 Msa0486100:CDS 30.0%
TAATTGTTTAGATTGGTGTG+AGG + chr3_4:3876187-3876206 Msa0486100:CDS 30.0%
TGATTTCTCAATCCTTATGA+TGG + chr3_4:3876216-3876235 Msa0486100:intron 30.0%
TTAGAAACAAGTTTCACACA+TGG - chr3_4:3876273-3876292 None:intergenic 30.0%
CAAGATATTGAATGAGAAGT+AGG - chr3_4:3876657-3876676 None:intergenic 30.0%
TGCAATGACAACAATTAATC+TGG - chr3_4:3876746-3876765 None:intergenic 30.0%
CTGTTATTATGTATTAGGGA+TGG + chr3_4:3876801-3876820 Msa0486100:intron 30.0%
!!! TTTTTTACAAACACGGGTAT+GGG - chr3_4:3876866-3876885 None:intergenic 30.0%
!!! ATTTTTTACAAACACGGGTA+TGG - chr3_4:3876867-3876886 None:intergenic 30.0%
!!! CGAGTATTTTTTACAAACAC+GGG - chr3_4:3876872-3876891 None:intergenic 30.0%
TACCTATAGGTTATGAGAAA+GGG - chr3_4:3876933-3876952 None:intergenic 30.0%
! TCTTTTCATAGTTAAAGTGC+GGG - chr3_4:3876983-3877002 None:intergenic 30.0%
! GTCTTTTCATAGTTAAAGTG+CGG - chr3_4:3876984-3877003 None:intergenic 30.0%
CAAAAATTGTATACCAACAG+AGG + chr3_4:3877116-3877135 Msa0486100:intron 30.0%
AAAATTGTATACCAACAGAG+GGG + chr3_4:3877118-3877137 Msa0486100:intron 30.0%
! AAATATGTATATGCTGGTTG+CGG + chr3_4:3877248-3877267 Msa0486100:intron 30.0%
CTGCAAATTTAAATGGGTAA+GGG - chr3_4:3877291-3877310 None:intergenic 30.0%
TTAAATTTGCAGGTAATACC+CGG + chr3_4:3877299-3877318 Msa0486100:intron 30.0%
TGGACAAAGAAAATTCAACA+AGG - chr3_4:3877476-3877495 None:intergenic 30.0%
AGCAACAGAATATCAAGTAA+AGG - chr3_4:3877549-3877568 None:intergenic 30.0%
TTTACTTGATATTCTGTTGC+TGG + chr3_4:3877548-3877567 Msa0486100:intron 30.0%
!! AGGTGTTGAAATTGAAAGAT+TGG + chr3_4:3877681-3877700 Msa0486100:CDS 30.0%
AGTTCCTGAAATAAATCAGA+AGG - chr3_4:3877710-3877729 None:intergenic 30.0%
TGTGTATTCTTTATAAGGCA+AGG - chr3_4:3877765-3877784 None:intergenic 30.0%
! GAATACACAAATCCTTTTAG+TGG + chr3_4:3877776-3877795 Msa0486100:CDS 30.0%
CCATAAGCAATATATGTTCT+TGG - chr3_4:3877857-3877876 None:intergenic 30.0%
CCAAGAACATATATTGCTTA+TGG + chr3_4:3877854-3877873 Msa0486100:CDS 30.0%
! AGTGTTCTTTTTATGACTAG+TGG + chr3_4:3878246-3878265 Msa0486100:intron 30.0%
TTAATGACACTAATTTCCTC+AGG - chr3_4:3878468-3878487 None:intergenic 30.0%
!!! TTTTCCATTATCTAGCTCTA+TGG + chr3_4:3878745-3878764 Msa0486100:intron 30.0%
!!! TCCCTGTTTTTTGTAACTTT+TGG + chr3_4:3878819-3878838 Msa0486100:intron 30.0%
CTCCAAAAGTTACAAAAAAC+AGG - chr3_4:3878824-3878843 None:intergenic 30.0%
!!! CTGTTTTTTGTAACTTTTGG+AGG + chr3_4:3878822-3878841 Msa0486100:intron 30.0%
TTCTTGAATGAGATATCCTT+TGG + chr3_4:3879129-3879148 Msa0486100:intron 30.0%
TCAATAACCTACATTACCAA+AGG - chr3_4:3879148-3879167 None:intergenic 30.0%
ATAAATGGTCTGATCATGAA+GGG - chr3_4:3879173-3879192 None:intergenic 30.0%
TCAGACCATTTATCTGAATA+TGG + chr3_4:3879180-3879199 Msa0486100:CDS 30.0%
ATGCTCCATATTCAGATAAA+TGG - chr3_4:3879188-3879207 None:intergenic 30.0%
ATGTTGAAATGTCAACAAAG+TGG - chr3_4:3879302-3879321 None:intergenic 30.0%
!! ACATTTCAACATTGACTTGT+AGG + chr3_4:3879310-3879329 Msa0486100:intron 30.0%
AACTTCTGAATAAAAGTCCA+AGG - chr3_4:3879343-3879362 None:intergenic 30.0%
! TTGGACTTTTATTCAGAAGT+TGG + chr3_4:3879342-3879361 Msa0486100:CDS 30.0%
! TGGACTTTTATTCAGAAGTT+GGG + chr3_4:3879343-3879362 Msa0486100:CDS 30.0%
AACAGTATCTATGATACTGT+AGG - chr3_4:3879440-3879459 None:intergenic 30.0%
! AAGCTGATGACGTTAAAATT+GGG - chr3_4:3879515-3879534 None:intergenic 30.0%
! AAAGCTGATGACGTTAAAAT+TGG - chr3_4:3879516-3879535 None:intergenic 30.0%
GAGTCACTTAAAAGAAAGAT+TGG - chr3_4:3879669-3879688 None:intergenic 30.0%
!! TTTAGTAGCTTTGATTTGAG+TGG - chr3_4:3879710-3879729 None:intergenic 30.0%
TGTAATTCACCAATTTCTGA+TGG - chr3_4:3879933-3879952 None:intergenic 30.0%
!! TACTACTAGTCTTACAATCA+TGG - chr3_4:3880142-3880161 None:intergenic 30.0%
AACAGAGAGAAAACCAAAAA+CGG + chr3_4:3880218-3880237 Msa0486100:intron 30.0%
AACCAAAAACGGAAATCAAA+CGG + chr3_4:3880229-3880248 Msa0486100:intron 30.0%
! AATCAAACGGTGTTAAAATG+TGG + chr3_4:3880242-3880261 Msa0486100:intron 30.0%
!!! TACGTGTGTCTTGTTTTAAT+TGG + chr3_4:3880276-3880295 Msa0486100:intron 30.0%
!!! ACGTGTGTCTTGTTTTAATT+GGG + chr3_4:3880277-3880296 Msa0486100:intron 30.0%
! TGTGTTTTATCTCTTATCCT+TGG + chr3_4:3880473-3880492 Msa0486100:intron 30.0%
AAAAGTGAGTTTGTGATGTA+TGG - chr3_4:3880649-3880668 None:intergenic 30.0%
TCAAATCAATGAAAGTAGTC+TGG - chr3_4:3880874-3880893 None:intergenic 30.0%
ACTCTTAATCCCTATTGAAT+AGG + chr3_4:3880924-3880943 Msa0486100:intron 30.0%
!! ATCTCATAGGATTAGTTTCT+TGG - chr3_4:3881008-3881027 None:intergenic 30.0%
AAGATTTCATACACTCAACA+AGG - chr3_4:3881176-3881195 None:intergenic 30.0%
CAATAAATTACACTCCCAAA+TGG - chr3_4:3881790-3881809 None:intergenic 30.0%
! TGATTAGGTTTGGTAATCTT+TGG + chr3_4:3881817-3881836 Msa0486100:intron 30.0%
! GATTAGGTTTGGTAATCTTT+GGG + chr3_4:3881818-3881837 Msa0486100:intron 30.0%
! TCATAACTTGTATGTACCTA+TGG + chr3_4:3881934-3881953 Msa0486100:intron 30.0%
!! ATCAGGTTGATTCAAGTATA+TGG + chr3_4:3881965-3881984 Msa0486100:intron 30.0%
!! TCAGGTTGATTCAAGTATAT+GGG + chr3_4:3881966-3881985 Msa0486100:intron 30.0%
! CAGCATGTTTTGTAAAATGT+GGG + chr3_4:3882065-3882084 Msa0486100:intron 30.0%
!!! GTAATGTATGTTTTAGTAGC+AGG - chr3_4:3882108-3882127 None:intergenic 30.0%
GCTACTAAAACATACATTAC+TGG + chr3_4:3882108-3882127 Msa0486100:intron 30.0%
ATTCACCAGAATATAGGATA+GGG - chr3_4:3882170-3882189 None:intergenic 30.0%
AATTCACCAGAATATAGGAT+AGG - chr3_4:3882171-3882190 None:intergenic 30.0%
AACAAAGTTTATCTCGCTAT+AGG - chr3_4:3882310-3882329 None:intergenic 30.0%
TGTCTTGTGATCTAAACATA+GGG - chr3_4:3882353-3882372 None:intergenic 30.0%
TTTACTCTAGTTAATTGTCG+TGG - chr3_4:3882472-3882491 None:intergenic 30.0%
GAAAACATCAGTCATGTTAA+CGG - chr3_4:3882516-3882535 None:intergenic 30.0%
!!! TTGTTTTTTCTCCCAAAAAC+TGG + chr3_4:3882581-3882600 Msa0486100:intron 30.0%
!!! TGTTTTTTCTCCCAAAAACT+GGG + chr3_4:3882582-3882601 Msa0486100:intron 30.0%
! CATTTCATATTCCCAGTTTT+TGG - chr3_4:3882596-3882615 None:intergenic 30.0%
TAAAATGAGCATGAATTTGG+TGG - chr3_4:3882622-3882641 None:intergenic 30.0%
GCATAAAATGAGCATGAATT+TGG - chr3_4:3882625-3882644 None:intergenic 30.0%
! GTTTTTCTTGATGTACACTT+AGG + chr3_4:3882707-3882726 Msa0486100:intron 30.0%
ACAAGAGGATTCAAATCTAA+CGG - chr3_4:3882767-3882786 None:intergenic 30.0%
GTATGATACTAGATAGAAGT+TGG + chr3_4:3882931-3882950 Msa0486100:intron 30.0%
TATAGTGAAAGTTTCTACCT+AGG - chr3_4:3883117-3883136 None:intergenic 30.0%
