AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0116110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116110 MtrunA17_Chr1g0211661 87.227 869 69 4 1 827 1 869 0.0 1448
Msa0116110 MtrunA17_Chr1g0211711 73.684 589 141 5 246 823 406 991 0.0 897
Msa0116110 MtrunA17_Chr1g0211711 50.000 162 59 5 42 194 7 155 3.46e-25 113
Msa0116110 MtrunA17_Chr1g0211711 74.603 63 16 0 919 981 990 1052 6.64e-22 102
Msa0116110 MtrunA17_Chr1g0183311 68.730 614 154 4 248 823 209 822 0.0 878
Msa0116110 MtrunA17_Chr1g0183311 75.410 61 15 0 921 981 823 883 1.43e-21 101
Msa0116110 MtrunA17_Chr5g0448301 61.196 719 183 10 79 793 5 631 0.0 806
Msa0116110 MtrunA17_Chr5g0448301 53.293 167 53 6 40 200 2 149 7.01e-30 126
Msa0116110 MtrunA17_Chr5g0426961 68.870 575 171 2 250 823 208 775 0.0 805
Msa0116110 MtrunA17_Chr5g0426961 76.562 64 15 0 919 982 774 837 1.30e-22 104
Msa0116110 MtrunA17_Chr1g0211691 69.871 541 146 7 247 771 406 945 0.0 751
Msa0116110 MtrunA17_Chr1g0211691 63.131 198 65 2 1 194 1 194 4.53e-58 216
Msa0116110 MtrunA17_Chr5g0420361 60.960 625 206 9 229 823 122 738 0.0 748
Msa0116110 MtrunA17_Chr5g0420361 73.171 41 11 0 921 961 739 779 1.43e-11 68.9
Msa0116110 MtrunA17_Chr6g0472441 58.537 615 192 11 242 823 76 660 0.0 702
Msa0116110 MtrunA17_Chr6g0472441 64.151 53 16 1 921 973 661 710 1.27e-11 68.9
Msa0116110 MtrunA17_Chr2g0289121 45.455 572 269 9 258 823 228 762 2.81e-148 462
Msa0116110 MtrunA17_Chr2g0289121 59.649 57 23 0 921 977 763 819 1.55e-12 72.0
Msa0116110 MtrunA17_Chr4g0075261 42.927 615 265 15 253 823 235 807 8.00e-146 457
Msa0116110 MtrunA17_Chr4g0075261 56.140 57 25 0 921 977 808 864 2.58e-12 71.2
Msa0116110 MtrunA17_Chr7g0275771 46.970 462 227 7 265 711 218 676 2.05e-122 397
Msa0116110 MtrunA17_Chr7g0275771 65.591 93 32 0 729 821 773 865 4.32e-33 138
Msa0116110 MtrunA17_Chr7g0275771 50.725 69 34 0 921 989 868 936 1.16e-13 75.9
Msa0116110 MtrunA17_Chr2g0289031 52.819 337 149 3 489 823 8 336 3.73e-108 342
Msa0116110 MtrunA17_Chr2g0289031 56.140 57 25 0 921 977 337 393 1.05e-11 68.2
Msa0116110 MtrunA17_Chr1g0192011 33.715 611 320 10 258 826 339 906 1.08e-107 359
Msa0116110 MtrunA17_Chr1g0147021 45.880 449 205 9 265 707 950 1366 7.62e-105 360
Msa0116110 MtrunA17_Chr1g0147021 69.318 88 27 0 736 823 1551 1638 4.04e-33 139
Msa0116110 MtrunA17_Chr1g0147021 68.085 47 15 0 922 968 1640 1686 1.97e-12 72.0
Msa0116110 MtrunA17_Chr2g0281051 33.868 623 334 14 265 823 289 897 1.87e-91 313
Msa0116110 MtrunA17_Chr4g0048531 35.657 502 231 13 405 823 727 1219 1.22e-78 281
Msa0116110 MtrunA17_Chr4g0048531 30.303 132 89 1 220 348 302 433 1.11e-14 79.3
Msa0116110 MtrunA17_Chr8g0364421 51.953 256 92 3 293 548 5 229 1.14e-74 245
Msa0116110 MtrunA17_Chr7g0231061 58.242 182 71 2 550 728 12 191 7.31e-61 206
Msa0116110 MtrunA17_Chr8g0361381 52.973 185 83 2 487 671 28 208 1.12e-55 192
Msa0116110 MtrunA17_Chr2g0289091 55.634 142 62 1 563 704 23 163 2.03e-43 164
Msa0116110 MtrunA17_Chr2g0289091 64.286 98 33 1 728 823 301 398 4.14e-34 136
Msa0116110 MtrunA17_Chr6g0469821 58.219 146 47 3 1 138 1 140 5.68e-39 141
Msa0116110 MtrunA17_Chr8g0361391 62.500 96 35 1 735 830 50 144 2.25e-35 132
Msa0116110 MtrunA17_Chr8g0340381 54.930 142 41 4 584 721 36 158 9.90e-33 125
Msa0116110 MtrunA17_Chr1g0211671 100.000 59 0 0 921 979 17 75 1.89e-32 122
Msa0116110 MtrunA17_Chr2g0289041 37.342 158 92 4 258 414 53 204 8.73e-28 112
Msa0116110 MtrunA17_Chr1g0211701 77.966 59 13 0 921 979 59 117 4.98e-24 99.8
Msa0116110 MtrunA17_Chr1g0211701 81.818 55 10 0 769 823 4 58 5.27e-24 99.8
Msa0116110 MtrunA17_Chr1g0211681 53.261 92 35 2 55 138 1 92 1.39e-17 79.0
Msa0116110 MtrunA17_Chr2g0289101 36.923 130 76 3 312 440 5 129 9.54e-17 79.0
Msa0116110 MtrunA17_Chr1g0210321 44.545 110 41 6 839 931 73 179 2.00e-15 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116110 AT1G11950.1 49.378 563 259 10 264 823 272 811 9.50e-169 518
Msa0116110 AT1G11950.1 54.386 57 26 0 921 977 812 868 1.14e-12 72.8
Msa0116110 AT1G11950.3 49.378 563 259 10 264 823 272 811 9.50e-169 518
Msa0116110 AT1G11950.3 54.386 57 26 0 921 977 812 868 1.14e-12 72.8
Msa0116110 AT1G62310.1 48.789 578 276 9 251 823 275 837 9.14e-167 513
Msa0116110 AT1G11950.2 48.644 553 258 10 264 813 272 801 5.75e-162 498
Msa0116110 AT3G07610.1 56.744 430 175 4 395 823 415 834 2.61e-153 482
Msa0116110 AT3G07610.1 46.552 116 62 0 254 369 225 340 6.00e-26 116
Msa0116110 AT3G07610.3 54.120 449 179 5 395 823 415 856 1.65e-145 462
Msa0116110 AT3G07610.3 46.552 116 62 0 254 369 225 340 5.92e-26 116
Msa0116110 AT4G00990.3 45.415 458 225 7 248 699 143 581 1.70e-117 380
Msa0116110 AT4G00990.3 65.517 87 30 0 735 821 684 770 5.34e-30 128
Msa0116110 AT4G00990.2 45.415 458 225 7 248 699 143 581 1.73e-117 380
Msa0116110 AT4G00990.2 65.517 87 30 0 735 821 684 770 5.38e-30 128
Msa0116110 AT4G00990.1 45.415 458 225 7 248 699 143 581 5.89e-117 380
Msa0116110 AT4G00990.1 65.517 87 30 0 735 821 684 770 5.39e-30 128
Msa0116110 AT4G00990.1 56.140 57 25 0 921 977 773 829 1.18e-12 72.8
Msa0116110 AT3G07610.2 57.244 283 114 2 395 677 415 690 1.21e-94 318
Msa0116110 AT3G07610.2 46.552 116 62 0 254 369 225 340 1.22e-25 114
Msa0116110 AT1G09060.4 30.897 602 343 11 258 828 293 852 2.37e-79 279
Msa0116110 AT1G09060.3 30.897 602 343 11 258 828 293 852 2.37e-79 279
Msa0116110 AT1G09060.2 30.897 602 343 11 258 828 279 838 3.27e-79 279
Msa0116110 AT1G09060.1 30.897 602 343 11 258 828 279 838 3.27e-79 279
Msa0116110 AT4G21430.1 34.218 377 209 5 480 823 485 855 6.46e-62 228
Msa0116110 AT3G24230.1 35.366 164 75 7 808 940 67 230 1.73e-11 68.2

Find 246 sgRNAs with CRISPR-Local

Find 761 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAGATATTCTTTCAATT+TGG 0.093161 1_3:+34989258 None:intergenic
GCCGATTCTACCTGCTTTAA+AGG 0.132025 1_3:+34989199 None:intergenic
GCCTCCTTCTGATTTATTTC+AGG 0.172247 1_3:-34990210 Msa0116110:CDS
GTTACATCTCATATCAAATT+TGG 0.177557 1_3:-34983200 Msa0116110:CDS
AAATCATACTCAAGCTTAAT+TGG 0.220679 1_3:+34992325 None:intergenic
ATCCAAAACTACATCGTATT+TGG 0.227892 1_3:+34991760 None:intergenic
GGAAATCCGGTTGTGATTAT+TGG 0.228341 1_3:-34988035 Msa0116110:CDS
AGCTCCCAAAATGGCGAAAA+TGG 0.240614 1_3:-34983317 Msa0116110:CDS
CGGTTCATTGTCTGAGGAAT+TGG 0.247802 1_3:+34987948 None:intergenic
TCACATTCATTATCAGCTTT+TGG 0.248622 1_3:+34992163 None:intergenic
GGATTTGTGTATTCTTTATA+AGG 0.268369 1_3:+34990146 None:intergenic
GTCGCAGCGATTGGCTTAAA+TGG 0.273010 1_3:-34990259 Msa0116110:CDS
AGTACATTGCTGACAATTAC+AGG 0.278275 1_3:+34991851 None:intergenic
CCAAGAACATATATTGCTTA+TGG 0.280860 1_3:-34990059 Msa0116110:CDS
ATCCCAGAGAGCACCTTCTA+AGG 0.286251 1_3:+34989303 None:intergenic
TGTCATTTCTTTGACATTGA+TGG 0.286327 1_3:+34993280 None:intergenic
CTCCGTGGTGGGAAGCTTCT+AGG 0.287089 1_3:-34992358 Msa0116110:CDS
TCTAGATATTCTTTCAATTT+GGG 0.290597 1_3:+34989259 None:intergenic
CTCCAAATACGATGTAGTTT+TGG 0.304082 1_3:-34991762 Msa0116110:CDS
ACTAACTCAGAGATGCAATT+TGG 0.317312 1_3:+34992106 None:intergenic
CGACAGCGACACCACCGTTT+TGG 0.322177 1_3:+34993762 None:intergenic
TCAGACCATTTATCTGAATA+TGG 0.327236 1_3:-34988733 Msa0116110:CDS
CCATAAGCAATATATGTTCT+TGG 0.328103 1_3:+34990059 None:intergenic
AATGGCGAAAATGGTGATCT+AGG 0.328223 1_3:-34983308 Msa0116110:CDS
CAACCTTGCTGTGAAGTTGC+CGG 0.339593 1_3:-34990108 Msa0116110:CDS
ATGCTCCATATTCAGATAAA+TGG 0.340188 1_3:+34988728 None:intergenic
CTTATTTGCCGTTCCTTGTC+AGG 0.349234 1_3:-34983222 Msa0116110:CDS
TTGTGATGTCAGCGGCGAAT+AGG 0.356503 1_3:+34987869 None:intergenic
AGGGATGCAGAAGCGTTGTT+AGG 0.362991 1_3:-34993595 Msa0116110:CDS
ATGAAACTTAAGAAAGAGTA+TGG 0.363484 1_3:-34988702 Msa0116110:intron
GAACGTAAGCCATCAGAAAT+TGG 0.378011 1_3:-34987992 Msa0116110:CDS
ATTCGTGAGTGGTCAAGATC+TGG 0.381498 1_3:-34992220 Msa0116110:CDS
ATCCCTTAGAAGGTGCTCTC+TGG 0.383194 1_3:-34989306 Msa0116110:CDS
GTGTACTACAGCTCCCAAAA+TGG 0.386667 1_3:-34983326 Msa0116110:intron
CACGACATGGCTGAGTGTTC+CGG 0.386914 1_3:+34987912 None:intergenic
TGTGATGTCAGCGGCGAATA+GGG 0.394626 1_3:+34987870 None:intergenic
CTAAAGATGAGCGTGTGTTC+TGG 0.394804 1_3:-34992548 Msa0116110:intron
CTCAAAGCTAAATATAAAAC+CGG 0.396606 1_3:-34992580 Msa0116110:CDS
CTCAACCTCCTCCTCGTTGT+TGG 0.396999 1_3:+34992787 None:intergenic
GTTCTTGCTCGAAACCTGTT+AGG 0.397008 1_3:-34992015 Msa0116110:CDS
TAGAGGAGACTCGTGATAAT+AGG 0.397753 1_3:-34992039 Msa0116110:CDS
TGATCAGGAATGGGTTCATC+TGG 0.401180 1_3:+34993976 None:intergenic
GGTGGCGGTGCTACTTGAAT+TGG 0.404321 1_3:-34988014 Msa0116110:CDS
ATCCTCCAACGGTACCGTTT+CGG 0.404627 1_3:+34993915 None:intergenic
ATATCATCGGTGTACCTAAC+AGG 0.407455 1_3:+34992001 None:intergenic
AGGCAGTTAATTGTTTAGAT+TGG 0.408112 1_3:-34991733 Msa0116110:CDS
TTCAATGGCACTGGAGCAAA+GGG 0.413215 1_3:-34991877 Msa0116110:CDS
TATGTTCTTGGCCCCATGTC+AGG 0.417723 1_3:+34990071 None:intergenic
AATATCCACCAATTCTTCAC+TGG 0.420686 1_3:-34990293 Msa0116110:CDS
GACGATGAAGGTTCGGTTGA+AGG 0.422097 1_3:-34993736 Msa0116110:CDS
CTCGTATTTAACGGGAAATC+CGG 0.427671 1_3:-34988048 Msa0116110:CDS
AGGTTGAGAGAACCACTAAA+AGG 0.429360 1_3:+34990125 None:intergenic
CAGAAATTGAAAAGATGAAG+AGG 0.429960 1_3:-34993615 Msa0116110:CDS
AAGGAACTGCTCGTATTTAA+CGG 0.432547 1_3:-34988057 Msa0116110:CDS
CGAGGTCGCAATTATCTACA+TGG 0.434006 1_3:-34992301 Msa0116110:CDS
AATGTACTTGAATGCACATC+TGG 0.441844 1_3:-34991836 Msa0116110:CDS
TTTGTCTCTCCCGAACATAT+TGG 0.442105 1_3:-34987145 Msa0116110:CDS
AGGCTCTTCATCATTTCAAC+TGG 0.442693 1_3:-34993530 Msa0116110:CDS
TACTACTAGTCTTACAATCA+TGG 0.444577 1_3:+34987774 None:intergenic
GGAATGGGTTCATCTGGATC+AGG 0.444988 1_3:+34993982 None:intergenic
GCAGCGGATCTGTGATTTAT+CGG 0.450090 1_3:+34987085 None:intergenic
AACAGAATAAAGGAAGAAAC+TGG 0.451192 1_3:-34993571 Msa0116110:CDS
GTTGGAGAGGATCCCTTAGA+AGG 0.451802 1_3:-34989316 Msa0116110:CDS
GAAGCACTCACCAATATGTT+CGG 0.452411 1_3:+34987135 None:intergenic
GAACCGACGAATTGCGTCAC+CGG 0.456111 1_3:-34987931 Msa0116110:CDS
TACCGTTTCGGCGCCAACAT+TGG 0.457827 1_3:+34993927 None:intergenic
TTCTTCACTGGGTACACAAA+TGG 0.460684 1_3:-34990281 Msa0116110:CDS
CGCCGAAACGGTACCGTTGG+AGG 0.461207 1_3:-34993917 Msa0116110:CDS
TCTTCCACATTTAAGACGGT+TGG 0.461419 1_3:-34992738 Msa0116110:CDS
GAAGTATCCTTCTCAGTTCA+AGG 0.464781 1_3:+34992131 None:intergenic
AGCACCTTGAGCAAGATAAG+AGG 0.465265 1_3:-34989411 Msa0116110:CDS
TTAATGACACTAATTTCCTC+AGG 0.465562 1_3:+34989448 None:intergenic
GGCCAATGTTGGCGCCGAAA+CGG 0.467500 1_3:-34993929 Msa0116110:CDS
TTACCTTCAGATTTCTGACT+TGG 0.467821 1_3:+34988514 None:intergenic
AATGCACATCTGGTTTAAGC+TGG 0.467845 1_3:-34991826 Msa0116110:CDS
TTGATGCTCTTCTTCTTCGT+CGG 0.470722 1_3:-34983283 Msa0116110:CDS
TCTTTCAATTTCAACACCTC+AGG 0.472947 1_3:+34990236 None:intergenic
GTTTCTCGATGATCATGATC+AGG 0.474522 1_3:+34993961 None:intergenic
ATTTGGAGTTGGTTATTTGA+CGG 0.476343 1_3:+34991777 None:intergenic
AGGAACTGCTCGTATTTAAC+GGG 0.477452 1_3:-34988056 Msa0116110:CDS
TTGTGTACCCAGTGAAGAAT+TGG 0.478196 1_3:+34990285 None:intergenic