!!! TCAGTTTTGAACGAGAAATT+AGG - chr3_4:3883152-3883171 None:intergenic 30.0%
TCACTAACTAGTTACATCTT+AGG - chr3_4:3883642-3883661 None:intergenic 30.0%
AAGATATCCAAAGGTAATGA+AGG - chr3_4:3883839-3883858 None:intergenic 30.0%
TTCATTACCTTTGGATATCT+TGG + chr3_4:3883838-3883857 Msa0486100:intron 30.0%
CTCAAAGGTAATTGAAAACA+TGG - chr3_4:3883879-3883898 None:intergenic 30.0%
! CATGTTTTCAATTACCTTTG+AGG + chr3_4:3883877-3883896 Msa0486100:intron 30.0%
TTATACTATCTCAGTTGACT+AGG - chr3_4:3883970-3883989 None:intergenic 30.0%
AGGTATACTATACAAGTGAT+GGG - chr3_4:3884069-3884088 None:intergenic 30.0%
TAGGTATACTATACAAGTGA+TGG - chr3_4:3884070-3884089 None:intergenic 30.0%
! ACATAGAAAGTTGCATGTTT+TGG - chr3_4:3884180-3884199 None:intergenic 30.0%
! TCTTTTTGTGGTTTTTATGG+GGG - chr3_4:3884410-3884429 None:intergenic 30.0%
! GTCTTTTTGTGGTTTTTATG+GGG - chr3_4:3884411-3884430 None:intergenic 30.0%
! CGTCTTTTTGTGGTTTTTAT+GGG - chr3_4:3884412-3884431 None:intergenic 30.0%
! ACGTCTTTTTGTGGTTTTTA+TGG - chr3_4:3884413-3884432 None:intergenic 30.0%
GTAAATATGTTACAACTTCG+AGG + chr3_4:3884514-3884533 Msa0486100:intron 30.0%
GTTGTTAGGGAACAGAATAA+AGG + chr3_4:3874332-3874351 Msa0486100:CDS 35.0%
GAAAGAAACCACCAAAAATG+AGG + chr3_4:3874440-3874459 Msa0486100:CDS 35.0%
TTAAGTTTCTTGTGGACTTG+TGG - chr3_4:3874468-3874487 None:intergenic 35.0%
!!! CGCTGATTTTAAGTTTCTTG+TGG - chr3_4:3874476-3874495 None:intergenic 35.0%
AGAACAAACTGACACAACAT+AGG - chr3_4:3874772-3874791 None:intergenic 35.0%
GAAGAATAGTTAATCGTGGA+AGG - chr3_4:3875034-3875053 None:intergenic 35.0%
ACTATAGGAAATGAAGCGTA+AGG + chr3_4:3875097-3875116 Msa0486100:intron 35.0%
TTCTCTAAGTATCTGCTGAA+AGG + chr3_4:3875149-3875168 Msa0486100:CDS 35.0%
GACTTCTTCCACATTTAAGA+CGG + chr3_4:3875171-3875190 Msa0486100:CDS 35.0%
! ACGAGGTATTCCTATATAGT+CGG + chr3_4:3875238-3875257 Msa0486100:intron 35.0%
!!! GATTTTGGGATGTGAATTAC+AGG + chr3_4:3875301-3875320 Msa0486100:intron 35.0%
!! TCATCTTTAGAATAATCCGC+CGG - chr3_4:3875355-3875374 None:intergenic 35.0%
! AAGCTTGAGTATGATTTTCG+AGG + chr3_4:3875594-3875613 Msa0486100:CDS 35.0%
! TCATTATCAGCTTTTGGACA+AGG - chr3_4:3875747-3875766 None:intergenic 35.0%
! GCTGATAATGAATGTGATCA+TGG + chr3_4:3875756-3875775 Msa0486100:CDS 35.0%
ACTAACTCAGAGATGCAATT+TGG - chr3_4:3875810-3875829 None:intergenic 35.0%
AATCAAGCTTCAAGATGTAG+AGG + chr3_4:3875857-3875876 Msa0486100:CDS 35.0%
AGTACATTGCTGACAATTAC+AGG - chr3_4:3876065-3876084 None:intergenic 35.0%
AATGTACTTGAATGCACATC+TGG + chr3_4:3876077-3876096 Msa0486100:CDS 35.0%
! AACTACATCGTATTTGGAGT+TGG - chr3_4:3876150-3876169 None:intergenic 35.0%
! CTCCAAATACGATGTAGTTT+TGG + chr3_4:3876151-3876170 Msa0486100:CDS 35.0%
TTTCTCAATCCTTATGATGG+AGG + chr3_4:3876219-3876238 Msa0486100:intron 35.0%
! TTCTCAATCCTTATGATGGA+GGG + chr3_4:3876220-3876239 Msa0486100:intron 35.0%
!! CGGTTTTGTAGAGTTAAGTT+AGG - chr3_4:3876331-3876350 None:intergenic 35.0%
GTTTGATAAGAGTTCCACAT+TGG - chr3_4:3876411-3876430 None:intergenic 35.0%
!!! GCCAATTTTTTGAGTGCAAT+TGG + chr3_4:3876553-3876572 Msa0486100:intron 35.0%
GCCAATTGCACTCAAAAAAT+TGG - chr3_4:3876557-3876576 None:intergenic 35.0%
! CAGCGTTTGTTGAAAATGTT+GGG - chr3_4:3876631-3876650 None:intergenic 35.0%
TTATGTATTAGGGATGGCAA+TGG + chr3_4:3876807-3876826 Msa0486100:intron 35.0%
TATGTATTAGGGATGGCAAT+GGG + chr3_4:3876808-3876827 Msa0486100:intron 35.0%
! TTTTTACAAACACGGGTATG+GGG - chr3_4:3876865-3876884 None:intergenic 35.0%
GTACCTATAGGTTATGAGAA+AGG - chr3_4:3876934-3876953 None:intergenic 35.0%
!! AGGGGATTGGTTATTGTATT+AGG + chr3_4:3877136-3877155 Msa0486100:intron 35.0%
! AATATGTATATGCTGGTTGC+GGG + chr3_4:3877249-3877268 Msa0486100:intron 35.0%
CCTGCAAATTTAAATGGGTA+AGG - chr3_4:3877292-3877311 None:intergenic 35.0%
CCTTACCCATTTAAATTTGC+AGG + chr3_4:3877289-3877308 Msa0486100:intron 35.0%
AAAAATACCCACAATGGGTA+GGG - chr3_4:3877358-3877377 None:intergenic 35.0%
TAAAAATACCCACAATGGGT+AGG - chr3_4:3877359-3877378 None:intergenic 35.0%
!!! TATTTTTAGCGGGTATCCAT+CGG + chr3_4:3877371-3877390 Msa0486100:intron 35.0%
TGCAGTAAGTATACGTAACA+GGG - chr3_4:3877416-3877435 None:intergenic 35.0%
ATGCAGTAAGTATACGTAAC+AGG - chr3_4:3877417-3877436 None:intergenic 35.0%
ACTGCATGTTGATGTTAAGT+TGG + chr3_4:3877430-3877449 Msa0486100:intron 35.0%
! TTGAGTTGTTCATTGAATGC+AGG + chr3_4:3877589-3877608 Msa0486100:intron 35.0%
TGAGTTGTTCATTGAATGCA+GGG + chr3_4:3877590-3877609 Msa0486100:intron 35.0%
AATATCCACCAATTCTTCAC+TGG + chr3_4:3877620-3877639 Msa0486100:CDS 35.0%
ATATCCACCAATTCTTCACT+GGG + chr3_4:3877621-3877640 Msa0486100:CDS 35.0%
TCTTTCAATTTCAACACCTC+AGG - chr3_4:3877680-3877699 None:intergenic 35.0%
TCCTGAAATAAATCAGAAGG+AGG - chr3_4:3877707-3877726 None:intergenic 35.0%
TCAGGCTTTACACAATAATC+CGG - chr3_4:3877827-3877846 None:intergenic 35.0%
TTATTGTGTAAAGCCTGACA+TGG + chr3_4:3877829-3877848 Msa0486100:CDS 35.0%
TATTGTGTAAAGCCTGACAT+GGG + chr3_4:3877830-3877849 Msa0486100:CDS 35.0%
GTGCTAACAAAGAATTGATC+AGG - chr3_4:3878320-3878339 None:intergenic 35.0%
TAAAGTGGAACTAAAACCTG+AGG + chr3_4:3878449-3878468 Msa0486100:CDS 35.0%
!! CAATTGCATTCCTTTAAAGC+AGG + chr3_4:3878704-3878723 Msa0486100:CDS 35.0%
!! TCCTTTAAAGCAGGTAGAAT+CGG + chr3_4:3878713-3878732 Msa0486100:intron 35.0%
TTAGCAGCAGAGAAAGTAAA+TGG - chr3_4:3878784-3878803 None:intergenic 35.0%
TTCAAATACACATGCCACAA+AGG + chr3_4:3878892-3878911 Msa0486100:intron 35.0%
TGTTTCAACACAATCCTTTG+TGG - chr3_4:3878909-3878928 None:intergenic 35.0%
AAATGCATTTCCTTTCTCTC+TGG - chr3_4:3879009-3879028 None:intergenic 35.0%
! TGATTCAACCAATGACCTTT+TGG - chr3_4:3879049-3879068 None:intergenic 35.0%
!! GAGATATCCTTTGGTAATGT+AGG + chr3_4:3879138-3879157 Msa0486100:intron 35.0%
TAAATGGTCTGATCATGAAG+GGG - chr3_4:3879172-3879191 None:intergenic 35.0%
GATAAATGGTCTGATCATGA+AGG - chr3_4:3879174-3879193 None:intergenic 35.0%
!! GTTCCTTTGTTGTTTGTAGA+TGG + chr3_4:3879252-3879271 Msa0486100:intron 35.0%
AGTCCATCTACAAACAACAA+AGG - chr3_4:3879258-3879277 None:intergenic 35.0%
TTACCTTCAGATTTCTGACT+TGG - chr3_4:3879402-3879421 None:intergenic 35.0%
! TTTCGTTAGTTTAGTCACAC+AGG + chr3_4:3879533-3879552 Msa0486100:intron 35.0%
AGTTTAGTCACACAGGATAA+TGG + chr3_4:3879540-3879559 Msa0486100:intron 35.0%
AAAGAAAGATTGGAGCTCAT+AGG - chr3_4:3879659-3879678 None:intergenic 35.0%
!! GTGCATTCTTTGTTATTCAC+CGG + chr3_4:3879815-3879834 Msa0486100:intron 35.0%