TTAAGTTTCTTGTGGACTTG+TGG 0.479397 1_3:+34993448 None:intergenic
GACTTGTAGGAATTGAGCCT+TGG 0.481982 1_3:-34988590 Msa0116110:intron
ATCCGCTGCGGACAAGTTTG+AGG 0.482235 1_3:-34987071 Msa0116110:intron
ACACAAATGGTCGCAGCGAT+TGG 0.484713 1_3:-34990268 Msa0116110:CDS
AGCTGAAACGTCGTCGTTGA+AGG 0.484777 1_3:-34993863 Msa0116110:CDS
CGATGATCATGATCAGGAAT+GGG 0.491693 1_3:+34993967 None:intergenic
AGGTGATAACATTGCAGCTA+GGG 0.495234 1_3:-34993716 Msa0116110:CDS
TGTTGAAAATAAGTTCTTGT+CGG 0.496312 1_3:+34987839 None:intergenic
TCGATGATCATGATCAGGAA+TGG 0.497827 1_3:+34993966 None:intergenic
TCCCTTAGAAGGTGCTCTCT+GGG 0.498565 1_3:-34989305 Msa0116110:CDS
ATCAAGTGCAACCTTGATGC+AGG 0.498619 1_3:+34987168 None:intergenic
AGAAATTGGTGAATTACAAA+CGG 0.500398 1_3:-34987978 Msa0116110:CDS
GTTGTTAGGGAACAGAATAA+AGG 0.500566 1_3:-34993581 Msa0116110:CDS
CACATCAAGCATAGCATGTA+CGG 0.501504 1_3:+34986440 None:intergenic
ATCAATGTCAAAGAAATGAC+AGG 0.501804 1_3:-34993278 Msa0116110:CDS
GAGACGCGGCAGAAAGAGAA+AGG 0.502047 1_3:-34993500 Msa0116110:CDS
TGCGGAATTCCTCTGTCAAA+CGG 0.503979 1_3:+34987113 None:intergenic
GTCGAAGGACGATGAAGGTT+CGG 0.505191 1_3:-34993743 Msa0116110:CDS
CCGCCACCAATAATCACAAC+CGG 0.505196 1_3:+34988029 None:intergenic
AGGTGTTGAAATTGAAAGAT+TGG 0.508050 1_3:-34990232 Msa0116110:CDS
AGGGATCCTCTCCAACCATC+AGG 0.508501 1_3:+34989323 None:intergenic
AACTACATCGTATTTGGAGT+TGG 0.509194 1_3:+34991766 None:intergenic
GGGATGCAGAAGCGTTGTTA+GGG 0.509891 1_3:-34993594 Msa0116110:CDS
TTTCAATGGCACTGGAGCAA+AGG 0.515097 1_3:-34991878 Msa0116110:CDS
GTTGACTCATATCGCTAAAG+TGG 0.516636 1_3:-34989479 Msa0116110:CDS
ATGATTTGACGTTAGCGCCA+TGG 0.517379 1_3:+34987800 None:intergenic
ACTGGTAAAGATGTGGTAGC+TGG 0.518953 1_3:-34993553 Msa0116110:CDS
ATGGCGAAAATGGTGATCTA+GGG 0.522076 1_3:-34983307 Msa0116110:CDS
TCAGGCTTTACACAATAATC+CGG 0.522487 1_3:+34990089 None:intergenic
CGCAGCAACAGAGGAGACAA+AGG 0.527535 1_3:+34992383 None:intergenic
AAGCACTCACCAATATGTTC+GGG 0.527844 1_3:+34987136 None:intergenic
GCTGATAATGAATGTGATCA+TGG 0.528933 1_3:-34992157 Msa0116110:CDS
TGTAATTCACCAATTTCTGA+TGG 0.529410 1_3:+34987983 None:intergenic
TCTGTTGCAGTCCTGCATCA+AGG 0.530126 1_3:-34987179 Msa0116110:intron
TGAAGAACAAATGATTGAGA+AGG 0.530667 1_3:-34992714 Msa0116110:CDS
AAGAGGGAGCTACATGGTGA+TGG 0.531116 1_3:-34989394 Msa0116110:CDS
GTTGCTGCGAGCTCCGTGGT+GGG 0.531732 1_3:-34992369 Msa0116110:CDS
GATAAATGGTCTGATCATGA+AGG 0.531871 1_3:+34988742 None:intergenic
AGAGGGAGCTACATGGTGAT+GGG 0.532113 1_3:-34989393 Msa0116110:CDS
ATGGTTTCCTTGAACTGAGA+AGG 0.533086 1_3:-34992138 Msa0116110:CDS
GACGTTAGCGCCATGGTCGT+CGG 0.534128 1_3:+34987807 None:intergenic
AATCCGGTTGTGATTATTGG+TGG 0.534903 1_3:-34988032 Msa0116110:CDS
CAAACCAGCAGGAATGAAAA+CGG 0.534926 1_3:+34988542 None:intergenic
GCTACATGGTGATGGGGAGG+CGG 0.535164 1_3:-34989386 Msa0116110:CDS
TGTGTATTCTTTATAAGGCA+AGG 0.535177 1_3:+34990151 None:intergenic
TATGGATTTACTCAAAATCT+CGG 0.535793 1_3:-34990041 Msa0116110:CDS
TATAGGAATACCTCGTCTCC+TGG 0.539286 1_3:+34992682 None:intergenic
TATGCATGTTGGCGCCAAAA+CGG 0.540397 1_3:-34993776 Msa0116110:CDS
AACGGTGGTGTCGCTGTCGA+AGG 0.540573 1_3:-34993758 Msa0116110:CDS
TGTGTTATTGTGTATATCAT+CGG 0.540704 1_3:+34991988 None:intergenic
TTCGTGAGTGGTCAAGATCT+GGG 0.542666 1_3:-34992219 Msa0116110:CDS
CAATTGCATTCCTTTAAAGC+AGG 0.542700 1_3:-34989209 Msa0116110:intron
TCGGCGCCAACATTGGCCGT+AGG 0.543112 1_3:+34993934 None:intergenic
GCTCCCTCTTATCTTGCTCA+AGG 0.544578 1_3:+34989407 None:intergenic
ACTTGGTGAGGCAAACCAGC+AGG 0.547834 1_3:+34988531 None:intergenic
GCACCTTGAGCAAGATAAGA+GGG 0.549030 1_3:-34989410 Msa0116110:CDS
TTAGATGCACAAAATGCAAA+CGG 0.550175 1_3:-34993245 Msa0116110:CDS
TCCCAGAGAGCACCTTCTAA+GGG 0.550365 1_3:+34989304 None:intergenic
TCATCCAACCGTCTTAAATG+TGG 0.550657 1_3:+34992734 None:intergenic
AACTCAGAGATGCAATTTGG+AGG 0.551495 1_3:+34992109 None:intergenic
TGGTGTAGATCTACAGCCCT+TGG 0.555022 1_3:+34991917 None:intergenic
TCATTGTCTGAGGAATTGGT+TGG 0.558511 1_3:+34987952 None:intergenic
TTGACATTGATGGCACATTG+AGG 0.559359 1_3:+34993290 None:intergenic
GTGGCACAAGCTATCGGTGT+TGG 0.561909 1_3:-34993886 Msa0116110:CDS
TGTTGCTGCGAGCTCCGTGG+TGG 0.562600 1_3:-34992370 Msa0116110:CDS
ATATCCACCAATTCTTCACT+GGG 0.564592 1_3:-34990292 Msa0116110:CDS
TTCTCTAAGTATCTGCTGAA+AGG 0.564863 1_3:-34992764 Msa0116110:CDS
TTCAGATTTCTGACTTGGTG+AGG 0.565040 1_3:+34988519 None:intergenic
GACTTCTTCCACATTTAAGA+CGG 0.566290 1_3:-34992742 Msa0116110:CDS
AGAAATTGAAAAGATGAAGA+GGG 0.567266 1_3:-34993614 Msa0116110:CDS
TGTACCCAGTGAAGAATTGG+TGG 0.567688 1_3:+34990288 None:intergenic
ATTTGAAATTTCAATGGCGG+AGG 0.570807 1_3:-34994061 None:intergenic
AAGGTGATAACATTGCAGCT+AGG 0.571180 1_3:-34993717 Msa0116110:CDS
ACACAACCTACGGCCAATGT+TGG 0.573109 1_3:-34993940 Msa0116110:CDS
TGAAAATAAGTTCTTGTCGG+AGG 0.576918 1_3:+34987842 None:intergenic
CAAGATAAGAGGGAGCTACA+TGG 0.577423 1_3:-34989400 Msa0116110:CDS
ATGCACATCTGGTTTAAGCT+GGG 0.577804 1_3:-34991825 Msa0116110:CDS
CAACTCTCTGACACTAATGA+TGG 0.579184 1_3:-34989349 Msa0116110:CDS
CGCCGCCGCAGCTTTAGCAG+AGG 0.580166 1_3:+34993687 None:intergenic
CACGGAGCTCGCAGCAACAG+AGG 0.580415 1_3:+34992374 None:intergenic
GGAGCTACATGGTGATGGGG+AGG 0.581361 1_3:-34989389 Msa0116110:CDS
ACTATAGGAAATGAAGCGTA+AGG 0.584966 1_3:-34992816 Msa0116110:intron
GGTGACGTGGCACAAGCTAT+CGG 0.585670 1_3:-34993892 Msa0116110:CDS
ATAAATGGTCTGATCATGAA+GGG 0.587122 1_3:+34988743 None:intergenic
CATCATTAGTGTCAGAGAGT+TGG 0.587536 1_3:+34989350 None:intergenic
AATCAAGCTTCAAGATGTAG+AGG 0.589159 1_3:-34992056 Msa0116110:CDS
TATTGTGTAAAGCCTGACAT+GGG 0.589216 1_3:-34990083 Msa0116110:CDS
TGAAACCAACAACGAGGAGG+AGG 0.589775 1_3:-34992792 Msa0116110:CDS
AGTTCCTGAAATAAATCAGA+AGG 0.590173 1_3:+34990206 None:intergenic
AGATGTAACCTGACAAGGAA+CGG 0.590718 1_3:+34983214 None:intergenic
GAATGGGTTCATCTGGATCA+GGG 0.590909 1_3:+34993983 None:intergenic
CACTAATGATGGTGACCTGA+TGG 0.592137 1_3:-34989338 Msa0116110:CDS
TGGACAAGGAATGCTACCAT+CGG 0.593451 1_3:+34992183 None:intergenic
TCGTGATTCATGAACCACTC+TGG 0.593650 1_3:-34987894 Msa0116110:CDS
TGGCGCCGAAACGGTACCGT+TGG 0.594492 1_3:-34993920 Msa0116110:CDS
AATCAGCGAGAGTAATGCTA+AGG 0.594627 1_3:-34993425 Msa0116110:intron
GTTCCGGTGACGCAATTCGT+CGG 0.595552 1_3:+34987928 None:intergenic
TTGAGAAGGAAAGAGAAGCC+AGG 0.596035 1_3:-34992700 Msa0116110:CDS
GAAAGAGAAGCCAGGAGACG+AGG 0.596795 1_3:-34992692 Msa0116110:intron
AATGATGGTGACCTGATGGT+TGG 0.598278 1_3:-34989334 Msa0116110:CDS
AACTTCTGAATAAAAGTCCA+AGG 0.598579 1_3:+34988573 None:intergenic
CCGGTTGTGATTATTGGTGG+CGG 0.600774 1_3:-34988029 Msa0116110:CDS
ATTCGTCGGTTCATTGTCTG+AGG 0.606379 1_3:+34987942 None:intergenic
AGAAAGTGTATCACATGCAG+AGG 0.606509 1_3:-34992254 Msa0116110:CDS
CACCTAGAAGCTTCCCACCA+CGG 0.608942 1_3:+34992356 None:intergenic
TCATCGAGAAACACAACCTA+CGG 0.610549 1_3:-34993950 Msa0116110:CDS
GGGTTCATCTGGATCAGGGA+GGG 0.610921 1_3:+34993987 None:intergenic
TGTGATTTATCGGAAGCTTG+CGG 0.611620 1_3:+34987095 None:intergenic
GGAAGAAACTGGTAAAGATG+TGG 0.613492 1_3:-34993560 Msa0116110:CDS
GAAACGGTACCGTTGGAGGA+TGG 0.613747 1_3:-34993913 Msa0116110:CDS
TTATTGTGTAAAGCCTGACA+TGG 0.616770 1_3:-34990084 Msa0116110:CDS
CTCTGTTGCTGCGAGCTCCG+TGG 0.620459 1_3:-34992373 Msa0116110:CDS
TCGCTGTCGAAGGACGATGA+AGG 0.626327 1_3:-34993748 Msa0116110:CDS
TCCTGAAATAAATCAGAAGG+AGG 0.633909 1_3:+34990209 None:intergenic
ATATGAGATGTAACCTGACA+AGG 0.636211 1_3:+34983209 None:intergenic
TATACACAATAACACAAGGA+AGG 0.636388 1_3:-34991981 Msa0116110:CDS
ATCCTCTGCTAAAGCTGCGG+CGG 0.638471 1_3:-34993689 Msa0116110:CDS
TCACCAAGTCAGAAATCTGA+AGG 0.640211 1_3:-34988517 Msa0116110:intron
AGTTTCAGAACCGACGACCA+TGG 0.642281 1_3:-34987817 Msa0116110:CDS
CGTACATGCTATGCTTGATG+TGG 0.642539 1_3:-34986439 Msa0116110:CDS
AACCTCAAACTTGTCCGCAG+CGG 0.644100 1_3:+34987069 None:intergenic
AATGCACGCCACATGACTAG+TGG 0.646851 1_3:+34991800 None:intergenic
ACCGTTGGAGGATGGTGACG+TGG 0.648574 1_3:-34993905 Msa0116110:CDS
GGTAAAGATGTGGTAGCTGG+AGG 0.648889 1_3:-34993550 Msa0116110:CDS
GAGGTTTATTGTGATGTCAG+CGG 0.649113 1_3:+34987861 None:intergenic
CAAGGAACGGCAAATAAGAG+AGG 0.650805 1_3:+34983227 None:intergenic
TTCATCCTCTGCTAAAGCTG+CGG 0.652304 1_3:-34993692 Msa0116110:CDS
TCATCTTTAGAATAATCCGC+CGG 0.653440 1_3:+34992561 None:intergenic
GAGGGAGCTACATGGTGATG+GGG 0.656552 1_3:-34989392 Msa0116110:CDS
CGTGGTGGGAAGCTTCTAGG+TGG 0.658159 1_3:-34992355 Msa0116110:CDS
TAATTGTTTAGATTGGTGTG+AGG 0.659042 1_3:-34991726 Msa0116110:intron
TAAATGGTCTGATCATGAAG+GGG 0.660847 1_3:+34988744 None:intergenic
GCGGCGGCGATAATGAAATG+CGG 0.661761 1_3:-34993673 Msa0116110:CDS
AAAGCTAAATATAAAACCGG+CGG 0.661902 1_3:-34992577 Msa0116110:CDS
TGAGTGCTTCCGTTTGACAG+AGG 0.665002 1_3:-34987122 Msa0116110:CDS
GCCACGTCACCATCCTCCAA+CGG 0.665173 1_3:+34993904 None:intergenic
AATCCGGCAACTTCACAGCA+AGG 0.666731 1_3:+34990105 None:intergenic
TAAAGTGGAACTAAAACCTG+AGG 0.669552 1_3:-34989464 Msa0116110:CDS
CGATTGGCTTAAATGGCCTG+AGG 0.670626 1_3:-34990252 Msa0116110:CDS
GGGTGGCATGCAAATGCCGA+TGG 0.671435 1_3:-34992199 Msa0116110:CDS
GCTGGGAACCACTAGTCATG+TGG 0.677762 1_3:-34991808 Msa0116110:CDS
ATGAGTCTACGATTCGTGAG+TGG 0.678627 1_3:-34992231 Msa0116110:CDS
ACGCGGCAGAAAGAGAAAGG+CGG 0.678843 1_3:-34993497 Msa0116110:CDS
TGGGTTCATCTGGATCAGGG+AGG 0.685323 1_3:+34993986 None:intergenic
TCAATGTCAAAGAAATGACA+GGG 0.687101 1_3:-34993277 Msa0116110:CDS
TTTACTCAAAATCTCGGACG+CGG 0.689301 1_3:-34990035 Msa0116110:CDS
ATGAACTCAGCATGATGACG+AGG 0.692646 1_3:+34990179 None:intergenic
ATTGTGTAAAGCCTGACATG+GGG 0.693819 1_3:-34990082 Msa0116110:CDS
GTGGTTCATGAATCACGACA+TGG 0.695942 1_3:+34987899 None:intergenic
CTGCATCAGACACATCACAA+TGG 0.698372 1_3:+34989994 None:intergenic
GGTCGCAATTATCTACATGG+TGG 0.698999 1_3:-34992298 Msa0116110:CDS
GGCTGAAACCAACAACGAGG+AGG 0.705772 1_3:-34992795 Msa0116110:CDS
TGGTGACCTGATGGTTGGAG+AGG 0.707195 1_3:-34989329 Msa0116110:CDS
ATGATATACACAATAACACA+AGG 0.707929 1_3:-34991985 Msa0116110:CDS
GGACGATGAACGTGATGACG+TGG 0.712626 1_3:-34993842 Msa0116110:CDS
AAATGGTCTGATCATGAAGG+GGG 0.713662 1_3:+34988745 None:intergenic
GCATGTTGGCGCCAAAACGG+TGG 0.714446 1_3:-34993773 Msa0116110:CDS
AGGGCTGTAGATCTACACCA+TGG 0.722496 1_3:-34991914 Msa0116110:CDS
GCGGCGAATAGGGTCCAGAG+TGG 0.740679 1_3:+34987880 None:intergenic
CAACTGGTGAGAAAGAGACG+CGG 0.745058 1_3:-34993514 Msa0116110:CDS
GATAAATCACAGATCCGCTG+CGG 0.750646 1_3:-34987083 Msa0116110:CDS
CGATGAACGTGATGACGTGG+TGG 0.763971 1_3:-34993839 Msa0116110:CDS
TCAATGGCACTGGAGCAAAG+GGG 0.769506 1_3:-34991876 Msa0116110:CDS
GTGAGTGGTCAAGATCTGGG+TGG 0.773278 1_3:-34992216 Msa0116110:CDS
TAAGGCTGAAACCAACAACG+AGG 0.802053 1_3:-34992798 Msa0116110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATAATTTATTTATTTT+TGG + chr1_3:34986534-34986553 None:intergenic 0.0%
!!! TTCATTTTATAATTTGATTT+TGG - chr1_3:34984602-34984621 Msa0116110:intron 10.0%
!!! TCATTTTATAATTTGATTTT+GGG - chr1_3:34984603-34984622 Msa0116110:intron 10.0%
!!! AACATATTTATTTTTTTAAC+TGG - chr1_3:34985744-34985763 Msa0116110:intron 10.0%
!! ATAATATTCTAATATTATGT+TGG + chr1_3:34990358-34990377 None:intergenic 10.0%
!!! ATAATCTTTACTTATATTTT+TGG - chr1_3:34992047-34992066 Msa0116110:CDS 10.0%
!! TCACAATTGAAATAAAATTA+TGG - chr1_3:34986330-34986349 Msa0116110:intron 15.0%
!! TTATATAAATATGTATATGC+TGG - chr1_3:34986558-34986577 Msa0116110:intron 15.0%
!! AAATAAACAGATAAATGAAA+TGG + chr1_3:34987415-34987434 None:intergenic 15.0%
!!! TTTTTTGTAATTTTGCTATA+AGG - chr1_3:34987720-34987739 Msa0116110:intron 15.0%
!! ACTAAAATTTGTATTACAAT+TGG + chr1_3:34989109-34989128 None:intergenic 15.0%
!!! AGATTGTTTAGTATTTTTTA+TGG - chr1_3:34989834-34989853 Msa0116110:intron 15.0%
!! TACAAAATATATCAAAAAGT+TGG + chr1_3:34989860-34989879 None:intergenic 15.0%
!!! ATATATTTTGTAACTTTACA+AGG - chr1_3:34989868-34989887 Msa0116110:intron 15.0%
!!! TTTTACTTTTCCTATATATA+AGG - chr1_3:34990208-34990227 Msa0116110:CDS 15.0%
!! ATGAAAATAACTAAGTAATA+TGG - chr1_3:34990271-34990290 Msa0116110:CDS 15.0%
!!! AATATTTTAGTTTATCTCAT+AGG + chr1_3:34990335-34990354 None:intergenic 15.0%
!! AACATTGGATAAAAATAAAA+AGG - chr1_3:34991596-34991615 Msa0116110:intron 15.0%
!! ATTACTTTGTAAACTAATTA+AGG + chr1_3:34992295-34992314 None:intergenic 15.0%
!!! ATATGTAACTAAATCTTTTT+AGG - chr1_3:34992595-34992614 Msa0116110:intron 15.0%
!! TTAGGAATAATTTATTTCAA+AGG - chr1_3:34992717-34992736 Msa0116110:CDS 15.0%
!! AATATCCAACATAATAAATA+GGG - chr1_3:34993419-34993438 Msa0116110:intron 15.0%
!! AATAAAATACAAGAGTTAAA+AGG + chr1_3:34993532-34993551 None:intergenic 15.0%
!!! TCAGATTTTATAATTTGAAT+AGG - chr1_3:34993741-34993760 Msa0116110:CDS 15.0%
!!! CAGATTTTATAATTTGAATA+GGG - chr1_3:34993742-34993761 Msa0116110:CDS 15.0%
!!! TTAATTTTTTTGTCTCATTT+TGG - chr1_3:34993864-34993883 Msa0116110:CDS 15.0%
!! TAGATTTCAAATATAGACTA+CGG + chr1_3:34984381-34984400 None:intergenic 20.0%
!!! ATATTTGAAATCTATCCATT+TGG - chr1_3:34984387-34984406 Msa0116110:intron 20.0%
!!! GAGATTTAAAACATTTTCAA+TGG - chr1_3:34985337-34985356 Msa0116110:intron 20.0%
!!! AATCCAAATTTTAAGAATGT+CGG + chr1_3:34985621-34985640 None:intergenic 20.0%
!! TCATTTATAAACATAGTTTG+AGG - chr1_3:34985690-34985709 Msa0116110:intron 20.0%
!! AATAGATAAATTGAATGAAG+AGG + chr1_3:34986086-34986105 None:intergenic 20.0%
!! TCTTCATTCAATTTATCTAT+TGG - chr1_3:34986085-34986104 Msa0116110:intron 20.0%
!! TTTGACTGTTATTATGTATT+AGG - chr1_3:34986112-34986131 Msa0116110:intron 20.0%
!! TTGACTGTTATTATGTATTA+GGG - chr1_3:34986113-34986132 Msa0116110:intron 20.0%
!!! TATTGTATTAGGTAGTTTTT+AGG - chr1_3:34986463-34986482 Msa0116110:intron 20.0%
!! TATTACCTGCAAATTTAAAT+GGG + chr1_3:34986613-34986632 None:intergenic 20.0%
!!! TCAAAACCTTTTTATATTTC+TGG - chr1_3:34987264-34987283 Msa0116110:intron 20.0%
!!! ATTTGTGTTTTTTTTACGAA+AGG - chr1_3:34987312-34987331 Msa0116110:intron 20.0%
!! TCAAATGAAGAAATTATCTA+TGG + chr1_3:34987500-34987519 None:intergenic 20.0%
!!! ATTTGATTTGTTATTTCTCT+TGG - chr1_3:34987514-34987533 Msa0116110:intron 20.0%
!!! ATAAACTGCAAAGTATTTTT+AGG - chr1_3:34987586-34987605 Msa0116110:intron 20.0%
!! CTCATAATAAAATATTCACT+TGG + chr1_3:34987682-34987701 None:intergenic 20.0%
!!! CAAGTGAATATTTTATTATG+AGG - chr1_3:34987680-34987699 Msa0116110:intron 20.0%
!! TCTAGATATTCTTTCAATTT+GGG + chr1_3:34987973-34987992 None:intergenic 20.0%
!! TGTAAACTTCAAATTTGATA+CGG + chr1_3:34988404-34988423 None:intergenic 20.0%
!!! TATCAAATTTGAAGTTTACA+AGG - chr1_3:34988404-34988423 Msa0116110:intron 20.0%
!!! CTTGTAATCTTGTTTTAATT+GGG + chr1_3:34988788-34988807 None:intergenic 20.0%
!!! TCTTGTAATCTTGTTTTAAT+TGG + chr1_3:34988789-34988808 None:intergenic 20.0%
!! TTGTCCAAAATTTATTTACA+TGG - chr1_3:34989654-34989673 Msa0116110:intron 20.0%
!!! TGTACCATGTAAATAAATTT+TGG + chr1_3:34989661-34989680 None:intergenic 20.0%
!! AATTTACTACCTATTCAATA+GGG + chr1_3:34990250-34990269 None:intergenic 20.0%
!! TTCTTTATAACAAAACAGAA+AGG - chr1_3:34991155-34991174 Msa0116110:intron 20.0%
!! AATATAATTCACCAGAATAT+AGG + chr1_3:34991490-34991509 None:intergenic 20.0%
!! TATATTCTGGTGAATTATAT+TGG - chr1_3:34991489-34991508 Msa0116110:intron 20.0%
!! TAGTTATATCTTTCATTTGA+AGG - chr1_3:34991571-34991590 Msa0116110:intron 20.0%
!!! AATCAAACATGATTTGTTTT+TGG + chr1_3:34991702-34991721 None:intergenic 20.0%
!!! AAACAAATCATGTTTGATTT+AGG - chr1_3:34991703-34991722 Msa0116110:intron 20.0%
!! TTGTAAACTAATTAAGGAAT+TGG + chr1_3:34992289-34992308 None:intergenic 20.0%
!! TAACTCTAGATTATATACTT+AGG - chr1_3:34992744-34992763 Msa0116110:CDS 20.0%
!! GAATATCCAACATAATAAAT+AGG - chr1_3:34993418-34993437 Msa0116110:intron 20.0%
!! ATATCCAACATAATAAATAG+GGG - chr1_3:34993420-34993439 Msa0116110:intron 20.0%
! AGAAATTGAAAAGATGAAGA+GGG - chr1_3:34983615-34983634 Msa0116110:intron 25.0%
! TCTGCTCATTTATATATGTT+TGG - chr1_3:34983847-34983866 Msa0116110:intron 25.0%
! CTGCTCATTTATATATGTTT+GGG - chr1_3:34983848-34983867 Msa0116110:intron 25.0%
!! CATTTATATATGTTTGGGTT+TGG - chr1_3:34983853-34983872 Msa0116110:intron 25.0%
!!! TTAATCAACAGTGTTTTGAA+GGG - chr1_3:34983912-34983931 Msa0116110:intron 25.0%
! ACAAAGTAAAACAGAAGTTA+AGG + chr1_3:34984051-34984070 None:intergenic 25.0%
!!! AATATGCCTTGTTTGATAAT+TGG - chr1_3:34984118-34984137 Msa0116110:intron 25.0%
!!! ATATGCCTTGTTTGATAATT+GGG - chr1_3:34984119-34984138 Msa0116110:intron 25.0%
! TGTAATATGTGCAATAACTT+CGG + chr1_3:34984152-34984171 None:intergenic 25.0%
! TATTGCACATATTACATGTT+TGG - chr1_3:34984156-34984175 Msa0116110:intron 25.0%
!! CATATTACATGTTTGGATTT+TGG - chr1_3:34984163-34984182 Msa0116110:intron 25.0%
! ATATCACTCTCTTTCAATTT+AGG + chr1_3:34984241-34984260 None:intergenic 25.0%
! ATTTCCTATAGTAAACCAAA+TGG + chr1_3:34984405-34984424 None:intergenic 25.0%
! CTCAAAGCTAAATATAAAAC+CGG - chr1_3:34984649-34984668 Msa0116110:intron 25.0%
! AAATCATACTCAAGCTTAAT+TGG + chr1_3:34984907-34984926 None:intergenic 25.0%
!! TGTGTTATTGTGTATATCAT+CGG + chr1_3:34985244-34985263 None:intergenic 25.0%
! ATGATATACACAATAACACA+AGG - chr1_3:34985244-34985263 Msa0116110:intron 25.0%
!! ACAAATTTTTATACTGTCCA+AGG - chr1_3:34985295-34985314 Msa0116110:intron 25.0%
!! CAAATTTTTATACTGTCCAA+GGG - chr1_3:34985296-34985315 Msa0116110:intron 25.0%
!!! GAAAATGTTTTAAATCTCCA+TGG + chr1_3:34985335-34985354 None:intergenic 25.0%
! TAACCGACATTCTTAAAATT+TGG - chr1_3:34985615-34985634 Msa0116110:intron 25.0%
! TACTGTTGAAATACAACATT+AGG - chr1_3:34985825-34985844 Msa0116110:intron 25.0%
! ACTGTTGAAATACAACATTA+GGG - chr1_3:34985826-34985845 Msa0116110:intron 25.0%
!! TATCTAAATTTCTTGCTATC+TGG - chr1_3:34986008-34986027 Msa0116110:intron 25.0%
! ATGTGATGCAAAAACAAATT+GGG + chr1_3:34986037-34986056 None:intergenic 25.0%
! TATGTGATGCAAAAACAAAT+TGG + chr1_3:34986038-34986057 None:intergenic 25.0%
!!! ACGAGTATTTTTTACAAACA+CGG + chr1_3:34986189-34986208 None:intergenic 25.0%
!!! ACAATTTTTGAAGGATGTTT+TGG + chr1_3:34986422-34986441 None:intergenic 25.0%
!! TGTTGGTATACAATTTTTGA+AGG + chr1_3:34986431-34986450 None:intergenic 25.0%
! AAAAATTGTATACCAACAGA+GGG - chr1_3:34986433-34986452 Msa0116110:CDS 25.0%
! GTATTACCTGCAAATTTAAA+TGG + chr1_3:34986614-34986633 None:intergenic 25.0%
! GGATTTGTGTATTCTTTATA+AGG + chr1_3:34987086-34987105 None:intergenic 25.0%
! TATGGATTTACTCAAAATCT+CGG - chr1_3:34987188-34987207 Msa0116110:intron 25.0%
! AACATGCCAGAAATATAAAA+AGG + chr1_3:34987273-34987292 None:intergenic 25.0%
!! TAAAGAAGTGCATAATTTGT+AGG - chr1_3:34987365-34987384 Msa0116110:intron 25.0%
! CTCTAGATATTCTTTCAATT+TGG + chr1_3:34987974-34987993 None:intergenic 25.0%
! TCCAAAAGTTACAAAAAACA+GGG + chr1_3:34988139-34988158 None:intergenic 25.0%
!!! TGTTTTTTGTAACTTTTGGA+GGG - chr1_3:34988139-34988158 Msa0116110:intron 25.0%
! TGTGTATTTGAATCTTAACT+CGG + chr1_3:34988200-34988219 None:intergenic 25.0%
! AACATAATATAAAGTCTGAC+TGG - chr1_3:34988241-34988260 Msa0116110:intron 25.0%
!!! CTGACTGGTTTATTAATTTA+CGG - chr1_3:34988256-34988275 Msa0116110:intron 25.0%
! ACTGTAATCATAGTAATGAA+AGG + chr1_3:34988283-34988302 None:intergenic 25.0%
! ATTCAAGAAAATAAACAGCA+AGG + chr1_3:34988434-34988453 None:intergenic 25.0%
! ATGAAACTTAAGAAAGAGTA+TGG - chr1_3:34988527-34988546 Msa0116110:CDS 25.0%
!!! GACTAGTTTGATCATTTAAA+TGG - chr1_3:34988590-34988609 Msa0116110:intron 25.0%
! AGAAATTGGTGAATTACAAA+CGG - chr1_3:34989251-34989270 Msa0116110:CDS 25.0%
! TGTTGAAAATAAGTTCTTGT+CGG + chr1_3:34989393-34989412 None:intergenic 25.0%
! ATCTCAAACATTATGAGAAA+AGG - chr1_3:34989479-34989498 Msa0116110:CDS 25.0%
! TCTCAAACATTATGAGAAAA+GGG - chr1_3:34989480-34989499 Msa0116110:CDS 25.0%
! GTTAAAATGTGGTGATTAAA+TGG - chr1_3:34989569-34989588 Msa0116110:intron 25.0%
!! AACGTCTATAAAATTTTGCT+TGG - chr1_3:34989708-34989727 Msa0116110:intron 25.0%
! TACAAGGCTAAAATTGAATT+TGG - chr1_3:34989884-34989903 Msa0116110:intron 25.0%
!! AGTCTTGTATCCTTATATAT+AGG + chr1_3:34990221-34990240 None:intergenic 25.0%
! GAATTTACTACCTATTCAAT+AGG + chr1_3:34990251-34990270 None:intergenic 25.0%
! TCATGTCAACAATTTCTTAT+TGG - chr1_3:34990553-34990572 Msa0116110:intron 25.0%
! CATGTCAACAATTTCTTATT+GGG - chr1_3:34990554-34990573 Msa0116110:intron 25.0%
!!! TTTATGTACTGTTTTTTTCC+TGG - chr1_3:34990579-34990598 Msa0116110:intron 25.0%
! AAGATTTCATACATTCAACA+AGG + chr1_3:34990645-34990664 None:intergenic 25.0%
! TTGTTGAATGTATGAAATCT+TGG - chr1_3:34990644-34990663 Msa0116110:intron 25.0%
! TCATGTCAACAATTTCTTAT+TGG - chr1_3:34990553-34990572 Msa0116110:intron 25.0%
! CATGTCAACAATTTCTTATT+GGG - chr1_3:34990554-34990573 Msa0116110:intron 25.0%
! TTGAAAAATTAGAGAAAGCA+AGG - chr1_3:34990813-34990832 Msa0116110:intron 25.0%
! ATGATTGCCATTAAATTTAC+AGG - chr1_3:34991023-34991042 Msa0116110:intron 25.0%
! ATTTATTGAGTCACTTGATT+AGG - chr1_3:34991116-34991135 Msa0116110:intron 25.0%
!!! GTTCCATATTTTGTTTTAAC+CGG - chr1_3:34991177-34991196 Msa0116110:intron 25.0%
! TATGTAGTGAACAAAATATC+AGG - chr1_3:34991526-34991545 Msa0116110:intron 25.0%
! TTTCATTTGAAGGAAAACAT+TGG - chr1_3:34991581-34991600 Msa0116110:intron 25.0%
!! ATTTCATATTCCCAGTTTTT+GGG + chr1_3:34991909-34991928 None:intergenic 25.0%
! TTCAAATGACTAGATAAATG+GGG + chr1_3:34991994-34992013 None:intergenic 25.0%
! CTTCAAATGACTAGATAAAT+GGG + chr1_3:34991995-34992014 None:intergenic 25.0%
! ACTTCAAATGACTAGATAAA+TGG + chr1_3:34991996-34992015 None:intergenic 25.0%
!! TTTTCCAATTACATTCACTT+TGG - chr1_3:34992320-34992339 Msa0116110:CDS 25.0%
!!! TATATTCTCCTTGTTTTTCT+AGG - chr1_3:34992531-34992550 Msa0116110:intron 25.0%
! AAACATATCCTAGAAAAACA+AGG + chr1_3:34992542-34992561 None:intergenic 25.0%
!!! GTTCGCTAATAAGTTTTATT+AGG - chr1_3:34992699-34992718 Msa0116110:CDS 25.0%
! ATGTAACTAGTTAGTGATTA+AGG - chr1_3:34992958-34992977 Msa0116110:intron 25.0%
!!! ATGTCGCGTTTATTTATTTT+AGG + chr1_3:34993388-34993407 None:intergenic 25.0%
! TATCCAACATAATAAATAGG+GGG - chr1_3:34993421-34993440 Msa0116110:intron 25.0%