AAGGAACTGCTCGTATTTAA+CGG + chr3_4:3879856-3879875 Msa0486100:CDS 35.0%
TGAAAATAAGTTCTTGTCGG+AGG - chr3_4:3880074-3880093 None:intergenic 35.0%
CAGCAAAAACAGTACCTATA+TGG + chr3_4:3880302-3880321 Msa0486100:intron 35.0%
TATAGACGTTACACACTTCT+TGG - chr3_4:3880384-3880403 None:intergenic 35.0%
! ATAAAATTTTGCTTGGAGCG+AGG + chr3_4:3880401-3880420 Msa0486100:intron 35.0%
TTTAGAGAATACAAGCACCA+AGG - chr3_4:3880493-3880512 None:intergenic 35.0%
ATGGCTTCAACAATTTGCAT+AGG - chr3_4:3880630-3880649 None:intergenic 35.0%
!! CATAGGATTAGTTTCTTGGT+TGG - chr3_4:3881004-3881023 None:intergenic 35.0%
! TTTTATATATCCTCGCTCAC+CGG + chr3_4:3881072-3881091 Msa0486100:intron 35.0%
TTGACATGATGACATAACAC+GGG - chr3_4:3881228-3881247 None:intergenic 35.0%
GTTGACATGATGACATAACA+CGG - chr3_4:3881229-3881248 None:intergenic 35.0%
! TTTTACTGATGACTGCTTCT+TGG + chr3_4:3881433-3881452 Msa0486100:intron 35.0%
!!! CTTCAGGCGTTTTTTTGTTA+TGG + chr3_4:3881536-3881555 Msa0486100:intron 35.0%
! ACTGTTCACTTTGTTGTCAA+AGG + chr3_4:3881586-3881605 Msa0486100:intron 35.0%
TGCCATTAAATTTACAGGTC+TGG + chr3_4:3881714-3881733 Msa0486100:intron 35.0%
GCCATTAAATTTACAGGTCT+GGG + chr3_4:3881715-3881734 Msa0486100:intron 35.0%
TCCCAGACCTGTAAATTTAA+TGG - chr3_4:3881719-3881738 None:intergenic 35.0%
GTATATTTACGCACAAACCT+TGG - chr3_4:3881745-3881764 None:intergenic 35.0%
TTTGTGCGTAAATATACCAG+AGG + chr3_4:3881748-3881767 Msa0486100:intron 35.0%
TTGTGCGTAAATATACCAGA+GGG + chr3_4:3881749-3881768 Msa0486100:intron 35.0%
AGAGAGAGATTGAATCCATT+TGG + chr3_4:3881772-3881791 Msa0486100:intron 35.0%
GAGAGAGATTGAATCCATTT+GGG + chr3_4:3881773-3881792 Msa0486100:intron 35.0%
TTGAGTCACTTGATTAGGTT+TGG + chr3_4:3881807-3881826 Msa0486100:intron 35.0%
!! GCACCGGTTAAAACAAAATA+TGG - chr3_4:3881869-3881888 None:intergenic 35.0%
! GTATAATGTTTCAAGTGCAC+CGG - chr3_4:3881885-3881904 None:intergenic 35.0%
AAACGTACACCAATACAAGT+CGG - chr3_4:3881909-3881928 None:intergenic 35.0%
TTACAAAACATGCTGCAACA+AGG - chr3_4:3882060-3882079 None:intergenic 35.0%
! GCAGCATGTTTTGTAAAATG+TGG + chr3_4:3882064-3882083 Msa0486100:intron 35.0%
TACTTCCCTATCCTATATTC+TGG + chr3_4:3882162-3882181 Msa0486100:intron 35.0%
GTGTCTTGTGATCTAAACAT+AGG - chr3_4:3882354-3882373 None:intergenic 35.0%
! CATTTTATGCATTTGTCGAG+AGG + chr3_4:3882635-3882654 Msa0486100:intron 35.0%
TCAATCTAACGGTTAAGCAT+TGG - chr3_4:3882863-3882882 None:intergenic 35.0%
AACCGTTAGATTGACATGTT+TGG + chr3_4:3882869-3882888 Msa0486100:intron 35.0%
TGCCAAACATGTCAATCTAA+CGG - chr3_4:3882874-3882893 None:intergenic 35.0%
ACAGCCAAAGTGAATGTAAT+TGG - chr3_4:3883013-3883032 None:intergenic 35.0%
CAAAACTGAAGCAATTCAAG+AGG + chr3_4:3883163-3883182 Msa0486100:intron 35.0%
!! TTCAAGAGGAAGGTATTTCT+AGG + chr3_4:3883177-3883196 Msa0486100:intron 35.0%
CTCCTAAGTACTTACTACTA+GGG - chr3_4:3883585-3883604 None:intergenic 35.0%
! CTCTCTATAGTTCTACAAAC+CGG - chr3_4:3883709-3883728 None:intergenic 35.0%
AGTGTCCTAAGATTCATAGA+TGG + chr3_4:3883792-3883811 Msa0486100:intron 35.0%
GTGTCCTAAGATTCATAGAT+GGG + chr3_4:3883793-3883812 Msa0486100:intron 35.0%
TCTACCCATCTATGAATCTT+AGG - chr3_4:3883800-3883819 None:intergenic 35.0%
!! GTTTTCAATTACCTTTGAGG+TGG + chr3_4:3883880-3883899 Msa0486100:intron 35.0%
TAGTATAAACCCCACATGTA+AGG + chr3_4:3883982-3884001 Msa0486100:intron 35.0%
TGGGACGTTACTAACATAAT+TGG - chr3_4:3884041-3884060 None:intergenic 35.0%
TTATGTTAGTAACGTCCCAA+CGG + chr3_4:3884042-3884061 Msa0486100:intron 35.0%
GGTATACTATACAAGTGATG+GGG - chr3_4:3884068-3884087 None:intergenic 35.0%
CTTCCCCCTATTTATTATGT+TGG - chr3_4:3884128-3884147 None:intergenic 35.0%
GGTTACAGAAAAGTAAGTAG+CGG - chr3_4:3884159-3884178 None:intergenic 35.0%
!! AGTAGAGTATCGTATCCATA+GGG - chr3_4:3884302-3884321 None:intergenic 35.0%
!! AAGTAGAGTATCGTATCCAT+AGG - chr3_4:3884303-3884322 None:intergenic 35.0%
!! ATCACCATTTTCGCCATTTT+GGG - chr3_4:3884620-3884639 None:intergenic 35.0%
ATATGAGATGTAACCTGACA+AGG - chr3_4:3884724-3884743 None:intergenic 35.0%
CGATGATCATGATCAGGAAT+GGG - chr3_4:3873949-3873968 None:intergenic 40.0%
TCGATGATCATGATCAGGAA+TGG - chr3_4:3873950-3873969 None:intergenic 40.0%
GTTTCTCGATGATCATGATC+AGG - chr3_4:3873955-3873974 None:intergenic 40.0%
TCATCGAGAAACACAACCTA+CGG + chr3_4:3873963-3873982 Msa0486100:CDS 40.0%
AAGGTGATAACATTGCAGCT+AGG + chr3_4:3874196-3874215 Msa0486100:CDS 40.0%
AGGTGATAACATTGCAGCTA+GGG + chr3_4:3874197-3874216 Msa0486100:CDS 40.0%
GGCAGAAAGAAAAAGAAACG+TGG + chr3_4:3874261-3874280 Msa0486100:CDS 40.0%
GGAAGAAACTGGTAAAGATG+TGG + chr3_4:3874353-3874372 Msa0486100:CDS 40.0%
AGGCTCTTCATCATTTCAAC+TGG + chr3_4:3874383-3874402 Msa0486100:CDS 40.0%
!! TTGTGGAACCTCATTTTTGG+TGG - chr3_4:3874451-3874470 None:intergenic 40.0%
! GACTTGTGGAACCTCATTTT+TGG - chr3_4:3874454-3874473 None:intergenic 40.0%
AATCAGCGAGAGTAATGCTA+AGG + chr3_4:3874488-3874507 Msa0486100:CDS 40.0%
! GGTGTTATACGCTGTAATTG+TGG + chr3_4:3874558-3874577 Msa0486100:intron 40.0%
! TTGACATTGATGGCACATTG+AGG - chr3_4:3874626-3874645 None:intergenic 40.0%
! TTTTGTGCATCTAACAACGC+TGG - chr3_4:3874662-3874681 None:intergenic 40.0%
GAAAGAGAGTGATATTGCCA+AGG + chr3_4:3874930-3874949 Msa0486100:intron 40.0%
TGCAATTATCACAGCACACA+GGG - chr3_4:3874960-3874979 None:intergenic 40.0%
TTGCAATTATCACAGCACAC+AGG - chr3_4:3874961-3874980 None:intergenic 40.0%
AATAGTTAATCGTGGAAGGG+TGG - chr3_4:3875030-3875049 None:intergenic 40.0%
! TCTTCCACATTTAAGACGGT+TGG + chr3_4:3875175-3875194 Msa0486100:CDS 40.0%
TCATCCAACCGTCTTAAATG+TGG - chr3_4:3875182-3875201 None:intergenic 40.0%
TGTTCTGGTAAGGACTGATT+TGG + chr3_4:3875380-3875399 Msa0486100:intron 40.0%
! AGCATTTTGTACAGCTTCTG+TGG - chr3_4:3875503-3875522 None:intergenic 40.0%
! AGAAAGTGTATCACATGCAG+AGG + chr3_4:3875659-3875678 Msa0486100:CDS 40.0%
ATGGTTTCCTTGAACTGAGA+AGG + chr3_4:3875775-3875794 Msa0486100:CDS 40.0%
! GAAGTATCCTTCTCAGTTCA+AGG - chr3_4:3875785-3875804 None:intergenic 40.0%
AACTCAGAGATGCAATTTGG+AGG - chr3_4:3875807-3875826 None:intergenic 40.0%
TAGAGGAGACTCGTGATAAT+AGG + chr3_4:3875874-3875893 Msa0486100:CDS 40.0%
ATATCATCGGTGTACCTAAC+AGG - chr3_4:3875915-3875934 None:intergenic 40.0%
! AATGCACATCTGGTTTAAGC+TGG + chr3_4:3876087-3876106 Msa0486100:CDS 40.0%
! ATGCACATCTGGTTTAAGCT+GGG + chr3_4:3876088-3876107 Msa0486100:CDS 40.0%
!!! CGATGTAGTTTTGGATGTGA+AGG + chr3_4:3876160-3876179 Msa0486100:CDS 40.0%