! CTACTTATCACTTTATTACT+TGG - chr1_3:34993616-34993635 Msa0116110:CDS 25.0%
! TTATTACTTGGTAAACGATT+TGG - chr1_3:34993628-34993647 Msa0116110:CDS 25.0%
!!! AATGTTTTAACGTCTTTTTG+TGG + chr1_3:34993721-34993740 None:intergenic 25.0%
! TAAATATGTTACAACTTCGA+GGG - chr1_3:34993814-34993833 Msa0116110:CDS 25.0%
! AATAAGAGAGGAAAAAATTG+TGG + chr1_3:34993993-34994012 None:intergenic 25.0%
! GTTACATCTCATATCAAATT+TGG - chr1_3:34994029-34994048 Msa0116110:CDS 25.0%
!!! ATATCTTGTTTTTCTCGATC+AGG + chr1_3:34983436-34983455 None:intergenic 30.0%
GAAAAACAAGATATGCATGT+TGG - chr1_3:34983442-34983461 Msa0116110:intron 30.0%
CAGAAATTGAAAAGATGAAG+AGG - chr1_3:34983614-34983633 Msa0116110:intron 30.0%
AACAGAATAAAGGAAGAAAC+TGG - chr1_3:34983658-34983677 Msa0116110:intron 30.0%
!! CTTAATCAACAGTGTTTTGA+AGG - chr1_3:34983911-34983930 Msa0116110:intron 30.0%
!!! TAATCAACAGTGTTTTGAAG+GGG - chr1_3:34983913-34983932 Msa0116110:intron 30.0%
! TGTCATTTCTTTGACATTGA+TGG + chr1_3:34983952-34983971 None:intergenic 30.0%
ATCAATGTCAAAGAAATGAC+AGG - chr1_3:34983951-34983970 Msa0116110:intron 30.0%
TCAATGTCAAAGAAATGACA+GGG - chr1_3:34983952-34983971 Msa0116110:intron 30.0%
TTAGATGCACAAAATGCAAA+CGG - chr1_3:34983984-34984003 Msa0116110:intron 30.0%
GCACATCATGTATACAAAAT+TGG - chr1_3:34984017-34984036 Msa0116110:intron 30.0%
TACATCCCAATTATCAAACA+AGG + chr1_3:34984127-34984146 None:intergenic 30.0%
!!! TTTTTTGTTGCCTTTTGCTA+AGG - chr1_3:34984212-34984231 Msa0116110:intron 30.0%
! ATTTAGGATACCTTAGCAAA+AGG + chr1_3:34984225-34984244 None:intergenic 30.0%
AAGAATAGTTAATCGTGGAA+GGG + chr1_3:34984349-34984368 None:intergenic 30.0%
ATCAGAAGAATAGTTAATCG+TGG + chr1_3:34984354-34984373 None:intergenic 30.0%
! CTATCCATTTGGTTTACTAT+AGG - chr1_3:34984398-34984417 Msa0116110:intron 30.0%
TGAAGAACAAATGATTGAGA+AGG - chr1_3:34984515-34984534 Msa0116110:intron 30.0%
! CAAATTTTCTCCGACTATAT+AGG + chr1_3:34984567-34984586 None:intergenic 30.0%
!!! ATTTTGGGATGTGAATTACA+GGG - chr1_3:34984618-34984637 Msa0116110:intron 30.0%
AAAGCTAAATATAAAACCGG+CGG - chr1_3:34984652-34984671 Msa0116110:intron 30.0%
! TCACATTCATTATCAGCTTT+TGG + chr1_3:34985069-34985088 None:intergenic 30.0%
TATACACAATAACACAAGGA+AGG - chr1_3:34985248-34985267 Msa0116110:intron 30.0%
! TAAAACATTTTCAATGGCAC+TGG - chr1_3:34985343-34985362 Msa0116110:intron 30.0%
! ATTTGGAGTTGGTTATTTGA+CGG + chr1_3:34985455-34985474 None:intergenic 30.0%
ATCCAAAACTACATCGTATT+TGG + chr1_3:34985472-34985491 None:intergenic 30.0%
AGGCAGTTAATTGTTTAGAT+TGG - chr1_3:34985496-34985515 Msa0116110:intron 30.0%
TAATTGTTTAGATTGGTGTG+AGG - chr1_3:34985503-34985522 Msa0116110:intron 30.0%
TGATTTCTCAATCCTTATGA+TGG - chr1_3:34985532-34985551 Msa0116110:intron 30.0%
TTAGAAACAAGTTTCACACA+TGG + chr1_3:34985589-34985608 None:intergenic 30.0%
CAAGATATTGAATGAGAAGT+AGG + chr1_3:34985973-34985992 None:intergenic 30.0%
TGCAATGACAACAATTAATC+TGG + chr1_3:34986062-34986081 None:intergenic 30.0%
CTGTTATTATGTATTAGGGA+TGG - chr1_3:34986117-34986136 Msa0116110:intron 30.0%
!!! TTTTTTACAAACACGGGTAT+GGG + chr1_3:34986182-34986201 None:intergenic 30.0%
!!! ATTTTTTACAAACACGGGTA+TGG + chr1_3:34986183-34986202 None:intergenic 30.0%
!!! CGAGTATTTTTTACAAACAC+GGG + chr1_3:34986188-34986207 None:intergenic 30.0%
TACCTATAGGTTATGAGAAA+GGG + chr1_3:34986249-34986268 None:intergenic 30.0%
! TCTTTTCATAGTTAAAGTGC+GGG + chr1_3:34986299-34986318 None:intergenic 30.0%
! GTCTTTTCATAGTTAAAGTG+CGG + chr1_3:34986300-34986319 None:intergenic 30.0%
CAAAAATTGTATACCAACAG+AGG - chr1_3:34986432-34986451 Msa0116110:CDS 30.0%
AAAATTGTATACCAACAGAG+GGG - chr1_3:34986434-34986453 Msa0116110:CDS 30.0%
! AAATATGTATATGCTGGTTG+CGG - chr1_3:34986564-34986583 Msa0116110:intron 30.0%
CTGCAAATTTAAATGGGTAA+GGG + chr1_3:34986607-34986626 None:intergenic 30.0%
TTAAATTTGCAGGTAATACC+CGG - chr1_3:34986615-34986634 Msa0116110:intron 30.0%
TGGACAAAGAAAATTCAACA+AGG + chr1_3:34986792-34986811 None:intergenic 30.0%
AGCAACAGAATATCAAGTAA+AGG + chr1_3:34986865-34986884 None:intergenic 30.0%
TTTACTTGATATTCTGTTGC+TGG - chr1_3:34986864-34986883 Msa0116110:intron 30.0%
!! AGGTGTTGAAATTGAAAGAT+TGG - chr1_3:34986997-34987016 Msa0116110:intron 30.0%
AGTTCCTGAAATAAATCAGA+AGG + chr1_3:34987026-34987045 None:intergenic 30.0%
TGTGTATTCTTTATAAGGCA+AGG + chr1_3:34987081-34987100 None:intergenic 30.0%
! GAATACACAAATCCTTTTAG+TGG - chr1_3:34987092-34987111 Msa0116110:CDS 30.0%
CCATAAGCAATATATGTTCT+TGG + chr1_3:34987173-34987192 None:intergenic 30.0%
CCAAGAACATATATTGCTTA+TGG - chr1_3:34987170-34987189 Msa0116110:CDS 30.0%
! AGTGTTCTTTTTATGACTAG+TGG - chr1_3:34987562-34987581 Msa0116110:intron 30.0%
TTAATGACACTAATTTCCTC+AGG + chr1_3:34987784-34987803 None:intergenic 30.0%
!!! TTTTCCATTATCTAGCTCTA+TGG - chr1_3:34988061-34988080 Msa0116110:intron 30.0%
!!! TCCCTGTTTTTTGTAACTTT+TGG - chr1_3:34988135-34988154 Msa0116110:intron 30.0%
CTCCAAAAGTTACAAAAAAC+AGG + chr1_3:34988140-34988159 None:intergenic 30.0%
!!! CTGTTTTTTGTAACTTTTGG+AGG - chr1_3:34988138-34988157 Msa0116110:intron 30.0%
TTCTTGAATGAGATATCCTT+TGG - chr1_3:34988445-34988464 Msa0116110:intron 30.0%
TCAATAACCTACATTACCAA+AGG + chr1_3:34988464-34988483 None:intergenic 30.0%
ATAAATGGTCTGATCATGAA+GGG + chr1_3:34988489-34988508 None:intergenic 30.0%
TCAGACCATTTATCTGAATA+TGG - chr1_3:34988496-34988515 Msa0116110:intron 30.0%
ATGCTCCATATTCAGATAAA+TGG + chr1_3:34988504-34988523 None:intergenic 30.0%
ATGTTGAAATGTCAACAAAG+TGG + chr1_3:34988618-34988637 None:intergenic 30.0%
!! ACATTTCAACATTGACTTGT+AGG - chr1_3:34988626-34988645 Msa0116110:intron 30.0%
AACTTCTGAATAAAAGTCCA+AGG + chr1_3:34988659-34988678 None:intergenic 30.0%
! TTGGACTTTTATTCAGAAGT+TGG - chr1_3:34988658-34988677 Msa0116110:intron 30.0%
! TGGACTTTTATTCAGAAGTT+GGG - chr1_3:34988659-34988678 Msa0116110:intron 30.0%
AACAGTATCTATGATACTGT+AGG + chr1_3:34988756-34988775 None:intergenic 30.0%
! AAGCTGATGACGTTAAAATT+GGG + chr1_3:34988831-34988850 None:intergenic 30.0%
! AAAGCTGATGACGTTAAAAT+TGG + chr1_3:34988832-34988851 None:intergenic 30.0%
GAGTCACTTAAAAGAAAGAT+TGG + chr1_3:34988985-34989004 None:intergenic 30.0%
!! TTTAGTAGCTTTGATTTGAG+TGG + chr1_3:34989026-34989045 None:intergenic 30.0%
TGTAATTCACCAATTTCTGA+TGG + chr1_3:34989249-34989268 None:intergenic 30.0%
!! TACTACTAGTCTTACAATCA+TGG + chr1_3:34989458-34989477 None:intergenic 30.0%
AACAGAGAGAAAACCAAAAA+CGG - chr1_3:34989534-34989553 Msa0116110:intron 30.0%
AACCAAAAACGGAAATCAAA+CGG - chr1_3:34989545-34989564 Msa0116110:intron 30.0%
! AATCAAACGGTGTTAAAATG+TGG - chr1_3:34989558-34989577 Msa0116110:intron 30.0%
!!! TACGTGTGTCTTGTTTTAAT+TGG - chr1_3:34989592-34989611 Msa0116110:intron 30.0%
!!! ACGTGTGTCTTGTTTTAATT+GGG - chr1_3:34989593-34989612 Msa0116110:intron 30.0%
! TGTGTTTTATCTCTTATCCT+TGG - chr1_3:34989787-34989806 Msa0116110:intron 30.0%
AAAAGTGAGTTTGTGATGTA+TGG + chr1_3:34989963-34989982 None:intergenic 30.0%
TCAAATCAATGAAAGTAGTC+TGG + chr1_3:34990188-34990207 None:intergenic 30.0%
ACTCTTAATCCCTATTGAAT+AGG - chr1_3:34990238-34990257 Msa0116110:CDS 30.0%
!! ATCTCATAGGATTAGTTTCT+TGG + chr1_3:34990322-34990341 None:intergenic 30.0%
AAGATTTCATACACTCAACA+AGG + chr1_3:34990490-34990509 None:intergenic 30.0%
CAATAAATTACACTCCCAAA+TGG + chr1_3:34991104-34991123 None:intergenic 30.0%
! TGATTAGGTTTGGTAATCTT+TGG - chr1_3:34991131-34991150 Msa0116110:intron 30.0%
! GATTAGGTTTGGTAATCTTT+GGG - chr1_3:34991132-34991151 Msa0116110:intron 30.0%
! TCATAACTTGTATGTACCTA+TGG - chr1_3:34991248-34991267 Msa0116110:intron 30.0%
!! ATCAGGTTGATTCAAGTATA+TGG - chr1_3:34991279-34991298 Msa0116110:intron 30.0%
!! TCAGGTTGATTCAAGTATAT+GGG - chr1_3:34991280-34991299 Msa0116110:intron 30.0%
! CAGCATGTTTTGTAAAATGT+GGG - chr1_3:34991379-34991398 Msa0116110:intron 30.0%
!!! GTAATGTATGTTTTAGTAGC+AGG + chr1_3:34991422-34991441 None:intergenic 30.0%
GCTACTAAAACATACATTAC+TGG - chr1_3:34991422-34991441 Msa0116110:intron 30.0%
ATTCACCAGAATATAGGATA+GGG + chr1_3:34991484-34991503 None:intergenic 30.0%
AATTCACCAGAATATAGGAT+AGG + chr1_3:34991485-34991504 None:intergenic 30.0%
AACAAAGTTTATCTCGCTAT+AGG + chr1_3:34991624-34991643 None:intergenic 30.0%
TGTCTTGTGATCTAAACATA+GGG + chr1_3:34991667-34991686 None:intergenic 30.0%
TTTACTCTAGTTAATTGTCG+TGG + chr1_3:34991786-34991805 None:intergenic 30.0%
GAAAACATCAGTCATGTTAA+CGG + chr1_3:34991830-34991849 None:intergenic 30.0%
!!! TTGTTTTTTCTCCCAAAAAC+TGG - chr1_3:34991895-34991914 Msa0116110:CDS 30.0%
!!! TGTTTTTTCTCCCAAAAACT+GGG - chr1_3:34991896-34991915 Msa0116110:CDS 30.0%
! CATTTCATATTCCCAGTTTT+TGG + chr1_3:34991910-34991929 None:intergenic 30.0%
TAAAATGAGCATGAATTTGG+TGG + chr1_3:34991936-34991955 None:intergenic 30.0%
GCATAAAATGAGCATGAATT+TGG + chr1_3:34991939-34991958 None:intergenic 30.0%
! GTTTTTCTTGATGTACACTT+AGG - chr1_3:34992021-34992040 Msa0116110:CDS 30.0%
ACAAGAGGATTCAAATCTAA+CGG + chr1_3:34992081-34992100 None:intergenic 30.0%
GTATGATACTAGATAGAAGT+TGG - chr1_3:34992245-34992264 Msa0116110:CDS 30.0%
TATAGTGAAAGTTTCTACCT+AGG + chr1_3:34992431-34992450 None:intergenic 30.0%
!!! TCAGTTTTGAACGAGAAATT+AGG + chr1_3:34992466-34992485 None:intergenic 30.0%
TCACTAACTAGTTACATCTT+AGG + chr1_3:34992955-34992974 None:intergenic 30.0%
AAGATATCCAAAGGTAATGA+AGG + chr1_3:34993138-34993157 None:intergenic 30.0%
TTCATTACCTTTGGATATCT+TGG - chr1_3:34993137-34993156 Msa0116110:intron 30.0%
TTATACTATCTCAGTTGACT+AGG + chr1_3:34993269-34993288 None:intergenic 30.0%
AGGTATACTATACAAGTGAT+GGG + chr1_3:34993368-34993387 None:intergenic 30.0%
TAGGTATACTATACAAGTGA+TGG + chr1_3:34993369-34993388 None:intergenic 30.0%
! ACATAGAAAGTTGCATGTTT+TGG + chr1_3:34993479-34993498 None:intergenic 30.0%
! TCTTTTTGTGGTTTTTATGG+GGG + chr1_3:34993709-34993728 None:intergenic 30.0%
! GTCTTTTTGTGGTTTTTATG+GGG + chr1_3:34993710-34993729 None:intergenic 30.0%
! CGTCTTTTTGTGGTTTTTAT+GGG + chr1_3:34993711-34993730 None:intergenic 30.0%
! ACGTCTTTTTGTGGTTTTTA+TGG + chr1_3:34993712-34993731 None:intergenic 30.0%
GTAAATATGTTACAACTTCG+AGG - chr1_3:34993813-34993832 Msa0116110:CDS 30.0%
GTTGTTAGGGAACAGAATAA+AGG - chr1_3:34983648-34983667 Msa0116110:intron 35.0%
GAAAGAAACCACCAAAAATG+AGG - chr1_3:34983756-34983775 Msa0116110:intron 35.0%
TTAAGTTTCTTGTGGACTTG+TGG + chr1_3:34983784-34983803 None:intergenic 35.0%
!!! CGCTGATTTTAAGTTTCTTG+TGG + chr1_3:34983792-34983811 None:intergenic 35.0%
AGAACAAACTGACACAACAT+AGG + chr1_3:34984088-34984107 None:intergenic 35.0%
GAAGAATAGTTAATCGTGGA+AGG + chr1_3:34984350-34984369 None:intergenic 35.0%
ACTATAGGAAATGAAGCGTA+AGG - chr1_3:34984413-34984432 Msa0116110:intron 35.0%
TTCTCTAAGTATCTGCTGAA+AGG - chr1_3:34984465-34984484 Msa0116110:intron 35.0%
GACTTCTTCCACATTTAAGA+CGG - chr1_3:34984487-34984506 Msa0116110:intron 35.0%
! ACGAGGTATTCCTATATAGT+CGG - chr1_3:34984554-34984573 Msa0116110:intron 35.0%
!!! GATTTTGGGATGTGAATTAC+AGG - chr1_3:34984617-34984636 Msa0116110:intron 35.0%
!! TCATCTTTAGAATAATCCGC+CGG + chr1_3:34984671-34984690 None:intergenic 35.0%