! TCTCAATCCTTATGATGGAG+GGG + chr3_4:3876221-3876240 Msa0486100:intron 40.0%
AGGCTATATCTCATCCAATG+TGG + chr3_4:3876394-3876413 Msa0486100:intron 40.0%
!! GCACTCAAAAAATTGGCTTG+AGG - chr3_4:3876550-3876569 None:intergenic 40.0%
! GCAGCGTTTGTTGAAAATGT+TGG - chr3_4:3876632-3876651 None:intergenic 40.0%
TGCCCTTTCTCATAACCTAT+AGG + chr3_4:3876928-3876947 Msa0486100:intron 40.0%
! ATGAGCACTAAGGTACCTAT+AGG - chr3_4:3876946-3876965 None:intergenic 40.0%
CATAGTTAAAGTGCGGGTAA+TGG - chr3_4:3876977-3876996 None:intergenic 40.0%
! ATATGTATATGCTGGTTGCG+GGG + chr3_4:3877250-3877269 Msa0486100:intron 40.0%
CCGCTAAAAATACCCACAAT+GGG - chr3_4:3877363-3877382 None:intergenic 40.0%
!!! CCCATTGTGGGTATTTTTAG+CGG + chr3_4:3877360-3877379 Msa0486100:intron 40.0%
!!! CCATTGTGGGTATTTTTAGC+GGG + chr3_4:3877361-3877380 Msa0486100:intron 40.0%
!!! ATTTTTAGCGGGTATCCATC+GGG + chr3_4:3877372-3877391 Msa0486100:intron 40.0%
GTAAGTATACGTAACAGGGA+TGG - chr3_4:3877412-3877431 None:intergenic 40.0%
TTGTGTACCCAGTGAAGAAT+TGG - chr3_4:3877631-3877650 None:intergenic 40.0%
TTCTTCACTGGGTACACAAA+TGG + chr3_4:3877632-3877651 Msa0486100:CDS 40.0%
GCCTCCTTCTGATTTATTTC+AGG + chr3_4:3877703-3877722 Msa0486100:CDS 40.0%
AGGTTGAGAGAACCACTAAA+AGG - chr3_4:3877791-3877810 None:intergenic 40.0%
ATTGTGTAAAGCCTGACATG+GGG + chr3_4:3877831-3877850 Msa0486100:CDS 40.0%
TTTACTCAAAATCTCGGACG+CGG + chr3_4:3877878-3877897 Msa0486100:CDS 40.0%
! GTTGACTCATATCGCTAAAG+TGG + chr3_4:3878434-3878453 Msa0486100:CDS 40.0%
CATCATTAGTGTCAGAGAGT+TGG - chr3_4:3878566-3878585 None:intergenic 40.0%
CAACTCTCTGACACTAATGA+TGG + chr3_4:3878564-3878583 Msa0486100:CDS 40.0%
!!! GTGCTCTCTGGGATATTTTT+CGG + chr3_4:3878619-3878638 Msa0486100:CDS 40.0%
GCATCCATAGAGCTAGATAA+TGG - chr3_4:3878752-3878771 None:intergenic 40.0%
AGAAAGTAAATGGTCACGAG+GGG - chr3_4:3878774-3878793 None:intergenic 40.0%
GAGAAAGTAAATGGTCACGA+GGG - chr3_4:3878775-3878794 None:intergenic 40.0%
AGAGAAAGTAAATGGTCACG+AGG - chr3_4:3878776-3878795 None:intergenic 40.0%
GATGTAGATACCAGTCCAAA+AGG + chr3_4:3879031-3879050 Msa0486100:intron 40.0%
ATACCAGTCCAAAAGGTCAT+TGG + chr3_4:3879038-3879057 Msa0486100:intron 40.0%
AAATGGTCTGATCATGAAGG+GGG - chr3_4:3879171-3879190 None:intergenic 40.0%
CAAACCAGCAGGAATGAAAA+CGG - chr3_4:3879374-3879393 None:intergenic 40.0%
!! TTCAGATTTCTGACTTGGTG+AGG - chr3_4:3879397-3879416 None:intergenic 40.0%
TCACCAAGTCAGAAATCTGA+AGG + chr3_4:3879396-3879415 Msa0486100:CDS 40.0%
!! CTTATTTCTGTCCAGAAAGG+CGG - chr3_4:3879568-3879587 None:intergenic 40.0%
GCCTTTCTGGACAGAAATAA+GGG + chr3_4:3879567-3879586 Msa0486100:intron 40.0%
!! TCCCTTATTTCTGTCCAGAA+AGG - chr3_4:3879571-3879590 None:intergenic 40.0%
AAATAAGGGATGCCATTGCA+AGG + chr3_4:3879581-3879600 Msa0486100:intron 40.0%
AGTGCTTTATGTGACATCCA+CGG - chr3_4:3879617-3879636 None:intergenic 40.0%
GTATGCTATTGAGTATGGTG+GGG - chr3_4:3879744-3879763 None:intergenic 40.0%
CGTATGCTATTGAGTATGGT+GGG - chr3_4:3879745-3879764 None:intergenic 40.0%
TCGTATGCTATTGAGTATGG+TGG - chr3_4:3879746-3879765 None:intergenic 40.0%
AGGTCGTATGCTATTGAGTA+TGG - chr3_4:3879749-3879768 None:intergenic 40.0%
GTTAGTAAACCACAGCTTCA+AGG - chr3_4:3879769-3879788 None:intergenic 40.0%
TCTGGGAAGTAACACAAAAC+CGG - chr3_4:3879837-3879856 None:intergenic 40.0%
!!! GTTTTGTGTTACTTCCCAGA+AGG + chr3_4:3879837-3879856 Msa0486100:intron 40.0%
AAATACGAGCAGTTCCTTCT+GGG - chr3_4:3879854-3879873 None:intergenic 40.0%
TAAATACGAGCAGTTCCTTC+TGG - chr3_4:3879855-3879874 None:intergenic 40.0%
AGGAACTGCTCGTATTTAAC+GGG + chr3_4:3879857-3879876 Msa0486100:CDS 40.0%
CTCGTATTTAACGGGAAATC+CGG + chr3_4:3879865-3879884 Msa0486100:CDS 40.0%
GGAAATCCGGTTGTGATTAT+TGG + chr3_4:3879878-3879897 Msa0486100:CDS 40.0%
AATCCGGTTGTGATTATTGG+TGG + chr3_4:3879881-3879900 Msa0486100:CDS 40.0%
GAACGTAAGCCATCAGAAAT+TGG + chr3_4:3879921-3879940 Msa0486100:CDS 40.0%
TCATTGTCTGAGGAATTGGT+TGG - chr3_4:3879964-3879983 None:intergenic 40.0%
GAGGTTTATTGTGATGTCAG+CGG - chr3_4:3880055-3880074 None:intergenic 40.0%
AAGAGAATCGACACAGATAG+AGG + chr3_4:3880187-3880206 Msa0486100:intron 40.0%
AGAGAATCGACACAGATAGA+GGG + chr3_4:3880188-3880207 Msa0486100:intron 40.0%
!! CACCGTTTGATTTCCGTTTT+TGG - chr3_4:3880234-3880253 None:intergenic 40.0%
CAGTACCTATATGGTACTGT+AGG + chr3_4:3880311-3880330 Msa0486100:intron 40.0%
ACTTGCCTACAGTACCATAT+AGG - chr3_4:3880319-3880338 None:intergenic 40.0%
TCCTAATTAGTACAGCGTGA+TGG + chr3_4:3880598-3880617 Msa0486100:intron 40.0%
TTTGTCTCTCCCGAACATAT+TGG + chr3_4:3880770-3880789 Msa0486100:CDS 40.0%
AAGCACTCACCAATATGTTC+GGG - chr3_4:3880782-3880801 None:intergenic 40.0%
! GAAGCACTCACCAATATGTT+CGG - chr3_4:3880783-3880802 None:intergenic 40.0%
TGTGATTTATCGGAAGCTTG+CGG - chr3_4:3880823-3880842 None:intergenic 40.0%
GCATAACAGTATTGCTGACA+AGG + chr3_4:3881110-3881129 Msa0486100:intron 40.0%
CGGGAACATAGAACTGAAAT+TGG - chr3_4:3881209-3881228 None:intergenic 40.0%
CAATATTAGAAGCAGACACC+AGG - chr3_4:3881286-3881305 None:intergenic 40.0%
CGGGAACATAGAACTGAAAT+AGG - chr3_4:3881209-3881228 None:intergenic 40.0%
TTGACATGATGACAGAACAC+GGG - chr3_4:3881383-3881402 None:intergenic 40.0%
GTTGACATGATGACAGAACA+CGG - chr3_4:3881384-3881403 None:intergenic 40.0%
CACATCAAGCATAGCATGTA+CGG - chr3_4:3881478-3881497 None:intergenic 40.0%
GGTTAGTGATTGCAAACTTC+AGG + chr3_4:3881520-3881539 Msa0486100:intron 40.0%
!!! GCAGTTTTGTTAGTCTCTCT+AGG + chr3_4:3881643-3881662 Msa0486100:intron 40.0%
!! CATTATACGCCGACTTGTAT+TGG + chr3_4:3881897-3881916 Msa0486100:intron 40.0%
! TACCTATGGTGCTAACTATC+AGG + chr3_4:3881948-3881967 Msa0486100:intron 40.0%
AACCTGATAGTTAGCACCAT+AGG - chr3_4:3881953-3881972 None:intergenic 40.0%
TAGAGTAAATTGCACTCACC+TGG + chr3_4:3882483-3882502 Msa0486100:intron 40.0%
! GCAAAGAAAAGCACAACAAG+AGG - chr3_4:3882782-3882801 None:intergenic 40.0%
!! TGCTCATCATGAGAAGTGTT+TGG + chr3_4:3882799-3882818 Msa0486100:intron 40.0%
!! ATGAGAAGTGTTTGGATCCT+CGG + chr3_4:3882807-3882826 Msa0486100:intron 40.0%
!! ATCTAACGGTTAAGCATTGG+CGG - chr3_4:3882860-3882879 None:intergenic 40.0%
AGATAGAAGTTGGATGCACA+CGG + chr3_4:3882941-3882960 Msa0486100:intron 40.0%
GGTTTGAGCTAAAAGAAGCA+GGG - chr3_4:3883096-3883115 None:intergenic 40.0%
AGGTTTGAGCTAAAAGAAGC+AGG - chr3_4:3883097-3883116 None:intergenic 40.0%
!!! GCTTCTTTTAGCTCAAACCT+AGG + chr3_4:3883097-3883116 Msa0486100:intron 40.0%
ACTGAAGCAATTCAAGAGGA+AGG + chr3_4:3883167-3883186 Msa0486100:intron 40.0%
!! GAAGGTATTTCTAGGAGCTT+TGG + chr3_4:3883185-3883204 Msa0486100:intron 40.0%
GACCCTAGTAGTAAGTACTT+AGG + chr3_4:3883580-3883599 Msa0486100:intron 40.0%
CCTCCTAAGTACTTACTACT+AGG - chr3_4:3883586-3883605 None:intergenic 40.0%
CCTAGTAGTAAGTACTTAGG+AGG + chr3_4:3883583-3883602 Msa0486100:intron 40.0%
GTAAACCTAGTAGAACCTTC+CGG + chr3_4:3883687-3883706 Msa0486100:intron 40.0%
! CTATAGTTCTACAAACCGGA+AGG - chr3_4:3883705-3883724 None:intergenic 40.0%
! ATGAAGGCCAATGTTTCTGT+AGG - chr3_4:3883823-3883842 None:intergenic 40.0%
!! ACATTGGCCTTCATTACCTT+TGG + chr3_4:3883829-3883848 Msa0486100:intron 40.0%
ACAGGATGATCCTTACATGT+GGG - chr3_4:3883995-3884014 None:intergenic 40.0%
CAGAAAAGTAAGTAGCGGTT+AGG - chr3_4:3884154-3884173 None:intergenic 40.0%
! GATCACCATTTTCGCCATTT+TGG - chr3_4:3884621-3884640 None:intergenic 40.0%
AATGGCGAAAATGGTGATCT+AGG + chr3_4:3884622-3884641 Msa0486100:CDS 40.0%
ATGGCGAAAATGGTGATCTA+GGG + chr3_4:3884623-3884642 Msa0486100:CDS 40.0%
TTGATGCTCTTCTTCTTCGT+CGG + chr3_4:3884647-3884666 Msa0486100:CDS 40.0%
AGATGTAACCTGACAAGGAA+CGG - chr3_4:3884719-3884738 None:intergenic 40.0%
! GAATGGGTTCATCTGGATCA+GGG - chr3_4:3873933-3873952 None:intergenic 45.0%
! TGATCAGGAATGGGTTCATC+TGG - chr3_4:3873940-3873959 None:intergenic 45.0%
TATGCATGTTGGCGCCAAAA+CGG + chr3_4:3874137-3874156 Msa0486100:CDS 45.0%
TTCATCCTCTGCTAAAGCTG+CGG + chr3_4:3874221-3874240 Msa0486100:CDS 45.0%
ACTGGTAAAGATGTGGTAGC+TGG + chr3_4:3874360-3874379 Msa0486100:CDS 45.0%
GCAATTGCAAAGCATGCTTG+CGG + chr3_4:3874977-3874996 Msa0486100:intron 45.0%
TAAGGCTGAAACCAACAACG+AGG + chr3_4:3875115-3875134 Msa0486100:CDS 45.0%
TTGAGAAGGAAAGAGAAGCC+AGG + chr3_4:3875213-3875232 Msa0486100:CDS 45.0%
TATAGGAATACCTCGTCTCC+TGG - chr3_4:3875234-3875253 None:intergenic 45.0%
CTAAAGATGAGCGTGTGTTC+TGG + chr3_4:3875365-3875384 Msa0486100:CDS 45.0%
CGAGGTCGCAATTATCTACA+TGG + chr3_4:3875612-3875631 Msa0486100:CDS 45.0%
GGTCGCAATTATCTACATGG+TGG + chr3_4:3875615-3875634 Msa0486100:CDS 45.0%
ATGAGTCTACGATTCGTGAG+TGG + chr3_4:3875682-3875701 Msa0486100:CDS 45.0%
ATTCGTGAGTGGTCAAGATC+TGG + chr3_4:3875693-3875712 Msa0486100:CDS 45.0%
TTCGTGAGTGGTCAAGATCT+GGG + chr3_4:3875694-3875713 Msa0486100:CDS 45.0%
TGGACAAGGAATGCTACCAT+CGG - chr3_4:3875733-3875752 None:intergenic 45.0%
GTTCTTGCTCGAAACCTGTT+AGG + chr3_4:3875898-3875917 Msa0486100:CDS 45.0%
! TTTCAATGGCACTGGAGCAA+AGG + chr3_4:3876035-3876054 Msa0486100:CDS 45.0%
! TTCAATGGCACTGGAGCAAA+GGG + chr3_4:3876036-3876055 Msa0486100:CDS 45.0%
GTAAGAACCCCTCCATCATA+AGG - chr3_4:3876231-3876250 None:intergenic 45.0%
! TATGATGGAGGGGTTCTTAC+AGG + chr3_4:3876231-3876250 Msa0486100:intron 45.0%
TCTACAAAACCGCCTTGTGA+GGG + chr3_4:3876339-3876358 Msa0486100:intron 45.0%
GATATACATCTCCCCTCACA+AGG - chr3_4:3876354-3876373 None:intergenic 45.0%
ACTGTAGTACCCTACCCATA+GGG - chr3_4:3876836-3876855 None:intergenic 45.0%
!! TAAAGTGCGGGTAATGGATG+CGG - chr3_4:3876971-3876990 None:intergenic 45.0%
TGTATACCAACAGAGGGGAT+TGG + chr3_4:3877123-3877142 Msa0486100:intron 45.0%
CAATAACCAATCCCCTCTGT+TGG - chr3_4:3877132-3877151 None:intergenic 45.0%
AAACCCTGCTTTCATGGCTT+CGG - chr3_4:3877333-3877352 None:intergenic 45.0%
AGGGTAAAACCCTGCTTTCA+TGG - chr3_4:3877339-3877358 None:intergenic 45.0%
! GGTTTTACCCTACCCATTGT+GGG + chr3_4:3877348-3877367 Msa0486100:intron 45.0%
CCCGCTAAAAATACCCACAA+TGG - chr3_4:3877364-3877383 None:intergenic 45.0%
TACGTAACAGGGATGGCAAT+TGG - chr3_4:3877405-3877424 None:intergenic 45.0%
AGACTGTTAGGCAGTACAAC+TGG - chr3_4:3877496-3877515 None:intergenic 45.0%
GTTGTACTGCCTAACAGTCT+CGG + chr3_4:3877496-3877515 Msa0486100:intron 45.0%
TTGTACTGCCTAACAGTCTC+GGG + chr3_4:3877497-3877516 Msa0486100:intron 45.0%
ACAATTCACCCGAGACTGTT+AGG - chr3_4:3877508-3877527 None:intergenic 45.0%
TGTACCCAGTGAAGAATTGG+TGG - chr3_4:3877628-3877647 None:intergenic 45.0%
! ATGAACTCAGCATGATGACG+AGG - chr3_4:3877737-3877756 None:intergenic 45.0%
CTGCATCAGACACATCACAA+TGG - chr3_4:3877922-3877941 None:intergenic 45.0%
AGCACCTTGAGCAAGATAAG+AGG + chr3_4:3878502-3878521 Msa0486100:CDS 45.0%
GCACCTTGAGCAAGATAAGA+GGG + chr3_4:3878503-3878522 Msa0486100:CDS 45.0%
CAAGATAAGAGGGAGCTACA+TGG + chr3_4:3878513-3878532 Msa0486100:CDS 45.0%
! CACTAATGATGGTGACCTGA+TGG + chr3_4:3878575-3878594 Msa0486100:CDS 45.0%
! AATGATGGTGACCTGATGGT+TGG + chr3_4:3878579-3878598 Msa0486100:CDS 45.0%
! GCCGATTCTACCTGCTTTAA+AGG - chr3_4:3878717-3878736 None:intergenic 45.0%
!! AACTTTTGGAGGGTTGCACT+AGG + chr3_4:3878833-3878852 Msa0486100:intron 45.0%
TGTTCAGTGACCAGAGAGAA+AGG + chr3_4:3878996-3879015 Msa0486100:intron 45.0%
! CAACCAATGACCTTTTGGAC+TGG - chr3_4:3879044-3879063 None:intergenic 45.0%
GACTTGTAGGAATTGAGCCT+TGG + chr3_4:3879323-3879342 Msa0486100:intron 45.0%
CGCCTTTCTGGACAGAAATA+AGG + chr3_4:3879566-3879585 Msa0486100:intron 45.0%
CGGTTCATTGTCTGAGGAAT+TGG - chr3_4:3879968-3879987 None:intergenic 45.0%
!! ATTCGTCGGTTCATTGTCTG+AGG - chr3_4:3879974-3879993 None:intergenic 45.0%
GTGGTTCATGAATCACGACA+TGG - chr3_4:3880017-3880036 None:intergenic 45.0%
TCGTGATTCATGAACCACTC+TGG + chr3_4:3880019-3880038 Msa0486100:CDS 45.0%
ATGATTTGACGTTAGCGCCA+TGG - chr3_4:3880116-3880135 None:intergenic 45.0%
GCCATCACGCTGTACTAATT+AGG - chr3_4:3880602-3880621 None:intergenic 45.0%
ATCAAGTGCAACCTTGATGC+AGG - chr3_4:3880750-3880769 None:intergenic 45.0%
TGCGGAATTCCTCTGTCAAA+CGG - chr3_4:3880805-3880824 None:intergenic 45.0%
GCAGCGGATCTGTGATTTAT+CGG - chr3_4:3880833-3880852 None:intergenic 45.0%
GATAAATCACAGATCCGCTG+CGG + chr3_4:3880832-3880851 Msa0486100:CDS 45.0%
! GTACGGCAATTTTCTTCACC+TGG - chr3_4:3881461-3881480 None:intergenic 45.0%
CGTACATGCTATGCTTGATG+TGG + chr3_4:3881476-3881495 Msa0486100:CDS 45.0%
ATTCAATCTCTCTCTCCCTC+TGG - chr3_4:3881767-3881786 None:intergenic 45.0%
! CATGTTAACGGTGTCAATCC+AGG - chr3_4:3882504-3882523 None:intergenic 45.0%
GATCTTTAACGAGAAGCAGC+TGG - chr3_4:3882544-3882563 None:intergenic 45.0%
TACTAGGGTCAACTCGCATT+CGG - chr3_4:3883570-3883589 None:intergenic 45.0%
ATTAAGGAAACACGCGACTC+TGG + chr3_4:3883661-3883680 Msa0486100:intron 45.0%
TTAAGGAAACACGCGACTCT+GGG + chr3_4:3883662-3883681 Msa0486100:intron 45.0%
ACAAACCGGAAGGTTCTACT+AGG - chr3_4:3883695-3883714 None:intergenic 45.0%
GGGTAGACCTACAGAAACAT+TGG + chr3_4:3883813-3883832 Msa0486100:intron 45.0%