! AAGCTTGAGTATGATTTTCG+AGG - chr1_3:34984910-34984929 Msa0116110:intron 35.0%
! TCATTATCAGCTTTTGGACA+AGG + chr1_3:34985063-34985082 None:intergenic 35.0%
! GCTGATAATGAATGTGATCA+TGG - chr1_3:34985072-34985091 Msa0116110:intron 35.0%
ACTAACTCAGAGATGCAATT+TGG + chr1_3:34985126-34985145 None:intergenic 35.0%
AATCAAGCTTCAAGATGTAG+AGG - chr1_3:34985173-34985192 Msa0116110:intron 35.0%
AGTACATTGCTGACAATTAC+AGG + chr1_3:34985381-34985400 None:intergenic 35.0%
AATGTACTTGAATGCACATC+TGG - chr1_3:34985393-34985412 Msa0116110:intron 35.0%
! AACTACATCGTATTTGGAGT+TGG + chr1_3:34985466-34985485 None:intergenic 35.0%
! CTCCAAATACGATGTAGTTT+TGG - chr1_3:34985467-34985486 Msa0116110:intron 35.0%
TTTCTCAATCCTTATGATGG+AGG - chr1_3:34985535-34985554 Msa0116110:intron 35.0%
! TTCTCAATCCTTATGATGGA+GGG - chr1_3:34985536-34985555 Msa0116110:intron 35.0%
!! CGGTTTTGTAGAGTTAAGTT+AGG + chr1_3:34985647-34985666 None:intergenic 35.0%
GTTTGATAAGAGTTCCACAT+TGG + chr1_3:34985727-34985746 None:intergenic 35.0%
!!! GCCAATTTTTTGAGTGCAAT+TGG - chr1_3:34985869-34985888 Msa0116110:intron 35.0%
GCCAATTGCACTCAAAAAAT+TGG + chr1_3:34985873-34985892 None:intergenic 35.0%
! CAGCGTTTGTTGAAAATGTT+GGG + chr1_3:34985947-34985966 None:intergenic 35.0%
TTATGTATTAGGGATGGCAA+TGG - chr1_3:34986123-34986142 Msa0116110:intron 35.0%
TATGTATTAGGGATGGCAAT+GGG - chr1_3:34986124-34986143 Msa0116110:intron 35.0%
! TTTTTACAAACACGGGTATG+GGG + chr1_3:34986181-34986200 None:intergenic 35.0%
GTACCTATAGGTTATGAGAA+AGG + chr1_3:34986250-34986269 None:intergenic 35.0%
!! AGGGGATTGGTTATTGTATT+AGG - chr1_3:34986452-34986471 Msa0116110:CDS 35.0%
! AATATGTATATGCTGGTTGC+GGG - chr1_3:34986565-34986584 Msa0116110:intron 35.0%
CCTGCAAATTTAAATGGGTA+AGG + chr1_3:34986608-34986627 None:intergenic 35.0%
CCTTACCCATTTAAATTTGC+AGG - chr1_3:34986605-34986624 Msa0116110:intron 35.0%
AAAAATACCCACAATGGGTA+GGG + chr1_3:34986674-34986693 None:intergenic 35.0%
TAAAAATACCCACAATGGGT+AGG + chr1_3:34986675-34986694 None:intergenic 35.0%
!!! TATTTTTAGCGGGTATCCAT+CGG - chr1_3:34986687-34986706 Msa0116110:intron 35.0%
TGCAGTAAGTATACGTAACA+GGG + chr1_3:34986732-34986751 None:intergenic 35.0%
ATGCAGTAAGTATACGTAAC+AGG + chr1_3:34986733-34986752 None:intergenic 35.0%
ACTGCATGTTGATGTTAAGT+TGG - chr1_3:34986746-34986765 Msa0116110:intron 35.0%
! TTGAGTTGTTCATTGAATGC+AGG - chr1_3:34986905-34986924 Msa0116110:intron 35.0%
TGAGTTGTTCATTGAATGCA+GGG - chr1_3:34986906-34986925 Msa0116110:intron 35.0%
AATATCCACCAATTCTTCAC+TGG - chr1_3:34986936-34986955 Msa0116110:intron 35.0%
ATATCCACCAATTCTTCACT+GGG - chr1_3:34986937-34986956 Msa0116110:intron 35.0%
TCTTTCAATTTCAACACCTC+AGG + chr1_3:34986996-34987015 None:intergenic 35.0%
TCCTGAAATAAATCAGAAGG+AGG + chr1_3:34987023-34987042 None:intergenic 35.0%
TCAGGCTTTACACAATAATC+CGG + chr1_3:34987143-34987162 None:intergenic 35.0%
TTATTGTGTAAAGCCTGACA+TGG - chr1_3:34987145-34987164 Msa0116110:CDS 35.0%
TATTGTGTAAAGCCTGACAT+GGG - chr1_3:34987146-34987165 Msa0116110:CDS 35.0%
GTGCTAACAAAGAATTGATC+AGG + chr1_3:34987636-34987655 None:intergenic 35.0%
TAAAGTGGAACTAAAACCTG+AGG - chr1_3:34987765-34987784 Msa0116110:intron 35.0%
!! CAATTGCATTCCTTTAAAGC+AGG - chr1_3:34988020-34988039 Msa0116110:CDS 35.0%
!! TCCTTTAAAGCAGGTAGAAT+CGG - chr1_3:34988029-34988048 Msa0116110:CDS 35.0%
TTAGCAGCAGAGAAAGTAAA+TGG + chr1_3:34988100-34988119 None:intergenic 35.0%
TTCAAATACACATGCCACAA+AGG - chr1_3:34988208-34988227 Msa0116110:intron 35.0%
TGTTTCAACACAATCCTTTG+TGG + chr1_3:34988225-34988244 None:intergenic 35.0%
AAATGCATTTCCTTTCTCTC+TGG + chr1_3:34988325-34988344 None:intergenic 35.0%
! TGATTCAACCAATGACCTTT+TGG + chr1_3:34988365-34988384 None:intergenic 35.0%
!! GAGATATCCTTTGGTAATGT+AGG - chr1_3:34988454-34988473 Msa0116110:intron 35.0%
TAAATGGTCTGATCATGAAG+GGG + chr1_3:34988488-34988507 None:intergenic 35.0%
GATAAATGGTCTGATCATGA+AGG + chr1_3:34988490-34988509 None:intergenic 35.0%
!! GTTCCTTTGTTGTTTGTAGA+TGG - chr1_3:34988568-34988587 Msa0116110:CDS 35.0%
AGTCCATCTACAAACAACAA+AGG + chr1_3:34988574-34988593 None:intergenic 35.0%
TTACCTTCAGATTTCTGACT+TGG + chr1_3:34988718-34988737 None:intergenic 35.0%
! TTTCGTTAGTTTAGTCACAC+AGG - chr1_3:34988849-34988868 Msa0116110:intron 35.0%
AGTTTAGTCACACAGGATAA+TGG - chr1_3:34988856-34988875 Msa0116110:intron 35.0%
AAAGAAAGATTGGAGCTCAT+AGG + chr1_3:34988975-34988994 None:intergenic 35.0%
!! GTGCATTCTTTGTTATTCAC+CGG - chr1_3:34989131-34989150 Msa0116110:intron 35.0%
AAGGAACTGCTCGTATTTAA+CGG - chr1_3:34989172-34989191 Msa0116110:intron 35.0%
TGAAAATAAGTTCTTGTCGG+AGG + chr1_3:34989390-34989409 None:intergenic 35.0%
AACAGCAAAAACAGTACCTA+TGG - chr1_3:34989616-34989635 Msa0116110:intron 35.0%
TATAGACGTTACACACTTCT+TGG + chr1_3:34989698-34989717 None:intergenic 35.0%
! ATAAAATTTTGCTTGGAGCG+AGG - chr1_3:34989715-34989734 Msa0116110:intron 35.0%
TTTAGAGAATACAAGCACCA+AGG + chr1_3:34989807-34989826 None:intergenic 35.0%
ATGGCTTCAACAATTTGCAT+AGG + chr1_3:34989944-34989963 None:intergenic 35.0%
!! CATAGGATTAGTTTCTTGGT+TGG + chr1_3:34990318-34990337 None:intergenic 35.0%
! TTTTATATATCCTCGCTCAC+CGG - chr1_3:34990386-34990405 Msa0116110:intron 35.0%
TTGACATGATGACATAACAC+GGG + chr1_3:34990542-34990561 None:intergenic 35.0%
GTTGACATGATGACATAACA+CGG + chr1_3:34990543-34990562 None:intergenic 35.0%
! TTTTACTGATGACTGCTTCT+TGG - chr1_3:34990747-34990766 Msa0116110:intron 35.0%
!!! CTTCAGGCGTTTTTTTGTTA+TGG - chr1_3:34990850-34990869 Msa0116110:intron 35.0%
! ACTGTTCACTTTGTTGTCAA+AGG - chr1_3:34990900-34990919 Msa0116110:intron 35.0%
TGCCATTAAATTTACAGGTC+TGG - chr1_3:34991028-34991047 Msa0116110:intron 35.0%
GCCATTAAATTTACAGGTCT+GGG - chr1_3:34991029-34991048 Msa0116110:intron 35.0%
TCCCAGACCTGTAAATTTAA+TGG + chr1_3:34991033-34991052 None:intergenic 35.0%
GTATATTTACGCACAAACCT+TGG + chr1_3:34991059-34991078 None:intergenic 35.0%
TTTGTGCGTAAATATACCAG+AGG - chr1_3:34991062-34991081 Msa0116110:intron 35.0%
TTGTGCGTAAATATACCAGA+GGG - chr1_3:34991063-34991082 Msa0116110:intron 35.0%
AGAGAGAGATTGAATCCATT+TGG - chr1_3:34991086-34991105 Msa0116110:intron 35.0%
GAGAGAGATTGAATCCATTT+GGG - chr1_3:34991087-34991106 Msa0116110:intron 35.0%
TTGAGTCACTTGATTAGGTT+TGG - chr1_3:34991121-34991140 Msa0116110:intron 35.0%
!! GCACCGGTTAAAACAAAATA+TGG + chr1_3:34991183-34991202 None:intergenic 35.0%
! GTATAATGTTTCAAGTGCAC+CGG + chr1_3:34991199-34991218 None:intergenic 35.0%
AAACGTACACCAATACAAGT+CGG + chr1_3:34991223-34991242 None:intergenic 35.0%
TTACAAAACATGCTGCAACA+AGG + chr1_3:34991374-34991393 None:intergenic 35.0%
! GCAGCATGTTTTGTAAAATG+TGG - chr1_3:34991378-34991397 Msa0116110:intron 35.0%
TACTTCCCTATCCTATATTC+TGG - chr1_3:34991476-34991495 Msa0116110:intron 35.0%
GTGTCTTGTGATCTAAACAT+AGG + chr1_3:34991668-34991687 None:intergenic 35.0%
! CATTTTATGCATTTGTCGAG+AGG - chr1_3:34991949-34991968 Msa0116110:CDS 35.0%
TCAATCTAACGGTTAAGCAT+TGG + chr1_3:34992177-34992196 None:intergenic 35.0%
AACCGTTAGATTGACATGTT+TGG - chr1_3:34992183-34992202 Msa0116110:CDS 35.0%
TGCCAAACATGTCAATCTAA+CGG + chr1_3:34992188-34992207 None:intergenic 35.0%
ACAGCCAAAGTGAATGTAAT+TGG + chr1_3:34992327-34992346 None:intergenic 35.0%
TAGGTTTGAGCTAAAAGAAG+CGG + chr1_3:34992412-34992431 None:intergenic 35.0%
CAAAACTGAAGCAATTCAAG+AGG - chr1_3:34992477-34992496 Msa0116110:intron 35.0%
!! TTCAAGAGGAAGGTATTTCT+AGG - chr1_3:34992491-34992510 Msa0116110:intron 35.0%
CTCCTAAGTACTTACTACTA+GGG + chr1_3:34992898-34992917 None:intergenic 35.0%
! CTCTCAATAGTTCTACAAAC+CGG + chr1_3:34993022-34993041 None:intergenic 35.0%
AGTGTCCTAAGATTCATAGA+TGG - chr1_3:34993091-34993110 Msa0116110:intron 35.0%
GTGTCCTAAGATTCATAGAT+GGG - chr1_3:34993092-34993111 Msa0116110:intron 35.0%
TCTACCCATCTATGAATCTT+AGG + chr1_3:34993099-34993118 None:intergenic 35.0%
TGACTTTCCAAGATATCCAA+AGG + chr1_3:34993147-34993166 None:intergenic 35.0%
TAGTATAAACCCCACATGTA+AGG - chr1_3:34993281-34993300 Msa0116110:CDS 35.0%
TGGGACGTTACTAACATAAT+TGG + chr1_3:34993340-34993359 None:intergenic 35.0%
TTATGTTAGTAACGTCCCAA+CGG - chr1_3:34993341-34993360 Msa0116110:intron 35.0%
GGTATACTATACAAGTGATG+GGG + chr1_3:34993367-34993386 None:intergenic 35.0%
CTTCCCCCTATTTATTATGT+TGG + chr1_3:34993427-34993446 None:intergenic 35.0%
GGTTACAGAAAAGTAAGTAG+CGG + chr1_3:34993458-34993477 None:intergenic 35.0%
!! AGTAGAGTATCGTATCCATA+GGG + chr1_3:34993601-34993620 None:intergenic 35.0%
!! AAGTAGAGTATCGTATCCAT+AGG + chr1_3:34993602-34993621 None:intergenic 35.0%
!! ATCACCATTTTCGCCATTTT+GGG + chr1_3:34993919-34993938 None:intergenic 35.0%
ATATGAGATGTAACCTGACA+AGG + chr1_3:34994023-34994042 None:intergenic 35.0%
CGATGATCATGATCAGGAAT+GGG + chr1_3:34983265-34983284 None:intergenic 40.0%
TCGATGATCATGATCAGGAA+TGG + chr1_3:34983266-34983285 None:intergenic 40.0%
GTTTCTCGATGATCATGATC+AGG + chr1_3:34983271-34983290 None:intergenic 40.0%
TCATCGAGAAACACAACCTA+CGG - chr1_3:34983279-34983298 Msa0116110:CDS 40.0%
AAGGTGATAACATTGCAGCT+AGG - chr1_3:34983512-34983531 Msa0116110:intron 40.0%
AGGTGATAACATTGCAGCTA+GGG - chr1_3:34983513-34983532 Msa0116110:intron 40.0%
GGCAGAAAGAAAAAGAAACG+TGG - chr1_3:34983577-34983596 Msa0116110:intron 40.0%
GGAAGAAACTGGTAAAGATG+TGG - chr1_3:34983669-34983688 Msa0116110:intron 40.0%
AGGCTCTTCATCATTTCAAC+TGG - chr1_3:34983699-34983718 Msa0116110:intron 40.0%
!! TTGTGGAACCTCATTTTTGG+TGG + chr1_3:34983767-34983786 None:intergenic 40.0%
! GACTTGTGGAACCTCATTTT+TGG + chr1_3:34983770-34983789 None:intergenic 40.0%
AATCAGCGAGAGTAATGCTA+AGG - chr1_3:34983804-34983823 Msa0116110:intron 40.0%
! GGTGTTATACGCTGTAATTG+TGG - chr1_3:34983874-34983893 Msa0116110:intron 40.0%
! TTGACATTGATGGCACATTG+AGG + chr1_3:34983942-34983961 None:intergenic 40.0%
! TTTTGTGCATCTAACAACGC+TGG + chr1_3:34983978-34983997 None:intergenic 40.0%
GAAAGAGAGTGATATTGCCA+AGG - chr1_3:34984246-34984265 Msa0116110:intron 40.0%
TGCAATTATCACAGCACACA+GGG + chr1_3:34984276-34984295 None:intergenic 40.0%
TTGCAATTATCACAGCACAC+AGG + chr1_3:34984277-34984296 None:intergenic 40.0%
AATAGTTAATCGTGGAAGGG+TGG + chr1_3:34984346-34984365 None:intergenic 40.0%
! TCTTCCACATTTAAGACGGT+TGG - chr1_3:34984491-34984510 Msa0116110:intron 40.0%
TCATCCAACCGTCTTAAATG+TGG + chr1_3:34984498-34984517 None:intergenic 40.0%
TGTTCTGGTAAGGACTGATT+TGG - chr1_3:34984696-34984715 Msa0116110:intron 40.0%
! AGCATTTTGTACAGCTTCTG+TGG + chr1_3:34984819-34984838 None:intergenic 40.0%
! AGAAAGTGTATCACATGCAG+AGG - chr1_3:34984975-34984994 Msa0116110:intron 40.0%
ATGGTTTCCTTGAACTGAGA+AGG - chr1_3:34985091-34985110 Msa0116110:intron 40.0%
! GAAGTATCCTTCTCAGTTCA+AGG + chr1_3:34985101-34985120 None:intergenic 40.0%
AACTCAGAGATGCAATTTGG+AGG + chr1_3:34985123-34985142 None:intergenic 40.0%
TAGAGGAGACTCGTGATAAT+AGG - chr1_3:34985190-34985209 Msa0116110:intron 40.0%
ATATCATCGGTGTACCTAAC+AGG + chr1_3:34985231-34985250 None:intergenic 40.0%
! AATGCACATCTGGTTTAAGC+TGG - chr1_3:34985403-34985422 Msa0116110:intron 40.0%
! ATGCACATCTGGTTTAAGCT+GGG - chr1_3:34985404-34985423 Msa0116110:intron 40.0%
!!! CGATGTAGTTTTGGATGTGA+AGG - chr1_3:34985476-34985495 Msa0116110:intron 40.0%
! TCTCAATCCTTATGATGGAG+GGG - chr1_3:34985537-34985556 Msa0116110:intron 40.0%
AGGCTATATCTCATCCAATG+TGG - chr1_3:34985710-34985729 Msa0116110:intron 40.0%
!! GCACTCAAAAAATTGGCTTG+AGG + chr1_3:34985866-34985885 None:intergenic 40.0%
! GCAGCGTTTGTTGAAAATGT+TGG + chr1_3:34985948-34985967 None:intergenic 40.0%
TGCCCTTTCTCATAACCTAT+AGG - chr1_3:34986244-34986263 Msa0116110:intron 40.0%
! ATGAGCACTAAGGTACCTAT+AGG + chr1_3:34986262-34986281 None:intergenic 40.0%
CATAGTTAAAGTGCGGGTAA+TGG + chr1_3:34986293-34986312 None:intergenic 40.0%
! ATATGTATATGCTGGTTGCG+GGG - chr1_3:34986566-34986585 Msa0116110:intron 40.0%
CCGCTAAAAATACCCACAAT+GGG + chr1_3:34986679-34986698 None:intergenic 40.0%
!!! CCCATTGTGGGTATTTTTAG+CGG - chr1_3:34986676-34986695 Msa0116110:intron 40.0%
!!! CCATTGTGGGTATTTTTAGC+GGG - chr1_3:34986677-34986696 Msa0116110:intron 40.0%
!!! ATTTTTAGCGGGTATCCATC+GGG - chr1_3:34986688-34986707 Msa0116110:intron 40.0%
GTAAGTATACGTAACAGGGA+TGG + chr1_3:34986728-34986747 None:intergenic 40.0%
TTGTGTACCCAGTGAAGAAT+TGG + chr1_3:34986947-34986966 None:intergenic 40.0%
TTCTTCACTGGGTACACAAA+TGG - chr1_3:34986948-34986967 Msa0116110:intron 40.0%
GCCTCCTTCTGATTTATTTC+AGG - chr1_3:34987019-34987038 Msa0116110:intron 40.0%
AGGTTGAGAGAACCACTAAA+AGG + chr1_3:34987107-34987126 None:intergenic 40.0%
ATTGTGTAAAGCCTGACATG+GGG - chr1_3:34987147-34987166 Msa0116110:CDS 40.0%
TTTACTCAAAATCTCGGACG+CGG - chr1_3:34987194-34987213 Msa0116110:intron 40.0%
! GTTGACTCATATCGCTAAAG+TGG - chr1_3:34987750-34987769 Msa0116110:intron 40.0%
CATCATTAGTGTCAGAGAGT+TGG + chr1_3:34987882-34987901 None:intergenic 40.0%
CAACTCTCTGACACTAATGA+TGG - chr1_3:34987880-34987899 Msa0116110:CDS 40.0%
!!! GTGCTCTCTGGGATATTTTT+CGG - chr1_3:34987935-34987954 Msa0116110:CDS 40.0%
GCATCCATAGAGCTAGATAA+TGG + chr1_3:34988068-34988087 None:intergenic 40.0%
AGAAAGTAAATGGTCACGAG+GGG + chr1_3:34988090-34988109 None:intergenic 40.0%
GAGAAAGTAAATGGTCACGA+GGG + chr1_3:34988091-34988110 None:intergenic 40.0%
AGAGAAAGTAAATGGTCACG+AGG + chr1_3:34988092-34988111 None:intergenic 40.0%
GATGTAGATACCAGTCCAAA+AGG - chr1_3:34988347-34988366 Msa0116110:intron 40.0%
ATACCAGTCCAAAAGGTCAT+TGG - chr1_3:34988354-34988373 Msa0116110:intron 40.0%
AAATGGTCTGATCATGAAGG+GGG + chr1_3:34988487-34988506 None:intergenic 40.0%
CAAACCAGCAGGAATGAAAA+CGG + chr1_3:34988690-34988709 None:intergenic 40.0%
!! TTCAGATTTCTGACTTGGTG+AGG + chr1_3:34988713-34988732 None:intergenic 40.0%
TCACCAAGTCAGAAATCTGA+AGG - chr1_3:34988712-34988731 Msa0116110:CDS 40.0%
!! CTTATTTCTGTCCAGAAAGG+CGG + chr1_3:34988884-34988903 None:intergenic 40.0%
GCCTTTCTGGACAGAAATAA+GGG - chr1_3:34988883-34988902 Msa0116110:intron 40.0%
!! TCCCTTATTTCTGTCCAGAA+AGG + chr1_3:34988887-34988906 None:intergenic 40.0%
AAATAAGGGATGCCATTGCA+AGG - chr1_3:34988897-34988916 Msa0116110:intron 40.0%
AGTGCTTTATGTGACATCCA+CGG + chr1_3:34988933-34988952 None:intergenic 40.0%
GTATGCTATTGAGTATGGTG+GGG + chr1_3:34989060-34989079 None:intergenic 40.0%
CGTATGCTATTGAGTATGGT+GGG + chr1_3:34989061-34989080 None:intergenic 40.0%
TCGTATGCTATTGAGTATGG+TGG + chr1_3:34989062-34989081 None:intergenic 40.0%
AGGTCGTATGCTATTGAGTA+TGG + chr1_3:34989065-34989084 None:intergenic 40.0%
GTTAGTAAACCACAGCTTCA+AGG + chr1_3:34989085-34989104 None:intergenic 40.0%
TCTGGGAAGTAACACAAAAC+CGG + chr1_3:34989153-34989172 None:intergenic 40.0%
!!! GTTTTGTGTTACTTCCCAGA+AGG - chr1_3:34989153-34989172 Msa0116110:intron 40.0%
AAATACGAGCAGTTCCTTCT+GGG + chr1_3:34989170-34989189 None:intergenic 40.0%
TAAATACGAGCAGTTCCTTC+TGG + chr1_3:34989171-34989190 None:intergenic 40.0%
AGGAACTGCTCGTATTTAAC+GGG - chr1_3:34989173-34989192 Msa0116110:intron 40.0%
CTCGTATTTAACGGGAAATC+CGG - chr1_3:34989181-34989200 Msa0116110:intron 40.0%
GGAAATCCGGTTGTGATTAT+TGG - chr1_3:34989194-34989213 Msa0116110:intron 40.0%
AATCCGGTTGTGATTATTGG+TGG - chr1_3:34989197-34989216 Msa0116110:intron 40.0%
GAACGTAAGCCATCAGAAAT+TGG - chr1_3:34989237-34989256 Msa0116110:CDS 40.0%
TCATTGTCTGAGGAATTGGT+TGG + chr1_3:34989280-34989299 None:intergenic 40.0%
GAGGTTTATTGTGATGTCAG+CGG + chr1_3:34989371-34989390 None:intergenic 40.0%
AAGAGAATCGACACAGATAG+AGG - chr1_3:34989503-34989522 Msa0116110:intron 40.0%
AGAGAATCGACACAGATAGA+GGG - chr1_3:34989504-34989523 Msa0116110:intron 40.0%
!! CACCGTTTGATTTCCGTTTT+TGG + chr1_3:34989550-34989569 None:intergenic 40.0%
AACAGTACCTATGGTACTGT+AGG - chr1_3:34989625-34989644 Msa0116110:intron 40.0%
AAACTTGCCTACAGTACCAT+AGG + chr1_3:34989635-34989654 None:intergenic 40.0%
TCCTAATTAGTACAGCGTGA+TGG - chr1_3:34989912-34989931 Msa0116110:intron 40.0%
TTTGTCTCTCCCGAACATAT+TGG - chr1_3:34990084-34990103 Msa0116110:CDS 40.0%
AAGCACTCACCAATATGTTC+GGG + chr1_3:34990096-34990115 None:intergenic 40.0%
! GAAGCACTCACCAATATGTT+CGG + chr1_3:34990097-34990116 None:intergenic 40.0%
TGTGATTTATCGGAAGCTTG+CGG + chr1_3:34990137-34990156 None:intergenic 40.0%
GCATAACAGTATTGCTGACA+AGG - chr1_3:34990424-34990443 Msa0116110:intron 40.0%
CGGGAACATAGAACTGAAAT+TGG + chr1_3:34990523-34990542 None:intergenic 40.0%
CAATATTAGAAGCAGACACC+AGG + chr1_3:34990600-34990619 None:intergenic 40.0%
CGGGAACATAGAACTGAAAT+AGG + chr1_3:34990523-34990542 None:intergenic 40.0%
TTGACATGATGACAGAACAC+GGG + chr1_3:34990697-34990716 None:intergenic 40.0%
GTTGACATGATGACAGAACA+CGG + chr1_3:34990698-34990717 None:intergenic 40.0%
CACATCAAGCATAGCATGTA+CGG + chr1_3:34990792-34990811 None:intergenic 40.0%
GGTTAGTGATTGCAAACTTC+AGG - chr1_3:34990834-34990853 Msa0116110:intron 40.0%
!!! GCAGTTTTGTTAGTCTCTCT+AGG - chr1_3:34990957-34990976 Msa0116110:intron 40.0%
!! CATTATACGCCGACTTGTAT+TGG - chr1_3:34991211-34991230 Msa0116110:intron 40.0%
! TACCTATGGTGCTAACTATC+AGG - chr1_3:34991262-34991281 Msa0116110:intron 40.0%
AACCTGATAGTTAGCACCAT+AGG + chr1_3:34991267-34991286 None:intergenic 40.0%
TAGAGTAAATTGCACTCACC+TGG - chr1_3:34991797-34991816 Msa0116110:CDS 40.0%
! GCAAAGAAAAGCACAACAAG+AGG + chr1_3:34992096-34992115 None:intergenic 40.0%
!! TGCTCATCATGAGAAGTGTT+TGG - chr1_3:34992113-34992132 Msa0116110:CDS 40.0%
!! ATGAGAAGTGTTTGGATCCT+CGG - chr1_3:34992121-34992140 Msa0116110:CDS 40.0%
!! ATCTAACGGTTAAGCATTGG+CGG + chr1_3:34992174-34992193 None:intergenic 40.0%
AGATAGAAGTTGGATGCACA+CGG - chr1_3:34992255-34992274 Msa0116110:CDS 40.0%
AGGTTTGAGCTAAAAGAAGC+GGG + chr1_3:34992411-34992430 None:intergenic 40.0%
!!! GCTTCTTTTAGCTCAAACCT+AGG - chr1_3:34992411-34992430 Msa0116110:CDS 40.0%
ACTGAAGCAATTCAAGAGGA+AGG - chr1_3:34992481-34992500 Msa0116110:intron 40.0%
!! GAAGGTATTTCTAGGAGCTT+TGG - chr1_3:34992499-34992518 Msa0116110:intron 40.0%
GACCCTAGTAGTAAGTACTT+AGG - chr1_3:34992893-34992912 Msa0116110:intron 40.0%
CCTCCTAAGTACTTACTACT+AGG + chr1_3:34992899-34992918 None:intergenic 40.0%
CCTAGTAGTAAGTACTTAGG+AGG - chr1_3:34992896-34992915 Msa0116110:intron 40.0%
GTAAACCTAGTAGAACCTTC+CGG - chr1_3:34993000-34993019 Msa0116110:intron 40.0%
! CAATAGTTCTACAAACCGGA+AGG + chr1_3:34993018-34993037 None:intergenic 40.0%
! ATGAAGGCCAATGTTTCTGT+AGG + chr1_3:34993122-34993141 None:intergenic 40.0%
!! ACATTGGCCTTCATTACCTT+TGG - chr1_3:34993128-34993147 Msa0116110:intron 40.0%
ACAGGATGATCCTTACATGT+GGG + chr1_3:34993294-34993313 None:intergenic 40.0%
CAGAAAAGTAAGTAGCGGTT+AGG + chr1_3:34993453-34993472 None:intergenic 40.0%
! GATCACCATTTTCGCCATTT+TGG + chr1_3:34993920-34993939 None:intergenic 40.0%
AATGGCGAAAATGGTGATCT+AGG - chr1_3:34993921-34993940 Msa0116110:CDS 40.0%
ATGGCGAAAATGGTGATCTA+GGG - chr1_3:34993922-34993941 Msa0116110:CDS 40.0%
TTGATGCTCTTCTTCTTCGT+CGG - chr1_3:34993946-34993965 Msa0116110:CDS 40.0%
AGATGTAACCTGACAAGGAA+CGG + chr1_3:34994018-34994037 None:intergenic 40.0%
! GAATGGGTTCATCTGGATCA+GGG + chr1_3:34983249-34983268 None:intergenic 45.0%
! TGATCAGGAATGGGTTCATC+TGG + chr1_3:34983256-34983275 None:intergenic 45.0%
TATGCATGTTGGCGCCAAAA+CGG - chr1_3:34983453-34983472 Msa0116110:intron 45.0%
TTCATCCTCTGCTAAAGCTG+CGG - chr1_3:34983537-34983556 Msa0116110:intron 45.0%
ACTGGTAAAGATGTGGTAGC+TGG - chr1_3:34983676-34983695 Msa0116110:intron 45.0%
GCAATTGCAAAGCATGCTTG+CGG - chr1_3:34984293-34984312 Msa0116110:intron 45.0%
TAAGGCTGAAACCAACAACG+AGG - chr1_3:34984431-34984450 Msa0116110:intron 45.0%
TTGAGAAGGAAAGAGAAGCC+AGG - chr1_3:34984529-34984548 Msa0116110:intron 45.0%
TATAGGAATACCTCGTCTCC+TGG + chr1_3:34984550-34984569 None:intergenic 45.0%
CTAAAGATGAGCGTGTGTTC+TGG - chr1_3:34984681-34984700 Msa0116110:intron 45.0%
CGAGGTCGCAATTATCTACA+TGG - chr1_3:34984928-34984947 Msa0116110:intron 45.0%
GGTCGCAATTATCTACATGG+TGG - chr1_3:34984931-34984950 Msa0116110:intron 45.0%
ATGAGTCTACGATTCGTGAG+TGG - chr1_3:34984998-34985017 Msa0116110:intron 45.0%
ATTCGTGAGTGGTCAAGATC+TGG - chr1_3:34985009-34985028 Msa0116110:intron 45.0%
TTCGTGAGTGGTCAAGATCT+GGG - chr1_3:34985010-34985029 Msa0116110:intron 45.0%
TGGACAAGGAATGCTACCAT+CGG + chr1_3:34985049-34985068 None:intergenic 45.0%
GTTCTTGCTCGAAACCTGTT+AGG - chr1_3:34985214-34985233 Msa0116110:intron 45.0%
! TTTCAATGGCACTGGAGCAA+AGG - chr1_3:34985351-34985370 Msa0116110:intron 45.0%
! TTCAATGGCACTGGAGCAAA+GGG - chr1_3:34985352-34985371 Msa0116110:intron 45.0%
GTAAGAACCCCTCCATCATA+AGG + chr1_3:34985547-34985566 None:intergenic 45.0%
! TATGATGGAGGGGTTCTTAC+AGG - chr1_3:34985547-34985566 Msa0116110:intron 45.0%
TCTACAAAACCGCCTTGTGA+GGG - chr1_3:34985655-34985674 Msa0116110:intron 45.0%
GATATACATCTCCCCTCACA+AGG + chr1_3:34985670-34985689 None:intergenic 45.0%
ACTGTAGTACCCTACCCATA+GGG + chr1_3:34986152-34986171 None:intergenic 45.0%
!! TAAAGTGCGGGTAATGGATG+CGG + chr1_3:34986287-34986306 None:intergenic 45.0%
TGTATACCAACAGAGGGGAT+TGG - chr1_3:34986439-34986458 Msa0116110:CDS 45.0%
CAATAACCAATCCCCTCTGT+TGG + chr1_3:34986448-34986467 None:intergenic 45.0%
AAACCCTGCTTTCATGGCTT+CGG + chr1_3:34986649-34986668 None:intergenic 45.0%
AGGGTAAAACCCTGCTTTCA+TGG + chr1_3:34986655-34986674 None:intergenic 45.0%
! GGTTTTACCCTACCCATTGT+GGG - chr1_3:34986664-34986683 Msa0116110:intron 45.0%
CCCGCTAAAAATACCCACAA+TGG + chr1_3:34986680-34986699 None:intergenic 45.0%
TACGTAACAGGGATGGCAAT+TGG + chr1_3:34986721-34986740 None:intergenic 45.0%
AGACTGTTAGGCAGTACAAC+TGG + chr1_3:34986812-34986831 None:intergenic 45.0%
GTTGTACTGCCTAACAGTCT+CGG - chr1_3:34986812-34986831 Msa0116110:intron 45.0%
TTGTACTGCCTAACAGTCTC+GGG - chr1_3:34986813-34986832 Msa0116110:intron 45.0%
ACAATTCACCCGAGACTGTT+AGG + chr1_3:34986824-34986843 None:intergenic 45.0%
TGTACCCAGTGAAGAATTGG+TGG + chr1_3:34986944-34986963 None:intergenic 45.0%
! ATGAACTCAGCATGATGACG+AGG + chr1_3:34987053-34987072 None:intergenic 45.0%
CTGCATCAGACACATCACAA+TGG + chr1_3:34987238-34987257 None:intergenic 45.0%
AGCACCTTGAGCAAGATAAG+AGG - chr1_3:34987818-34987837 Msa0116110:CDS 45.0%