CACAGTAATCCTTACGTGTG+AGG - chr3_4:3883911-3883930 None:intergenic 45.0%
AGGTATCTCCCTCCAATGTT+CGG - chr3_4:3883950-3883969 None:intergenic 45.0%
CAGGATGATCCTTACATGTG+GGG - chr3_4:3883994-3884013 None:intergenic 45.0%
CACAGGATGATCCTTACATG+TGG - chr3_4:3883996-3884015 None:intergenic 45.0%
AGGATCATCCTGTGATCAAC+AGG + chr3_4:3884002-3884021 Msa0486100:intron 45.0%
AGACGAAACGACAATCCCTA+TGG + chr3_4:3884284-3884303 Msa0486100:intron 45.0%
CGCCCTATGTAGAATCTCAA+CGG + chr3_4:3884377-3884396 Msa0486100:intron 45.0%
CGCCGTTGAGATTCTACATA+GGG - chr3_4:3884382-3884401 None:intergenic 45.0%
ACGCCGTTGAGATTCTACAT+AGG - chr3_4:3884383-3884402 None:intergenic 45.0%
GTGTACTACAGCTCCCAAAA+TGG + chr3_4:3884604-3884623 Msa0486100:intron 45.0%
AGCTCCCAAAATGGCGAAAA+TGG + chr3_4:3884613-3884632 Msa0486100:intron 45.0%
CAAGGAACGGCAAATAAGAG+AGG - chr3_4:3884706-3884725 None:intergenic 45.0%
CTTATTTGCCGTTCCTTGTC+AGG + chr3_4:3884708-3884727 Msa0486100:CDS 45.0%
! GGAATGGGTTCATCTGGATC+AGG - chr3_4:3873934-3873953 None:intergenic 50.0%
ACACAACCTACGGCCAATGT+TGG + chr3_4:3873973-3873992 Msa0486100:CDS 50.0%
ATCCTCCAACGGTACCGTTT+CGG - chr3_4:3874001-3874020 None:intergenic 50.0%
AGCTGAAACGTCGTCGTTGA+AGG + chr3_4:3874050-3874069 Msa0486100:CDS 50.0%
GTCGAAGGACGATGAAGGTT+CGG + chr3_4:3874170-3874189 Msa0486100:CDS 50.0%
! GACGATGAAGGTTCGGTTGA+AGG + chr3_4:3874177-3874196 Msa0486100:CDS 50.0%
!! AGGGATGCAGAAGCGTTGTT+AGG + chr3_4:3874318-3874337 Msa0486100:CDS 50.0%
!! GGGATGCAGAAGCGTTGTTA+GGG + chr3_4:3874319-3874338 Msa0486100:CDS 50.0%
GGTAAAGATGTGGTAGCTGG+AGG + chr3_4:3874363-3874382 Msa0486100:CDS 50.0%
CAACTGGTGAGAAAGAGACG+CGG + chr3_4:3874399-3874418 Msa0486100:CDS 50.0%
TGAAACCAACAACGAGGAGG+AGG + chr3_4:3875121-3875140 Msa0486100:CDS 50.0%
GATGAGCGTGTGTTCTGGTA+AGG + chr3_4:3875370-3875389 Msa0486100:intron 50.0%
TGGTGTAGATCTACAGCCCT+TGG - chr3_4:3875999-3876018 None:intergenic 50.0%
AGGGCTGTAGATCTACACCA+TGG + chr3_4:3875999-3876018 Msa0486100:CDS 50.0%
! TCAATGGCACTGGAGCAAAG+GGG + chr3_4:3876037-3876056 Msa0486100:CDS 50.0%
AATGCACGCCACATGACTAG+TGG - chr3_4:3876116-3876135 None:intergenic 50.0%
CTCTACAAAACCGCCTTGTG+AGG + chr3_4:3876338-3876357 Msa0486100:intron 50.0%
CTACAAAACCGCCTTGTGAG+GGG + chr3_4:3876340-3876359 Msa0486100:intron 50.0%
ATACATCTCCCCTCACAAGG+CGG - chr3_4:3876351-3876370 None:intergenic 50.0%
GATGGCAATGGGTACCCTAT+GGG + chr3_4:3876819-3876838 Msa0486100:intron 50.0%
CAATGGGTACCCTATGGGTA+GGG + chr3_4:3876824-3876843 Msa0486100:intron 50.0%
CACTGTAGTACCCTACCCAT+AGG - chr3_4:3876837-3876856 None:intergenic 50.0%
ACAAACACGGGTATGGGGAA+GGG - chr3_4:3876860-3876879 None:intergenic 50.0%
TACAAACACGGGTATGGGGA+AGG - chr3_4:3876861-3876880 None:intergenic 50.0%
AGTTGTTGCCCACGAGGATA+CGG - chr3_4:3876904-3876923 None:intergenic 50.0%
CACTAAAGTTGTTGCCCACG+AGG - chr3_4:3876910-3876929 None:intergenic 50.0%
!! AAAGTGCGGGTAATGGATGC+GGG - chr3_4:3876970-3876989 None:intergenic 50.0%
! GCTTTCATGGCTTCGGGTTT+GGG - chr3_4:3877326-3877345 None:intergenic 50.0%
! TGCTTTCATGGCTTCGGGTT+TGG - chr3_4:3877327-3877346 None:intergenic 50.0%
AAACCCGAAGCCATGAAAGC+AGG + chr3_4:3877326-3877345 Msa0486100:intron 50.0%
AACCCGAAGCCATGAAAGCA+GGG + chr3_4:3877327-3877346 Msa0486100:intron 50.0%
AACCCTGCTTTCATGGCTTC+GGG - chr3_4:3877332-3877351 None:intergenic 50.0%
! GGGTTTTACCCTACCCATTG+TGG + chr3_4:3877347-3877366 Msa0486100:intron 50.0%
ACACAAATGGTCGCAGCGAT+TGG + chr3_4:3877645-3877664 Msa0486100:CDS 50.0%
!! GTCGCAGCGATTGGCTTAAA+TGG + chr3_4:3877654-3877673 Msa0486100:CDS 50.0%
!! CGATTGGCTTAAATGGCCTG+AGG + chr3_4:3877661-3877680 Msa0486100:CDS 50.0%
! CAACCTTGCTGTGAAGTTGC+CGG + chr3_4:3877805-3877824 Msa0486100:CDS 50.0%
AATCCGGCAACTTCACAGCA+AGG - chr3_4:3877811-3877830 None:intergenic 50.0%
TATGTTCTTGGCCCCATGTC+AGG - chr3_4:3877845-3877864 None:intergenic 50.0%
GCTCCCTCTTATCTTGCTCA+AGG - chr3_4:3878509-3878528 None:intergenic 50.0%
AAGAGGGAGCTACATGGTGA+TGG + chr3_4:3878519-3878538 Msa0486100:CDS 50.0%
AGAGGGAGCTACATGGTGAT+GGG + chr3_4:3878520-3878539 Msa0486100:CDS 50.0%
GTTGGAGAGGATCCCTTAGA+AGG + chr3_4:3878597-3878616 Msa0486100:CDS 50.0%
!! ATCCCTTAGAAGGTGCTCTC+TGG + chr3_4:3878607-3878626 Msa0486100:CDS 50.0%
!! TCCCTTAGAAGGTGCTCTCT+GGG + chr3_4:3878608-3878627 Msa0486100:CDS 50.0%
!! TCCCAGAGAGCACCTTCTAA+GGG - chr3_4:3878612-3878631 None:intergenic 50.0%
!! ATCCCAGAGAGCACCTTCTA+AGG - chr3_4:3878613-3878632 None:intergenic 50.0%
!!! GATGCCGTTTTCATTCCTGC+TGG + chr3_4:3879367-3879386 Msa0486100:CDS 50.0%
! GGATAATGGTACCGCCTTTC+TGG + chr3_4:3879554-3879573 Msa0486100:intron 50.0%
! AGTATGGTGGGGTTGGAGAT+AGG - chr3_4:3879733-3879752 None:intergenic 50.0%
! GCTATTGAGTATGGTGGGGT+TGG - chr3_4:3879740-3879759 None:intergenic 50.0%
AGCATACGACCTTGAAGCTG+TGG + chr3_4:3879757-3879776 Msa0486100:intron 50.0%
CCGCCACCAATAATCACAAC+CGG - chr3_4:3879887-3879906 None:intergenic 50.0%
CCGGTTGTGATTATTGGTGG+CGG + chr3_4:3879884-3879903 Msa0486100:CDS 50.0%
TGTGATGTCAGCGGCGAATA+GGG - chr3_4:3880046-3880065 None:intergenic 50.0%
TTGTGATGTCAGCGGCGAAT+AGG - chr3_4:3880047-3880066 None:intergenic 50.0%
AGTTTCAGAACCGACGACCA+TGG + chr3_4:3880096-3880115 Msa0486100:CDS 50.0%
TCTGTTGCAGTCCTGCATCA+AGG + chr3_4:3880736-3880755 Msa0486100:intron 50.0%
TGAGTGCTTCCGTTTGACAG+AGG + chr3_4:3880793-3880812 Msa0486100:CDS 50.0%
AACCTCAAACTTGTCCGCAG+CGG - chr3_4:3880849-3880868 None:intergenic 50.0%
TATATATCCTCGCTCACCGG+AGG + chr3_4:3881075-3881094 Msa0486100:intron 50.0%
ATATATCCTCGCTCACCGGA+GGG + chr3_4:3881076-3881095 Msa0486100:intron 50.0%
GATGACTGCTTCTTGGTACC+AGG + chr3_4:3881440-3881459 Msa0486100:intron 50.0%
TTACAGGTCTGGGAAAGCCA+AGG + chr3_4:3881725-3881744 Msa0486100:intron 50.0%
TAAGGAAACACGCGACTCTG+GGG + chr3_4:3883663-3883682 Msa0486100:intron 50.0%
GTGAGGTCTTACCACCTCAA+AGG - chr3_4:3883894-3883913 None:intergenic 50.0%
GTGGTAAGACCTCACACGTA+AGG + chr3_4:3883899-3883918 Msa0486100:intron 50.0%
AGGATTACTGTGTGACCAGC+AGG + chr3_4:3883919-3883938 Msa0486100:intron 50.0%
AGGTGCAACCGAACATTGGA+GGG + chr3_4:3883939-3883958 Msa0486100:intron 50.0%
AAGCTGCACCTGTTGATCAC+AGG - chr3_4:3884013-3884032 None:intergenic 50.0%
TGTGATCAACAGGTGCAGCT+TGG + chr3_4:3884012-3884031 Msa0486100:intron 50.0%
! ATACAAGTGATGGGGCCGTT+GGG - chr3_4:3884060-3884079 None:intergenic 50.0%