GCACCTTGAGCAAGATAAGA+GGG - chr1_3:34987819-34987838 Msa0116110:CDS 45.0%
CAAGATAAGAGGGAGCTACA+TGG - chr1_3:34987829-34987848 Msa0116110:CDS 45.0%
! CACTAATGATGGTGACCTGA+TGG - chr1_3:34987891-34987910 Msa0116110:CDS 45.0%
! AATGATGGTGACCTGATGGT+TGG - chr1_3:34987895-34987914 Msa0116110:CDS 45.0%
! GCCGATTCTACCTGCTTTAA+AGG + chr1_3:34988033-34988052 None:intergenic 45.0%
!! AACTTTTGGAGGGTTGCACT+AGG - chr1_3:34988149-34988168 Msa0116110:intron 45.0%
TGTTCAGTGACCAGAGAGAA+AGG - chr1_3:34988312-34988331 Msa0116110:intron 45.0%
! CAACCAATGACCTTTTGGAC+TGG + chr1_3:34988360-34988379 None:intergenic 45.0%
GACTTGTAGGAATTGAGCCT+TGG - chr1_3:34988639-34988658 Msa0116110:intron 45.0%
CGCCTTTCTGGACAGAAATA+AGG - chr1_3:34988882-34988901 Msa0116110:intron 45.0%
CGGTTCATTGTCTGAGGAAT+TGG + chr1_3:34989284-34989303 None:intergenic 45.0%
!! ATTCGTCGGTTCATTGTCTG+AGG + chr1_3:34989290-34989309 None:intergenic 45.0%
GTGGTTCATGAATCACGACA+TGG + chr1_3:34989333-34989352 None:intergenic 45.0%
TCGTGATTCATGAACCACTC+TGG - chr1_3:34989335-34989354 Msa0116110:CDS 45.0%
ATGATTTGACGTTAGCGCCA+TGG + chr1_3:34989432-34989451 None:intergenic 45.0%
GCCATCACGCTGTACTAATT+AGG + chr1_3:34989916-34989935 None:intergenic 45.0%
ATCAAGTGCAACCTTGATGC+AGG + chr1_3:34990064-34990083 None:intergenic 45.0%
TGCGGAATTCCTCTGTCAAA+CGG + chr1_3:34990119-34990138 None:intergenic 45.0%
GCAGCGGATCTGTGATTTAT+CGG + chr1_3:34990147-34990166 None:intergenic 45.0%
GATAAATCACAGATCCGCTG+CGG - chr1_3:34990146-34990165 Msa0116110:CDS 45.0%
! GTACGGCAATTTTCTTCACC+TGG + chr1_3:34990775-34990794 None:intergenic 45.0%
CGTACATGCTATGCTTGATG+TGG - chr1_3:34990790-34990809 Msa0116110:intron 45.0%
ATTCAATCTCTCTCTCCCTC+TGG + chr1_3:34991081-34991100 None:intergenic 45.0%
! CATGTTAACGGTGTCAATCC+AGG + chr1_3:34991818-34991837 None:intergenic 45.0%
GATCTTTAACGAGAAGCAGC+TGG + chr1_3:34991858-34991877 None:intergenic 45.0%
GGTTTGAGCTAAAAGAAGCG+GGG + chr1_3:34992410-34992429 None:intergenic 45.0%
TACTAGGGTCAACTCGCATT+CGG + chr1_3:34992883-34992902 None:intergenic 45.0%
ATTAAGGAAACACGCGACTC+TGG - chr1_3:34992974-34992993 Msa0116110:intron 45.0%
TTAAGGAAACACGCGACTCT+GGG - chr1_3:34992975-34992994 Msa0116110:intron 45.0%
ACAAACCGGAAGGTTCTACT+AGG + chr1_3:34993008-34993027 None:intergenic 45.0%
GGGTAGACCTACAGAAACAT+TGG - chr1_3:34993112-34993131 Msa0116110:intron 45.0%
CACAGTAATCCTTACGTGTG+AGG + chr1_3:34993210-34993229 None:intergenic 45.0%
AGGTATCTCCCTCCAATGTT+CGG + chr1_3:34993249-34993268 None:intergenic 45.0%
CAGGATGATCCTTACATGTG+GGG + chr1_3:34993293-34993312 None:intergenic 45.0%
CACAGGATGATCCTTACATG+TGG + chr1_3:34993295-34993314 None:intergenic 45.0%
AGGATCATCCTGTGATCAAC+AGG - chr1_3:34993301-34993320 Msa0116110:intron 45.0%
AGACGAAACGACAATCCCTA+TGG - chr1_3:34993583-34993602 Msa0116110:CDS 45.0%
CGCCCTATGTAGAATCTCAA+CGG - chr1_3:34993676-34993695 Msa0116110:CDS 45.0%
CGCCGTTGAGATTCTACATA+GGG + chr1_3:34993681-34993700 None:intergenic 45.0%
ACGCCGTTGAGATTCTACAT+AGG + chr1_3:34993682-34993701 None:intergenic 45.0%
GTGTACTACAGCTCCCAAAA+TGG - chr1_3:34993903-34993922 Msa0116110:CDS 45.0%
AGCTCCCAAAATGGCGAAAA+TGG - chr1_3:34993912-34993931 Msa0116110:CDS 45.0%
CAAGGAACGGCAAATAAGAG+AGG + chr1_3:34994005-34994024 None:intergenic 45.0%
CTTATTTGCCGTTCCTTGTC+AGG - chr1_3:34994007-34994026 Msa0116110:CDS 45.0%
! GGAATGGGTTCATCTGGATC+AGG + chr1_3:34983250-34983269 None:intergenic 50.0%
ACACAACCTACGGCCAATGT+TGG - chr1_3:34983289-34983308 Msa0116110:CDS 50.0%
ATCCTCCAACGGTACCGTTT+CGG + chr1_3:34983317-34983336 None:intergenic 50.0%
AGCTGAAACGTCGTCGTTGA+AGG - chr1_3:34983366-34983385 Msa0116110:intron 50.0%
GTCGAAGGACGATGAAGGTT+CGG - chr1_3:34983486-34983505 Msa0116110:intron 50.0%
! GACGATGAAGGTTCGGTTGA+AGG - chr1_3:34983493-34983512 Msa0116110:intron 50.0%
!! AGGGATGCAGAAGCGTTGTT+AGG - chr1_3:34983634-34983653 Msa0116110:intron 50.0%
!! GGGATGCAGAAGCGTTGTTA+GGG - chr1_3:34983635-34983654 Msa0116110:intron 50.0%
GGTAAAGATGTGGTAGCTGG+AGG - chr1_3:34983679-34983698 Msa0116110:intron 50.0%
CAACTGGTGAGAAAGAGACG+CGG - chr1_3:34983715-34983734 Msa0116110:intron 50.0%
TGAAACCAACAACGAGGAGG+AGG - chr1_3:34984437-34984456 Msa0116110:intron 50.0%
GATGAGCGTGTGTTCTGGTA+AGG - chr1_3:34984686-34984705 Msa0116110:intron 50.0%
TGGTGTAGATCTACAGCCCT+TGG + chr1_3:34985315-34985334 None:intergenic 50.0%
AGGGCTGTAGATCTACACCA+TGG - chr1_3:34985315-34985334 Msa0116110:intron 50.0%
! TCAATGGCACTGGAGCAAAG+GGG - chr1_3:34985353-34985372 Msa0116110:intron 50.0%
AATGCACGCCACATGACTAG+TGG + chr1_3:34985432-34985451 None:intergenic 50.0%
CTCTACAAAACCGCCTTGTG+AGG - chr1_3:34985654-34985673 Msa0116110:intron 50.0%
CTACAAAACCGCCTTGTGAG+GGG - chr1_3:34985656-34985675 Msa0116110:intron 50.0%
ATACATCTCCCCTCACAAGG+CGG + chr1_3:34985667-34985686 None:intergenic 50.0%
GATGGCAATGGGTACCCTAT+GGG - chr1_3:34986135-34986154 Msa0116110:intron 50.0%
CAATGGGTACCCTATGGGTA+GGG - chr1_3:34986140-34986159 Msa0116110:intron 50.0%
CACTGTAGTACCCTACCCAT+AGG + chr1_3:34986153-34986172 None:intergenic 50.0%
ACAAACACGGGTATGGGGAA+GGG + chr1_3:34986176-34986195 None:intergenic 50.0%
TACAAACACGGGTATGGGGA+AGG + chr1_3:34986177-34986196 None:intergenic 50.0%
AGTTGTTGCCCACGAGGATA+CGG + chr1_3:34986220-34986239 None:intergenic 50.0%
CACTAAAGTTGTTGCCCACG+AGG + chr1_3:34986226-34986245 None:intergenic 50.0%
!! AAAGTGCGGGTAATGGATGC+GGG + chr1_3:34986286-34986305 None:intergenic 50.0%
! GCTTTCATGGCTTCGGGTTT+GGG + chr1_3:34986642-34986661 None:intergenic 50.0%
! TGCTTTCATGGCTTCGGGTT+TGG + chr1_3:34986643-34986662 None:intergenic 50.0%
AAACCCGAAGCCATGAAAGC+AGG - chr1_3:34986642-34986661 Msa0116110:intron 50.0%
AACCCGAAGCCATGAAAGCA+GGG - chr1_3:34986643-34986662 Msa0116110:intron 50.0%
AACCCTGCTTTCATGGCTTC+GGG + chr1_3:34986648-34986667 None:intergenic 50.0%
! GGGTTTTACCCTACCCATTG+TGG - chr1_3:34986663-34986682 Msa0116110:intron 50.0%
ACACAAATGGTCGCAGCGAT+TGG - chr1_3:34986961-34986980 Msa0116110:intron 50.0%
!! GTCGCAGCGATTGGCTTAAA+TGG - chr1_3:34986970-34986989 Msa0116110:intron 50.0%
!! CGATTGGCTTAAATGGCCTG+AGG - chr1_3:34986977-34986996 Msa0116110:intron 50.0%
! CAACCTTGCTGTGAAGTTGC+CGG - chr1_3:34987121-34987140 Msa0116110:CDS 50.0%
AATCCGGCAACTTCACAGCA+AGG + chr1_3:34987127-34987146 None:intergenic 50.0%
TATGTTCTTGGCCCCATGTC+AGG + chr1_3:34987161-34987180 None:intergenic 50.0%
GCTCCCTCTTATCTTGCTCA+AGG + chr1_3:34987825-34987844 None:intergenic 50.0%
AAGAGGGAGCTACATGGTGA+TGG - chr1_3:34987835-34987854 Msa0116110:CDS 50.0%
AGAGGGAGCTACATGGTGAT+GGG - chr1_3:34987836-34987855 Msa0116110:CDS 50.0%
GTTGGAGAGGATCCCTTAGA+AGG - chr1_3:34987913-34987932 Msa0116110:CDS 50.0%
!! ATCCCTTAGAAGGTGCTCTC+TGG - chr1_3:34987923-34987942 Msa0116110:CDS 50.0%
!! TCCCTTAGAAGGTGCTCTCT+GGG - chr1_3:34987924-34987943 Msa0116110:CDS 50.0%
!! TCCCAGAGAGCACCTTCTAA+GGG + chr1_3:34987928-34987947 None:intergenic 50.0%
!! ATCCCAGAGAGCACCTTCTA+AGG + chr1_3:34987929-34987948 None:intergenic 50.0%
!!! GATGCCGTTTTCATTCCTGC+TGG - chr1_3:34988683-34988702 Msa0116110:intron 50.0%
! GGATAATGGTACCGCCTTTC+TGG - chr1_3:34988870-34988889 Msa0116110:intron 50.0%
! AGTATGGTGGGGTTGGAGAT+AGG + chr1_3:34989049-34989068 None:intergenic 50.0%
! GCTATTGAGTATGGTGGGGT+TGG + chr1_3:34989056-34989075 None:intergenic 50.0%
AGCATACGACCTTGAAGCTG+TGG - chr1_3:34989073-34989092 Msa0116110:intron 50.0%
CCGCCACCAATAATCACAAC+CGG + chr1_3:34989203-34989222 None:intergenic 50.0%
CCGGTTGTGATTATTGGTGG+CGG - chr1_3:34989200-34989219 Msa0116110:intron 50.0%
TGTGATGTCAGCGGCGAATA+GGG + chr1_3:34989362-34989381 None:intergenic 50.0%
TTGTGATGTCAGCGGCGAAT+AGG + chr1_3:34989363-34989382 None:intergenic 50.0%
AGTTTCAGAACCGACGACCA+TGG - chr1_3:34989412-34989431 Msa0116110:CDS 50.0%
TCTGTTGCAGTCCTGCATCA+AGG - chr1_3:34990050-34990069 Msa0116110:CDS 50.0%
TGAGTGCTTCCGTTTGACAG+AGG - chr1_3:34990107-34990126 Msa0116110:CDS 50.0%
AACCTCAAACTTGTCCGCAG+CGG + chr1_3:34990163-34990182 None:intergenic 50.0%
TATATATCCTCGCTCACCGG+AGG - chr1_3:34990389-34990408 Msa0116110:intron 50.0%
ATATATCCTCGCTCACCGGA+GGG - chr1_3:34990390-34990409 Msa0116110:intron 50.0%
GATGACTGCTTCTTGGTACC+AGG - chr1_3:34990754-34990773 Msa0116110:intron 50.0%
TTACAGGTCTGGGAAAGCCA+AGG - chr1_3:34991039-34991058 Msa0116110:intron 50.0%
TAAGGAAACACGCGACTCTG+GGG - chr1_3:34992976-34992995 Msa0116110:intron 50.0%
GTGAGGTCTTACCACCTCAA+AGG + chr1_3:34993193-34993212 None:intergenic 50.0%
GTGGTAAGACCTCACACGTA+AGG - chr1_3:34993198-34993217 Msa0116110:intron 50.0%
AGGATTACTGTGTGACCAGC+AGG - chr1_3:34993218-34993237 Msa0116110:intron 50.0%
AGGTGCAACCGAACATTGGA+GGG - chr1_3:34993238-34993257 Msa0116110:CDS 50.0%
AAGCTGCACCTGTTGATCAC+AGG + chr1_3:34993312-34993331 None:intergenic 50.0%
TGTGATCAACAGGTGCAGCT+TGG - chr1_3:34993311-34993330 Msa0116110:intron 50.0%
! ATACAAGTGATGGGGCCGTT+GGG + chr1_3:34993359-34993378 None:intergenic 50.0%
! TATACAAGTGATGGGGCCGT+TGG + chr1_3:34993360-34993379 None:intergenic 50.0%
!! AGGGCGTTGATGTGTGGATT+AGG + chr1_3:34993662-34993681 None:intergenic 50.0%
!! CTACATAGGGCGTTGATGTG+TGG + chr1_3:34993668-34993687 None:intergenic 50.0%
AGGGTGCACGAGAAACTCAT+AGG - chr1_3:34993761-34993780 Msa0116110:CDS 50.0%
GGGTGCACGAGAAACTCATA+GGG - chr1_3:34993762-34993781 Msa0116110:CDS 50.0%
GGGTTCATCTGGATCAGGGA+GGG + chr1_3:34983245-34983264 None:intergenic 55.0%
TGGGTTCATCTGGATCAGGG+AGG + chr1_3:34983246-34983265 None:intergenic 55.0%
TACCGTTTCGGCGCCAACAT+TGG + chr1_3:34983305-34983324 None:intergenic 55.0%
GAAACGGTACCGTTGGAGGA+TGG - chr1_3:34983316-34983335 Msa0116110:CDS 55.0%
GGTGACGTGGCACAAGCTAT+CGG - chr1_3:34983337-34983356 Msa0116110:intron 55.0%
GTGGCACAAGCTATCGGTGT+TGG - chr1_3:34983343-34983362 Msa0116110:intron 55.0%
! GGACGATGAACGTGATGACG+TGG - chr1_3:34983387-34983406 Msa0116110:intron 55.0%
! CGATGAACGTGATGACGTGG+TGG - chr1_3:34983390-34983409 Msa0116110:intron 55.0%
TCGCTGTCGAAGGACGATGA+AGG - chr1_3:34983481-34983500 Msa0116110:intron 55.0%
ATCCTCTGCTAAAGCTGCGG+CGG - chr1_3:34983540-34983559 Msa0116110:intron 55.0%
GCGGCGGCGATAATGAAATG+CGG - chr1_3:34983556-34983575 Msa0116110:intron 55.0%
GAGACGCGGCAGAAAGAGAA+AGG - chr1_3:34983729-34983748 Msa0116110:intron 55.0%
ACGCGGCAGAAAGAGAAAGG+CGG - chr1_3:34983732-34983751 Msa0116110:intron 55.0%
GGCTGAAACCAACAACGAGG+AGG - chr1_3:34984434-34984453 Msa0116110:intron 55.0%
CTCAACCTCCTCCTCGTTGT+TGG + chr1_3:34984445-34984464 None:intergenic 55.0%
GAAAGAGAAGCCAGGAGACG+AGG - chr1_3:34984537-34984556 Msa0116110:intron 55.0%
CGCAGCAACAGAGGAGACAA+AGG + chr1_3:34984849-34984868 None:intergenic 55.0%
CACCTAGAAGCTTCCCACCA+CGG + chr1_3:34984876-34984895 None:intergenic 55.0%
GTGAGTGGTCAAGATCTGGG+TGG - chr1_3:34985013-34985032 Msa0116110:intron 55.0%
GCTGGGAACCACTAGTCATG+TGG - chr1_3:34985421-34985440 Msa0116110:intron 55.0%
GGATGGCAATGGGTACCCTA+TGG - chr1_3:34986134-34986153 Msa0116110:intron 55.0%
GCAATGGGTACCCTATGGGT+AGG - chr1_3:34986139-34986158 Msa0116110:intron 55.0%