! TATACAAGTGATGGGGCCGT+TGG - chr3_4:3884061-3884080 None:intergenic 50.0%
!! AGGGCGTTGATGTGTGGATT+AGG - chr3_4:3884363-3884382 None:intergenic 50.0%
!! CTACATAGGGCGTTGATGTG+TGG - chr3_4:3884369-3884388 None:intergenic 50.0%
AGGGTGCACGAGAAACTCAT+AGG + chr3_4:3884462-3884481 Msa0486100:intron 50.0%
GGGTGCACGAGAAACTCATA+GGG + chr3_4:3884463-3884482 Msa0486100:intron 50.0%
GGGTTCATCTGGATCAGGGA+GGG - chr3_4:3873929-3873948 None:intergenic 55.0%
TGGGTTCATCTGGATCAGGG+AGG - chr3_4:3873930-3873949 None:intergenic 55.0%
TACCGTTTCGGCGCCAACAT+TGG - chr3_4:3873989-3874008 None:intergenic 55.0%
GAAACGGTACCGTTGGAGGA+TGG + chr3_4:3874000-3874019 Msa0486100:CDS 55.0%
GGTGACGTGGCACAAGCTAT+CGG + chr3_4:3874021-3874040 Msa0486100:CDS 55.0%
GTGGCACAAGCTATCGGTGT+TGG + chr3_4:3874027-3874046 Msa0486100:CDS 55.0%
! GGACGATGAACGTGATGACG+TGG + chr3_4:3874071-3874090 Msa0486100:CDS 55.0%
! CGATGAACGTGATGACGTGG+TGG + chr3_4:3874074-3874093 Msa0486100:CDS 55.0%
TCGCTGTCGAAGGACGATGA+AGG + chr3_4:3874165-3874184 Msa0486100:CDS 55.0%
ATCCTCTGCTAAAGCTGCGG+CGG + chr3_4:3874224-3874243 Msa0486100:CDS 55.0%
GCGGCGGCGATAATGAAATG+CGG + chr3_4:3874240-3874259 Msa0486100:CDS 55.0%
GAGACGCGGCAGAAAGAGAA+AGG + chr3_4:3874413-3874432 Msa0486100:CDS 55.0%
ACGCGGCAGAAAGAGAAAGG+CGG + chr3_4:3874416-3874435 Msa0486100:CDS 55.0%
GGCTGAAACCAACAACGAGG+AGG + chr3_4:3875118-3875137 Msa0486100:CDS 55.0%
CTCAACCTCCTCCTCGTTGT+TGG - chr3_4:3875129-3875148 None:intergenic 55.0%
GAAAGAGAAGCCAGGAGACG+AGG + chr3_4:3875221-3875240 Msa0486100:CDS 55.0%
CGCAGCAACAGAGGAGACAA+AGG - chr3_4:3875533-3875552 None:intergenic 55.0%
CACCTAGAAGCTTCCCACCA+CGG - chr3_4:3875560-3875579 None:intergenic 55.0%
GTGAGTGGTCAAGATCTGGG+TGG + chr3_4:3875697-3875716 Msa0486100:CDS 55.0%
GCTGGGAACCACTAGTCATG+TGG + chr3_4:3876105-3876124 Msa0486100:CDS 55.0%
GGATGGCAATGGGTACCCTA+TGG + chr3_4:3876818-3876837 Msa0486100:intron 55.0%
GCAATGGGTACCCTATGGGT+AGG + chr3_4:3876823-3876842 Msa0486100:intron 55.0%
GTTGTTGCCCACGAGGATAC+GGG - chr3_4:3876903-3876922 None:intergenic 55.0%
GGATGCGGGTATGAGCACTA+AGG - chr3_4:3876956-3876975 None:intergenic 55.0%
! TATATGCTGGTTGCGGGGCT+GGG + chr3_4:3877255-3877274 Msa0486100:intron 55.0%
CAGGGATGGCAATTGGAACC+AGG - chr3_4:3877398-3877417 None:intergenic 55.0%
! GAGGGAGCTACATGGTGATG+GGG + chr3_4:3878521-3878540 Msa0486100:CDS 55.0%
TGGTGACCTGATGGTTGGAG+AGG + chr3_4:3878584-3878603 Msa0486100:CDS 55.0%
AGGGATCCTCTCCAACCATC+AGG - chr3_4:3878593-3878612 None:intergenic 55.0%
! ACTTGGTGAGGCAAACCAGC+AGG - chr3_4:3879385-3879404 None:intergenic 55.0%
GGTGAGAGCAAGCCTTGCAA+TGG - chr3_4:3879596-3879615 None:intergenic 55.0%
!! GGTGGCGGTGCTACTTGAAT+TGG + chr3_4:3879899-3879918 Msa0486100:CDS 55.0%
GAACCGACGAATTGCGTCAC+CGG + chr3_4:3879982-3880001 Msa0486100:CDS 55.0%
GTTCCGGTGACGCAATTCGT+CGG - chr3_4:3879988-3880007 None:intergenic 55.0%
CACGACATGGCTGAGTGTTC+CGG - chr3_4:3880004-3880023 None:intergenic 55.0%
ATCCGCTGCGGACAAGTTTG+AGG + chr3_4:3880844-3880863 Msa0486100:CDS 55.0%
ATGCAAGCACACTTGCCCTC+CGG - chr3_4:3881094-3881113 None:intergenic 55.0%
CAATGTTCGGTTGCACCTGC+TGG - chr3_4:3883937-3883956 None:intergenic 55.0%
CAGCAGGTGCAACCGAACAT+TGG + chr3_4:3883935-3883954 Msa0486100:intron 55.0%
CAGGTGCAACCGAACATTGG+AGG + chr3_4:3883938-3883957 Msa0486100:intron 55.0%
! GGCCAATGTTGGCGCCGAAA+CGG + chr3_4:3873984-3874003 Msa0486100:CDS 60.0%
! ACCGTTGGAGGATGGTGACG+TGG + chr3_4:3874008-3874027 Msa0486100:CDS 60.0%
GCCACGTCACCATCCTCCAA+CGG - chr3_4:3874012-3874031 None:intergenic 60.0%
GCATGTTGGCGCCAAAACGG+TGG + chr3_4:3874140-3874159 Msa0486100:CDS 60.0%
! CGACAGCGACACCACCGTTT+TGG - chr3_4:3874154-3874173 None:intergenic 60.0%
!! AACGGTGGTGTCGCTGTCGA+AGG + chr3_4:3874155-3874174 Msa0486100:CDS 60.0%
ACAGCACACAGGGCATGCCT+TGG - chr3_4:3874950-3874969 None:intergenic 60.0%
! CTCCGTGGTGGGAAGCTTCT+AGG + chr3_4:3875555-3875574 Msa0486100:CDS 60.0%
! CGTGGTGGGAAGCTTCTAGG+TGG + chr3_4:3875558-3875577 Msa0486100:CDS 60.0%
GGGTGGCATGCAAATGCCGA+TGG + chr3_4:3875714-3875733 Msa0486100:CDS 60.0%
! GTATATGCTGGTTGCGGGGC+TGG + chr3_4:3877254-3877273 Msa0486100:intron 60.0%
! ATGGCTTCGGGTTTGGGTCC+GGG - chr3_4:3877320-3877339 None:intergenic 60.0%
! CATGGCTTCGGGTTTGGGTC+CGG - chr3_4:3877321-3877340 None:intergenic 60.0%
GCAATTGGAACCAGGCCCGA+TGG - chr3_4:3877390-3877409 None:intergenic 60.0%
!! GGAGCTACATGGTGATGGGG+AGG + chr3_4:3878524-3878543 Msa0486100:CDS 60.0%
!! GCTACATGGTGATGGGGAGG+CGG + chr3_4:3878527-3878546 Msa0486100:CDS 60.0%
! TGCAAGGCTTGCTCTCACCG+TGG + chr3_4:3879597-3879616 Msa0486100:intron 60.0%
GACGTTAGCGCCATGGTCGT+CGG - chr3_4:3880109-3880128 None:intergenic 60.0%
TGCACACATGCATGCTGCCG+AGG - chr3_4:3882827-3882846 None:intergenic 60.0%
TCGGCGCCAACATTGGCCGT+AGG - chr3_4:3873982-3874001 None:intergenic 65.0%
! TGGCGCCGAAACGGTACCGT+TGG + chr3_4:3873993-3874012 Msa0486100:CDS 65.0%
CGCCGAAACGGTACCGTTGG+AGG + chr3_4:3873996-3874015 Msa0486100:CDS 65.0%
CACGGAGCTCGCAGCAACAG+AGG - chr3_4:3875542-3875561 None:intergenic 65.0%
CTCTGTTGCTGCGAGCTCCG+TGG + chr3_4:3875540-3875559 Msa0486100:CDS 65.0%
TGTTGCTGCGAGCTCCGTGG+TGG + chr3_4:3875543-3875562 Msa0486100:CDS 65.0%
GTTGCTGCGAGCTCCGTGGT+GGG + chr3_4:3875544-3875563 Msa0486100:CDS 65.0%
TGCCCAAGCCCGTATCCTCG+TGG + chr3_4:3876892-3876911 Msa0486100:intron 65.0%
GCCCAAGCCCGTATCCTCGT+GGG + chr3_4:3876893-3876912 Msa0486100:intron 65.0%
GCCCACGAGGATACGGGCTT+GGG - chr3_4:3876897-3876916 None:intergenic 65.0%
TGCCCACGAGGATACGGGCT+TGG - chr3_4:3876898-3876917 None:intergenic 65.0%
! TAGCGGGTATCCATCGGGCC+TGG + chr3_4:3877377-3877396 Msa0486100:intron 65.0%
GCGGCGAATAGGGTCCAGAG+TGG - chr3_4:3880036-3880055 None:intergenic 65.0%
! CGCCGCCGCAGCTTTAGCAG+AGG - chr3_4:3874229-3874248 None:intergenic 70.0%
CACTTGCCCTCCGGTGAGCG+AGG - chr3_4:3881085-3881104 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 3873865 3884771 3873865 ID=Msa0486100;Name=Msa0486100
chr3_4 mRNA 3873865 3884771 3873865 ID=Msa0486100-mRNA-1;Parent=Msa0486100;Name=Msa0486100-mRNA-1;_AED=0.40;_eAED=0.42;_QI=0|0.16|0.15|0.84|1|1|13|0|1031
chr3_4 exon 3873865 3874509 3873865 ID=Msa0486100-mRNA-1:exon:1521;Parent=Msa0486100-mRNA-1
chr3_4 exon 3874617 3874709 3874617 ID=Msa0486100-mRNA-1:exon:1522;Parent=Msa0486100-mRNA-1
chr3_4 exon 3875104 3875242 3875104 ID=Msa0486100-mRNA-1:exon:1523;Parent=Msa0486100-mRNA-1
chr3_4 exon 3875323 3875386 3875323 ID=Msa0486100-mRNA-1:exon:1524;Parent=Msa0486100-mRNA-1
chr3_4 exon 3875470 3876208 3875470 ID=Msa0486100-mRNA-1:exon:1525;Parent=Msa0486100-mRNA-1
chr3_4 exon 3877611 3877940 3877611 ID=Msa0486100-mRNA-1:exon:1526;Parent=Msa0486100-mRNA-1
chr3_4 exon 3878426 3878725 3878426 ID=Msa0486100-mRNA-1:exon:1527;Parent=Msa0486100-mRNA-1
chr3_4 exon 3879160 3879232 3879160 ID=Msa0486100-mRNA-1:exon:1528;Parent=Msa0486100-mRNA-1
chr3_4 exon 3879332 3879417 3879332 ID=Msa0486100-mRNA-1:exon:1529;Parent=Msa0486100-mRNA-1
chr3_4 exon 3879856 3880146 3879856 ID=Msa0486100-mRNA-1:exon:1530;Parent=Msa0486100-mRNA-1
chr3_4 exon 3880746 3880865 3880746 ID=Msa0486100-mRNA-1:exon:1531;Parent=Msa0486100-mRNA-1
chr3_4 exon 3881462 3881520 3881462 ID=Msa0486100-mRNA-1:exon:1532;Parent=Msa0486100-mRNA-1
chr3_4 exon 3884615 3884771 3884615 ID=Msa0486100-mRNA-1:exon:1533;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3873865 3874509 3873865 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3874617 3874709 3874617 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3875104 3875242 3875104 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3875323 3875386 3875323 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3875470 3876208 3875470 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3877611 3877940 3877611 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3878426 3878725 3878426 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3879160 3879232 3879160 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3879332 3879417 3879332 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3879856 3880146 3879856 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3880746 3880865 3880746 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3881462 3881520 3881462 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
chr3_4 CDS 3884615 3884771 3884615 ID=Msa0486100-mRNA-1:cds;Parent=Msa0486100-mRNA-1
Gene Sequence

>Msa0486100

ATGGCGGAGGAAGAGAACAACGACATAGTCACATATATTGTGAAAATCAAAGTCACACTCACCCTCCCTGATCCAGATGAACCCATTCCTGATCATGATCATCGAGAAACACAACCTACGGCCAATGTTGGCGCCGAAACGGTACCGTTGGAGGATGGTGACGTGGCACAAGCTATCGGTGTTGGAGCTGAAACGTCGTCGTTGAAGGACGATGAACGTGATGACGTGGTGGAAGCAGCTGAAGAATCTATTCCTGATCGAGAAAAACAAGATATGCATGTTGGCGCCAAAACGGTGGTGTCGCTGTCGAAGGACGATGAAGGTTCGGTTGAAGGTGATAACATTGCAGCTAGGGATTCATCCTCTGCTAAAGCTGCGGCGGCGATAATGAAATGCGGCAGAAAGAAAAAGAAACGTGGAAGAAAGAGTTTTGCAGAAATTGAAAAGATGAAGAGGGATGCAGAAGCGTTGTTAGGGAACAGAATAAAGGAAGAAACTGGTAAAGATGTGGTAGCTGGAGGCTCTTCATCATTTCAACTGGTGAGAAAGAGACGCGGCAGAAAGAGAAAGGCGGAGAAAGAAACCACCAAAAATGAGGTTCCACAAGTCCACAAGAAACTTAAAATCAGCGAGAGTAATGCTAAGGGGTTTCCTCAATGTGCCATCAATGTCAAAGAAATGACAGGGCCAGCGTTGTTAGATGCACAAAATGCAAACGGAAAAGATTTTGCACATCATGAAATGAAGCGTAAGGCTGAAACCAACAACGAGGAGGAGGTTGAGTTCTCTAAGTATCTGCTGAAAGGACTTCTTCCACATTTAAGACGGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAGGAGACGAGGGCTCTCACTCTCAAAGCTAAATATAAAACCGGCGGATTATTCTAAAGATGAGCGTGTGTTCTGTGACAACTGTAAAACATCAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACCTTTGTCTCCTCTGTTGCTGCGAGCTCCGTGGTGGGAAGCTTCTAGGTGGTGCAGATCCAATTAAGCTTGAGTATGATTTTCGAGGTCGCAATTATCTACATGGTGGAAATGAAGAAAAACATGTTAAAGAAAGTGTATCACATGCAGAGGATGAGTCTACGATTCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGCCGATGGTAGCATTCCTTGTCCAAAAGCTGATAATGAATGTGATCATGGTTTCCTTGAACTGAGAAGGATACTTCCTCCAAATTGCATCTCTGAGTTAGTTTGTAAAGCAAACAAACTTGCAGAAACAATCAAGCTTCAAGATGTAGAGGAGACTCGTGATAATAGGTGTTCTTGCTCGAAACCTGTTAGGTACACCGATGATATACACAATAACACAAGGAAGGCAGCTTTTCATGAAGATTCAAGTGACAAATTTTTATACTGTCCAAGGGCTGTAGATCTACACCATGGAGATTTAAAACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGCACATCTGGTTTAAGCTGGGAACCACTAGTCATGTGGCGTGCATTCCGTCAAATAACCAACTCCAAATACGATGTAGTTTTGGATGTGAAGGCAGTTAATTGTTTAGATTGGTGTGAGGGAGATATTAATATCCACCAATTCTTCACTGGGTACACAAATGGTCGCAGCGATTGGCTTAAATGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACTTTTACCTCGTCATCATGCTGAGTTCATATCTTCCTTGCCTTATAAAGAATACACAAATCCTTTTAGTGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTGTAAAGCCTGACATGGGGCCAAGAACATATATTGCTTATGGATTTACTCAAAATCTCGGACGCGGTGATTCTGTGACTAAGCTCCATTGTGATGTGTCTGATGCAGTAAATGTGTTGACTCATATCGCTAAAGTGGAACTAAAACCTGAGGAAATTAGTGTCATTAAGAAATTGACACGTAAGCACCTTGAGCAAGATAAGAGGGAGCTACATGGTGATGGGGAGGCGGTTGATATGTTTCACCAACTCTCTGACACTAATGATGGTGACCTGATGGTTGGAGAGGATCCCTTAGAAGGTGCTCTCTGGGATATTTTTCGGAGAGAAGATGTACCCAAATTGAAAGAATATCTAGAGAAGCATTTCAGAGAGTTCAGACATGTCAATTGCATTCCTTTAAAGCAGGTTATTGACCCCCTTCATGATCAGACCATTTATCTGAATATGGAGCATAAGATGAAACTTAAGAAAGAGTATGGAATTGAGCCTTGGACTTTTATTCAGAAGTTGGGAGATGCCGTTTTCATTCCTGCTGGTTTGCCTCACCAAGTCAGAAATCTGAAGAAGGAACTGCTCGTATTTAACGGGAAATCCGGTTGTGATTATTGGTGGCGGTGCTACTTGAATTGGAACGTAAGCCATCAGAAATTGGTGAATTACAAACGGTTTCCAACCAATTCCTCAGACAATGAACCGACGAATTGCGTCACCGGAACACTCAGCCATGTCGTGATTCATGAACCACTCTGGACCCTATTCGCCGCTGACATCACAATAAACCTCCGACAAGAACTTATTTTCAACAGTTTCAGAACCGACGACCATGGCGCTAACGTCAAATCATCAGCCATGATTTCCTGCATCAAGGTTGCACTTGATTTTGTCTCTCCCGAACATATTGGTGAGTGCTTCCGTTTGACAGAGGAATTCCGCAAGCTTCCGATAAATCACAGATCCGCTGCGGACAAGTTTGAGGTGAAGAAAATTGCCGTACATGCTATGCTTGATGTGGTTGAAAAATTAGAGAAAGCAAGCTCCCAAAATGGCGAAAATGGTGATCTAGGGTTTGATGCTCTTCTTCTTCGTCGGCTCATCGATTCTTCATCTATTCCACAATTTTTTCCTCTCTTATTTGCCGTTCCTTGTCAGGTTACATCTCATATCAAATTTGGTTTTGAATTTCGTTTGTAA
Protein sequence

>Msa0486100

MAEEENNDIVTYIVKIKVTLTLPDPDEPIPDHDHRETQPTANVGAETVPLEDGDVAQAIGVGAETSSLKDDERDDVVEAAEESIPDREKQDMHVGAKTVVSLSKDDEGSVEGDNIAARDSSSAKAAAAIMKCGRKKKKRGRKSFAEIEKMKRDAEALLGNRIKEETGKDVVAGGSSSFQLVRKRRGRKRKAEKETTKNEVPQVHKKLKISESNAKGFPQCAINVKEMTGPALLDAQNANGKDFAHHEMKRKAETNNEEEVEFSKYLLKGLLPHLRRLDEEQMIEKEREARRRGLSLSKLNIKPADYSKDERVFCDNCKTSIFDYHRSCTKCSFDLCLLCCCELRGGKLLGGADPIKLEYDFRGRNYLHGGNEEKHVKESVSHAEDESTIREWSRSGWHANADGSIPCPKADNECDHGFLELRRILPPNCISELVCKANKLAETIKLQDVEETRDNRCSCSKPVRYTDDIHNNTRKAAFHEDSSDKFLYCPRAVDLHHGDLKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQITNSKYDVVLDVKAVNCLDWCEGDINIHQFFTGYTNGRSDWLKWPEVLKLKDWPPSDLFQELLPRHHAEFISSLPYKEYTNPFSGSLNLAVKLPDYCVKPDMGPRTYIAYGFTQNLGRGDSVTKLHCDVSDAVNVLTHIAKVELKPEEISVIKKLTRKHLEQDKRELHGDGEAVDMFHQLSDTNDGDLMVGEDPLEGALWDIFRREDVPKLKEYLEKHFREFRHVNCIPLKQVIDPLHDQTIYLNMEHKMKLKKEYGIEPWTFIQKLGDAVFIPAGLPHQVRNLKKELLVFNGKSGCDYWWRCYLNWNVSHQKLVNYKRFPTNSSDNEPTNCVTGTLSHVVIHEPLWTLFAADITINLRQELIFNSFRTDDHGANVKSSAMISCIKVALDFVSPEHIGECFRLTEEFRKLPINHRSAADKFEVKKIAVHAMLDVVEKLEKASSQNGENGDLGFDALLLRRLIDSSSIPQFFPLLFAVPCQVTSHIKFGFEFRL*