GTTGTTGCCCACGAGGATAC+GGG + chr1_3:34986219-34986238 None:intergenic 55.0%
GGATGCGGGTATGAGCACTA+AGG + chr1_3:34986272-34986291 None:intergenic 55.0%
! TATATGCTGGTTGCGGGGCT+GGG - chr1_3:34986571-34986590 Msa0116110:intron 55.0%
CAGGGATGGCAATTGGAACC+AGG + chr1_3:34986714-34986733 None:intergenic 55.0%
! GAGGGAGCTACATGGTGATG+GGG - chr1_3:34987837-34987856 Msa0116110:CDS 55.0%
TGGTGACCTGATGGTTGGAG+AGG - chr1_3:34987900-34987919 Msa0116110:CDS 55.0%
AGGGATCCTCTCCAACCATC+AGG + chr1_3:34987909-34987928 None:intergenic 55.0%
! ACTTGGTGAGGCAAACCAGC+AGG + chr1_3:34988701-34988720 None:intergenic 55.0%
GGTGAGAGCAAGCCTTGCAA+TGG + chr1_3:34988912-34988931 None:intergenic 55.0%
!! GGTGGCGGTGCTACTTGAAT+TGG - chr1_3:34989215-34989234 Msa0116110:CDS 55.0%
GAACCGACGAATTGCGTCAC+CGG - chr1_3:34989298-34989317 Msa0116110:CDS 55.0%
GTTCCGGTGACGCAATTCGT+CGG + chr1_3:34989304-34989323 None:intergenic 55.0%
CACGACATGGCTGAGTGTTC+CGG + chr1_3:34989320-34989339 None:intergenic 55.0%
ATCCGCTGCGGACAAGTTTG+AGG - chr1_3:34990158-34990177 Msa0116110:CDS 55.0%
ATGCAAGCACACTTGCCCTC+CGG + chr1_3:34990408-34990427 None:intergenic 55.0%
CAATGTTCGGTTGCACCTGC+TGG + chr1_3:34993236-34993255 None:intergenic 55.0%
CAGCAGGTGCAACCGAACAT+TGG - chr1_3:34993234-34993253 Msa0116110:CDS 55.0%
CAGGTGCAACCGAACATTGG+AGG - chr1_3:34993237-34993256 Msa0116110:CDS 55.0%
! GGCCAATGTTGGCGCCGAAA+CGG - chr1_3:34983300-34983319 Msa0116110:CDS 60.0%
! ACCGTTGGAGGATGGTGACG+TGG - chr1_3:34983324-34983343 Msa0116110:intron 60.0%
GCCACGTCACCATCCTCCAA+CGG + chr1_3:34983328-34983347 None:intergenic 60.0%
GCATGTTGGCGCCAAAACGG+TGG - chr1_3:34983456-34983475 Msa0116110:intron 60.0%
! CGACAGCGACACCACCGTTT+TGG + chr1_3:34983470-34983489 None:intergenic 60.0%
!! AACGGTGGTGTCGCTGTCGA+AGG - chr1_3:34983471-34983490 Msa0116110:intron 60.0%
ACAGCACACAGGGCATGCCT+TGG + chr1_3:34984266-34984285 None:intergenic 60.0%
! CTCCGTGGTGGGAAGCTTCT+AGG - chr1_3:34984871-34984890 Msa0116110:intron 60.0%
! CGTGGTGGGAAGCTTCTAGG+TGG - chr1_3:34984874-34984893 Msa0116110:intron 60.0%
GGGTGGCATGCAAATGCCGA+TGG - chr1_3:34985030-34985049 Msa0116110:intron 60.0%
! GTATATGCTGGTTGCGGGGC+TGG - chr1_3:34986570-34986589 Msa0116110:intron 60.0%
! ATGGCTTCGGGTTTGGGTCC+GGG + chr1_3:34986636-34986655 None:intergenic 60.0%
! CATGGCTTCGGGTTTGGGTC+CGG + chr1_3:34986637-34986656 None:intergenic 60.0%
GCAATTGGAACCAGGCCCGA+TGG + chr1_3:34986706-34986725 None:intergenic 60.0%
!! GGAGCTACATGGTGATGGGG+AGG - chr1_3:34987840-34987859 Msa0116110:CDS 60.0%
!! GCTACATGGTGATGGGGAGG+CGG - chr1_3:34987843-34987862 Msa0116110:CDS 60.0%
! TGCAAGGCTTGCTCTCACCG+TGG - chr1_3:34988913-34988932 Msa0116110:intron 60.0%
GACGTTAGCGCCATGGTCGT+CGG + chr1_3:34989425-34989444 None:intergenic 60.0%
TGCACACATGCATGCTGCCG+AGG + chr1_3:34992141-34992160 None:intergenic 60.0%
TCGGCGCCAACATTGGCCGT+AGG + chr1_3:34983298-34983317 None:intergenic 65.0%
! TGGCGCCGAAACGGTACCGT+TGG - chr1_3:34983309-34983328 Msa0116110:CDS 65.0%
CGCCGAAACGGTACCGTTGG+AGG - chr1_3:34983312-34983331 Msa0116110:CDS 65.0%
CACGGAGCTCGCAGCAACAG+AGG + chr1_3:34984858-34984877 None:intergenic 65.0%
CTCTGTTGCTGCGAGCTCCG+TGG - chr1_3:34984856-34984875 Msa0116110:intron 65.0%
TGTTGCTGCGAGCTCCGTGG+TGG - chr1_3:34984859-34984878 Msa0116110:intron 65.0%
GTTGCTGCGAGCTCCGTGGT+GGG - chr1_3:34984860-34984879 Msa0116110:intron 65.0%
TGCCCAAGCCCGTATCCTCG+TGG - chr1_3:34986208-34986227 Msa0116110:intron 65.0%
GCCCAAGCCCGTATCCTCGT+GGG - chr1_3:34986209-34986228 Msa0116110:intron 65.0%
GCCCACGAGGATACGGGCTT+GGG + chr1_3:34986213-34986232 None:intergenic 65.0%
TGCCCACGAGGATACGGGCT+TGG + chr1_3:34986214-34986233 None:intergenic 65.0%
! TAGCGGGTATCCATCGGGCC+TGG - chr1_3:34986693-34986712 Msa0116110:intron 65.0%
GCGGCGAATAGGGTCCAGAG+TGG + chr1_3:34989352-34989371 None:intergenic 65.0%
! CGCCGCCGCAGCTTTAGCAG+AGG + chr1_3:34983545-34983564 None:intergenic 70.0%
CACTTGCCCTCCGGTGAGCG+AGG + chr1_3:34990399-34990418 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 34983181 34994070 34983181 ID=Msa0116110;Name=Msa0116110
chr1_3 mRNA 34983181 34994070 34983181 ID=Msa0116110-mRNA-1;Parent=Msa0116110;Name=Msa0116110-mRNA-1;_AED=0.40;_eAED=0.42;_QI=0|0.16|0.15|0.84|1|1|13|0|1031
chr1_3 exon 34993426 34994070 34993426 ID=Msa0116110-mRNA-1:exon:11229;Parent=Msa0116110-mRNA-1
chr1_3 exon 34993226 34993318 34993226 ID=Msa0116110-mRNA-1:exon:11228;Parent=Msa0116110-mRNA-1
chr1_3 exon 34992693 34992831 34992693 ID=Msa0116110-mRNA-1:exon:11227;Parent=Msa0116110-mRNA-1
chr1_3 exon 34992549 34992612 34992549 ID=Msa0116110-mRNA-1:exon:11226;Parent=Msa0116110-mRNA-1
chr1_3 exon 34991727 34992465 34991727 ID=Msa0116110-mRNA-1:exon:11225;Parent=Msa0116110-mRNA-1
chr1_3 exon 34989995 34990324 34989995 ID=Msa0116110-mRNA-1:exon:11224;Parent=Msa0116110-mRNA-1
chr1_3 exon 34989210 34989509 34989210 ID=Msa0116110-mRNA-1:exon:11223;Parent=Msa0116110-mRNA-1
chr1_3 exon 34988703 34988775 34988703 ID=Msa0116110-mRNA-1:exon:11222;Parent=Msa0116110-mRNA-1
chr1_3 exon 34988518 34988603 34988518 ID=Msa0116110-mRNA-1:exon:11221;Parent=Msa0116110-mRNA-1
chr1_3 exon 34987789 34988079 34987789 ID=Msa0116110-mRNA-1:exon:11220;Parent=Msa0116110-mRNA-1
chr1_3 exon 34987072 34987191 34987072 ID=Msa0116110-mRNA-1:exon:11219;Parent=Msa0116110-mRNA-1
chr1_3 exon 34986417 34986475 34986417 ID=Msa0116110-mRNA-1:exon:11218;Parent=Msa0116110-mRNA-1
chr1_3 exon 34983181 34983337 34983181 ID=Msa0116110-mRNA-1:exon:11217;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34993426 34994070 34993426 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34993226 34993318 34993226 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34992693 34992831 34992693 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34992549 34992612 34992549 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34991727 34992465 34991727 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34989995 34990324 34989995 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34989210 34989509 34989210 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34988703 34988775 34988703 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34988518 34988603 34988518 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34987789 34988079 34987789 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34987072 34987191 34987072 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34986417 34986475 34986417 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
chr1_3 CDS 34983181 34983337 34983181 ID=Msa0116110-mRNA-1:cds;Parent=Msa0116110-mRNA-1
Gene Sequence

>Msa0116110

ATGGCGGAGGAAGAGAACAACGACATAGTCACATATATTGTGAAAATCAAAGTCACACTCACCCTCCCTGATCCAGATGAACCCATTCCTGATCATGATCATCGAGAAACACAACCTACGGCCAATGTTGGCGCCGAAACGGTACCGTTGGAGGATGGTGACGTGGCACAAGCTATCGGTGTTGGAGCTGAAACGTCGTCGTTGAAGGACGATGAACGTGATGACGTGGTGGAAGCAGCTGAAGAATCTATTCCTGATCGAGAAAAACAAGATATGCATGTTGGCGCCAAAACGGTGGTGTCGCTGTCGAAGGACGATGAAGGTTCGGTTGAAGGTGATAACATTGCAGCTAGGGATTCATCCTCTGCTAAAGCTGCGGCGGCGATAATGAAATGCGGCAGAAAGAAAAAGAAACGTGGAAGAAAGAGTTTTGCAGAAATTGAAAAGATGAAGAGGGATGCAGAAGCGTTGTTAGGGAACAGAATAAAGGAAGAAACTGGTAAAGATGTGGTAGCTGGAGGCTCTTCATCATTTCAACTGGTGAGAAAGAGACGCGGCAGAAAGAGAAAGGCGGAGAAAGAAACCACCAAAAATGAGGTTCCACAAGTCCACAAGAAACTTAAAATCAGCGAGAGTAATGCTAAGGGGTTTCCTCAATGTGCCATCAATGTCAAAGAAATGACAGGGCCAGCGTTGTTAGATGCACAAAATGCAAACGGAAAAGATTTTGCACATCATGAAATGAAGCGTAAGGCTGAAACCAACAACGAGGAGGAGGTTGAGTTCTCTAAGTATCTGCTGAAAGGACTTCTTCCACATTTAAGACGGTTGGATGAAGAACAAATGATTGAGAAGGAAAGAGAAGCCAGGAGACGAGGGCTCTCACTCTCAAAGCTAAATATAAAACCGGCGGATTATTCTAAAGATGAGCGTGTGTTCTGTGACAACTGTAAAACATCAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACCTTTGTCTCCTCTGTTGCTGCGAGCTCCGTGGTGGGAAGCTTCTAGGTGGTGCAGATCCAATTAAGCTTGAGTATGATTTTCGAGGTCGCAATTATCTACATGGTGGAAATGAAGAAAAACATGTTAAAGAAAGTGTATCACATGCAGAGGATGAGTCTACGATTCGTGAGTGGTCAAGATCTGGGTGGCATGCAAATGCCGATGGTAGCATTCCTTGTCCAAAAGCTGATAATGAATGTGATCATGGTTTCCTTGAACTGAGAAGGATACTTCCTCCAAATTGCATCTCTGAGTTAGTTTGTAAAGCAAACAAACTTGCAGAAACAATCAAGCTTCAAGATGTAGAGGAGACTCGTGATAATAGGTGTTCTTGCTCGAAACCTGTTAGGTACACCGATGATATACACAATAACACAAGGAAGGCAGCTTTTCATGAAGATTCAAGTGACAAATTTTTATACTGTCCAAGGGCTGTAGATCTACACCATGGAGATTTAAAACATTTTCAATGGCACTGGAGCAAAGGGGAGCCTGTAATTGTCAGCAATGTACTTGAATGCACATCTGGTTTAAGCTGGGAACCACTAGTCATGTGGCGTGCATTCCGTCAAATAACCAACTCCAAATACGATGTAGTTTTGGATGTGAAGGCAGTTAATTGTTTAGATTGGTGTGAGGGAGATATTAATATCCACCAATTCTTCACTGGGTACACAAATGGTCGCAGCGATTGGCTTAAATGGCCTGAGGTGTTGAAATTGAAAGATTGGCCTCCTTCTGATTTATTTCAGGAACTTTTACCTCGTCATCATGCTGAGTTCATATCTTCCTTGCCTTATAAAGAATACACAAATCCTTTTAGTGGTTCTCTCAACCTTGCTGTGAAGTTGCCGGATTATTGTGTAAAGCCTGACATGGGGCCAAGAACATATATTGCTTATGGATTTACTCAAAATCTCGGACGCGGTGATTCTGTGACTAAGCTCCATTGTGATGTGTCTGATGCAGTAAATGTGTTGACTCATATCGCTAAAGTGGAACTAAAACCTGAGGAAATTAGTGTCATTAAGAAATTGACACGTAAGCACCTTGAGCAAGATAAGAGGGAGCTACATGGTGATGGGGAGGCGGTTGATATGTTTCACCAACTCTCTGACACTAATGATGGTGACCTGATGGTTGGAGAGGATCCCTTAGAAGGTGCTCTCTGGGATATTTTTCGGAGAGAAGATGTACCCAAATTGAAAGAATATCTAGAGAAGCATTTCAGAGAGTTCAGACATGTCAATTGCATTCCTTTAAAGCAGGTTATTGACCCCCTTCATGATCAGACCATTTATCTGAATATGGAGCATAAGATGAAACTTAAGAAAGAGTATGGAATTGAGCCTTGGACTTTTATTCAGAAGTTGGGAGATGCCGTTTTCATTCCTGCTGGTTTGCCTCACCAAGTCAGAAATCTGAAGAAGGAACTGCTCGTATTTAACGGGAAATCCGGTTGTGATTATTGGTGGCGGTGCTACTTGAATTGGAACGTAAGCCATCAGAAATTGGTGAATTACAAACGGTTTCCAACCAATTCCTCAGACAATGAACCGACGAATTGCGTCACCGGAACACTCAGCCATGTCGTGATTCATGAACCACTCTGGACCCTATTCGCCGCTGACATCACAATAAACCTCCGACAAGAACTTATTTTCAACAGTTTCAGAACCGACGACCATGGCGCTAACGTCAAATCATCAGCCATGATTTCCTGCATCAAGGTTGCACTTGATTTTGTCTCTCCCGAACATATTGGTGAGTGCTTCCGTTTGACAGAGGAATTCCGCAAGCTTCCGATAAATCACAGATCCGCTGCGGACAAGTTTGAGGTGAAGAAAATTGCCGTACATGCTATGCTTGATGTGGTTGAAAAATTAGAGAAAGCAAGCTCCCAAAATGGCGAAAATGGTGATCTAGGGTTTGATGCTCTTCTTCTTCGTCGGCTCATCGATTCTTCATCTATTCCACAATTTTTTCCTCTCTTATTTGCCGTTCCTTGTCAGGTTACATCTCATATCAAATTTGGTTTTGAATTTCGTTTGTAA
Protein sequence

>Msa0116110

MAEEENNDIVTYIVKIKVTLTLPDPDEPIPDHDHRETQPTANVGAETVPLEDGDVAQAIGVGAETSSLKDDERDDVVEAAEESIPDREKQDMHVGAKTVVSLSKDDEGSVEGDNIAARDSSSAKAAAAIMKCGRKKKKRGRKSFAEIEKMKRDAEALLGNRIKEETGKDVVAGGSSSFQLVRKRRGRKRKAEKETTKNEVPQVHKKLKISESNAKGFPQCAINVKEMTGPALLDAQNANGKDFAHHEMKRKAETNNEEEVEFSKYLLKGLLPHLRRLDEEQMIEKEREARRRGLSLSKLNIKPADYSKDERVFCDNCKTSIFDYHRSCTKCSFDLCLLCCCELRGGKLLGGADPIKLEYDFRGRNYLHGGNEEKHVKESVSHAEDESTIREWSRSGWHANADGSIPCPKADNECDHGFLELRRILPPNCISELVCKANKLAETIKLQDVEETRDNRCSCSKPVRYTDDIHNNTRKAAFHEDSSDKFLYCPRAVDLHHGDLKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRQITNSKYDVVLDVKAVNCLDWCEGDINIHQFFTGYTNGRSDWLKWPEVLKLKDWPPSDLFQELLPRHHAEFISSLPYKEYTNPFSGSLNLAVKLPDYCVKPDMGPRTYIAYGFTQNLGRGDSVTKLHCDVSDAVNVLTHIAKVELKPEEISVIKKLTRKHLEQDKRELHGDGEAVDMFHQLSDTNDGDLMVGEDPLEGALWDIFRREDVPKLKEYLEKHFREFRHVNCIPLKQVIDPLHDQTIYLNMEHKMKLKKEYGIEPWTFIQKLGDAVFIPAGLPHQVRNLKKELLVFNGKSGCDYWWRCYLNWNVSHQKLVNYKRFPTNSSDNEPTNCVTGTLSHVVIHEPLWTLFAADITINLRQELIFNSFRTDDHGANVKSSAMISCIKVALDFVSPEHIGECFRLTEEFRKLPINHRSAADKFEVKKIAVHAMLDVVEKLEKASSQNGENGDLGFDALLLRRLIDSSSIPQFFPLLFAVPCQVTSHIKFGFEFRL*